CsaV3_3G043510 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_3G043510
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	MYB transcription factor
Location	chr3 : 35356454 .. 35358211 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TATATATATATATATATATATATAATAAATAGATGCTGGTTAAATCCAGAGTCTTTGAATTTTATATGCATAGAAAACAATATGGAGAAAATAATAATAAGAATCCCAATTTCTTAAACAGGATATTTTGCTAGCTGTTGTGTTGTTGTTGAGTTGTAAAACAGTGTGCAACTATTTAGAAGCAGACTTTATATCTCACTCAATCATCTACCTCATGATCAGAGTGTCCTTTTCCTGAAAGACTGCCAACCCATAAATTATTCCAATTTCTTCATATATATCTCTAATTGCTTCTTCACATCTCTATTATATTTTCACCCTCTAAGAAGAGAAAATAAACCATAATCTCTCTCTCTATCTCTATCTCTTTAAAGTTCCACTTCCAATGACTGAAGAAGAAGAAGAGTCTCTGAAAAGAAAAGTGAAACAAGTTGTTGAAGGAGACATAAATGAGGCTGAAATTTTGAGAAATGGAGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAATTGGCTCAAGTTATTGCCATTCATGGTGCAAAAAGGTGGAAGTCCATTGCAGCTAAAGCAGGTCCATCCCTTTCAACTTTCAACTTCTCCTTTTTCTTTCCAACTTCCCACGCACATATATTCAATGGGTTTCTAAATTTTCCAGGCCTCAATCGTTGTGGGAAGAGTTGCAGACTAAGATGGCTCAATTATCTCAGACCTAACATTAAGAGAGGAAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTTCATAAACTTCTTGGCAACAGGTCAAATTTTCTATCCCCTTTCATTCTATATTTCTCAACTTTTCTTGCTTTCATTAACTTAATAAAAGTTTTGGTTTTCGGAGTTTAGGTGGTCTTTGATTGCTGGGAGACTGCCAGGGCGAACAGATAACGAGATCAAGAACTACTGGAATTCTCATTTGAGCAAAAAAATGAACCAACAGAGTGAAAAAGAAAGAAGGAAAGGGTGTAAAAGAAAAGTGAACACAGAGTCTAGAGAAGAGGAAACGTCTCAAGAACGTGAAAACAGCTCAAACTTGGAGTATGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGACCTGATTTGGAGTGGATGAGTAATTTCCTGTAATTGGGTATCATAAGCAGCAACTATAAAGCTTAGGTTGTTAGTGCACTCTCATGCAAATCATTACTAATTTATCTAAAAATTTAATCGTTTCACTCATAGCCTTTACCAAAATATTTGGTTGCTGATGTACAGATTCCTACTAACTTCATCTTCTGCAATCATCAACTATCAAAATCATATTCCAAAGATCATAATTCTATACACATCTATAGGGAGTCTGCAAGAAACATCTAGGGCCAATATGGTAATCTCCTAAATATAAAGAGAGAGACACAGAGAGATCTTGTGCTACATATAGTAATCCTCCAAGTTTAGAGAGAGAGAGGGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGGGAACTTGCTAGTGCACTCATTAAGAGGGGATGGTTTAAGTTTCTAGATTTTGCCTCATAATCCGATGTTGTGGTGGGGATATGAAAAGAATCATTCTGAAAGACAAGAAAAACAAAATACTCACTTTCTGTCACGAGCTTAGTCCAAATTTTCAGATGGTCAGAATCAGACAAATAGTGCTGACCAGCATTCCTCCACCACATAACACTCAGCCACATATGGTCTTTTGGTCAGCGTCTATATCTTGTCAACC

mRNA sequence

ATGACTGAAGAAGAAGAAGAGTCTCTGAAAAGAAAAGTGAAACAAGTTGTTGAAGGAGACATAAATGAGGCTGAAATTTTGAGAAATGGAGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAATTGGCTCAAGTTATTGCCATTCATGGTGCAAAAAGGTGGAAGTCCATTGCAGCTAAAGCAGGCCTCAATCGTTGTGGGAAGAGTTGCAGACTAAGATGGCTCAATTATCTCAGACCTAACATTAAGAGAGGAAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTTCATAAACTTCTTGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCAGGGCGAACAGATAACGAGATCAAGAACTACTGGAATTCTCATTTGAGCAAAAAAATGAACCAACAGAGTGAAAAAGAAAGAAGGAAAGGGTGTAAAAGAAAAGTGAACACAGAGTCTAGAGAAGAGGAAACGTCTCAAGAACGTGAAAACAGCTCAAACTTGGAGTATGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGACCTGATTTGGAGTGGATGAGTAATTTCCTGTAA

Coding sequence (CDS)

ATGACTGAAGAAGAAGAAGAGTCTCTGAAAAGAAAAGTGAAACAAGTTGTTGAAGGAGACATAAATGAGGCTGAAATTTTGAGAAATGGAGGAGTCAATAAAGGCGCTTGGACTGCAGAAGAAGATCAAAAATTGGCTCAAGTTATTGCCATTCATGGTGCAAAAAGGTGGAAGTCCATTGCAGCTAAAGCAGGCCTCAATCGTTGTGGGAAGAGTTGCAGACTAAGATGGCTCAATTATCTCAGACCTAACATTAAGAGAGGAAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTTCATAAACTTCTTGGCAACAGGTGGTCTTTGATTGCTGGGAGACTGCCAGGGCGAACAGATAACGAGATCAAGAACTACTGGAATTCTCATTTGAGCAAAAAAATGAACCAACAGAGTGAAAAAGAAAGAAGGAAAGGGTGTAAAAGAAAAGTGAACACAGAGTCTAGAGAAGAGGAAACGTCTCAAGAACGTGAAAACAGCTCAAACTTGGAGTATGATGTCGATAACTTGTTTGATTTTTCCAATGAGGGACCTGATTTGGAGTGGATGAGTAATTTCCTGTAA

Protein sequence

MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL

Homology

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BLAST of CsaV3_3G043510 vs. NCBI nr
Match: XP_008464000.1 (PREDICTED: transcription factor MYB114-like [Cucumis melo] >XP_004151013.2 PREDICTED: transcription factor MYB114-like isoform X2 [Cucumis sativus])

HSP 1 Score: 384.8 bits (987), Expect = 1.7e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI
Sbjct: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60

Query: 61  AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 120
           AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT
Sbjct: 61  AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 120

Query: 121 DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 180
           DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD
Sbjct: 121 DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 180

Query: 181 FSNEGPDLEWMSNFL 196
           FSNEGPDLEWMSNFL
Sbjct: 181 FSNEGPDLEWMSNFL 195

[Close]

BLAST of CsaV3_3G043510 vs. NCBI nr
Match: XP_011652333.1 (PREDICTED: transcription factor WER-like isoform X1 [Cucumis sativus])

HSP 1 Score: 369.8 bits (948), Expect = 5.8e-99
Identity = 195/223 (87.44%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI
Sbjct: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60

Query: 61  AAKA----------------------------GLNRCGKSCRLRWLNYLRPNIKRGNISD 120
           AAKA                            GLNRCGKSCRLRWLNYLRPNIKRGNISD
Sbjct: 61  AAKAGPSLSTFNFSFFFPTSHAHIFNGFLNFPGLNRCGKSCRLRWLNYLRPNIKRGNISD 120

Query: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 180
           QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV
Sbjct: 121 QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 180

Query: 181 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL 196
           NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL
Sbjct: 181 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNFL 223

[Close]

BLAST of CsaV3_3G043510 vs. NCBI nr
Match: XP_022980725.1 (transcription factor MYB114-like [Cucurbita maxima])

HSP 1 Score: 339.0 bits (868), Expect = 1.1e-89
Identity = 176/195 (90.26%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 5   EEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKA 64
           EEES+KRKV Q VEGDINEAE +RNGGVNKGAWTAEEDQKLA+VI+IHGAKRWKSIAAKA
Sbjct: 3   EEESVKRKVSQ-VEGDINEAENMRNGGVNKGAWTAEEDQKLAEVISIHGAKRWKSIAAKA 62

Query: 65  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 124
           GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI
Sbjct: 63  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 122

Query: 125 KNYWNSHLSKKMNQQSEKE----RRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 184
           KNYWNSHLSKK+N QSEKE    +RK CKRKV+T SREEETSQE ENSSNLEYDVDNLFD
Sbjct: 123 KNYWNSHLSKKLNLQSEKESDILKRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLFD 182

Query: 185 FSNEGPDLEWMSNFL 196
           FSNEGPDLEWMS FL
Sbjct: 183 FSNEGPDLEWMSKFL 196

[Close]

BLAST of CsaV3_3G043510 vs. NCBI nr
Match: XP_023526052.1 (transcription factor MYB114-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 339.0 bits (868), Expect = 1.1e-89
Identity = 176/195 (90.26%), Postives = 183/195 (93.85%), Query Frame = 0


Query: 5   EEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKA 64
           EEES+KRKV Q VEGDINEAE +RNGGVNKGAWTAEEDQKLA+VIAIHGAKRWKSIAAKA
Sbjct: 3   EEESVKRKVSQ-VEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAKA 62

Query: 65  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 124
           GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI
Sbjct: 63  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 122

Query: 125 KNYWNSHLSKKMNQQSEKE----RRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 184
           KNYWNSHLSKK+N QSEKE    +RK CKRKV+T SREEETSQE ENS+NLEYDVDNLFD
Sbjct: 123 KNYWNSHLSKKLNLQSEKESDILKRKVCKRKVDTGSREEETSQECENSTNLEYDVDNLFD 182

Query: 185 FSNEGPDLEWMSNFL 196
           FSNEGPDLEWMS FL
Sbjct: 183 FSNEGPDLEWMSKFL 196

[Close]

BLAST of CsaV3_3G043510 vs. NCBI nr
Match: XP_022955558.1 (transcription factor MYB114-like [Cucurbita moschata])

HSP 1 Score: 338.2 bits (866), Expect = 1.9e-89
Identity = 176/195 (90.26%), Postives = 182/195 (93.33%), Query Frame = 0


Query: 5   EEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKA 64
           EEES+KRKV Q VEGDINEAE +RNGGVNKGAWTAEEDQKLA+VIAIHGAKRWKSIAAKA
Sbjct: 3   EEESVKRKVSQ-VEGDINEAENMRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAKA 62

Query: 65  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 124
           GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI
Sbjct: 63  GLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEI 122

Query: 125 KNYWNSHLSKKMNQQSEKE----RRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 184
           KNYWNSHLSKK+N QSE+E     RK CKRKV+T SREEETSQE ENSSNLEYDVDNLFD
Sbjct: 123 KNYWNSHLSKKLNLQSERESDILNRKVCKRKVDTGSREEETSQECENSSNLEYDVDNLFD 182

Query: 185 FSNEGPDLEWMSNFL 196
           FSNEGPDLEWMS FL
Sbjct: 183 FSNEGPDLEWMSKFL 196

[Close]

BLAST of CsaV3_3G043510 vs. TAIR10
Match: AT4G34990.1 (myb domain protein 32)

HSP 1 Score: 169.9 bits (429), Expect = 1.6e-42
Identity = 88/162 (54.32%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISD 92
           NKGAWT EED KL   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN + 
Sbjct: 13  NKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTL 72

Query: 93  QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 152
           +E+DLI++LH LLGN+WSLIA RLPGRTDNEIKNYWN+H+ +K+        RKG     
Sbjct: 73  EEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKL-------LRKGIDPAT 132

Query: 153 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNF 195
           +    E +TSQ+  +SS  E   D L    + GP LE ++NF
Sbjct: 133 HRPINETKTSQDSSDSSKTE---DPLVKILSFGPQLEKIANF 164

[Close]

BLAST of CsaV3_3G043510 vs. TAIR10
Match: AT5G40330.1 (myb domain protein 23)

HSP 1 Score: 166.4 bits (420), Expect = 1.8e-41
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 34  KGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQ 93
           KG WT EED+ L   +  HG   W  IA K GL RCGKSCRLRW+NYL PN+ RGN +DQ
Sbjct: 14  KGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQ 73

Query: 94  EEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKM 137
           EEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLSKK+
Sbjct: 74  EEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 116

[Close]

BLAST of CsaV3_3G043510 vs. TAIR10
Match: AT1G22640.1 (myb domain protein 3)

HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41
Identity = 70/105 (66.67%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 91
           +NKGAWT EEDQ L   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN +
Sbjct: 12  MNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFT 71

Query: 92  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKM 137
           ++E++LI++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +K+
Sbjct: 72  EEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CsaV3_3G043510 vs. TAIR10
Match: AT4G09460.1 (myb domain protein 6)

HSP 1 Score: 164.9 bits (416), Expect = 5.2e-41
Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISD 92
           NKGAWT EEDQ+L   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN +D
Sbjct: 13  NKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTD 72

Query: 93  QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKM 137
            E+ +I++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +K+
Sbjct: 73  DEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CsaV3_3G043510 vs. TAIR10
Match: AT1G66380.1 (myb domain protein 114)

HSP 1 Score: 164.5 bits (415), Expect = 6.7e-41
Identity = 74/105 (70.48%), Postives = 85/105 (80.95%), Query Frame = 0


Query: 31  GVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNI 90
           G+ KGAWTAEED  L Q I  +G  +W  +  +AGLNRC KSCRLRWLNYL+P+IKRG  
Sbjct: 7   GLRKGAWTAEEDSLLRQCIGKYGEGKWHQVPLRAGLNRCRKSCRLRWLNYLKPSIKRGKF 66

Query: 91  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK 136
           S  E DL+LRLHKLLGNRWSLIAGRLPGRT N++KNYWN+HLSKK
Sbjct: 67  SSDEVDLLLRLHKLLGNRWSLIAGRLPGRTANDVKNYWNTHLSKK 111

[Close]

BLAST of CsaV3_3G043510 vs. Swiss-Prot
Match: sp|P10290|MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays OX=4577 GN=C1 PE=2 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.9e-42
Identity = 76/105 (72.38%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 31  GVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNI 90
           GV +GAWT++ED  LA  +  HG  +W+ +  KAGL RCGKSCRLRWLNYLRPNI+RGNI
Sbjct: 11  GVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNI 70

Query: 91  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK 136
           S  EEDLI+RLH+LLGNRWSLIAGRLPGRTDNEIKNYWNS L ++
Sbjct: 71  SYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRR 115

[Close]

BLAST of CsaV3_3G043510 vs. Swiss-Prot
Match: sp|O49608|MYB32_ARATH (Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=2 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 2.9e-41
Identity = 88/162 (54.32%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISD 92
           NKGAWT EED KL   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN + 
Sbjct: 13  NKGAWTKEEDDKLISYIKAHGEGCWRSLPRSAGLQRCGKSCRLRWINYLRPDLKRGNFTL 72

Query: 93  QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSEKERRKGCKRKV 152
           +E+DLI++LH LLGN+WSLIA RLPGRTDNEIKNYWN+H+ +K+        RKG     
Sbjct: 73  EEDDLIIKLHSLLGNKWSLIATRLPGRTDNEIKNYWNTHVKRKL-------LRKGIDPAT 132

Query: 153 NTESREEETSQERENSSNLEYDVDNLFDFSNEGPDLEWMSNF 195
           +    E +TSQ+  +SS  E   D L    + GP LE ++NF
Sbjct: 133 HRPINETKTSQDSSDSSKTE---DPLVKILSFGPQLEKIANF 164

[Close]

BLAST of CsaV3_3G043510 vs. Swiss-Prot
Match: sp|Q96276|MYB23_ARATH (Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1)

HSP 1 Score: 166.4 bits (420), Expect = 3.2e-40
Identity = 72/103 (69.90%), Postives = 83/103 (80.58%), Query Frame = 0


Query: 34  KGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQ 93
           KG WT EED+ L   +  HG   W  IA K GL RCGKSCRLRW+NYL PN+ RGN +DQ
Sbjct: 14  KGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQ 73

Query: 94  EEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKM 137
           EEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLSKK+
Sbjct: 74  EEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 116

[Close]

BLAST of CsaV3_3G043510 vs. Swiss-Prot
Match: sp|Q9S9K9|MYB3_ARATH (Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 7.1e-40
Identity = 70/105 (66.67%), Postives = 88/105 (83.81%), Query Frame = 0


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 91
           +NKGAWT EEDQ L   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN +
Sbjct: 12  MNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFT 71

Query: 92  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKM 137
           ++E++LI++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +K+
Sbjct: 72  EEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CsaV3_3G043510 vs. Swiss-Prot
Match: sp|Q38851|MYB6_ARATH (Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.3e-40
Identity = 70/104 (67.31%), Postives = 86/104 (82.69%), Query Frame = 0


Query: 33  NKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISD 92
           NKGAWT EEDQ+L   I  HG   W+S+   AGL RCGKSCRLRW+NYLRP++KRGN +D
Sbjct: 13  NKGAWTKEEDQRLVDYIRNHGEGCWRSLPKSAGLLRCGKSCRLRWINYLRPDLKRGNFTD 72

Query: 93  QEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKM 137
            E+ +I++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +K+
Sbjct: 73  DEDQIIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

[Close]

BLAST of CsaV3_3G043510 vs. TrEMBL
Match: tr|A0A1S3CKJ6|A0A1S3CKJ6_CUCME (transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103501991 PE=4 SV=1)

HSP 1 Score: 384.8 bits (987), Expect = 1.2e-103
Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI
Sbjct: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60

Query: 61  AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 120
           AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT
Sbjct: 61  AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 120

Query: 121 DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 180
           DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD
Sbjct: 121 DNEIKNYWNSHLSKKMNQQSEKERRKGCKRKVNTESREEETSQERENSSNLEYDVDNLFD 180

Query: 181 FSNEGPDLEWMSNFL 196
           FSNEGPDLEWMSNFL
Sbjct: 181 FSNEGPDLEWMSNFL 195

[Close]

BLAST of CsaV3_3G043510 vs. TrEMBL
Match: tr|A0A1R3HJR6|A0A1R3HJR6_COCAP (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18744 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.9e-63
Identity = 133/180 (73.89%), Postives = 149/180 (82.78%), Query Frame = 0


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 91
           +NKGAWTAEED+KLA+VIA+HG KRWKS+A KAGLNRCGKSCRLRW+NYLRPNIKRGNIS
Sbjct: 15  INKGAWTAEEDRKLAEVIAVHGPKRWKSVAIKAGLNRCGKSCRLRWMNYLRPNIKRGNIS 74

Query: 92  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQ---QSE---KERR 151
           DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ   QSE   KE  
Sbjct: 75  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQKQKQSETSIKESC 134

Query: 152 KGCKRKVN------TESREEET---SQERENSSNLEYDVDNLFDFSNEGP-DLEWMSNFL 196
           K  KR+VN       E +E++T   S E E+S+N+ +DVD  FDFSNE P +LEWMS FL
Sbjct: 135 KAQKREVNESIIAREEVKEDKTSVRSSEEEDSNNISFDVDQFFDFSNEDPLNLEWMSRFL 194

[Close]

BLAST of CsaV3_3G043510 vs. TrEMBL
Match: tr|A0A061GJK0|A0A061GJK0_THECC (Myb domain protein 23 OS=Theobroma cacao OX=3641 GN=TCM_029126 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 6.4e-62
Identity = 129/172 (75.00%), Postives = 143/172 (83.14%), Query Frame = 0


Query: 32  VNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 91
           VNKGAWTAEED+KLA+VIA+HGAKRWK IA KAGLNRCGKSCRLRW+NYLRPNIKRGNIS
Sbjct: 21  VNKGAWTAEEDRKLAEVIAVHGAKRWKIIAIKAGLNRCGKSCRLRWMNYLRPNIKRGNIS 80

Query: 92  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQ---QSEKERRKGC 151
           DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ   QS    R+GC
Sbjct: 81  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQKEKQSGATTREGC 140

Query: 152 K--RKVNTESRE--EETSQERENSSNLEYDVDNLFDFSNEGP-DLEWMSNFL 196
           K  ++V   ++E  EE +      SN+ +DVD  FDFSNE P +LEWMS FL
Sbjct: 141 KAQKRVVENAKEVIEENTSRGGEDSNISFDVDEFFDFSNEDPLNLEWMSRFL 192

[Close]

BLAST of CsaV3_3G043510 vs. TrEMBL
Match: tr|A0A1Q3CRE7|A0A1Q3CRE7_CEPFO (Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_26152 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.4e-61
Identity = 135/204 (66.18%), Postives = 156/204 (76.47%), Query Frame = 0


Query: 1   MTEEEEESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSI 60
           M   ++ES+K KVK +      E+ +     VNKGAWT EED+KLA+ I IHG KRWK+I
Sbjct: 1   MAPIKDESIKTKVKPI------ESYMTTKIEVNKGAWTIEEDRKLAEFIEIHGPKRWKTI 60

Query: 61  AAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 120
           AAKAGLNRCGKSCRLRW+NYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT
Sbjct: 61  AAKAGLNRCGKSCRLRWMNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRT 120

Query: 121 DNEIKNYWNSHLSKKMNQQSEKER----RKGCK----RKVNTESREEETSQERENSSNLE 180
           DNEIKNYWNSHLSKK+NQ+ EK+R    RKG K    R +      EE ++E    S + 
Sbjct: 121 DNEIKNYWNSHLSKKINQK-EKQREVLTRKGSKTQKRRLIEKVELREENNKEDSEDSKIS 180

Query: 181 YDVDNLFDFSNEGP-DLEWMSNFL 196
           ++VD+ FDFSNE P +LEWMSNFL
Sbjct: 181 FNVDDFFDFSNENPFNLEWMSNFL 197

[Close]

BLAST of CsaV3_3G043510 vs. TrEMBL
Match: tr|A0A2C9UYT2|A0A2C9UYT2_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G020400 PE=4 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 7.1e-61
Identity = 138/206 (66.99%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 6   EESLKRKVKQVVEGDINEAEILRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAG 65
           +ES+KR+ K V         I     VNKGAWT EED+KLAQVIAIHGAKRWK IAA AG
Sbjct: 7   DESVKREDKPVE----TMTNIPTKKEVNKGAWTPEEDRKLAQVIAIHGAKRWKIIAATAG 66

Query: 66  LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIK 125
           LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIK
Sbjct: 67  LNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIK 126

Query: 126 NYWNSHLSKKMNQQSEKERRKGCKRKVNT-------------ESREEETS--QERENSSN 185
           NYWNSHLSKK+NQ   KE++ G   +  +             E REE  S    RE  SN
Sbjct: 127 NYWNSHLSKKINQ---KEKQSGASTREESMDGKMTAGKVDIVEVREENMSCNNTREEDSN 186

Query: 186 LEYDVDNLFDFSNEGP-DLEWMSNFL 196
             ++VD+ FDFSNE P DLEWM+NFL
Sbjct: 187 ATFNVDDFFDFSNEDPLDLEWMNNFL 205

The following BLAST results are available for this feature:

BLAST of CsaV3_3G043510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008464000.1	1.7e-103	100.00	PREDICTED: transcription factor MYB114-like [Cucumis melo] >XP_004151013.2 PREDI...	[more]
XP_011652333.1	5.8e-99	87.44	PREDICTED: transcription factor WER-like isoform X1 [Cucumis sativus]	[more]
XP_022980725.1	1.1e-89	90.26	transcription factor MYB114-like [Cucurbita maxima]	[more]
XP_023526052.1	1.1e-89	90.26	transcription factor MYB114-like [Cucurbita pepo subsp. pepo]	[more]
XP_022955558.1	1.9e-89	90.26	transcription factor MYB114-like [Cucurbita moschata]	[more]

BLAST of CsaV3_3G043510 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G34990.1	1.6e-42	54.32	myb domain protein 32	[more]
AT5G40330.1	1.8e-41	69.90	myb domain protein 23	[more]
AT1G22640.1	4.0e-41	66.67	myb domain protein 3	[more]
AT4G09460.1	5.2e-41	67.31	myb domain protein 6	[more]
AT1G66380.1	6.7e-41	70.48	myb domain protein 114	[more]

BLAST of CsaV3_3G043510 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P10290\|MYBC_MAIZE	9.9e-42	72.38	Anthocyanin regulatory C1 protein OS=Zea mays OX=4577 GN=C1 PE=2 SV=1	[more]
sp\|O49608\|MYB32_ARATH	2.9e-41	54.32	Transcription factor MYB32 OS=Arabidopsis thaliana OX=3702 GN=MYB32 PE=2 SV=1	[more]
sp\|Q96276\|MYB23_ARATH	3.2e-40	69.90	Transcription factor MYB23 OS=Arabidopsis thaliana OX=3702 GN=MYB23 PE=1 SV=1	[more]
sp\|Q9S9K9\|MYB3_ARATH	7.1e-40	66.67	Transcription factor MYB3 OS=Arabidopsis thaliana OX=3702 GN=MYB3 PE=1 SV=1	[more]
sp\|Q38851\|MYB6_ARATH	9.3e-40	67.31	Transcription repressor MYB6 OS=Arabidopsis thaliana OX=3702 GN=MYB6 PE=1 SV=1	[more]

BLAST of CsaV3_3G043510 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CKJ6\|A0A1S3CKJ6_CUCME	1.2e-103	100.00	transcription factor MYB114-like OS=Cucumis melo OX=3656 GN=LOC103501991 PE=4 SV...	[more]
tr\|A0A1R3HJR6\|A0A1R3HJR6_COCAP	9.9e-63	73.89	Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_18744 PE=4 ...	[more]
tr\|A0A061GJK0\|A0A061GJK0_THECC	6.4e-62	75.00	Myb domain protein 23 OS=Theobroma cacao OX=3641 GN=TCM_029126 PE=4 SV=1	[more]
tr\|A0A1Q3CRE7\|A0A1Q3CRE7_CEPFO	2.4e-61	66.18	Myb_DNA-binding domain-containing protein OS=Cephalotus follicularis OX=3775 GN=...	[more]
tr\|A0A2C9UYT2\|A0A2C9UYT2_MANES	7.1e-61	66.99	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_11G020400 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom
IPR001005	SANT/Myb

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_3G043510.1	CsaV3_3G043510.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 86..134 e-value: 1.9E-15 score: 67.3 coord: 33..83 e-value: 5.0E-17 score: 72.6
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 87..132 e-value: 1.7E-14 score: 53.6 coord: 34..81 e-value: 2.1E-19 score: 69.3
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 91..132 e-value: 2.59087E-9 score: 49.4962
IPR001005	SANT/Myb domain	CDD	cd00167	SANT	coord: 36..81 e-value: 2.59787E-11 score: 54.889
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 90..173 e-value: 1.6E-19 score: 71.7
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 32..87 e-value: 2.1E-20 score: 74.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 131..171
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 31..179
None	No IPR available	PANTHER	PTHR10641:SF558	SUBFAMILY NOT NAMED	coord: 31..179
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 86..136 score: 20.433
IPR017930	Myb domain	PROSITE	PS51294	HTH_MYB	coord: 29..85 score: 25.921
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	SSF46689	Homeodomain-like	coord: 32..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_3G043510	CSPI03G41040	Wild cucumber (PI 183967)	cpicucB145
CsaV3_3G043510	Cucsa.340790	Cucumber (Gy14) v1	cgycucB523
CsaV3_3G043510	CmaCh01G000400	Cucurbita maxima (Rimu)	cmacucB0538
CsaV3_3G043510	CmaCh14G012380	Cucurbita maxima (Rimu)	cmacucB0283
CsaV3_3G043510	CmoCh14G012670	Cucurbita moschata (Rifu)	cmocucB0274
CsaV3_3G043510	CmoCh01G000450	Cucurbita moschata (Rifu)	cmocucB0523
CsaV3_3G043510	Cp4.1LG02g17570	Cucurbita pepo (Zucchini)	cpecucB0695
CsaV3_3G043510	CsGy3G038540	Cucumber (Gy14) v2	cgybcucB117
CsaV3_3G043510	Carg06414	Silver-seed gourd	carcucB0134
CsaV3_3G043510	Cla012581	Watermelon (97103) v1	cucwmB224
CsaV3_3G043510	ClCG07G014040	Watermelon (Charleston Gray)	cucwcgB262
CsaV3_3G043510	Lsi07G006140	Bottle gourd (USVL1VR-Ls)	cuclsiB254
CsaV3_3G043510	MELO3C030841.2	Melon (DHL92) v3.6.1	cucmedB219
CsaV3_3G043510	Cla97C07G140810	Watermelon (97103) v2	cucwmbB242
CsaV3_3G043510	Bhi01G002182	Wax gourd	cucwgoB303

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None