Cp4.1LG18g02490 (gene) Cucurbita pepo (Zucchini)

NameCp4.1LG18g02490
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
Description4-hydroxy-4-methyl-2-oxoglutarate aldolase
LocationCp4.1LG18 : 4192490 .. 4195558 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TACTTTTGTGGTGATTTATTGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTTAATGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTCAATGACTATTGTTGATCTTGTTCTGTTCGTCAATTAGTGACATTCTATGTACCGACACTTTTCTGATTTGGATTTGATGTTACTTTTTTTGGTATAAAATTTCTGCATTACAATGAATTTTGTGGAGCTATCTTGTTTGATAAGCTTATTTGTTTCTTGTCACGGAGTTTCTATGGTTATCATTGAAGGCAAAAGATGAAAAAATACATGGATAATCAAGAGCTGGGATCTCATTTTTTTCCTTCTTTTATTTTTTAAATGGGATCTCAAAGTGTTGAACAAATGTTGTTCTTTGTTTGAGGGCTCTAGTGAAAAGGAGTCGAGCCTCGATTAAAGGTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAAACACCCTTTATAAGGGTATGGAAACCTTCCCCTAGCAAACGTGTTTTAAAGCCTTGAGGGGAAACCCAAGAGGGAAAGCTCAAATAGGACAATATTTGGTAGAGATGGATCTGAGCCGTTACAAATGGTATTAGAGTCAGACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAAGGGGTAGGCACGAGACGGTGTGCCAGTAAGGACGCTGGGCCCCGAAGAGGGGTGGATTGTGATGTCCCTCATTGGTTGGGGAAGAGAACAAAACTCCCTTTATAAGGGTATGAAAACCTTCCCTTGAGGGGAAGGTGTGATGTCCCACATGAGGAGAACAAAACACCCTTTGTAAGGGTATGAAAACCTTCCCCTGGCATATGCGTTTTAAAGCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTTGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAACGAGGAGGCTGTTCCCCAAAAGGGTAGGCACGAGACAGTGTGCCAGTAAGGACATTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGAGAACAAAATACCCTTCCCCTGGCATATGCGTTTTAAACCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAACGAGGAGGCTGTTCCCCAAAAGGGTAGGCACGAGACAGTGTGCCAGTAAGGACATTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGAGAACAAAATACCCTTCCCCTGGCATATGCGTTTTAAACCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAAGGGGTAGGCACGAGACAGTGTGCCAGTAAGGACGTTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGAGAACAAAATACCCTTCCCCTGGCATATGCGTTTTAAACCTTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAAAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAATGGTATAAGAGTTAGACACCGGACTATGTGCCAGCGAGGAGGCTGTTCCCCAAAAGGGGTAGGCACGAGACAGTGTGCCAGTAAGGACGTTGGGCCCTGAAGGGGGTGGATTGTGATGTCCCACATTGGTTGGGGGGGAGAACAAAATACTCTTTATAAGGGTATGGAAACCTTCCCCTAGCAGACGCGTTTAAACCCTTGAGGGAAAGCCAAAAAAGGACAATATTTGCTAACGGTGGATTTGGGCCATTACAAAGGGAAAACTATCCGAGGGCTCTATGGTGTACTAAGTTGGTTTTCTAGTTCCGTGTATTTACTGTTAACTCATTGCATATGGATTTTGAATGAAATCCATTACAAAAACACAAAATCTGTTAATTTTCCAACATGTTTGTGATTGTGTTTTATCTGCAAAATTGTTTTCTTTCAAGAAATGACCAAATGGAACCATTTCTGCTTTAGCTGACTTCAATGTTTGTCTACAAACTCAAGGTGCTTGAAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGCGAACTTCGAGCCCTCGAACCAGTTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGATAACGTCTTGATTCGTGAGTTCCTTGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGTAGTAAGAGATGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGATGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATTAACGGTTGCGATATCGGGGTAAGGGCTCTCGCTTCACATCCAATGAAAGCCTACAAAAAACGGGTCGGAGAAAAGCACGTTCCGATAACTATAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAGAGAACTGTTGATTAGTTCCCTTCCAAAGATTTTGATGGTAGGATGATATTGTTATACGAGGACAAGCACGAGGGCGAGCGCGAGGGCGAGGGCTCATCAGTAACGCTCTTAATGTCTACTTGTGGACCCTATAATTCAACTCCTTGTTATATTTATCACTAAAATGATGTATTACTACTTGAGCTTAATACGATGTTGTGTGCTGTGAAAGATGAACTGCTGCATTATTGTTGTAAGCATCTTATTGTGTTATGAACACTAAATACTTGATTGAAGGAAGATCCATATTTCTATGTAAACTATTTTGAATGTGTTCTAATTATGTTCAATATAATACAGACAGGTTTCTGTAGGCAC

mRNA sequence

TACTTTTGTGGTGATTTATTGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTTAATGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTCAATGACTATTGTTGATCTTGTTCTGTGCTTGAAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGCGAACTTCGAGCCCTCGAACCAGTTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGATAACGTCTTGATTCGTGAGTTCCTTGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGTAGTAAGAGATGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGATGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATTAACGGTTGCGATATCGGGGTAAGGGCTCTCGCTTCACATCCAATGAAAGCCTACAAAAAACGGGTCGGAGAAAAGCACGTTCCGATAACTATAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAGAGAACTGTTGATTAGTTCCCTTCCAAAGATTTTGATGGTAGGATGATATTGTTATACGAGGACAAGCACGAGGGCGAGCGCGAGGGCGAGGGCTCATCAGTAACGCTCTTAATGTCTACTTGTGGACCCTATAATTCAACTCCTTGTTATATTTATCACTAAAATGATGTATTACTACTTGAGCTTAATACGATGTTGTGTGCTGTGAAAGATGAACTGCTGCATTATTGTTGTAAGCATCTTATTGTGTTATGAACACTAAATACTTGATTGAAGGAAGATCCATATTTCTATGTAAACTATTTTGAATGTGTTCTAATTATGTTCAATATAATACAGACAGGTTTCTGTAGGCAC

Coding sequence (CDS)

TACTTTTGTGGTGATTTATTGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTTAATGACTATTGTTGATCTTGTTCTGTTCGTCAATGACTTTTGTGTTGATTCAATGACTATTGTTGATCTTGTTCTGTGCTTGAAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGCGAACTTCGAGCCCTCGAACCAGTTTTCCAGATATATGGTCGACGCCAAGTCTTTTCAGGACCAGTAGTCACACTGAAGGTATTTGAAGATAACGTCTTGATTCGTGAGTTCCTTGAGGAGAAGGGTAACGGCAGAGTTCTTGTCGTGGACGGGGGCGGTAGTAAGAGATGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAAAACAATGGATGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATTAACGGTTGCGATATCGGGGTAAGGGCTCTCGCTTCACATCCAATGAAAGCCTACAAAAAACGGGTCGGAGAAAAGCACGTTCCGATAACTATAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTGGTTTCACGAACCGAGTTGTCCGTTTAG

Protein sequence

YFCGDLLTIVDLVLFVNDFCVDLMTIVDLVLFVNDFCVDSMTIVDLVLCLKQMALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV
BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAA2_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 8.5e-79
Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MA VTTAEVCDAN +LI SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HP+KA KK +GE+ VP+ IAGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAA1_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 3.6e-77
Identity = 139/166 (83.73%), Postives = 153/166 (92.17%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MA VTTAEVCDAN ++I SG+LRAL+PVFQIYGRRQ+FSGPVVT+KVFEDN LIR FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HP+KA KK +GE+ V + IAGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAA3_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.6e-64
Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MA   TAE CD+N +LI +G+LRAL P+F+IYG+R+ FSGP+VTLKVFEDNVL+R  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KG G VLV+DGGGS RCA++GGN    AQNNGWSGIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           +P+K+ KK  GEK+VP+ I GT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAAH_CUPPJ (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 3.2e-49
Identity = 86/159 (54.09%), Postives = 115/159 (72.33%), Query Frame = 1

Query: 58  TAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGR 117
           T ++CDAN   +  G LR + PVF+ +G++Q F+GP  TLK+FEDN L+RE LE  G GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 118 VLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKA 177
           VLVVDGGGS RCA++GGN  + A+ NGW GI+VNGCVRD  E++ CDIG+RALA+HP K+
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 178 YKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTEL 217
            K+  GE+ V + + G  +  G W+Y D DG+LVS  +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

BLAST of Cp4.1LG18g02490 vs. Swiss-Prot
Match: RRAAH_BURM1 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) GN=Bmul_1223 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 9.2e-49
Identity = 89/160 (55.62%), Postives = 115/160 (71.88%), Query Frame = 1

Query: 58  TAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGR 117
           T ++CDA+   + +G LR L+P  + YG    F+GP  TLKVFEDN L+R  LE+ G GR
Sbjct: 5   TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64

Query: 118 VLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKA 177
           VLVVDGG S RCA++GGN    A+ NGW+GIVV+GCVRD  E+  C +GV ALA+HP K+
Sbjct: 65  VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124

Query: 178 YKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELS 218
            K+  GE+ VP+T+ GTRI  GEW+YAD DG+LVS T L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164

BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: A0A0A0LXT5_CUCSA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus GN=Csa_1G657460 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 2.8e-89
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKAYKKRVGEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: K4BNY4_SOLLC (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Solanum lycopersicum PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84
Identity = 155/172 (90.12%), Postives = 164/172 (95.35%), Query Frame = 1

Query: 47  VLCLKQMALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLI 106
           +L L QMALVTTAEVCDANPQLIVSGELRAL+P+F+IYGRRQVFSGPVVTLKVFEDNVL+
Sbjct: 80  LLHLHQMALVTTAEVCDANPQLIVSGELRALQPIFKIYGRRQVFSGPVVTLKVFEDNVLV 139

Query: 107 REFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIG 166
           REFLEEKGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIG
Sbjct: 140 REFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIG 199

Query: 167 VRALASHPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           VRALASHPMKA KK +GEKHVPITIAGTRI DGEWLYADTDGIL+S+ EL V
Sbjct: 200 VRALASHPMKANKKGIGEKHVPITIAGTRICDGEWLYADTDGILISKMELCV 251

BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: A0A067EJI8_CITSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis GN=CISIN_1g031057mg PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84
Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRAL+P+FQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKA KK +GEKHVPITI GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166

BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: I3SFU5_LOTJA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84
Identity = 154/166 (92.77%), Postives = 161/166 (96.99%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLI+SGE+RAL PVFQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLILSGEVRALHPVFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKA KK +GEKHVPITIAGTRI DGEWLYADTDGIL+SRTELSV
Sbjct: 121 HPMKANKKGMGEKHVPITIAGTRISDGEWLYADTDGILISRTELSV 166

BLAST of Cp4.1LG18g02490 vs. TrEMBL
Match: V4SME9_9ROSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus clementina GN=CICLE_v10012944mg PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 8.0e-84
Identity = 153/166 (92.17%), Postives = 160/166 (96.39%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRAL+P+FQIYGRRQVFSGP+VTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKA KK +GEKHVPITI GTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166

BLAST of Cp4.1LG18g02490 vs. TAIR10
Match: AT5G16450.1 (AT5G16450.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 294.7 bits (753), Expect = 4.8e-80
Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MA VTTAEVCDAN +LI SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN LIR+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS+RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HP+KA KK +GE+ VP+ IAGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cp4.1LG18g02490 vs. TAIR10
Match: AT3G02770.1 (AT3G02770.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 289.3 bits (739), Expect = 2.0e-78
Identity = 139/166 (83.73%), Postives = 153/166 (92.17%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MA VTTAEVCDAN ++I SG+LRAL+PVFQIYGRRQ+FSGPVVT+KVFEDN LIR FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HP+KA KK +GE+ V + IAGTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

BLAST of Cp4.1LG18g02490 vs. TAIR10
Match: AT5G56260.1 (AT5G56260.1 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 247.3 bits (630), Expect = 8.8e-66
Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MA   TAE CD+N +LI +G+LRAL P+F+IYG+R+ FSGP+VTLKVFEDNVL+R  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KG G VLV+DGGGS RCA++GGN    AQNNGWSGIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           +P+K+ KK  GEK+VP+ I GT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|449442669|ref|XP_004139103.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus])

HSP 1 Score: 336.3 bits (861), Expect = 4.1e-89
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKAYKKRVGEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|659085949|ref|XP_008443692.1| (PREDICTED: regulator of ribonuclease-like protein 2 [Cucumis melo])

HSP 1 Score: 335.1 bits (858), Expect = 9.1e-89
Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKAYKKRVGEKHVPIT+AGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|729321083|ref|XP_010533431.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassleriana])

HSP 1 Score: 320.9 bits (821), Expect = 1.8e-84
Identity = 157/166 (94.58%), Postives = 161/166 (96.99%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRAL+PVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKA KK +GEKHVPI IAGTRI DGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKANKKGIGEKHVPINIAGTRICDGEWLYADTDGILVSRTELSV 166

BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|743925654|ref|XP_011006971.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica])

HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRAL+P+FQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGWSGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWSGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HPMKA KK +GEKHVPITI GTRI DGEWLYADTDGIL+SRTEL+V
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRTELAV 166

BLAST of Cp4.1LG18g02490 vs. NCBI nr
Match: gi|747059567|ref|XP_011076171.1| (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Sesamum indicum])

HSP 1 Score: 320.5 bits (820), Expect = 2.3e-84
Identity = 157/166 (94.58%), Postives = 162/166 (97.59%), Query Frame = 1

Query: 53  MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 112
           MALVTTAEVCDANPQLIVSGELRAL+PVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 113 KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 172
           KGNGRVLVVDGGGS RCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 173 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 219
           HP+KA KK +GEKHVPITIAGTRI DGEWLYADTDGILVS+TELSV
Sbjct: 121 HPVKANKKGIGEKHVPITIAGTRISDGEWLYADTDGILVSKTELSV 166

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RRAA2_ARATH8.5e-7984.34Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana GN... [more]
RRAA1_ARATH3.6e-7783.73Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana GN... [more]
RRAA3_ARATH1.6e-6470.48Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana GN... [more]
RRAAH_CUPPJ3.2e-4954.09Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus pinatubonensi... [more]
RRAAH_BURM19.2e-4955.63Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans ... [more]
Match NameE-valueIdentityDescription
A0A0A0LXT5_CUCSA2.8e-8998.804-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus GN=Csa_1G657460 PE... [more]
K4BNY4_SOLLC8.0e-8490.124-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Solanum lycopersicum PE=3 SV=1[more]
A0A067EJI8_CITSI8.0e-8492.174-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis GN=CISIN_1g031057m... [more]
I3SFU5_LOTJA8.0e-8492.774-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Lotus japonicus PE=2 SV=1[more]
V4SME9_9ROSI8.0e-8492.174-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus clementina GN=CICLE_v100129... [more]
Match NameE-valueIdentityDescription
AT5G16450.14.8e-8084.34 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase[more]
AT3G02770.12.0e-7883.73 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase[more]
AT5G56260.18.8e-6670.48 Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase[more]
Match NameE-valueIdentityDescription
gi|449442669|ref|XP_004139103.1|4.1e-8998.80PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativu... [more]
gi|659085949|ref|XP_008443692.1|9.1e-8998.19PREDICTED: regulator of ribonuclease-like protein 2 [Cucumis melo][more]
gi|729321083|ref|XP_010533431.1|1.8e-8494.58PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Tarenaya hassl... [more]
gi|743925654|ref|XP_011006971.1|2.3e-8493.37PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphra... [more]
gi|747059567|ref|XP_011076171.1|2.3e-8494.58PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Sesamum indicu... [more]
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0051252regulation of RNA metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0008428ribonuclease inhibitor activity
Vocabulary: INTERPRO
TermDefinition
IPR010203RraA
IPR005493RraA/RraA-like
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006525 arginine metabolic process
biological_process GO:0018874 benzoate metabolic process
biological_process GO:0032259 methylation
biological_process GO:0043086 negative regulation of catalytic activity
biological_process GO:0006560 proline metabolic process
biological_process GO:0006090 pyruvate metabolic process
biological_process GO:0051252 regulation of RNA metabolic process
biological_process GO:0019915 lipid storage
cellular_component GO:0005575 cellular_component
molecular_function GO:0047443 4-hydroxy-4-methyl-2-oxoglutarate aldolase activity
molecular_function GO:0046872 metal ion binding
molecular_function GO:0008168 methyltransferase activity
molecular_function GO:0008948 oxaloacetate decarboxylase activity
molecular_function GO:0008428 ribonuclease inhibitor activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG18g02490.1Cp4.1LG18g02490.1mRNA


Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinGENE3DG3DSA:3.50.30.40coord: 56..216
score: 5.3
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinPFAMPF03737Methyltransf_6coord: 58..211
score: 1.0
IPR005493Ribonuclease E inhibitor RraA/RraA-like proteinunknownSSF89562RraA-likecoord: 56..216
score: 3.53
IPR010203Regulator of ribonuclease activity ATIGRFAMsTIGR01935TIGR01935coord: 58..212
score: 1.4
NoneNo IPR availablePANTHERPTHR33254FAMILY NOT NAMEDcoord: 50..216
score: 1.6E
NoneNo IPR availablePANTHERPTHR33254:SF4REGULATOR OF RIBONUCLEASE-LIKE PROTEIN 1-RELATEDcoord: 50..216
score: 1.6E