CsaV3_1G044510 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TATCCTTCACTCTTAGGTTAAGTGGAACCTCCAAAAGCAAAAAAATAAAAAAGAAAGGCATAAGTAAAAGCATTAAAAGTAATTTTTAGCTTGGGTTGCTCACGAAAGTTGAAAGATTCTTTTGAACATTTGAAAGCAAAATAAAAAGTTTAAGAATACTTTGTATGATGTAGCAAAAGTTAAAATAAAATCAATAAACTATCATGTTAAAAAACCAAATTAATATCTCTCTAGCTAAGTTCTCCAAATGGTTATATATTTGATTCCTTCCATGATGTGATTAAATATTAAAAATATAAATGATGCTAATTACTGCCAAAACTATTTGAGGTTAAGCAAAATGTTCTTATTTAATCATAGACTAAAATTATAGAAAAAAGAAGTTAAGAAAAAGGGAAAGGGAAAAAGAAAAAAAGAAAAGAAATGGAAGGCCAAAAAAAAGAAGAAGAAGAAGAAGAAGAAGAGAAGAAAAAAGAAAGGTGAAGAAGGAAGAGGGAAGGATTTAGTTAAATTTAGGAGAACTAGTTGAGTCCCATAATTGGGTTTCACATAACAAACTAATTCCACAAATTTTCTTCATATTTTCTTCCCTTTTCCCTCGATTGTCTTCCTCATTCTCCTCTGCTCTTCTTATTTATTCTTCAATCCCTTCATCTCATTCTTCTTCAACTCCCTGTACTCTTCCTTTCCTTTCCTTTCCTTTCCCTTCCCTTCCCCCCTGCTTCTTAAGGTAATTCCATTTCATTTCCTCTCTCTTTGCTTCTCTTTCAATTTCTGCGCATCACTTTTCATTCTGCTTAGAAATGAATGTTACTCTTCTTATTTTTTTCCTTTCTTGGTGCTACAAATCATAAATAGTTTGAGACTTTGTTGCTGACTCTTGGATTTCAGATGGGTATTGTTCCGATCGGTGAATTTCTTTGTGAATACTTTGATTTGTTTATTTACTCTAAAACTGGGATCGTGGGGATTGACGATTACTCAGATTTGGATGCTATTGGATCAATTATTTTTGTGTTGATTTAATTACTCTCCCGGATCTTGCTCTGCTCATCAATTAGTGGGATTCTTATGTTCCTCACCATTTTTCTTATTTCGATTTTCTATTAGCTCTACAATAAAATTTCATGAATTGTGTGTTTTTGGCTTGTTTCATACGCTTATTGGTTTTTTATTTTTGAGTTCTCTGTTTCTATGGTTATCATTGAAGGCAGTAGGAATCTCAAACAAACATGTTATTCGTGGTTTTTTCTTCCCTTCATTTCTAGAACAAGAGCTAAGATATTGGAGTAATTGTTTATGTTTCCACATCGAAAAAATTGGATTTGCAGAGGGAAATATGAGGATGATTAACAAGTTTGTTGAAAGAAGCTGTTACTTCTTATAGAGCGAGTCTAATTAGAGAATATAATTAGGCGTGTCAATGGTTTAGAGAGAGAGGAGGAAGAATTCTGAAATTTGAAAGAGGAATGCAAAAATGTTGTTGAAAGCTTTTAATTCCCAAGAAGAATTAAGGCTTTTGGATGTAGCCATCATGTGGTACACTAATAATAAAGTTCAAAGGAAAAGGAAAAGACCCCCTATTTTTTGGTTGCCCGAACTGGCTTTCCTTCTGTCATCTCTTCCTCCTCTGTTCTAATGTTCAAACTTTATGACTTAGGCTGCTAAGTTTCTTCAACTTATCCTTGCTGATGCCTGGAAGAGTGAAGGATTTTATGTTGTTGAGTTTATGCTATGTGGTAACAGTCATAGGGATACCGCTAAGATCTTGTTGACCAATAGCTTCACTGCTGTTTGATGGGGCTTATGGCTGAATGACATAAAAACTTAAATCTAATACAAGAGGTTGTAGTTTTGTTCCTTCTTCTTAGTGCCTTGTGTCTTTGTAGAATCTTGTACTGAGTTAGTTTGGTGTGCAGGATAAATTGATCATTTAATGAGAGTAACTTTTTAAATGCTAAGTAAAGAAGTTTGAAAGCAATATTCACCTTTTCTAGTTTTTGAAACAGTATAAAAATTTTCAAATTTTGAATGCTTATCTGGAACTCAAGGAAGTGGATCATCTCCGTTTTGTAAGATTTGAACAACAATTAAAAGAATGACATAGATCGAACCCTTAATCTTGTCAATGACCTTTGTGATCAAGAGCCTTCAAATAATTGAAGTTTTACTCTGAAGTGTCTGAGAAATAAACTACAATCAATATTCATTACCGGCAATGAGATTACTGAACTAAAGCAAAATAATAAACAGAGACGAGGTAGTTTGAGGTAGAAAAAACAACAATTGAGGCACTCTAGGACTTGTTTTCTGCTATTTTCTTCTTGCCTTTCATAGGGATCATACAGATTAGTAATTGAATTTGCTATCTTAACTAAGAGGATATATTTTTCATTATTCGAAGTTGGTTTTGTAGTTGTGCTTGAATGTATTTACTGTTAACTCATTGTATATGGATTTTGAATGCCCTTCAAGATTCACCTGTGTAGAGCTGAAAATTCATTTAAAAAACATCAAAGCTGTTGAGTTTGCTACATGCTTGTGATTGTGTTTTATCTGTAAATTCCCTATGCCTTTTTGTGTATTTTTTTTTTTTTAAATAACCAATTGAGACCAATTTTTATTTTAACTGAAGTCGATATTTTTCTTAAGGTTCTTGGAACAGATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAGAGAAGTGTTGATTAATTCTCTTTCAAAGATTTTGATGGCAGGATAATATTGTTATACGAGGGCAAGAGCATGTCAGTAATGGTGTTGATGTCTTACTTGTGGACCCTAAAATCCAAGTCCTTGTTATATTTATCAGTAAAGTTGTGTTATGCTTGAGCTTAATATGATGGCGTTTTCTGTTGTAAGATGAATTGATGCATTAATCTCTTAATACTGTCAAGTGGCTTTTACTGTTGTGGCCAACATATTGTCTTATCAATAAAAATTACTTCATAG ATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAG ATGGCCTTGGTTACCACTGCAGAAGTTTGTGATGCTAATCCACAACTCATTGTAAGTGGTGAACTTCGGGCCCTTGAACCAATTTTCCAGATATATGGTCGACGCCAAGTTTTTTCAGGACCAGTGGTCACACTGAAGGTGTTTGAAGACAATGTGTTGATTCGTGAGTTCCTCGAGGAGAAGGGTAACGGCAGAGTTCTTGTGGTGGACGGGGGCGGTAGTAAGAGGTGTGCAATATTGGGTGGCAATCCTGTTGTTCAAGCTCAAAACAATGGTTGGTCTGGTATAGTTGTGAATGGATGTGTTAGAGATGTGGATGAAATAAATGGTTGCGATATTGGGGTAAGGGCTCTTGCGTCACATCCAATGAAAGCCTACAAAAAGCGGGTAGGAGAGAAGCACGTGCCGATAACTGTAGCTGGGACAAGGATCATGGATGGAGAATGGCTGTATGCAGATACTGATGGGATTCTAGTTTCACGAACAGAGTTGTCTGTTTAG MALVTTAEVCDANPQLIVSGELRALEPIFQIYGRRQVFSGPVVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSKRCAILGGNPVVQAQNNGWSGIVVNGCVRDVDEINGCDIGVRALASHPMKAYKKRVGEKHVPITVAGTRIMDGEWLYADTDGILVSRTELSV
BLAST of CsaV3_1G044510 vs. NCBI nr
Match: XP_004139103.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis sativus] >KGN66670.1 hypothetical protein Csa_1G657460 [Cucumis sativus]) HSP 1 Score: 338.2 bits (866), Expect = 1.6e-89 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. NCBI nr
Match: XP_023515582.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo] >XP_023515583.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 337.4 bits (864), Expect = 2.7e-89 Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. NCBI nr
Match: XP_008443692.1 (PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucumis melo]) HSP 1 Score: 337.0 bits (863), Expect = 3.6e-89 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. NCBI nr
Match: XP_022988625.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima] >XP_022988626.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita maxima]) HSP 1 Score: 336.3 bits (861), Expect = 6.1e-89 Identity = 163/166 (98.19%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. NCBI nr
Match: XP_022960655.1 (putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata] >XP_022960656.1 putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Cucurbita moschata]) HSP 1 Score: 335.1 bits (858), Expect = 1.4e-88 Identity = 162/166 (97.59%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TAIR10
Match: AT5G16450.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 295.8 bits (756), Expect = 1.7e-80 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TAIR10
Match: AT3G02770.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 289.7 bits (740), Expect = 1.2e-78 Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TAIR10
Match: AT5G56260.1 (Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase) HSP 1 Score: 248.4 bits (633), Expect = 3.0e-66 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. Swiss-Prot
Match: sp|Q9FFE0|RRAA2_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=At5g16450 PE=1 SV=1) HSP 1 Score: 295.8 bits (756), Expect = 3.0e-79 Identity = 140/166 (84.34%), Postives = 156/166 (93.98%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. Swiss-Prot
Match: sp|Q9M8R9|RRAA1_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=At3g02770 PE=2 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.1e-77 Identity = 137/166 (82.53%), Postives = 153/166 (92.17%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. Swiss-Prot
Match: sp|Q9FH13|RRAA3_ARATH (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 3 OS=Arabidopsis thaliana OX=3702 GN=At5g56260 PE=1 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 5.5e-65 Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. Swiss-Prot
Match: sp|Q46ZV6|RRAAH_CUPNJ (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cupriavidus necator (strain JMP 134 / LMG 1197) OX=264198 GN=Reut_A1963 PE=3 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 1.9e-49 Identity = 85/159 (53.46%), Postives = 115/159 (72.33%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. Swiss-Prot
Match: sp|A9AHQ6|RRAAH_BURM1 (Putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Burkholderia multivorans (strain ATCC 17616 / 249) OX=395019 GN=Bmul_1223 PE=3 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 5.5e-49 Identity = 90/160 (56.25%), Postives = 115/160 (71.88%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TrEMBL
Match: tr|A0A0A0LXT5|A0A0A0LXT5_CUCSA (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis sativus OX=3659 GN=Csa_1G657460 PE=3 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 1.1e-89 Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TrEMBL
Match: tr|A0A1S3B858|A0A1S3B858_CUCME (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Cucumis melo OX=3656 GN=LOC103487227 PE=3 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 2.4e-89 Identity = 165/166 (99.40%), Postives = 166/166 (100.00%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TrEMBL
Match: tr|A0A2P4LB33|A0A2P4LB33_QUESU (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Quercus suber OX=58331 GN=CFP56_28045 PE=3 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.3e-84 Identity = 154/166 (92.77%), Postives = 162/166 (97.59%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TrEMBL
Match: tr|A0A2C9UTQ6|A0A2C9UTQ6_MANES (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Manihot esculenta OX=3983 GN=MANES_12G005600 PE=3 SV=1) HSP 1 Score: 320.1 bits (819), Expect = 3.0e-84 Identity = 154/166 (92.77%), Postives = 160/166 (96.39%), Query Frame = 0
BLAST of CsaV3_1G044510 vs. TrEMBL
Match: tr|A0A218X996|A0A218X996_PUNGR (4-hydroxy-4-methyl-2-oxoglutarate aldolase OS=Punica granatum OX=22663 GN=CDL15_Pgr007284 PE=3 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 5.1e-84 Identity = 153/165 (92.73%), Postives = 161/165 (97.58%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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