Cucsa.307130 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.307130
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLow temperature-induced protein
Locationscaffold02977 : 403355 .. 405404 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CCTAAGAGAATGGGTTCAGCCACATTCATCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGGTATTCCTTCCCTTCCTTTTCCCTTTTTTCCTTCAATTCCCTTCGAATTTATGTATCTTCAGTACTATCCCTTTCCTAACTAACATTGTAATCTTTTATTATTATTATTAAAAATTAAGTTTATTTCCTTCTTTTAGGATTTTTATTGAGTTTTTAGTTTTCAATTTTTTTCTTGATTTTTTAAACCATTTGTAGAATATAGAAGTGTATGTAGATTTAATTTTATAAAATAATATGGTCATAAAATGTGATTGAATTTTTTTGTTTTTGTTTCTTCAAAATTCTTTATTTGATATCTATTTTGAAAATAAGTCGACTAAAAAAAaCGAAATGGTAACTAACGGAATTTAGAATATTAAAATATTAAATGGTAATTGTTGCTTAATTTTCTAACTTTTAAAAATTAGAAAAATGTAAAAGTTAAAACCCTAAATTTCCTTTTATTTTTTCGTTTTTGAAAATTGTTCATCTCAATATTTCTTTGGTTGAAACAATTTTAAATTGTAATCCAGAAAACTAAAACAAGTTCTAAAGTAAAACATTATGATTTTGTGAAAAAACTCCCAAAAAAAGGAGTTTTTATGAATAACAAAGACAAGAAAACTCCCAGTGGGAGATGTTTAAATTTTCAAATATAATAGTCATTGTACTGAAAAAAACAAGAAAATAAAAATTTGTAAACTTACTTAAAATAATTAATCAATTATCAAATAATATAGTTTGAATTACATTTTTAGATTTATATTCATTAATTATTCGACACTTTTACTTTTTAACTGCTTATTCTTCTCTCTTTTTTGGTATAACTTCGTTATACTTCAGATTTTGTTCATGTAAGTGTTTATGCTTTTAAGTTCTAAAATCTTTATCCTCATGACCTCAAATTATATTTCTTGAAATTTTCTATAAATAAAGATAAATATAAAGCTGACCATAAAAAAATTGTAGGGTAGACTATCAAATGCAGCACTCAAATATATGCCTTTCATTTTGATTTTGATTTTTTCTTTTCCTTTTGGTAATTCTTTTAAAAGAAAAAAaTTTGATTGTCTTGTAAATTCATCTATACCATCAAATAAATTTTGAAAATTTTTAGAACACTTCTAGTCAACTTACAACAAAACATAGAACCAACACAGGAGAGTGGTGTTTATAAACCATTTTTCTTGATTTTTTTAACTGTGCATGCATTTGAACTATATCACCCAATTTAAAATAAAACCTGACTCTAATTTAGGAAAACACTCATAAAATACCAAGACAAATGCAAATGCAAGTTCCATAGAGTTGGTATTCAAAAATTAAAAGACAAATGGTTTAAATTCAATCACTTGGCTTAGATTTTGAAAATAGCATTGGCAAGCTTAGATTTATTTTTAATTTTAATATTTTTTTTGTTATTTTTGAAAATATTAATAACAACAATGTTTGGTTATATTATTGGGTATTAAAAATTGCAGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTATTTACGCCGTTTACGTCTTGATTGGAACGCGATGACTGACCCTTATGGCCTTACCGTACCGCCGTGGCGTTTCTTGGTGGAATCCACCTTTTTAGGACTATACCCCTTTTCTTAGTTGTGAGATTTAGACTACAAAATGCTTCTCTTCTTTCTTCTTCTTCTTCTTTAGCTTTGGAAGGTAAAAATAAAAAGATTAAGGATGAGATTAGGGTGGGTTTGGTAGGGATTTTGGCATAGCTAAAATCATTTTTTTTtCACAAAAATATGGTATTTTGCAACCTAAATAAAGTGATTTCAGAAAAATAAGAAACTACTCGATTTCTTAAGCATCACTTCTGGAAATTACCACCTTATTTCATATAGTTTTTtAAATACCCAAAATACCCTTCTTTTTTAGTAATTTGACAGTTTCAAAATCATTTTTAGTATAAACAATCCTGATCGA

mRNA sequence

CCTAAGAGAATGGGTTCAGCCACATTCATCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTATTTACGCCGTTTACGTCTTGATTGGAACGCGATGACTGACCCTTATGGCCTTACCGTACCGCCGTGGCGTTTCTTGGTGGAATCCACCTTTTTAGGACTATACCCCTTTTCTTAGTTGTGAGATTTAGACTACAAAATGCTTCTCTTCTTTCTTCTTCTTCTTCTTTAGCTTTGGAAGGTAAAAATAAAAAGATTAAGGATGAGATTagggtgggtttggtagggattttggcatagctaaaatcatttttTTTTCACAAAAATATGGTATTTTGCAACCTAAATAAAGTGATTTCAGAAAAATAAGAAACTACTCGATTTCTTAAGCATCACTTCTGGAAATTACCACCTTATTTCATATAGTTTTTTAAATACCCAAAATACCCTTCTTTTTTAGTAATTTGACAGTTTCAAAATCATTTTTAGTATAAACAATCCTGATCGA

Coding sequence (CDS)

ATGGGTTCAGCCACATTCATCGAAGTCCTTCTCGCCATCTTCATTCCACCCGTCGGCGTTTTTCTCCGCTATGGCATTGGGATCGAATTTTGGATTGACTTGGTGCTCACATTTTTCGGATACATTCCCGGAATTATTTACGCCGTTTACGTCTTGATTGGAACGCGATGA

Protein sequence

MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR*
Homology
[Close]
BLAST of Cucsa.307130 vs. Swiss-Prot
Match: LT02_HORVU (Low temperature-induced protein lt101.2 OS=Hordeum vulgare GN=LT101.2 PE=2 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.3e-18
Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          M SATFIEV+LAI +PPVGVFLRYG+ +EFWI L+LT  GYIPGIIYAVYVL+
Sbjct: 1  MASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. Swiss-Prot
Match: LT01_HORVU (Low temperature-induced protein lt101.1 OS=Hordeum vulgare GN=LT101.1 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-17
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GYIPGIIYAVYVL+
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. Swiss-Prot
Match: ESI3_ELYEL (Salt stress-induced hydrophobic peptide ESI3 OS=Elymus elongatus GN=ESI3 PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 3.2e-17
Identity = 40/53 (75.47%), Postives = 47/53 (88.68%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          MGSAT +EV+LAI +PPVGVFLRY +G+EFWI L+LT  GYIPGIIYAVYVL+
Sbjct: 1  MGSATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. Swiss-Prot
Match: RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1)

HSP 1 Score: 84.3 bits (207), Expect = 4.6e-16
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVL 53
          M +ATF+++++AI +PP+GVFLR+G G+EFWI LVLT  GYIPGIIYA+YVL
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]
BLAST of Cucsa.307130 vs. Swiss-Prot
Match: RC21_ARATH (UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana GN=At1g57550 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 1.3e-15
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVL 53
          MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F +IPG+IYA+YVL
Sbjct: 1  MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

[Close]
BLAST of Cucsa.307130 vs. TrEMBL
Match: A0A0A0LAU7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736860 PE=4 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 2.1e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR 57
          MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR
Sbjct: 14 MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR 69

[Close]
BLAST of Cucsa.307130 vs. TrEMBL
Match: M0THT6_MUSAM (Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-18
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIG 55
          MGSATF+EV+LAI +PPVGVFLRYGIG+EFWIDL+LT  GYIPGIIYA+YVL+G
Sbjct: 1  MGSATFLEVILAILLPPVGVFLRYGIGVEFWIDLLLTILGYIPGIIYALYVLVG 54

[Close]
BLAST of Cucsa.307130 vs. TrEMBL
Match: A0A0E0GKY9_ORYNI (Uncharacterized protein OS=Oryza nivara PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.6e-18
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          M SATF+EVLLAIF+PPVGVFLRYG+GIEFWIDL+LT  GYIPGIIYAVYVL+
Sbjct: 1  MASATFLEVLLAIFLPPVGVFLRYGLGIEFWIDLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. TrEMBL
Match: A0A0E0CZ29_9ORYZ (Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.6e-18
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          M SATF+EVLLAIF+PPVGVFLRYG+GIEFWIDL+LT  GYIPGIIYAVYVL+
Sbjct: 1  MASATFLEVLLAIFLPPVGVFLRYGLGIEFWIDLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. TrEMBL
Match: A0A0D9Z5P6_9ORYZ (Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 2.6e-18
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          M SATF+EVLLAIF+PPVGVFLRYG+GIEFWIDL+LT  GYIPGIIYAVYVL+
Sbjct: 1  MASATFLEVLLAIFLPPVGVFLRYGLGIEFWIDLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. TAIR10
Match: AT2G38905.1 (AT2G38905.1 Low temperature and salt responsive protein family)

HSP 1 Score: 92.4 bits (228), Expect = 9.5e-20
Identity = 40/54 (74.07%), Postives = 48/54 (88.89%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIG 55
          MGS TF+E++LAI +PPVGVFLRYG G+EFWI L+LT  GYIPGIIYA+YVL+G
Sbjct: 1  MGSETFLEIILAILLPPVGVFLRYGCGVEFWICLLLTILGYIPGIIYAIYVLVG 54

[Close]
BLAST of Cucsa.307130 vs. TAIR10
Match: AT3G05880.1 (AT3G05880.1 Low temperature and salt responsive protein family)

HSP 1 Score: 84.3 bits (207), Expect = 2.6e-17
Identity = 35/52 (67.31%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVL 53
          M +ATF+++++AI +PP+GVFLR+G G+EFWI LVLT  GYIPGIIYA+YVL
Sbjct: 1  MSTATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVL 52

[Close]
BLAST of Cucsa.307130 vs. TAIR10
Match: AT1G57550.1 (AT1G57550.1 Low temperature and salt responsive protein family)

HSP 1 Score: 82.8 bits (203), Expect = 7.5e-17
Identity = 38/52 (73.08%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVL 53
          MGS  F+EVL AIFIPPVGVFLRYG+G+EFW+ L+LT F +IPG+IYA+YVL
Sbjct: 1  MGS--FLEVLCAIFIPPVGVFLRYGLGLEFWVCLLLTLFAFIPGLIYAIYVL 50

[Close]
BLAST of Cucsa.307130 vs. TAIR10
Match: AT3G05890.1 (AT3G05890.1 Low temperature and salt responsive protein family)

HSP 1 Score: 80.5 bits (197), Expect = 3.7e-16
Identity = 31/52 (59.62%), Postives = 46/52 (88.46%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVL 53
          M +ATF+E++LAI +PP+GVFL++G  +EFWI L+LT FGY+PGI+YA+Y++
Sbjct: 1  MSTATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYII 52

[Close]
BLAST of Cucsa.307130 vs. TAIR10
Match: AT4G30650.1 (AT4G30650.1 Low temperature and salt responsive protein family)

HSP 1 Score: 59.7 bits (143), Expect = 6.8e-10
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 1 

Query: 6  FIEVLLAIFIPPVGVFLRYGI-GIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          F E+L+AI +PP+GV L+ G   +EF I LVLT  GYIPGIIYA+YV++
Sbjct: 8  FCEILIAILLPPLGVCLKRGCCTVEFLICLVLTILGYIPGIIYALYVIV 56

[Close]
BLAST of Cucsa.307130 vs. NCBI nr
Match: gi|449440069|ref|XP_004137807.1| (PREDICTED: low temperature-induced protein lt101.2-like [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 3.0e-23
Identity = 56/56 (100.00%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR 57
          MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR
Sbjct: 14 MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR 69

[Close]
BLAST of Cucsa.307130 vs. NCBI nr
Match: gi|659083994|ref|XP_008442650.1| (PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo])

HSP 1 Score: 114.8 bits (286), Expect = 5.0e-23
Identity = 54/56 (96.43%), Postives = 56/56 (100.00%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIGTR 57
          MGSATF+EVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGI+YAVYVLIGTR
Sbjct: 14 MGSATFVEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIVYAVYVLIGTR 69

[Close]
BLAST of Cucsa.307130 vs. NCBI nr
Match: gi|695043695|ref|XP_009409551.1| (PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-18
Identity = 44/54 (81.48%), Postives = 51/54 (94.44%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIG 55
          MGSATF+EV+LAI +PPVGVFLRYGIG+EFWIDL+LT  GYIPGIIYA+YVL+G
Sbjct: 1  MGSATFLEVILAILLPPVGVFLRYGIGVEFWIDLLLTILGYIPGIIYALYVLVG 54

[Close]
BLAST of Cucsa.307130 vs. NCBI nr
Match: gi|1002257790|ref|XP_015633211.1| (PREDICTED: low temperature-induced protein lt101.2 [Oryza sativa Japonica Group])

HSP 1 Score: 98.6 bits (244), Expect = 3.7e-18
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLI 54
          M SATF+EVLLAIF+PPVGVFLRYG+GIEFWIDL+LT  GYIPGIIYAVYVL+
Sbjct: 1  MASATFLEVLLAIFLPPVGVFLRYGLGIEFWIDLLLTILGYIPGIIYAVYVLV 53

[Close]
BLAST of Cucsa.307130 vs. NCBI nr
Match: gi|356511851|ref|XP_003524635.1| (PREDICTED: salt stress-induced hydrophobic peptide ESI3-like [Glycine max])

HSP 1 Score: 97.4 bits (241), Expect = 8.3e-18
Identity = 43/54 (79.63%), Postives = 49/54 (90.74%), Query Frame = 1 

Query: 1  MGSATFIEVLLAIFIPPVGVFLRYGIGIEFWIDLVLTFFGYIPGIIYAVYVLIG 55
          MGS TF+EV+LAI +PPVGVFLRYG G+EFWIDLVLT  GYIPGIIYA+YVL+G
Sbjct: 1  MGSETFLEVILAILLPPVGVFLRYGCGVEFWIDLVLTILGYIPGIIYAIYVLVG 54

The following BLAST results are available for this feature:
BLAST of Cucsa.307130 vs. Swiss-Prot
Match NameE-valueIdentityDescription
LT02_HORVU8.3e-1877.36Low temperature-induced protein lt101.2 OS=Hordeum vulgare GN=LT101.2 PE=2 SV=1[more]
LT01_HORVU3.2e-1775.47Low temperature-induced protein lt101.1 OS=Hordeum vulgare GN=LT101.1 PE=2 SV=1[more]
ESI3_ELYEL3.2e-1775.47Salt stress-induced hydrophobic peptide ESI3 OS=Elymus elongatus GN=ESI3 PE=2 SV... [more]
RCI2A_ARATH4.6e-1667.31Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1[more]
RC21_ARATH1.3e-1573.08UPF0057 membrane protein At1g57550 OS=Arabidopsis thaliana GN=At1g57550 PE=3 SV=... [more]
BLAST of Cucsa.307130 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LAU7_CUCSA2.1e-23100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G736860 PE=4 SV=1[more]
M0THT6_MUSAM1.5e-1881.48Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1[more]
A0A0E0GKY9_ORYNI2.6e-1884.91Uncharacterized protein OS=Oryza nivara PE=4 SV=1[more]
A0A0E0CZ29_9ORYZ2.6e-1884.91Uncharacterized protein OS=Oryza meridionalis PE=4 SV=1[more]
A0A0D9Z5P6_9ORYZ2.6e-1884.91Uncharacterized protein OS=Oryza glumipatula PE=4 SV=1[more]
BLAST of Cucsa.307130 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G38905.19.5e-2074.07 Low temperature and salt responsive protein family[more]
AT3G05880.12.6e-1767.31 Low temperature and salt responsive protein family[more]
AT1G57550.17.5e-1773.08 Low temperature and salt responsive protein family[more]
AT3G05890.13.7e-1659.62 Low temperature and salt responsive protein family[more]
AT4G30650.16.8e-1059.18 Low temperature and salt responsive protein family[more]
BLAST of Cucsa.307130 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449440069|ref|XP_004137807.1|3.0e-23100.00PREDICTED: low temperature-induced protein lt101.2-like [Cucumis sativus][more]
gi|659083994|ref|XP_008442650.1|5.0e-2396.43PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo][more]
gi|695043695|ref|XP_009409551.1|2.2e-1881.48PREDICTED: salt stress-induced hydrophobic peptide ESI3 [Musa acuminata subsp. m... [more]
gi|1002257790|ref|XP_015633211.1|3.7e-1884.91PREDICTED: low temperature-induced protein lt101.2 [Oryza sativa Japonica Group][more]
gi|356511851|ref|XP_003524635.1|8.3e-1879.63PREDICTED: salt stress-induced hydrophobic peptide ESI3-like [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000612PMP3
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0031410 cytoplasmic vesicle
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.307130.1Cucsa.307130.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000612Proteolipid membrane potential modulatorPANTHERPTHR21659HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATEDcoord: 1..53
score: 7.4
IPR000612Proteolipid membrane potential modulatorPFAMPF01679Pmp3coord: 6..52
score: 8.2
IPR000612Proteolipid membrane potential modulatorPROSITEPS01309UPF0057coord: 10..25
scor
NoneNo IPR availablePANTHERPTHR21659:SF25SUBFAMILY NOT NAMEDcoord: 1..53
score: 7.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.307130Csa5G175890Cucumber (Chinese Long) v2cgycuB438
Cucsa.307130Csa3G736860Cucumber (Chinese Long) v2cgycuB436
Cucsa.307130ClCG02G013890Watermelon (Charleston Gray)cgywcgB527
Cucsa.307130CmaCh04G002680Cucurbita maxima (Rimu)cgycmaB0845
Cucsa.307130CmaCh06G003570Cucurbita maxima (Rimu)cgycmaB0846
Cucsa.307130CmoCh04G002740Cucurbita moschata (Rifu)cgycmoB0843
Cucsa.307130CmoCh06G003510Cucurbita moschata (Rifu)cgycmoB0844
Cucsa.307130Cp4.1LG08g11180Cucurbita pepo (Zucchini)cgycpeB0802
Cucsa.307130CsaV3_3G035580Cucumber (Chinese Long) v3cgycucB472
Cucsa.307130CsaV3_5G006260Cucumber (Chinese Long) v3cgycucB474
Cucsa.307130Cla97C02G039530Watermelon (97103) v2cgywmbB531
Cucsa.307130Carg01002Silver-seed gourdcarcgyB0196
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cucsa.307130Cucsa.166000Cucumber (Gy14) v1cgycgyB106
The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.307130Silver-seed gourdcarcgyB0400
Cucsa.307130Silver-seed gourdcarcgyB0627
Cucsa.307130Cucumber (Chinese Long) v3cgycucB473
Cucsa.307130Watermelon (97103) v2cgywmbB529
Cucsa.307130Watermelon (97103) v2cgywmbB530
Cucsa.307130Watermelon (97103) v2cgywmbB532
Cucsa.307130Wax gourdcgywgoB613
Cucsa.307130Wax gourdcgywgoB610
Cucsa.307130Wax gourdcgywgoB612
Cucsa.307130Wax gourdcgywgoB615
Cucsa.307130Cucumber (Gy14) v1cgycgyB018
Cucsa.307130Cucurbita maxima (Rimu)cgycmaB0841
Cucsa.307130Cucurbita maxima (Rimu)cgycmaB0842
Cucsa.307130Cucurbita maxima (Rimu)cgycmaB0843
Cucsa.307130Cucurbita maxima (Rimu)cgycmaB0844
Cucsa.307130Cucurbita maxima (Rimu)cgycmaB0847
Cucsa.307130Cucurbita moschata (Rifu)cgycmoB0837
Cucsa.307130Cucurbita moschata (Rifu)cgycmoB0839
Cucsa.307130Cucurbita moschata (Rifu)cgycmoB0841
Cucsa.307130Cucurbita moschata (Rifu)cgycmoB0845
Cucsa.307130Wild cucumber (PI 183967)cgycpiB459
Cucsa.307130Wild cucumber (PI 183967)cgycpiB460
Cucsa.307130Cucumber (Chinese Long) v2cgycuB437
Cucsa.307130Melon (DHL92) v3.5.1cgymeB503
Cucsa.307130Melon (DHL92) v3.5.1cgymeB504
Cucsa.307130Melon (DHL92) v3.5.1cgymeB505
Cucsa.307130Watermelon (Charleston Gray)cgywcgB525
Cucsa.307130Watermelon (Charleston Gray)cgywcgB526
Cucsa.307130Watermelon (Charleston Gray)cgywcgB528
Cucsa.307130Watermelon (97103) v1cgywmB553
Cucsa.307130Watermelon (97103) v1cgywmB554
Cucsa.307130Watermelon (97103) v1cgywmB555
Cucsa.307130Cucurbita pepo (Zucchini)cgycpeB0798
Cucsa.307130Cucurbita pepo (Zucchini)cgycpeB0799
Cucsa.307130Cucurbita pepo (Zucchini)cgycpeB0800
Cucsa.307130Cucurbita pepo (Zucchini)cgycpeB0801
Cucsa.307130Bottle gourd (USVL1VR-Ls)cgylsiB493
Cucsa.307130Bottle gourd (USVL1VR-Ls)cgylsiB494
Cucsa.307130Bottle gourd (USVL1VR-Ls)cgylsiB495
Cucsa.307130Melon (DHL92) v3.6.1cgymedB503
Cucsa.307130Melon (DHL92) v3.6.1cgymedB504
Cucsa.307130Melon (DHL92) v3.6.1cgymedB505