Cp4.1LG18g02490 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TACTTTTGTGGTGATTTATTGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTTAATGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTCAATGACTATTGTTGATCTTGTTCTGTTCGTCAATTAGTGACATTCTATGTACCGACACTTTTCTGATTTGGATTTGATGTTACTTTTTTTGGTATAAAATTTCTGCATTACAATGAATTTTGTGGAGCTATCTTGTTTGATAAGCTTATTTGTTTCTTGTCACGGAGTTTCTATGGTTATCATTGAAGGCAAAAGATGAAAAAATACATGGATAATCAAGAGCTGGGATCTCATTTTTTTCCTTCTTTTATTTTTTAAATGGGATCTCAAAGTGTTGAACAAATGTTGTTCTTTGTTTGAGGGCTCTAGTGAAAAGGAGTCGAGCCTCGATTAAAGGTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGTATGGAAACCTTCCCCTAGCAAACGTGTTTTAAAGCCTTGAGGGGAAACCCAAGAGGGAAAGCTCAAATAGGACAATATTTGGTAGAGATGGATCTGAGCCGTTACAAATGGTATTAGAGTCAGACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAAGGGGTAGGCACGAGACGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGAGGGGTGGATTGTGATGTCCCTCATTGGTTGGGGAAGAGAACAAAACTCCCTTTATAAGGGTATGAAAACCTTCCCTTGAGGGGAAGGTGTGATGTCCCACATGAGGAGAACAAAACACCCTTTGTAAGGGTATGAAAACCTTCCCCTGGCATATGCGTTTTAAAGCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTTGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAACGAGGAGGCTGTTCCCCAAAAGGGTAGGCACGAGACAGTGTGCCAGTAAGGACATTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGAGAACAAAATACCCTTCCCCTGGCATATGCGTTTTAAACCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAACGAGGAGGCTGTTCCCCAAAAGGGTAGGCACGAGACAGTGTGCCAGTAAGGACATTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGAGAACAAAATACCCTTCCCCTGGCATATGCGTTTTAAACCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAAGGGGTAGGCACGAGACAGTGTGCCAGTAAGGACGTTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGAGAACAAAATACCCTTCCCCTGGCATATGCGTTTTAAACCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAAGGGGTAGGCACGAGACAGTGTGCCAGTAAGGACGTTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGGAGAACAAAATACTCTTTATAAGGGTATGGAAACCTTCCCCTAGCAGACGCGTTTAAACCCTTGAGGGAAAGCCAAAAAAGGACAATATTTGCTAACGGTGGATTTGGGCCATTACAAAGGGAAAACTATCCGAGGGCTCTATGGTGTACTAAGTTGGTTTTCTAGTTCCGTGTATTTACTGTTAACTCATTGCATATGGATTTTGAATGAAATCCATTACAAAAACACAAAATCTGTTAATTTTCCAACATGTTTGTGATTGTGTTTTATCTGCAAAATTGTTTTCTTTCAAGAAATGACCAAATGGAACCATTTCTGCTTTAGCTGACTTCAATGTTTGTCTACAAACTCAAGGTGCTTGAAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGCGAACTTCGAGCCCTCGAACCAGTTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGATAACGTCTTGATTCGTGAGTTCCTTGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGTAGTAAGAGATGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGATGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATTAACGGTTGCGATATCGGGGTAAGGGCTCTCGCTTCACATCCAATGAAAGCCTACAAAAAACGGGTCGGAGAAAAGCACGTTCCGATAACTATAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAGAGAACTGTTGATTAGTTCCCTTCCAAAGATTTTGATGGTAGGATGATATTGTTATACGAGGACAAGCACGAGGGCGAGCGCGAGGGCGAGGGCTCATCAGTAACGCTCTTAATGTCTACTTGTGGACCCTATAATTCAACTCCTTGTTATATTTATCACTAAAATGATGTATTACTACTTGAGCTTAATACGATGTTGTGTGCTGTGAAAGATGAACTGCTGCATTATTGTTGTAAGCATCTTATTGTGTTATGAACACTAAATACTTGATTGAAGGAAGATCCATATTTCTATGTAAACTATTTTGAATGTGTTCTAATTATGTTCAATATAATACAGACAGGTTTCTGTAGGCAC TACTTTTGTGGTGATTTATTGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTTAATGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTCAATGACTATTGTTGATCTTGTTCTGTGCTTGAAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGCGAACTTCGAGCCCTCGAACCAGTTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGATAACGTCTTGATTCGTGAGTTCCTTGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGTAGTAAGAGATGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGATGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATTAACGGTTGCGATATCGGGGTAAGGGCTCTCGCTTCACATCCAATGAAAGCCTACAAAAAACGGGTCGGAGAAAAGCACGTTCCGATAACTATAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAGAGAACTGTTGATTAGTTCCCTTCCAAAGATTTTGATGGTAGGATGATATTGTTATACGAGGACAAGCACGAGGGCGAGCGCGAGGGCGAGGGCTCATCAGTAACGCTCTTAATGTCTACTTGTGGACCCTATAATTCAACTCCTTGTTATATTTATCACTAAAATGATGTATTACTACTTGAGCTTAATACGATGTTGTGTGCTGTGAAAGATGAACTGCTGCATTATTGTTGTAAGCATCTTATTGTGTTATGAACACTAAATACTTGATTGAAGGAAGATCCATATTTCTATGTAAACTATTTTGAATGTGTTCTAATTATGTTCAATATAATACAGACAGGTTTCTGTAGGCAC TACTTTTGTGGTGATTTATTGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTTAATGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTCAATGACTATTGTTGATCTTGTTCTGTGCTTGAAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGCGAACTTCGAGCCCTCGAACCAGTTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGATAACGTCTTGATTCGTGAGTTCCTTGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGTAGTAAGAGATGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGATGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATTAACGGTTGCGATATCGGGGTAAGGGCTCTCGCTTCACATCCAATGAAAGCCTACAAAAAACGGGTCGGAGAAAAGCACGTTCCGATAACTATAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAG YFCGDLLTIVDLVLFVNDFCVDLMTIVDLVLFVNDFCVDSMTIVDLVLCLKQMALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV
BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAA2_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN=At5g16450 PE=1 SV=1) HSP 1 Score: 294.7 bits (753), Expect = 8.5e-79 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAA1_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana GN=At3g02770 PE=2 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 3.6e-77 Identity = 139/166 (83.73%), Postives = 153/166 (92.17%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAA3_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana GN=At5g56260 PE=1 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAAH_CUPPJ (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=Reut_A1963 PE=3 SV=1) HSP 1 Score: 196.4 bits (498), Expect = 3.2e-49 Identity = 86/159 (54.09%), Postives = 115/159 (72.33%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAAH_BURM1 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1223 PE=3 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 9.2e-49 Identity = 89/160 (55.62%), Postives = 115/160 (71.88%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: A0A0A0LXT5_CUCSA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus GN=Csa_1G657460 PE=3 SV=1) HSP 1 Score: 336.3 bits (861), Expect = 2.8e-89 Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: K4BNY4_SOLLC (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Solanum lycopersicum PE=3 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84 Identity = 155/172 (90.12%), Postives = 164/172 (95.35%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: A0A067EJI8_CITSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis GN=CISIN_1g031057mg PE=3 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84 Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: I3SFU5_LOTJA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Lotus japonicus PE=2 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84 Identity = 154/166 (92.77%), Postives = 161/166 (96.99%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: V4SME9_9ROSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus clementina GN=CICLE_v10012944mg PE=3 SV=1) HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84 Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TAIR10
Match: AT5G16450.1 (AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 294.7 bits (753), Expect = 4.8e-80 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TAIR10
Match: AT3G02770.1 (AT3G02770.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 289.3 bits (739), Expect = 2.0e-78 Identity = 139/166 (83.73%), Postives = 153/166 (92.17%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. TAIR10
Match: AT5G56260.1 (AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 247.3 bits (630), Expect = 8.8e-66 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|449442669|ref|XP_004139103.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus]) HSP 1 Score: 336.3 bits (861), Expect = 4.1e-89 Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|659085949|ref|XP_008443692.1| (PREDICTED: regulator of ribonuclease-like protein 2 [Cucumis melo]) HSP 1 Score: 335.1 bits (858), Expect = 9.1e-89 Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|729321083|ref|XP_010533431.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassleriana]) HSP 1 Score: 320.9 bits (821), Expect = 1.8e-84 Identity = 157/166 (94.58%), Postives = 161/166 (96.99%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|743925654|ref|XP_011006971.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica]) HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84 Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1
BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|747059567|ref|XP_011076171.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Sesamum indicum]) HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84 Identity = 157/166 (94.58%), Postives = 162/166 (97.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|