Cp4.1LG02g17570 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AGAGAAATTAGGAATAAGAAAACTTAAAACCAATCAAATTGTAAATTCATGCAATTCTGATCATAAAAAATAAAAAGGAGTTTTGATCTTCTCTCCTTTCTATGGCTCTGAAAAAGTTATATTCTTTCAACACAAAACACTTTTCTGTTCTCTGCTTCCTTATTTTTCACTTTGTCCTCCATGTATAGCCATTCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAACTCATGTGCTCCCCTTCTTCTATTATTGTGGTTTCTTCTCCAAATTCGAGGCATTTCTCCCTCTAAAACGCCTTTCTTTCCCTCTTGTTTCTGATTTTCATGAGAGTTCCTGACTTCCATTTGTTCAAAATAATTCAACAAGATTGATGGGATAATACATTGTTTCGGTGGGGGCCATGGGAGTGGTACCAAATGTTCGACGACATCAACTCTTAACAACTGCTGGATATGATCTTGAGCTTTGTGCTTTGTCGTCCGGAGGAGAACAACTTGATTCTGTGGCTAAAGACCTTATAAATCACAACTTAGTGATGAAGATCATGGTATATGATTCTAAAAATATAACAACATGGGCTATTTGAGATTCAAAATTTAAATACCTATTCTAACAGAACAACCATCTGATCCTATCCCGTTGTATTTGTTGTCCAGAAAAATCTTAGGATATTAAATTTTGCTCAAGTAAAAAAGAAAAAGAAAAAAAAGAGAAGATTAGAAAATATCATTAGAATTTTGATGTGAAGGAAATGATAATAACACCAATAATCCATTTTTTTTAAAGAGGATCTTTTGCTAGCTGTTGTCTGTTGAGTTGTACAACAGTGAGCAACTATTTAGAAGCAGACTTTATATCTCACTCAATCATCGACCTCATGATCAGAGTGTCCTTTTCCTGAAAGACTGCCACCTCCAAAAAATTATTCCAACCTCTTCACATATATCTCTAATTCCCACCTCCGGTCTCCGTTATAGTTTCACATCTTTAAGAGAAATAAAGCACTCCTCTAACACATAATCCCCCCTCTCTCTCTCCCCCCTAAAGTTCCAATGACTGAAGAAGACTCTGTGAAAAGAAAAGTGAAACAAGTTGAAGGAGACATAAATGAGGCTGAAAATGTGAGAAATGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAAGTTATTGCCATTCATGGAGCGAAAAGGTGGAAGACGATTGCAGCCAAAGCAGGTGCTGCTTCACTCCTTTTTCAACTTCTGTTTTCCAACTTCAGCTGCAAAGCAAATTTGGCTCAATGGGTTTCTGAAATCTTGCAGGTCTCAATCGGTGTGGGAAAAGTTGCAGATTAAGATGGCTGAATTATCTCAGACCTAACATTAAGAGAGGCAATATATCAGATCAAGAGGAAGATTTGATTCTCAGACTCCATAAACTTCTCGGCAACAGGTCACATTCTTACCTAATTCGCTCTGCAATTTTCTCGTTTCAGTTATCTTCTGTTTCATAATCTGAAAAGGAGTTTTGATTTTCTGGGTTGGGGGGAGTGCCTGATTGGTTTTTTTCAGGTGGTCTTTGATTGCTGGGAGACTGCCCGGGAGAACGGATAACGAGATAAAGAATTATTGGAATTCTCATTTGAGCAAGAAAATGAACCAACATAGTGAAAAAGAAAGTGACATTCTCAAAAGAAAAGGGTGTAAAAGGAAGGTAGACACAGAGTTGAGGGAAGAGGAAACATCTCAAGAATTTGAAAGCAGCTCGAACTTGGAGTTTGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTCTAATTGGATATCATAAGCAGTAACTATAAGCTTAGGTTGTTAGTGCACTGCACTCTCATTCAAATCATTAGTCATTTATCTAAAATTTTATTGTTTCATTCATAGCCTTCTCCAAGTATTTGGTTGCGGATGAACTGGTTCCAACTTACTTGATCTTGCTCTATCTACTCTACCTGCGATCAACTATCAAAATATCATATTCCAAACTCCAAAGATTGTAACTCTTTAAACTTCTCCCAGTGTAGTGAAAGACAAGAAAGTTCGACCGTAGGAACCAGCAAGAAACAGCTAGCGTGAATATGGAAATCTCCTAAATTTAGAGGGAGAGAGAGAGTTTGTGCTACATATAGTAATCCCTC AGAGAAATTAGGAATAAGAAAACTTAAAACCAATCAAATTGTAAATTCATGCAATTCTGATCATAAAAAATAAAAAGGAGTTTTGATCTTCTCTCCTTTCTATGGCTCTGAAAAAGTTATATTCTTTCAACACAAAACACTTTTCTGTTCTCTGCTTCCTTATTTTTCACTTTGTCCTCCATGTATAGCCATTCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTAAAACTCATGTGCTCCCCTTCTTCTATTATTGTGGTTTCTTCTCCAAATTCGAGGCATTTCTCCCTCTAAAACGCCTTTCTTTCCCTCTTGTTTCTGATTTTCATGAGAGTTCCTGACTTCCATTTGTTCAAAATAATTCAACAAGATTGATGGGATAATACATTGTTTCGGTGGGGGCCATGGGAGTGGTACCAAATGTTCGACGACATCAACTCTTAACAACTGCTGGATATGATCTTGAGCTTTGTGCTTTGTCGTCCGGAGGAGAACAACTTGATTCTGTGGCTAAAGACCTTATAAATCACAACTTAGTGATGAAGATCATGGTATATGATTCTAAAAATATAACAACATGGGCTATTTGAGATTCAAAATTTAAATACCTATTCTAACAGAACAACCATCTGATCCTATCCCGTTGTATTTGTTGTCCAGAAAAATCTTAGGATATTAAATTTTGCTCAAGTAAAAAAGAAAAAGAAAAAAAAGAGAAGATTAGAAAATATCATTAGAATTTTGATGTGAAGGAAATGATAATAACACCAATAATCCATTTTTTTTAAAGAGGATCTTTTGCTAGCTGTTGTCTGTTGAGTTGTACAACAGTGAGCAACTATTTAGAAGCAGACTTTATATCTCACTCAATCATCGACCTCATGATCAGAGTGTCCTTTTCCTGAAAGACTGCCACCTCCAAAAAATTATTCCAACCTCTTCACATATATCTCTAATTCCCACCTCCGGTCTCCGTTATAGTTTCACATCTTTAAGAGAAATAAAGCACTCCTCTAACACATAATCCCCCCTCTCTCTCTCCCCCCTAAAGTTCCAATGACTGAAGAAGACTCTGTGAAAAGAAAAGTGAAACAAGTTGAAGGAGACATAAATGAGGCTGAAAATGTGAGAAATGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAAGTTATTGCCATTCATGGAGCGAAAAGGTGGAAGACGATTGCAGCCAAAGCAGGTCTCAATCGGTGTGGGAAAAGTTGCAGATTAAGATGGCTGAATTATCTCAGACCTAACATTAAGAGAGGCAATATATCAGATCAAGAGGAAGATTTGATTCTCAGACTCCATAAACTTCTCGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCCGGGAGAACGGATAACGAGATAAAGAATTATTGGAATTCTCATTTGAGCAAGAAAATGAACCAACATAGTGAAAAAGAAAGTGACATTCTCAAAAGAAAAGGGTGTAAAAGGAAGGTAGACACAGAGTTGAGGGAAGAGGAAACATCTCAAGAATTTGAAAGCAGCTCGAACTTGGAGTTTGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTCTAATTGGATATCATAAGCAGTAACTATAAGCTTAGGTTGTTAGTGCACTGCACTCTCATTCAAATCATTAGTCATTTATCTAAAATTTTATTGTTTCATTCATAGCCTTCTCCAAGTATTTGGTTGCGGATGAACTGGTTCCAACTTACTTGATCTTGCTCTATCTACTCTACCTGCGATCAACTATCAAAATATCATATTCCAAACTCCAAAGATTGTAACTCTTTAAACTTCTCCCAGTGTAGTGAAAGACAAGAAAGTTCGACCGTAGGAACCAGCAAGAAACAGCTAGCGTGAATATGGAAATCTCCTAAATTTAGAGGGAGAGAGAGAGTTTGTGCTACATATAGTAATCCCTC ATGACTGAAGAAGACTCTGTGAAAAGAAAAGTGAAACAAGTTGAAGGAGACATAAATGAGGCTGAAAATGTGAGAAATGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAACTGGCTGAAGTTATTGCCATTCATGGAGCGAAAAGGTGGAAGACGATTGCAGCCAAAGCAGGTCTCAATCGGTGTGGGAAAAGTTGCAGATTAAGATGGCTGAATTATCTCAGACCTAACATTAAGAGAGGCAATATATCAGATCAAGAGGAAGATTTGATTCTCAGACTCCATAAACTTCTCGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCCGGGAGAACGGATAACGAGATAAAGAATTATTGGAATTCTCATTTGAGCAAGAAAATGAACCAACATAGTGAAAAAGAAAGTGACATTCTCAAAAGAAAAGGGTGTAAAAGGAAGGTAGACACAGAGTTGAGGGAAGAGGAAACATCTCAAGAATTTGAAAGCAGCTCGAACTTGGAGTTTGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGGCCTGATTTGGAGTGGATGAGTAAATTCCTCTAA MTEEDSVKRKVKQVEGDINEAENVRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQHSEKESDILKRKGCKRKVDTELREEETSQEFESSSNLEFDVDNLFDFSNEGPDLEWMSKFL
BLAST of Cp4.1LG02g17570 vs. Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 9.7e-42 Identity = 76/107 (71.03%), Postives = 89/107 (83.18%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. Swiss-Prot
Match: MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana GN=MYB32 PE=2 SV=1) HSP 1 Score: 168.7 bits (426), Expect = 6.3e-41 Identity = 87/170 (51.18%), Postives = 110/170 (64.71%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. Swiss-Prot
Match: WER_ARATH (Transcription factor WER OS=Arabidopsis thaliana GN=WER PE=1 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. Swiss-Prot
Match: MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana GN=MYB23 PE=1 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 1.8e-40 Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. Swiss-Prot
Match: MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana GN=MYB6 PE=1 SV=1) HSP 1 Score: 165.6 bits (418), Expect = 5.3e-40 Identity = 70/107 (65.42%), Postives = 88/107 (82.24%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TrEMBL
Match: A0A061GJK0_THECC (Myb domain protein 23 OS=Theobroma cacao GN=TCM_029126 PE=4 SV=1) HSP 1 Score: 258.1 bits (658), Expect = 8.8e-66 Identity = 140/186 (75.27%), Postives = 153/186 (82.26%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TrEMBL
Match: U5GIF8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0003s06320g PE=4 SV=1) HSP 1 Score: 248.4 bits (633), Expect = 7.0e-63 Identity = 129/185 (69.73%), Postives = 148/185 (80.00%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TrEMBL
Match: Q94FG5_GOSRA (Myb-like transcription factor Myb 3 (Fragment) OS=Gossypium raimondii PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62 Identity = 128/176 (72.73%), Postives = 142/176 (80.68%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TrEMBL
Match: A0A0D2TK28_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_009G146500 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 1.6e-62 Identity = 129/179 (72.07%), Postives = 143/179 (79.89%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TrEMBL
Match: Q94FG3_GOSHI (Myb-like transcription factor Myb 3 OS=Gossypium hirsutum PE=4 SV=1) HSP 1 Score: 246.1 bits (627), Expect = 3.5e-62 Identity = 128/179 (71.51%), Postives = 143/179 (79.89%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TAIR10
Match: AT4G34990.1 (AT4G34990.1 myb domain protein 32) HSP 1 Score: 168.7 bits (426), Expect = 3.6e-42 Identity = 87/170 (51.18%), Postives = 110/170 (64.71%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TAIR10
Match: AT5G14750.1 (AT5G14750.1 myb domain protein 66) HSP 1 Score: 167.9 bits (424), Expect = 6.1e-42 Identity = 74/113 (65.49%), Postives = 88/113 (77.88%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TAIR10
Match: AT5G40330.1 (AT5G40330.1 myb domain protein 23) HSP 1 Score: 167.2 bits (422), Expect = 1.0e-41 Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TAIR10
Match: AT4G09460.1 (AT4G09460.1 myb domain protein 6) HSP 1 Score: 165.6 bits (418), Expect = 3.0e-41 Identity = 70/107 (65.42%), Postives = 88/107 (82.24%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. TAIR10
Match: AT3G13540.1 (AT3G13540.1 myb domain protein 5) HSP 1 Score: 164.9 bits (416), Expect = 5.1e-41 Identity = 72/106 (67.92%), Postives = 87/106 (82.08%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. NCBI nr
Match: gi|659128004|ref|XP_008464000.1| (PREDICTED: transcription factor MYB114-like [Cucumis melo]) HSP 1 Score: 338.2 bits (866), Expect = 9.6e-90 Identity = 175/195 (89.74%), Postives = 184/195 (94.36%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. NCBI nr
Match: gi|778686120|ref|XP_011652333.1| (PREDICTED: transcription factor WER-like isoform X1 [Cucumis sativus]) HSP 1 Score: 323.2 bits (827), Expect = 3.2e-85 Identity = 175/223 (78.48%), Postives = 184/223 (82.51%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. NCBI nr
Match: gi|590620738|ref|XP_007024617.1| (Myb domain protein 23 [Theobroma cacao]) HSP 1 Score: 258.1 bits (658), Expect = 1.3e-65 Identity = 140/186 (75.27%), Postives = 153/186 (82.26%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. NCBI nr
Match: gi|743881269|ref|XP_011036426.1| (PREDICTED: transcription factor MYB114-like [Populus euphratica]) HSP 1 Score: 253.4 bits (646), Expect = 3.1e-64 Identity = 132/185 (71.35%), Postives = 149/185 (80.54%), Query Frame = 1
BLAST of Cp4.1LG02g17570 vs. NCBI nr
Match: gi|694393823|ref|XP_009372337.1| (PREDICTED: transcription factor MYB114-like [Pyrus x bretschneideri]) HSP 1 Score: 250.4 bits (638), Expect = 2.6e-63 Identity = 135/213 (63.38%), Postives = 161/213 (75.59%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |