Carg22725 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22725
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	4-hydroxy-4-methyl-2-oxoglutarate aldolase
Location	Cucurbita_argyrosperma_scaffold_230 : 359009 .. 360906 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTTTAAGTGATTTGACATGGACAAAAGTGGAGAATGAAAGACTCGAAAGGGATCAGGTTTCTCATATCATATATAAAACATTGATTCTAGCTCCCACCCGTGGAGAATCAGGAAGAATCTAGGCTTGTGACAGCTTTAGTGCTGTTTGATAGAATTTATGGCTTAAGAGACATAAAATAATCTTTAATGATTTGCACAAAAGTTTTGGTCTACTTCAGGAAGTCATAATTTTGTTCCTTCTTCTTAGTTCCTTGTAACGGCTACCCTGCTTCTTTGTGTCCGGGTTGTAGAATCTTATAAGTTGAGGAATGTCGCAATGAGAGAATTATCTTATCGAGTATGTTGATGAGTGGGATTAGTGTGAGATCCCACGTCAATTGAATAGGAGAATGAAACATTCCTTATAAGGGCGTGTAAACCTCTCTCTATAAAATACGTTTTAAAACCTCAAGGAGAAATTCGAAAGGGAAAGTCCAAAGAAGACAATATCTACTAGCAGTGAGCTTGAACGGTTACAATTATTCATATTTAAATGTTCTAGTTTTTGAAATAGTATAGAAAATTTGAACTTTTAACTGTGTTTCTGGTAACTCGTGAGCTCCATTTTACAAGAACCGAACAACAAATACAAGAATGACATGGATAAACCCTTGATCTTGTCATTGACCTTTGTGATCAGGAGCCTTCAAATAAGTGTGCTATCTTTTCCAAGAGGATATTGCACATTGTTTTGCTATGGCTCAAAGTTGGTTGTGATGATCTGCTTTCTACTGCACACGAACATATAAGCCTTTTGTTTTTACTTGCTTCTGATAGTGCTTTTATCAGCAAAGTCCTTGTACTTGTGTTTTCTTTCAAGAAATGACCAAATAGCAGAATCTCTGGTTCACTGAATTCAATATTTGGTTACAAACACAAGGTGCTGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTCCGAGCCCTGGAGCCAATCTTCCAGATATATGGGCGACGCCAAGTGTTTTCAGGACCAGTAGTGACACTAAAGGTGTTTGAAGACAATGTGTTGGTACGTGAGTTCCTGGAGGAGAAGGGTAAGGGCAGAGTTCTTGTGGTGGACGGAGGCGGTAGCAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAGAACAACGGATGGGCTGGCATAGTTGTGAATGGTTGTGTCCGAGACGTGGATGAAATCAATGGGTGCGATATTGGGGTCAGGGCTCTGGCTTCACATCCAATGAAGGCCAACAAGAAGCGGGTTGGAGAGAAGCACGTCCCTATAACTGTGGGCGGGACAAGGATCATGGATGGGGAGTGGCTGTATGCTGATACCGATGGGATTCTGGTTTCACGGACTGAGTTGTCTGTTTAGAGAAGTGTTGTTCAAAGATTTTGATGGCAGGATGATATTGTTAGACAAGAGCATGAGCAAGAGCTTGTCAGTAATGGTGTTGATGTCTATTATATTTATCATTAAGATTATGTTATGTGGTTTGAATGATGAACTGCTGCGTTATGTGGCCTTTATTGTTGTTGTATGCAACATGTTAATGAAAAACTTGATCATTTTGAATCTTTGTTTTGTCTATAAAACTGATTTCAGGTGGGCGATTCTTCTAAAAGATGGCTTTTGGGTTGCAGCTATGTGTTACGGTCGTACTATTTGAATCGTGCATCATGGTGATCTTGATACTATCATGACAGACAAGGTTTAAGGAGAACAAAAGTAGACTGTGCACTATACAAAGGCAAGTAAGCACTTTCTGTGATTTGTAATTTACTCGTTGTTTGACAGCTAAAAGAGGGTCTTCTGGGTTGCAGCTATGTGTCGCAGTCG

mRNA sequence

GTTTTAAGTGATTTGACATGGACAAAAGTGGAGAATGAAAGACTCGAAAGGGATCAGGTGCTGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTCCGAGCCCTGGAGCCAATCTTCCAGATATATGGGCGACGCCAAGTGTTTTCAGGACCAGTAGTGACACTAAAGGTGTTTGAAGACAATGTGTTGGTACGTGAGTTCCTGGAGGAGAAGGGTAAGGGCAGAGTTCTTGTGGTGGACGGAGGCGGTAGCAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAGAACAACGGATGGGCTGGCATAGTTGTGAATGGTTGTGTCCGAGACGTGGATGAAATCAATGGGTGCGATATTGGGGTCAGGGCTCTGGCTTCACATCCAATGAAGGCCAACAAGAAGCGGGTTGGAGAGAAGCACGTCCCTATAACTGTGGGCGGGACAAGGATCATGGATGGGGAGTGGCTGTATGCTGATACCGATGGGATTCTGGTTTCACGGACTGAGTTGTCTGTTTAGAGAAGTGTTGTTCAAAGATTTTGATGGCAGGATGATATTGTTAGACAAGAGCATGAGCAAGAGCTTGTCAGTAATGGTGTTGATGTCTATTATATTTATCATTAAGATTATGTTATGTGGTTTGAATGATGAACTGCTGCGTTATGTGGCCTTTATTGTTGTTGTATGCAACATGTTAATGAAAAACTTGATCATTTTGAATCTTTGTTTTGTCTATAAAACTGATTTCAGGTGGGCGATTCTTCTAAAAGATGGCTTTTGGGTTGCAGCTATGTGTTACGGTCGTACTATTTGAATCGTGCATCATGGTGATCTTGATACTATCATGACAGACAAGGTTTAAGGAGAACAAAAGTAGACTGTGCACTATACAAAGGCAAGTAAGCACTTTCTGTGATTTGTAATTTACTCGTTGTTTGACAGCTAAAAGAGGGTCTTCTGGGTTGCAGCTATGTGTCGCAGTCG

Coding sequence (CDS)

GTTTTAAGTGATTTGACATGGACAAAAGTGGAGAATGAAAGACTCGAAAGGGATCAGGTGCTGGAGCAAATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAGCTCATTGTGAGTGGTGAACTCCGAGCCCTGGAGCCAATCTTCCAGATATATGGGCGACGCCAAGTGTTTTCAGGACCAGTAGTGACACTAAAGGTGTTTGAAGACAATGTGTTGGTACGTGAGTTCCTGGAGGAGAAGGGTAAGGGCAGAGTTCTTGTGGTGGACGGAGGCGGTAGCAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTCCAAGCTCAGAACAACGGATGGGCTGGCATAGTTGTGAATGGTTGTGTCCGAGACGTGGATGAAATCAATGGGTGCGATATTGGGGTCAGGGCTCTGGCTTCACATCCAATGAAGGCCAACAAGAAGCGGGTTGGAGAGAAGCACGTCCCTATAACTGTGGGCGGGACAAGGATCATGGATGGGGAGTGGCTGTATGCTGATACCGATGGGATTCTGGTTTCACGGACTGAGTTGTCTGTTTAG

Protein sequence

VLSDLTWTKVENERLERDQVLEQMALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV

Homology

[Close]

BLAST of Carg22725 vs. NCBI nr
Match: XP_022933782.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >XP_023005764.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_023520656.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 336.7 bits (862), Expect = 5.3e-89
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. NCBI nr
Match: XP_008443692.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo])

HSP 1 Score: 328.9 bits (842), Expect = 1.1e-86
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKA KKRVGEKHVPITV GTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. NCBI nr
Match: XP_022988625.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_022988626.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima])

HSP 1 Score: 328.2 bits (840), Expect = 1.9e-86
Identity = 160/166 (96.39%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKA KKRVGEKHVPIT+ GTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. NCBI nr
Match: XP_004139103.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus] >KGN66670.1 hypothetical protein Csa_1G657460 [Cucumis sativus])

HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKA KKRVGEKHVPITV GTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. NCBI nr
Match: XP_022960655.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >XP_022960656.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata])

HSP 1 Score: 327.0 bits (837), Expect = 4.2e-86
Identity = 159/166 (95.78%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIV+GELRALEP+FQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVNGELRALEPVFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKA KKRVGEKHVPIT+ GTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITIAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. TAIR10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 292.4 bits (747), Expect = 2.1e-79
Identity = 138/166 (83.13%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN L+R+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HP+KA+KK +GE+ VP+ + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Carg22725 vs. TAIR10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-77
Identity = 135/166 (81.33%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN L+R FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HP+KA+KK +GE+ V + + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Carg22725 vs. TAIR10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase)

HSP 1 Score: 249.6 bits (636), Expect = 1.5e-66
Identity = 118/166 (71.08%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVLVR  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG+G VLV+DGGGS RCA++GGN    AQNNGW+GIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           +P+K+ KK  GEK+VP+ +GGT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of Carg22725 vs. Swiss-Prot
Match: sp|Q9FFE0|RRAA2_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 3.7e-78
Identity = 138/166 (83.13%), Postives = 155/166 (93.37%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MA VTTAEVCDAN +LI SG+LRAL+PIFQIYGRRQ+FSGPVVT+KVFEDN L+R+F+EE
Sbjct: 1   MAFVTTAEVCDANQELIRSGQLRALQPIFQIYGRRQIFSGPVVTVKVFEDNGLIRQFIEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS+RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSQRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HP+KA+KK +GE+ VP+ + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVPVNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Carg22725 vs. Swiss-Prot
Match: sp|Q9M8R9|RRAA1_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 2.7e-76
Identity = 135/166 (81.33%), Postives = 152/166 (91.57%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MA VTTAEVCDAN ++I SG+LRAL+P+FQIYGRRQ+FSGPVVT+KVFEDN L+R FLEE
Sbjct: 1   MAFVTTAEVCDANQEMIRSGQLRALQPVFQIYGRRQIFSGPVVTVKVFEDNGLIRHFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGI+VNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIIVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HP+KA+KK +GE+ V + + GTRI DGEWLYADTDGILVS+ ELSV
Sbjct: 121 HPIKASKKGLGEQRVSLNIAGTRICDGEWLYADTDGILVSQIELSV 166

[Close]

BLAST of Carg22725 vs. Swiss-Prot
Match: sp|Q9FH13|RRAA3_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-65
Identity = 118/166 (71.08%), Postives = 141/166 (84.94%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MA   TAE CD+N +LI +G+LRAL PIF+IYG+R+ FSGP+VTLKVFEDNVLVR  LE 
Sbjct: 1   MAAFATAEACDSNAELISNGDLRALHPIFKIYGQRRCFSGPIVTLKVFEDNVLVRNQLET 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG+G VLV+DGGGS RCA++GGN    AQNNGW+GIVVNGCVRDVDEIN CD+GVRAL S
Sbjct: 61  KGEGGVLVIDGGGSMRCALVGGNLGQLAQNNGWSGIVVNGCVRDVDEINDCDVGVRALGS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           +P+K+ KK  GEK+VP+ +GGT I DGEWLYAD+DGIL+S+TELSV
Sbjct: 121 NPLKSTKKGHGEKNVPVHIGGTLIRDGEWLYADSDGILISKTELSV 166

[Close]

BLAST of Carg22725 vs. Swiss-Prot
Match: sp|Q46ZV6|RRAAH_CUPNJ (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus necator (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 2.1e-49
Identity = 86/159 (54.09%), Postives = 116/159 (72.96%), Query Frame = 0


Query: 29  TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGKGR 88
           T ++CDAN   +  G LR + P+F+ +G++Q F+GP  TLK+FEDN LVRE LE  G+GR
Sbjct: 5   TTDLCDANEPRLADGTLRVMAPVFRAFGKQQAFAGPAATLKIFEDNSLVREALESPGQGR 64

Query: 89  VLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKA 148
           VLVVDGGGS RCA++GGN  + A+ NGW GI+VNGCVRD  E++ CDIG+RALA+HP K+
Sbjct: 65  VLVVDGGGSLRCALVGGNLGLLAEKNGWVGIIVNGCVRDTGELDVCDIGIRALAAHPQKS 124

Query: 149 NKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTEL 188
            K+  GE+ V + + G  +  G W+Y D DG+LVS  +L
Sbjct: 125 QKRGAGERDVAVQMPGAVVRPGNWIYVDADGVLVSEEKL 163

[Close]

BLAST of Carg22725 vs. Swiss-Prot
Match: sp|A9AHQ6|RRAAH_BURM1 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=Bmul_1223 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.1e-49
Identity = 92/160 (57.50%), Postives = 116/160 (72.50%), Query Frame = 0


Query: 29  TAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEEKGKGR 88
           T ++CDA+   + +G LR L+P  + YG    F+GP  TLKVFEDN LVR  LE+ G GR
Sbjct: 5   TTDLCDAHEDKLAAGTLRVLQPALRPYGGAARFAGPAATLKVFEDNTLVRAALEQDGGGR 64

Query: 89  VLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALASHPMKA 148
           VLVVDGG S RCA++GGN    A+ NGWAGIVV+GCVRD  E+  C +GV ALA+HP K+
Sbjct: 65  VLVVDGGASLRCALVGGNLGALAEKNGWAGIVVHGCVRDAAELRECKVGVLALATHPRKS 124

Query: 149 NKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELS 189
           +K+  GE+ VP+TV GTRI  GEW+YAD DG+LVS T L+
Sbjct: 125 DKRGAGERDVPVTVLGTRIAPGEWIYADDDGVLVSATSLT 164

[Close]

BLAST of Carg22725 vs. TrEMBL
Match: tr|A0A1S3B858|A0A1S3B858_CUCME (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103487227 PE=3 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 7.3e-87
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKA KKRVGEKHVPITV GTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. TrEMBL
Match: tr|A0A0A0LXT5|A0A0A0LXT5_CUCSA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_1G657460 PE=3 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 1.6e-86
Identity = 161/166 (96.99%), Postives = 163/166 (98.19%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGSKRCAILGGNPVVQAQNNGW+GIVVNGCVRDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKA KKRVGEKHVPITV GTRIMDGEWLYADTDGILVSRTELSV
Sbjct: 121 HPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV 166

[Close]

BLAST of Carg22725 vs. TrEMBL
Match: tr|A0A2C9UTQ6|A0A2C9UTQ6_MANES (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Manihot esculenta OX=3983 GN=MANES_12G005600 PE=3 SV=1)

HSP 1 Score: 322.4 bits (825), Expect = 6.8e-85
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MAL TTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGPVVTLKVFEDNVL+REFLEE
Sbjct: 1   MALATTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKANKK +GEKHVPIT+GGTRI DGEWLYADTDGIL+SRTELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRICDGEWLYADTDGILISRTELSV 166

[Close]

BLAST of Carg22725 vs. TrEMBL
Match: tr|A0A068TPU4|A0A068TPU4_COFCA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Coffea canephora OX=49390 GN=GSCOC_T00022026001 PE=3 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 8.9e-85
Identity = 155/166 (93.37%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGP+VTLKVFEDNVLVREFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLVREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKANKK +GEKHVPIT+GGTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRICDGEWLYADTDGILISRAELSV 166

[Close]

BLAST of Carg22725 vs. TrEMBL
Match: tr|A0A067EJI8|A0A067EJI8_CITSI (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis OX=2711 GN=CISIN_1g031057mg PE=3 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 1.2e-84
Identity = 154/166 (92.77%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 24  MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLVREFLEE 83
           MALVTTAEVCDANPQLIVSGELRAL+PIFQIYGRRQVFSGP+VTLKVFEDNVL+REFLEE
Sbjct: 1   MALVTTAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEE 60

Query: 84  KGKGRVLVVDGGGSKRCAILGGNPVVQAQNNGWAGIVVNGCVRDVDEINGCDIGVRALAS 143
           KG GRVLVVDGGGS RCAILGGNPVVQAQNNGWAGIVVNGC+RDVDEINGCDIGVRALAS
Sbjct: 61  KGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALAS 120

Query: 144 HPMKANKKRVGEKHVPITVGGTRIMDGEWLYADTDGILVSRTELSV 190
           HPMKANKK +GEKHVPIT+GGTRI DGEWLYADTDGIL+SR ELSV
Sbjct: 121 HPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 166

The following BLAST results are available for this feature:

BLAST of Carg22725 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933782.1	5.3e-89	100.00	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >XP_0...	[more]
XP_008443692.1	1.1e-86	97.59	PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo]	[more]
XP_022988625.1	1.9e-86	96.39	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_022...	[more]
XP_004139103.1	2.4e-86	96.99	PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativu...	[more]
XP_022960655.1	4.2e-86	95.78	putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >XP_0...	[more]

BLAST of Carg22725 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G16450.1	2.1e-79	83.13	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT3G02770.1	1.5e-77	81.33	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]
AT5G56260.1	1.5e-66	71.08	Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase	[more]

BLAST of Carg22725 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FFE0\|RRAA2_ARATH	3.7e-78	83.13	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9M8R9\|RRAA1_ARATH	2.7e-76	81.33	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX...	[more]
sp\|Q9FH13\|RRAA3_ARATH	2.8e-65	71.08	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX...	[more]
sp\|Q46ZV6\|RRAAH_CUPNJ	2.1e-49	54.09	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus necator (stra...	[more]
sp\|A9AHQ6\|RRAAH_BURM1	8.1e-49	57.50	Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans ...	[more]

BLAST of Carg22725 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3B858\|A0A1S3B858_CUCME	7.3e-87	97.59	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC1034872...	[more]
tr\|A0A0A0LXT5\|A0A0A0LXT5_CUCSA	1.6e-86	96.99	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_1G6...	[more]
tr\|A0A2C9UTQ6\|A0A2C9UTQ6_MANES	6.8e-85	93.37	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Manihot esculenta OX=3983 GN=MANES...	[more]
tr\|A0A068TPU4\|A0A068TPU4_COFCA	8.9e-85	93.37	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Coffea canephora OX=49390 GN=GSCOC...	[more]
tr\|A0A067EJI8\|A0A067EJI8_CITSI	1.2e-84	92.77	4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Citrus sinensis OX=2711 GN=CISIN_1...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0008428	ribonuclease inhibitor activity

Vocabulary: **Biological Process**
Term	Definition
GO:0051252	regulation of RNA metabolic process

Vocabulary: **INTERPRO**
Term	Definition
IPR036704	RraA/RraA-like_sf
IPR010203	RraA
IPR005493	RraA/RraA-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051252	regulation of RNA metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0008428	ribonuclease inhibitor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22725-RA	Carg22725-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	PFAM	PF03737	RraA-like	coord: 29..182 e-value: 1.9E-42 score: 144.8
IPR005493	Ribonuclease E inhibitor RraA/RraA-like protein	CDD	cd16841	RraA_family	coord: 30..183 e-value: 3.19298E-54 score: 170.718
None	No IPR available	GENE3D	G3DSA:3.50.30.40		coord: 26..189 e-value: 1.2E-65 score: 222.1
None	No IPR available	PANTHER	PTHR33254:SF13	4-HYDROXY-4-METHYL-2-OXOGLUTARATE ALDOLASE 1-RELATED	coord: 24..189
None	No IPR available	PANTHER	PTHR33254	FAMILY NOT NAMED	coord: 24..189
IPR010203	Regulator of ribonuclease activity A	TIGRFAM	TIGR01935	TIGR01935	coord: 29..183 e-value: 6.6E-65 score: 215.5
IPR036704	Ribonuclease E inhibitor RraA/RraA-like superfamily	SUPERFAMILY	SSF89562	RraA-like	coord: 27..187

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22725	Cla009552	Watermelon (97103) v1	carwmB0531
Carg22725	Csa1G657460	Cucumber (Chinese Long) v2	carcuB0565
Carg22725	MELO3C010055	Melon (DHL92) v3.5.1	carmeB0540
Carg22725	ClCG03G010660	Watermelon (Charleston Gray)	carwcgB0519
Carg22725	CSPI01G32310	Wild cucumber (PI 183967)	carcpiB0571
Carg22725	Cucsa.356700	Cucumber (Gy14) v1	carcgyB0613
Carg22725	CmaCh11G009370	Cucurbita maxima (Rimu)	carcmaB0749
Carg22725	CmaCh10G008340	Cucurbita maxima (Rimu)	carcmaB0748
Carg22725	CmoCh11G009580	Cucurbita moschata (Rifu)	carcmoB0727
Carg22725	CmoCh10G008640	Cucurbita moschata (Rifu)	carcmoB0726
Carg22725	Lsi06G006940	Bottle gourd (USVL1VR-Ls)	carlsiB485
Carg22725	Cp4.1LG00g01520	Cucurbita pepo (Zucchini)	carcpeB0756
Carg22725	Cp4.1LG18g02490	Cucurbita pepo (Zucchini)	carcpeB0757
Carg22725	CsGy1G031220	Cucumber (Gy14) v2	carcgybB0542
Carg22725	MELO3C010055.2	Melon (DHL92) v3.6.1	carmedB0545
Carg22725	CsaV3_1G044510	Cucumber (Chinese Long) v3	carcucB0573
Carg22725	Cla97C03G061270	Watermelon (97103) v2	carwmbB0560
Carg22725	Bhi02G001085	Wax gourd	carwgoB0646

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22725	Carg17796	Silver-seed gourd	carcarB502

The following block(s) are covering this gene:

None