Cucsa.340790 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.340790
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	MYB transcription factor
Location	scaffold03356 : 3179106 .. 3180276 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAACCATAATCTCTCTCTCTATCTCTATCTCTTTAAAGTTCCACTTCCAATGACTGAAGAAGAAGAAGAGTCTCTGAAAAGAAAAGTGAAACAAGTTGTTGAAGGAGACATAAATGAGGCTGAAATTTTGAGAAATGGAGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAATTGGCTCAAGTTATTGCCATTCATGGTGCAAAAAGGTGGAAGTCCATTGCAGCTAAAGCAGGTCCATCCCTTTCAACTTTCAACTTCTCCTTTTtCTTTCCAACTTCCCACGCACATATATTCAATGGGTTTCTAAATTTTCCAGGCCTCAATCGTTGTGGGAAGAGTTGCAGACTAAGATGGCTCAATTATCTCAGACCTAACATTAAGAGAGGAAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTTCATAAACTTCTTGGCAACAGGTCAAATTTTCTATCCCCTTTCATTCTATATTTCTCAACTTTTCTTGCTTTCATTAACTTAATAAAAGTTTTGGTTTTCGGAGTTTAGGTGGTCTTTGATTGCTGGGAGACTGCCAGGGCGAACAGATAACGAGATCAAGAACTACTGGAATTCTCATTTGAGCAAAAAAATGAACCAACAGAGTGAAAAaGAAAGAAGGAAAGGGTGTAAAAGAAAAGTGAACACAGAGTCTAGAGAAGAGGAAACGTCTCAAGAACGTGAAAACAGCTCAAACTTGGAGTATGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGACCTGATTTGGAGTGGATGAGTAATTTCCTGTAATTGGGTATCATAAGCAGCAACTATAAAGCTTAGGTTGTTAGTGCACTCTCATGCAAATCATTACTAATTTATCTAAAAATTTAATCGTTTCACTCATAGCCTTTACCAAAATATTTGGTTGCTGATGTACAGATTCCTACTAACTTCATCTTCTGCAATCATCAACTATCAAAATCATATTCCAAAGATCATAATTCTATACACATCTATAGGGAGTCTGCAAGAAACATCTAGGGCCAATATGGTAATCTCCTAAATATAAAGAGAGAGACACAGAGAGATCTTGTGCTACATATAGTAATCCTCCAAGTTTAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGG

mRNA sequence

AAATAAACCATAATCTCTCTCTCTATCTCTATCTCTTTAAAGTTCCACTTCCAATGACTGAAGAAGAAGAAGAGTCTCTGAAAAGAAAAGTGAAACAAGTTGTTGAAGGAGACATAAATGAGGCTGAAATTTTGAGAAATGGAGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAATTGGCTCAAGTTATTGCCATTCATGGTGCAAAAAGGTGGAAGTCCATTGCAGCTAAAGCAGGTCCATCCCTTTCAACTTTCAACTTCTCCTTTTTCTTTCCAACTTCCCACGCACATATATTCAATGGGTTTCTAAATTTTCCAGGCCTCAATCGTTGTGGGAAGAGTTGCAGACTAAGATGGCTCAATTATCTCAGACCTAACATTAAGAGAGGAAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTTCATAAACTTCTTGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCAGGGCGAACAGATAACGAGATCAAGAACTACTGGAATTCTCATTTGAGCAAAAAAATGAACCAACAGAGTGAAAAAGAAAGAAGGAAAGGGTGTAAAAGAAAAGTGAACACAGAGTCTAGAGAAGAGGAAACGTCTCAAGAACGTGAAAACAGCTCAAACTTGGAGTATGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGACCTGATTTGGAGTGGATGAGTAATTTCCTGTAATTGGGTATCATAAGCAGCAACTATAAAGCTTAGGTTGTTAGTGCACTCTCATGCAAATCATTACTAATTTATCTAAAAATTTAATCGTTTCACTCATAGCCTTTACCAAAATATTTGGTTGCTGATGTACAGATTCCTACTAACTTCATCTTCTGCAATCATCAACTATCAAAATCATATTCCAAAGATCATAATTCTATACACATCTATAGGGAGTCTGCAAGAAACATCTAGGGCCAATATGGTAATCTCCTAAATATAAAGAGAGAGACACAGAGAGATCTTGTGCTACATATAGTAATCCTCCAAGTTTagagagagagagggagagagagggagagagagagagagagagagG

Coding sequence (CDS)

ATGACTGAAGAAGAAGAAGAGTCTCTGAAAAGAAAAGTGAAACAAGTTGTTGAAGGAGACATAAATGAGGCTGAAATTTTGAGAAATGGAGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAATTGGCTCAAGTTATTGCCATTCATGGTGCAAAAAGGTGGAAGTCCATTGCAGCTAAAGCAGGTCCATCCCTTTCAACTTTCAACTTCTCCTTTTtCTTTCCAACTTCCCACGCACATATATTCAATGGGTTTCTAAATTTTCCAGGCCTCAATCGTTGTGGGAAGAGTTGCAGACTAAGATGGCTCAATTATCTCAGACCTAACATTAAGAGAGGAAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTTCATAAACTTCTTGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCAGGGCGAACAGATAACGAGATCAAGAACTACTGGAATTCTCATTTGAGCAAAAAAATGAACCAACAGAGTGAAAAaGAAAGAAGGAAAGGGTGTAAAAGAAAAGTGAACACAGAGTCTAGAGAAGAGGAAACGTCTCAAGAACGTGAAAACAGCTCAAACTTGGAGTATGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGACCTGATTTGGAGTGGATGAGTAATTTCCTGTAA

Protein sequence

MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL*

Homology

[Close]

BLAST of Cucsa.340790 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 3.0e-39
Identity = 88/190 (46.32%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFP 92
           NKGAWT EED KL   I  HG   W+S+   AG                           
Sbjct: 13  NKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAG--------------------------- 72

Query: 93  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 152
            L RCGKSCRLRW+NYLRP++KRGN + +E+DLI++LH LLGN+WSLIA RLPGRTDNEI
Sbjct: 73  -LQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEI 132

Query: 153 KNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFDFSNE 212
           KNYWN+H+ +K+        RKG     +    E +TSQ+  +SS  E   D L    + 
Sbjct: 133 KNYWNTHVKRKL-------LRKGIDPATHRPINETKTSQDSSDSSKTE---DPLVKILSF 164

Query: 213 GPDLEWMSNF 223
           GP LE ++NF
Sbjct: 193 GPQLEKIANF 164

[Close]

BLAST of Cucsa.340790 vs. Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 156.8 bits (395), Expect = 2.9e-37
Identity = 76/133 (57.14%), Postives = 88/133 (66.17%), Query Frame = 1


Query: 31  GVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLN 90
           GV +GAWT++ED  LA  +  HG  +W+ +  KAG                         
Sbjct: 11  GVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAG------------------------- 70

Query: 91  FPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDN 150
              L RCGKSCRLRWLNYLRPNI+RGNIS  EEDLI+RLH+LLGNRWSLIAGRLPGRTDN
Sbjct: 71  ---LRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDN 115

Query: 151 EIKNYWNSHLSKK 164
           EIKNYWNS L ++
Sbjct: 131 EIKNYWNSTLGRR 115

[Close]

BLAST of Cucsa.340790 vs. Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1)

HSP 1 Score: 156.0 bits (393), Expect = 4.9e-37
Identity = 84/195 (43.08%), Postives = 105/195 (53.85%), Query Frame = 1


Query: 29  NGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGF 88
           N    KG WT EED+ L   +  HG   W  IA K G                       
Sbjct: 13  NNEYKKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTG----------------------- 72

Query: 89  LNFPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 148
                L RCGKSCRLRW+NYL PN+KRGN ++QEEDLI+RLHKLLGNRWSLIA R+PGRT
Sbjct: 73  -----LKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRT 132

Query: 149 DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 208
           DN++KNYWN+HLSKK+  + +K ++                + E    SN+   VDN   
Sbjct: 133 DNQVKNYWNTHLSKKLGIKDQKTKQSNGDIVYQINLPNPTETSEETKISNI---VDNNNI 176

Query: 209 FSNEGPDLEWMSNFL 224
             +E  +    SN+L
Sbjct: 193 LGDEIQEDHQGSNYL 176

[Close]

BLAST of Cucsa.340790 vs. Swiss-Prot
Match: MYB5_ARATH (Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1)

HSP 1 Score: 153.7 bits (387), Expect = 2.4e-36
Identity = 79/160 (49.38%), Postives = 95/160 (59.38%), Query Frame = 1


Query: 31  GVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLN 90
           G+ +G WT EED+ L   I   G  RW+S+  +AG                         
Sbjct: 22  GMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAG------------------------- 81

Query: 91  FPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDN 150
              L RCGKSCRLRW+NYLRP++KRG I+  EEDLILRLH+LLGNRWSLIAGR+PGRTDN
Sbjct: 82  ---LLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDN 141

Query: 151 EIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETS 191
           EIKNYWN+HL KK+ +Q    +        N    EEE S
Sbjct: 142 EIKNYWNTHLRKKLLRQGIDPQTHKPLDANNIHKPEEEVS 153

[Close]

BLAST of Cucsa.340790 vs. Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.2e-35
Identity = 72/131 (54.96%), Postives = 83/131 (63.36%), Query Frame = 1


Query: 34  KGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPG 93
           KG WT EED+ L   +  HG   W  IA K G                            
Sbjct: 14  KGLWTVEEDKILMDYVRTHGQGHWNRIAKKTG---------------------------- 73

Query: 94  LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIK 153
           L RCGKSCRLRW+NYL PN+ RGN +DQEEDLI+RLHKLLGNRWSLIA R+PGRTDN++K
Sbjct: 74  LKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVK 116

Query: 154 NYWNSHLSKKM 165
           NYWN+HLSKK+
Sbjct: 134 NYWNTHLSKKL 116

[Close]

BLAST of Cucsa.340790 vs. TrEMBL
Match: A0A061GJK0_THECC (Myb domain protein 23 OS=Theobroma cacao GN=TCM_029126 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 5.7e-61
Identity = 129/200 (64.50%), Postives = 143/200 (71.50%), Query Frame = 1


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNF 91
           VNKGAWTAEED+KLA+VIA+HGAKRWK IA KAG                          
Sbjct: 21  VNKGAWTAEEDRKLAEVIAVHGAKRWKIIAIKAG-------------------------- 80

Query: 92  PGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 151
             LNRCGKSCRLRW+NYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 81  --LNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 140

Query: 152 IKNYWNSHLSKKMNQ---QSEKERRKGCK--RKVNTESRE--EETSQERENSSNLEYDVD 211
           IKNYWNSHLSKK+NQ   QS    R+GCK  ++V   ++E  EE +      SN+ +DVD
Sbjct: 141 IKNYWNSHLSKKINQKEKQSGATTREGCKAQKRVVENAKEVIEENTSRGGEDSNISFDVD 192

Query: 212 NLFDFSNEGP-DLEWMSNFL 224
             FDFSNE P +LEWMS FL
Sbjct: 201 EFFDFSNEDPLNLEWMSRFL 192

[Close]

BLAST of Cucsa.340790 vs. TrEMBL
Match: A5BR18_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029986 PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-59
Identity = 125/220 (56.82%), Postives = 145/220 (65.91%), Query Frame = 1


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAG-----------------PSLSTFNFS 91
           +N+GAWTAEED+KLA+VI +HGAKRWK IA  AG                 P L+   F 
Sbjct: 19  MNRGAWTAEEDRKLAEVIEVHGAKRWKMIATTAGLFVYDATEMKPISIMLYPVLTLMGFW 78

Query: 92  FFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLG 151
           FFF               GLNRCGKSCRLRW+NYLRPNIKRGNISDQEEDLILRLHKLLG
Sbjct: 79  FFFA--------------GLNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLG 138

Query: 152 NRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEK-ERRKGCKRKVNT---------ES 211
           NRWSLIAGRLPGRTDNEIKNYWNSHLSKK+ Q+ +     +GC +   T         E 
Sbjct: 139 NRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQEKQSGGSTRGCSKLQRTRVVEEVNVVEV 198

Query: 212 REEETSQERENSSNLEYDVDNLFDFSNEGP-DLEWMSNFL 224
           + E+TS   +  S + ++VD  FDFS EGP +LEW+S FL
Sbjct: 199 KREDTSNGGDQCSKMNFNVDEFFDFSEEGPLNLEWVSQFL 224

[Close]

BLAST of Cucsa.340790 vs. TrEMBL
Match: M5WVH0_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024533mg PE=4 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 5.4e-59
Identity = 136/251 (54.18%), Postives = 161/251 (64.14%), Query Frame = 1


Query: 1   MTEEEEESLKRKVK--QVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWK 60
           M    EES+KRKVK  + ++G   E        VNKGAWTAEED KLA+VI +HGAKRWK
Sbjct: 1   MAPMTEESIKRKVKAGEAMKGSKRE--------VNKGAWTAEEDHKLAEVIEVHGAKRWK 60

Query: 61  SIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNI 120
           +IA+KAG                            LNRCGKSCRLRWLNYLRPNIKRGNI
Sbjct: 61  TIASKAG----------------------------LNRCGKSCRLRWLNYLRPNIKRGNI 120

Query: 121 SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCK- 180
           SDQEEDLI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK++ Q   KE++ G   
Sbjct: 121 SDQEEDLIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRIIQ---KEKQSGANP 180

Query: 181 -----------------RKVNTESREEETSQE------RENSSNL-EYDVDNLFDFSNEG 224
                            +KV+ E +E+  S+E      +++S N+   DVD+ FDFSNEG
Sbjct: 181 TRQMVSTDQKLSLAEHHQKVHIEMKEDSLSEEGASFASKDSSKNMNNIDVDDFFDFSNEG 212

[Close]

BLAST of Cucsa.340790 vs. TrEMBL
Match: A0A067KX10_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_24705 PE=4 SV=1)

HSP 1 Score: 231.5 bits (589), Expect = 1.0e-57
Identity = 123/206 (59.71%), Postives = 142/206 (68.93%), Query Frame = 1


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNF 91
           +NKGAWTAEED+KLA+VI+IHGAKRWK IAAKAG                          
Sbjct: 36  INKGAWTAEEDRKLAEVISIHGAKRWKIIAAKAG-------------------------- 95

Query: 92  PGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 151
             LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 96  --LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 155

Query: 152 IKNYWNSHLSKKMNQQ----------SEKERRKGCKRKVNTESREEETSQEREN---SSN 211
           IKNYWNSHLSKK+N++          +E+ + +    K+    REE T+    N    S+
Sbjct: 156 IKNYWNSHLSKKINKKEKLQSGANSVAEESKNENKTTKIVEVIREENTTSSNNNGGEDSS 213

Query: 212 LEYDVDNLFDFSNEGP-DLEWMSNFL 224
             ++VD+ FDFSNE P +LEW+S FL
Sbjct: 216 SSFNVDDFFDFSNEDPLNLEWVSQFL 213

[Close]

BLAST of Cucsa.340790 vs. TrEMBL
Match: U5GIF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s06320g PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.7e-57
Identity = 125/201 (62.19%), Postives = 142/201 (70.65%), Query Frame = 1


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFP 92
           NKGAWTAEED+KLA+VIAIHGA++WK+IAAKA                            
Sbjct: 20  NKGAWTAEEDRKLAEVIAIHGARKWKTIAAKAA--------------------------- 79

Query: 93  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 152
            LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI
Sbjct: 80  -LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 139

Query: 153 KNYWNSHLSKKMNQQ------SEKERRKGCKR--KVNTESREEETSQER-ENSSNLEYDV 212
           KNYWNSHLSKK++Q+      S KE  +  K   K N + +E+  S +R E  S L ++ 
Sbjct: 140 KNYWNSHLSKKISQKGKQTGVSTKEDHRVEKNIIKNNLDLKEDNKSSQRGEEESKLNFNA 192

Query: 213 DNLFDFSNEGP-DLEWMSNFL 224
           D+ FDFSNE P +LEWMS FL
Sbjct: 200 DDFFDFSNEDPLNLEWMSRFL 192

[Close]

BLAST of Cucsa.340790 vs. TAIR10
Match: AT4G34990.1 (AT4G34990.1 myb domain protein 32)

HSP 1 Score: 163.3 bits (412), Expect = 1.7e-40
Identity = 88/190 (46.32%), Postives = 110/190 (57.89%), Query Frame = 1


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFP 92
           NKGAWT EED KL   I  HG   W+S+   AG                           
Sbjct: 13  NKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAG--------------------------- 72

Query: 93  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 152
            L RCGKSCRLRW+NYLRP++KRGN + +E+DLI++LH LLGN+WSLIA RLPGRTDNEI
Sbjct: 73  -LQRCGKSCRLRWINYLRPDLKRGNFTLEEDDLIIKLHSLLGNKWSLIATRLPGRTDNEI 132

Query: 153 KNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFDFSNE 212
           KNYWN+H+ +K+        RKG     +    E +TSQ+  +SS  E   D L    + 
Sbjct: 133 KNYWNTHVKRKL-------LRKGIDPATHRPINETKTSQDSSDSSKTE---DPLVKILSF 164

Query: 213 GPDLEWMSNF 223
           GP LE ++NF
Sbjct: 193 GPQLEKIANF 164

[Close]

BLAST of Cucsa.340790 vs. TAIR10
Match: AT5G14750.1 (AT5G14750.1 myb domain protein 66)

HSP 1 Score: 156.0 bits (393), Expect = 2.7e-38
Identity = 84/195 (43.08%), Postives = 105/195 (53.85%), Query Frame = 1


Query: 29  NGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGF 88
           N    KG WT EED+ L   +  HG   W  IA K G                       
Sbjct: 13  NNEYKKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTG----------------------- 72

Query: 89  LNFPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 148
                L RCGKSCRLRW+NYL PN+KRGN ++QEEDLI+RLHKLLGNRWSLIA R+PGRT
Sbjct: 73  -----LKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDLIIRLHKLLGNRWSLIAKRVPGRT 132

Query: 149 DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 208
           DN++KNYWN+HLSKK+  + +K ++                + E    SN+   VDN   
Sbjct: 133 DNQVKNYWNTHLSKKLGIKDQKTKQSNGDIVYQINLPNPTETSEETKISNI---VDNNNI 176

Query: 209 FSNEGPDLEWMSNFL 224
             +E  +    SN+L
Sbjct: 193 LGDEIQEDHQGSNYL 176

[Close]

BLAST of Cucsa.340790 vs. TAIR10
Match: AT3G13540.1 (AT3G13540.1 myb domain protein 5)

HSP 1 Score: 153.7 bits (387), Expect = 1.4e-37
Identity = 79/160 (49.38%), Postives = 95/160 (59.38%), Query Frame = 1


Query: 31  GVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLN 90
           G+ +G WT EED+ L   I   G  RW+S+  +AG                         
Sbjct: 22  GMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAG------------------------- 81

Query: 91  FPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDN 150
              L RCGKSCRLRW+NYLRP++KRG I+  EEDLILRLH+LLGNRWSLIAGR+PGRTDN
Sbjct: 82  ---LLRCGKSCRLRWMNYLRPSVKRGGITSDEEDLILRLHRLLGNRWSLIAGRIPGRTDN 141

Query: 151 EIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETS 191
           EIKNYWN+HL KK+ +Q    +        N    EEE S
Sbjct: 142 EIKNYWNTHLRKKLLRQGIDPQTHKPLDANNIHKPEEEVS 153

[Close]

BLAST of Cucsa.340790 vs. TAIR10
Match: AT5G40330.1 (AT5G40330.1 myb domain protein 23)

HSP 1 Score: 151.4 bits (381), Expect = 6.7e-37
Identity = 72/131 (54.96%), Postives = 83/131 (63.36%), Query Frame = 1


Query: 34  KGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPG 93
           KG WT EED+ L   +  HG   W  IA K G                            
Sbjct: 14  KGLWTVEEDKILMDYVRTHGQGHWNRIAKKTG---------------------------- 73

Query: 94  LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIK 153
           L RCGKSCRLRW+NYL PN+ RGN +DQEEDLI+RLHKLLGNRWSLIA R+PGRTDN++K
Sbjct: 74  LKRCGKSCRLRWMNYLSPNVNRGNFTDQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVK 116

Query: 154 NYWNSHLSKKM 165
           NYWN+HLSKK+
Sbjct: 134 NYWNTHLSKKL 116

[Close]

BLAST of Cucsa.340790 vs. TAIR10
Match: AT5G35550.1 (AT5G35550.1 Duplicated homeodomain-like superfamily protein)

HSP 1 Score: 151.0 bits (380), Expect = 8.8e-37
Identity = 77/158 (48.73%), Postives = 96/158 (60.76%), Query Frame = 1


Query: 27  LRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFN 86
           +R   +N+GAWT  ED+ L   I  HG  +W ++  +AG                     
Sbjct: 9   VRREELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAG--------------------- 68

Query: 87  GFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPG 146
                  L RCGKSCRLRW NYLRP IKRGNIS  EE+LI+RLH LLGNRWSLIAGRLPG
Sbjct: 69  -------LKRCGKSCRLRWKNYLRPGIKRGNISSDEEELIIRLHNLLGNRWSLIAGRLPG 128

Query: 147 RTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTES 185
           RTDNEIKN+WNS+L K++ +   K+ ++  K   N E+
Sbjct: 129 RTDNEIKNHWNSNLRKRLPKTQTKQPKR-IKHSTNNEN 137

[Close]

BLAST of Cucsa.340790 vs. NCBI nr
Match: gi|778686120|ref|XP_011652333.1| (PREDICTED: transcription factor WER-like isoform X1 [Cucumis sativus])

HSP 1 Score: 460.7 bits (1184), Expect = 1.5e-126
Identity = 223/223 (100.00%), Postives = 223/223 (100.00%), Query Frame = 1


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI
Sbjct: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60

Query: 61  AAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISD 120
           AAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISD
Sbjct: 61  AAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISD 120

Query: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 180
           QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV
Sbjct: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 180

Query: 181 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL 224
           NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL
Sbjct: 181 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL 223

[Close]

BLAST of Cucsa.340790 vs. NCBI nr
Match: gi|659128004|ref|XP_008464000.1| (PREDICTED: transcription factor MYB114-like [Cucumis melo])

HSP 1 Score: 385.2 bits (988), Expect = 7.9e-104
Identity = 195/223 (87.44%), Postives = 195/223 (87.44%), Query Frame = 1


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI
Sbjct: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60

Query: 61  AAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISD 120
           AAKAG                            LNRCGKSCRLRWLNYLRPNIKRGNISD
Sbjct: 61  AAKAG----------------------------LNRCGKSCRLRWLNYLRPNIKRGNISD 120

Query: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 180
           QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV
Sbjct: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 180

Query: 181 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL 224
           NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL
Sbjct: 181 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL 195

[Close]

BLAST of Cucsa.340790 vs. NCBI nr
Match: gi|590620738|ref|XP_007024617.1| (Myb domain protein 23 [Theobroma cacao])

HSP 1 Score: 242.3 bits (617), Expect = 8.2e-61
Identity = 129/200 (64.50%), Postives = 143/200 (71.50%), Query Frame = 1


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGPSLSTFNFSFFFPTSHAHIFNGFLNF 91
           VNKGAWTAEED+KLA+VIA+HGAKRWK IA KAG                          
Sbjct: 21  VNKGAWTAEEDRKLAEVIAVHGAKRWKIIAIKAG-------------------------- 80

Query: 92  PGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 151
             LNRCGKSCRLRW+NYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE
Sbjct: 81  --LNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNE 140

Query: 152 IKNYWNSHLSKKMNQ---QSEKERRKGCK--RKVNTESRE--EETSQERENSSNLEYDVD 211
           IKNYWNSHLSKK+NQ   QS    R+GCK  ++V   ++E  EE +      SN+ +DVD
Sbjct: 141 IKNYWNSHLSKKINQKEKQSGATTREGCKAQKRVVENAKEVIEENTSRGGEDSNISFDVD 192

Query: 212 NLFDFSNEGP-DLEWMSNFL 224
             FDFSNE P +LEWMS FL
Sbjct: 201 EFFDFSNEDPLNLEWMSRFL 192

[Close]

BLAST of Cucsa.340790 vs. NCBI nr
Match: gi|470140025|ref|XP_004305745.1| (PREDICTED: transcription factor WER-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 236.9 bits (603), Expect = 3.5e-59
Identity = 137/258 (53.10%), Postives = 162/258 (62.79%), Query Frame = 1


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           M  + EES KR+V ++   +       R   VNKGAWTAEEDQKLA+VIAIHGAK+WKSI
Sbjct: 1   MAPKREESAKREVMKMKSLEAVMKNTKRE--VNKGAWTAEEDQKLAEVIAIHGAKKWKSI 60

Query: 61  AAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISD 120
           AAKAG                            LNRCGKSCRLRWLNYLRPNIKRGNISD
Sbjct: 61  AAKAG----------------------------LNRCGKSCRLRWLNYLRPNIKRGNISD 120

Query: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKER-------- 180
           QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSK+++ Q EK+R        
Sbjct: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKRIS-QIEKQRSTGETDDS 180

Query: 181 -------------RKGCKRKVNTESREEETSQE-------------RENSSNLEYDVDNL 224
                        R G + K+  E +++ +S+E              E+ SN + D+D+ 
Sbjct: 181 TRQIPTVDQKPSSRLGEQNKIFGEMKQDSSSEEGTTTSASNKGGDDHEDYSNSDIDIDDF 227

[Close]

BLAST of Cucsa.340790 vs. NCBI nr
Match: gi|147832539|emb|CAN74896.1| (hypothetical protein VITISV_029986 [Vitis vinifera])

HSP 1 Score: 235.7 bits (600), Expect = 7.7e-59
Identity = 125/220 (56.82%), Postives = 145/220 (65.91%), Query Frame = 1


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAG-----------------PSLSTFNFS 91
           +N+GAWTAEED+KLA+VI +HGAKRWK IA  AG                 P L+   F 
Sbjct: 19  MNRGAWTAEEDRKLAEVIEVHGAKRWKMIATTAGLFVYDATEMKPISIMLYPVLTLMGFW 78

Query: 92  FFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLG 151
           FFF               GLNRCGKSCRLRW+NYLRPNIKRGNISDQEEDLILRLHKLLG
Sbjct: 79  FFFA--------------GLNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLG 138

Query: 152 NRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEK-ERRKGCKRKVNT---------ES 211
           NRWSLIAGRLPGRTDNEIKNYWNSHLSKK+ Q+ +     +GC +   T         E 
Sbjct: 139 NRWSLIAGRLPGRTDNEIKNYWNSHLSKKIKQEKQSGGSTRGCSKLQRTRVVEEVNVVEV 198

Query: 212 REEETSQERENSSNLEYDVDNLFDFSNEGP-DLEWMSNFL 224
           + E+TS   +  S + ++VD  FDFS EGP +LEW+S FL
Sbjct: 199 KREDTSNGGDQCSKMNFNVDEFFDFSEEGPLNLEWVSQFL 224

The following BLAST results are available for this feature:

BLAST of Cucsa.340790 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB32_ARATH	3.0e-39	46.32	Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1	[more]
MYBC_MAIZE	2.9e-37	57.14	Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1	[more]
WER_ARATH	4.9e-37	43.08	Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1	[more]
MYB5_ARATH	2.4e-36	49.38	Transcription repressor MYB5 OS=Arabidopsis thaliana GN=MYB5 PE=1 SV=1	[more]
MYB23_ARATH	1.2e-35	54.96	Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1	[more]

BLAST of Cucsa.340790 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061GJK0_THECC	5.7e-61	64.50	Myb domain protein 23 OS=Theobroma cacao GN=TCM_029126 PE=4 SV=1	[more]
A5BR18_VITVI	5.4e-59	56.82	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_029986 PE=4 SV=1	[more]
M5WVH0_PRUPE	5.4e-59	54.18	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024533mg PE=4 SV=1	[more]
A0A067KX10_JATCU	1.0e-57	59.71	MYB family protein OS=Jatropha curcas GN=JCGZ_24705 PE=4 SV=1	[more]
U5GIF8_POPTR	1.7e-57	62.19	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s06320g PE=4 SV=1	[more]

BLAST of Cucsa.340790 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34990.1	1.7e-40	46.32	myb domain protein 32	[more]
AT5G14750.1	2.7e-38	43.08	myb domain protein 66	[more]
AT3G13540.1	1.4e-37	49.38	myb domain protein 5	[more]
AT5G40330.1	6.7e-37	54.96	myb domain protein 23	[more]
AT5G35550.1	8.8e-37	48.73	Duplicated homeodomain-like superfamily protein	[more]

BLAST of Cucsa.340790 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778686120\|ref\|XP_011652333.1\|	1.5e-126	100.00	PREDICTED: transcription factor WER-like isoform X1 [Cucumis sativus]	[more]
gi\|659128004\|ref\|XP_008464000.1\|	7.9e-104	87.44	PREDICTED: transcription factor MYB114-like [Cucumis melo]	[more]
gi\|590620738\|ref\|XP_007024617.1\|	8.2e-61	64.50	Myb domain protein 23 [Theobroma cacao]	[more]
gi\|470140025\|ref\|XP_004305745.1\|	3.5e-59	53.10	PREDICTED: transcription factor WER-like [Fragaria vesca subsp. vesca]	[more]
gi\|147832539\|emb\|CAN74896.1\|	7.7e-59	56.82	hypothetical protein VITISV_029986 [Vitis vinifera]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.340790.1	Cucsa.340790.1	mRNA
Cucsa.340790.2	Cucsa.340790.2	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 34..81 score: 1.6E-19coord: 87..132 score: 1.6
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 86..134 score: 1.9E-15coord: 33..83 score: 5.0
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 89..137 score: 3.2E-25coord: 35..88 score: 2.7
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 32..128 score: 5.35
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 86..136 score: 20.433coord: 29..85 score: 25
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 10..186 score: 4.0
None	No IPR available	PANTHER	PTHR10641:SF580	SUBFAMILY NOT NAMED	coord: 10..186 score: 4.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.340790	Cla012581	Watermelon (97103) v1	cgywmB611
Cucsa.340790	ClCG07G014040	Watermelon (Charleston Gray)	cgywcgB589
Cucsa.340790	CSPI03G41040	Wild cucumber (PI 183967)	cgycpiB504
Cucsa.340790	CmaCh01G000400	Cucurbita maxima (Rimu)	cgycmaB0935
Cucsa.340790	CmoCh01G000450	Cucurbita moschata (Rifu)	cgycmoB0935
Cucsa.340790	CmoCh14G012670	Cucurbita moschata (Rifu)	cgycmoB0927
Cucsa.340790	Lsi07G006140	Bottle gourd (USVL1VR-Ls)	cgylsiB556
Cucsa.340790	Cp4.1LG02g17570	Cucurbita pepo (Zucchini)	cgycpeB0886
Cucsa.340790	MELO3C030841.2	Melon (DHL92) v3.6.1	cgymedB561
Cucsa.340790	CsaV3_3G043510	Cucumber (Chinese Long) v3	cgycucB523
Cucsa.340790	Cla97C07G140810	Watermelon (97103) v2	cgywmbB589
Cucsa.340790	Bhi01G002182	Wax gourd	cgywgoB682
Cucsa.340790	Carg06414	Silver-seed gourd	carcgyB0144

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.340790	Cucumber (Chinese Long) v2	cgycuB478