Cucsa.280300 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.280300
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionNADH dehydrogenase-like complex L
Locationscaffold02633 : 236451 .. 238265 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGATGAACATGAAGTGCTGCAGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACCCTTTTTCCTTCTCTCTATTCTCCCTTTAAGCTTCACAATTTCAATATTTTGCCTTCCAATTCAAATCCCAAGAATGTATATATATATCTCTCTAACTCTCTGTTTCTCTCTCTCTCCTCTCTCTCTCTCTAAACATTGTTTTTTTTTCCTAATGGGTGTAGTTTAAGATAGTGGGAAGTATCAAAGAAGAAGATCCCATTGGATATCTTCATAAAAAGAAAACAAGTTTAGCTCTTCATCTTGCTGCCTTTTTAGCCACTGTAAGCCAACTTTCTTCCACCATTTTTAAAAACCTCAATATGCTGAATTAACTAATTATTGTTGGATTATATAATTAATATATGTATATAGTTTTGGGGGCTAATACATGTTGTTTCAAATAACAGGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGAGAACAACCATGAAGTTCCTTTGACATGGGTTTTGGCACAATTAGGCGTTATTGGATTCTTTTACTTCCTTGTTTTTCCTGTAAGTATATTATTTAACTAACTTTCCCATATTCTTTCTCTAAATTACTTGTGAATTAATTAAGTTAATTTCAAAAGTGAACATTTTAAGTTTAATTTTTTAATTTATCATGTATTTATTATTGCAGCCAATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAATTTGTTGGAAATGTATCTCCAATTCATGTGTGTATTCCTCTTCTTCCCTGGGTAAGTAACTGTTAAGTTCATACATCTATAGGTTGTATTACAAACTTATTTGATACCGTTCAAATCATTTTTATCATATACCAGTTAAGCGTTCAGAAATTAGCCAAGTTGTCATGAATGTTTAAGATTAGGAAGAAAATTGAATGGTTGCCTGCAAGACAGAAAATTCTAACATTTGTGTGACTTTTTTAGCCATCAAATAGTTCTAGAGAACTAAAACAGTATATAAAGCTCATGAAAGAATGTAACGGACTCTCTCTGTTATATATATTGGGAAATATTGTTTCGTAATTGTTATCAGTTGCTAGTTATCTTCTTGGATCATTAATTATATCGTTATATTATCGTTACATGTCAAAGTTGTCAAGATAATCTTGTTTGCAAATCTAAGTACCACACAACTGATCCAAGAGAGAGATGAACACTCTTTACCACTGACCCTATCAGTCAGCTTCCACAAAGGTCGGTTCTTCGCGACATAAGGAAGTTTCAAGGGTTGGCCTAGCTAGTCCCTCTATGTCACAACGTCCTACAGGCGTGTAGAGCATTGTGGCCGACCTTATGGGCTGCCCCAAACTAGCTCCTAGGGTCAACCTCCATGAGATTTTGTGACTTTATTGTTAATCCTATCTCACTTTTATCTCATCCTTTTTCCAATAGTCAGTCTTTAGAGTGGCACTCAAAGTAGACATGTTATTTCTTAGACACCTCAACTCGAGTTTTCACTCCTAACATAGATTGATCTCCAACGATTAAAGACATATTTGTGACTATCAAAATCACTTCAAACCTGCTCATAAATTGAATGTTGACGTTTGTTTAATTTGCAGAATTCTATTGTGGGCACCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCGACACCCCAAGACCCATCTAAGATAAAAAAATGCGTACTTGAAATACCCATTTGCTAAGCCCGAAGATTATGATTGGTAACTGTGTCTGCAAAAATGCGTCTTCCAAAACTCAACCC

mRNA sequence

TGATGAACATGAAGTGCTGCAGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACCCTTTTTCCTTCTCTCTATTCTCCCTTTAAGCTTCACAATTTCAATATTTTGCCTTCCAATTCAAATCCCAAGAATTTTAAGATAGTGGGAAGTATCAAAGAAGAAGATCCCATTGGATATCTTCATAAAAAGAAAACAAGTTTAGCTCTTCATCTTGCTGCCTTTTTAGCCACTGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGAGAACAACCATGAAGTTCCTTTGACATGGGTTTTGGCACAATTAGGCGTTATTGGATTCTTTTACTTCCTTGTTTTTCCTCCAATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAATTTGTTGGAAATGTATCTCCAATTCATGTGTGTATTCCTCTTCTTCCCTGGAATTCTATTGTGGGCACCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCGACACCCCAAGACCCATCTAAGATAAAAAAATGCGTACTTGAAATACCCATTTGCTAAGCCCGAAGATTATGATTGGTAACTGTGTCTGCAAAAATGCGTCTTCCAAAACTCAACCC

Coding sequence (CDS)

ATGAACATGAAGTGCTGCAGCATTGGCCTTCTTCACATCCCCAAGGCCTTGCCTTCTCTCTCCTCTTCCAAAACCCTTTTTCCTTCTCTCTATTCTCCCTTTAAGCTTCACAATTTCAATATTTTGCCTTCCAATTCAAATCCCAAGAATTTTAAGATAGTGGGAAGTATCAAAGAAGAAGATCCCATTGGATATCTTCATAAAAAGAAAACAAGTTTAGCTCTTCATCTTGCTGCCTTTTTAGCCACTGTTGGGGAGCCAGCAAGTGCAGTAACAGGAGAGAACAACCATGAAGTTCCTTTGACATGGGTTTTGGCACAATTAGGCGTTATTGGATTCTTTTACTTCCTTGTTTTTCCTCCAATCATCATGAATTGGCTGAGGATAAGATGGTATAGAAGAAATTTGTTGGAAATGTATCTCCAATTCATGTGTGTATTCCTCTTCTTCCCTGGAATTCTATTGTGGGCACCATTTTTGAACTTCAGAAAGTTTCCACGAGATCCATCAATGAAGTATCCATGGTCGACACCCCAAGACCCATCTAAGATAAAAAAATGCGTACTTGAAATACCCATTTGCTAA

Protein sequence

MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIKKCVLEIPIC*
Homology
[Close]
BLAST of Cucsa.280300 vs. Swiss-Prot
Match: NDHL_ARATH (NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana GN=ndhL PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 4.7e-44
Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 1 

Query: 4   KCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIK-EEDP 63
           +C S+GL + P ALPSLS       S+ SPF       + S++ P +  +    K     
Sbjct: 3   RCGSLGL-YAPNALPSLSLKPR---SVKSPF------CITSHTKPNDTLLHNVNKMRAKA 62

Query: 64  IGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPI 123
              L  KKT LA  L A LAT+  PA A+TG NN +  L+ V+  +G+I  +YFLV PPI
Sbjct: 63  CDILGAKKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISVWYFLVMPPI 122

Query: 124 IMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 183
           IMNWLR+RWYRR   EMYLQFM VF+FFPG+LLWAPFLNFRKFPRDP+MK PW  P DP 
Sbjct: 123 IMNWLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKPTDPD 181

Query: 184 KIKKCVLEIP 193
            IK   L+ P
Sbjct: 183 SIKNVYLKYP 181

[Close]
BLAST of Cucsa.280300 vs. Swiss-Prot
Match: NDHL_THEEB (NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strain BP-1) GN=ndhL PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 9.2e-08
Identity = 28/64 (43.75%), Postives = 35/64 (54.69%), Query Frame = 1 

Query: 104 VLAQLGVIGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFR 163
           VL   G +   Y LV P I+  +L  RWY  +  E    +  V  FFPG+LL APF+NFR
Sbjct: 9   VLGVYGALAGLYLLVVPAIVYAYLNARWYVASSFERAFMYFLVTFFFPGLLLLAPFINFR 68

Query: 164 KFPR 168
             PR
Sbjct: 69  PQPR 72

[Close]
BLAST of Cucsa.280300 vs. Swiss-Prot
Match: NDHL_SYNPX (NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) GN=ndhL PE=3 SV=1)

HSP 1 Score: 58.2 bits (139), Expect = 1.2e-07
Identity = 26/60 (43.33%), Postives = 37/60 (61.67%), Query Frame = 1 

Query: 104 VLAQLGVIGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFR 163
           V+    ++G  Y LV P  +  W+  RW R   +E  L +  VFLFFPG++++APFLNFR
Sbjct: 17  VILAYALLGGLYLLVVPLALFFWMNSRWTRMGKIERLLVYGLVFLFFPGMVVFAPFLNFR 76

[Close]
BLAST of Cucsa.280300 vs. Swiss-Prot
Match: NDHL_PROMM (NAD(P)H-quinone oxidoreductase subunit L OS=Prochlorococcus marinus (strain MIT 9313) GN=ndhL PE=3 SV=2)

HSP 1 Score: 57.4 bits (137), Expect = 2.0e-07
Identity = 25/60 (41.67%), Postives = 37/60 (61.67%), Query Frame = 1 

Query: 104 VLAQLGVIGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFR 163
           VLA   ++G  Y +V P ++ +W+  RW+     E    +  VFLFFPG++L+APFLN R
Sbjct: 17  VLAAYALLGGLYLIVVPLLLYSWMNRRWHCMGKFERLSAYGLVFLFFPGLILFAPFLNLR 76

[Close]
BLAST of Cucsa.280300 vs. Swiss-Prot
Match: NDHL_TRIEI (NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS101) GN=ndhL PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.7e-07
Identity = 24/49 (48.98%), Postives = 34/49 (69.39%), Query Frame = 1 

Query: 115 YFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFR 164
           YFLV P I+  +L+ RWY  + +E    +  +FLFFPG+L+ +PFLNFR
Sbjct: 22  YFLVMPAIVYAYLKTRWYVVSSIERVFMYFLMFLFFPGMLVLSPFLNFR 70

[Close]
BLAST of Cucsa.280300 vs. TrEMBL
Match: A0A0A0KSV9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569340 PE=4 SV=1)

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-106
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 1 

Query: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60
           MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120
           DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSKIKKCVLEIP 193
           PSKIK   L+ P
Sbjct: 181 PSKIKNAYLKYP 192

[Close]
BLAST of Cucsa.280300 vs. TrEMBL
Match: W9S5X4_9ROSA (NAD(P)H-quinone oxidoreductase subunit L OS=Morus notabilis GN=L484_011974 PE=4 SV=1)

HSP 1 Score: 212.2 bits (539), Expect = 5.5e-52
Identity = 112/187 (59.89%), Postives = 130/187 (69.52%), Query Frame = 1 

Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGY 65
           CSI   HIPKALPSL   +   P   +    H      S +   N + + SI ++ P+ Y
Sbjct: 3   CSISF-HIPKALPSLGLPQRRNPLSVTSKHSH------SCTAKLNQETMASIIQK-PVEY 62

Query: 66  LHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMN 125
            H KK+SLA+ + A LA V +PA AVTG NN E  LTW L QLGV+ FFYFLV PPIIMN
Sbjct: 63  FHMKKSSLAVQIGAVLAIVEQPAFAVTGVNN-EQDLTWTLIQLGVVAFFYFLVMPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIK 185
           WLRIRWY+RNLLE Y QFM VF+FF G+LLWAPFLNFRKFPRDPSMKYPWS P+DPSKIK
Sbjct: 123 WLRIRWYKRNLLETYFQFMFVFIFFAGVLLWAPFLNFRKFPRDPSMKYPWSKPEDPSKIK 180

Query: 186 KCVLEIP 193
              L+ P
Sbjct: 183 NAYLKYP 180

[Close]
BLAST of Cucsa.280300 vs. TrEMBL
Match: A0A0F7CYX7_9ROSI (NADH dehydrogenase-like complex L OS=Francoa sonchifolia GN=NDHL PE=2 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 9.4e-52
Identity = 110/181 (60.77%), Postives = 128/181 (70.72%), Query Frame = 1 

Query: 12  HIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGYLHKKKT 71
           ++ KALPS  +S+   PSL    K H  +    N   K         ++ PI YL+ KK+
Sbjct: 4   YLIKALPSFCNSQCRIPSLSIKCKHHEHS---HNVRTKK-------NQQKPIDYLNLKKS 63

Query: 72  SLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMNWLRIRW 131
           SLA+ + A LATV EPA AVTGENN E  L WVL QLG++ F+YFL+ PPIIMNWLRIRW
Sbjct: 64  SLAVQIGAILATV-EPAMAVTGENNRE-DLVWVLIQLGIVAFWYFLIMPPIIMNWLRIRW 123

Query: 132 YRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIKKCVLEI 191
           YRR L EMYLQFM VF+FFPGILLWAPFLNFRKFPRDP MKYPWSTP DP+KIK   L+ 
Sbjct: 124 YRRKLGEMYLQFMFVFMFFPGILLWAPFLNFRKFPRDPDMKYPWSTPDDPTKIKNDYLKF 172

Query: 192 P 193
           P
Sbjct: 184 P 172

[Close]
BLAST of Cucsa.280300 vs. TrEMBL
Match: D7T8Q0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05290 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.7e-51
Identity = 108/187 (57.75%), Postives = 133/187 (71.12%), Query Frame = 1 

Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGY 65
           CS  +  IPKALP L  S+  FPSL         +I   + + K  K + SI ++  + Y
Sbjct: 3   CSFSI-QIPKALPCLFHSQCKFPSLSIS------SIQKQSHHAKPIKTITSIIKKS-VDY 62

Query: 66  LHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMN 125
           +   K SLA+ + A LATV +PA AVTG N  EV L WVL QLG++ F+YFL+ PPIIMN
Sbjct: 63  ISTNKHSLAIQVGALLATVEKPAFAVTGVNK-EVDLIWVLIQLGIVLFWYFLIMPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIK 185
           WLRIRWY RNLLEMYLQFM VF+FFPG++LWAPFLNFRKFPRDPSMKYPWSTPQ+P+++K
Sbjct: 123 WLRIRWYERNLLEMYLQFMFVFMFFPGVMLWAPFLNFRKFPRDPSMKYPWSTPQNPTQVK 180

Query: 186 KCVLEIP 193
              L+ P
Sbjct: 183 NAFLKYP 180

[Close]
BLAST of Cucsa.280300 vs. TrEMBL
Match: A0A0D2NDM9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_005G159500 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 5.2e-50
Identity = 112/192 (58.33%), Postives = 127/192 (66.15%), Query Frame = 1 

Query: 6   CSIGLLHIPKALPSL----SSSKTLFPSL-YSPFKLHNFNILPSNSNPKNFKIVGSIKEE 65
           CS     IPKALPS+    S   T FP    S  K  N+  L    N  N  +       
Sbjct: 2   CSCLSFQIPKALPSIYVSPSQCSTKFPFFNLSQHKPTNYPKLYKKPNVTNINL------- 61

Query: 66  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 125
            P  YL  KKTSLA+ +AA L+T   PA AVTG NN E  L  V+ QLG+I F YFL+ P
Sbjct: 62  KPNNYLDAKKTSLAVPIAALLSTFELPALAVTGVNN-EPDLITVIIQLGIIAFGYFLIVP 121

Query: 126 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 185
           PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPG+LLWAPFLNFRKFPRD S+KYPW TP+D
Sbjct: 122 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGLLLWAPFLNFRKFPRDKSLKYPWDTPKD 181

Query: 186 PSKIKKCVLEIP 193
           PS++K   L+ P
Sbjct: 182 PSQVKNAYLKYP 185

[Close]
BLAST of Cucsa.280300 vs. TAIR10
Match: AT1G70760.1 (AT1G70760.1 inorganic carbon transport protein-related)

HSP 1 Score: 179.1 bits (453), Expect = 2.6e-45
Identity = 98/190 (51.58%), Postives = 120/190 (63.16%), Query Frame = 1 

Query: 4   KCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIK-EEDP 63
           +C S+GL + P ALPSLS       S+ SPF       + S++ P +  +    K     
Sbjct: 3   RCGSLGL-YAPNALPSLSLKPR---SVKSPF------CITSHTKPNDTLLHNVNKMRAKA 62

Query: 64  IGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPI 123
              L  KKT LA  L A LAT+  PA A+TG NN +  L+ V+  +G+I  +YFLV PPI
Sbjct: 63  CDILGAKKTILAAQLGAVLATIDHPALAITGVNNQQ-ELSSVVLDIGIISVWYFLVMPPI 122

Query: 124 IMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPS 183
           IMNWLR+RWYRR   EMYLQFM VF+FFPG+LLWAPFLNFRKFPRDP+MK PW  P DP 
Sbjct: 123 IMNWLRVRWYRRKFFEMYLQFMFVFMFFPGLLLWAPFLNFRKFPRDPNMKNPWDKPTDPD 181

Query: 184 KIKKCVLEIP 193
            IK   L+ P
Sbjct: 183 SIKNVYLKYP 181

[Close]
BLAST of Cucsa.280300 vs. NCBI nr
Match: gi|449464794|ref|XP_004150114.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sativus])

HSP 1 Score: 393.3 bits (1009), Expect = 2.5e-106
Identity = 187/192 (97.40%), Postives = 188/192 (97.92%), Query Frame = 1 

Query: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60
           MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE
Sbjct: 1   MNMKCCSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEE 60

Query: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120
           DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP
Sbjct: 61  DPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFP 120

Query: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180
           PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD
Sbjct: 121 PIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQD 180

Query: 181 PSKIKKCVLEIP 193
           PSKIK   L+ P
Sbjct: 181 PSKIKNAYLKYP 192

[Close]
BLAST of Cucsa.280300 vs. NCBI nr
Match: gi|659074603|ref|XP_008437693.1| (PREDICTED: uncharacterized protein LOC103483037 [Cucumis melo])

HSP 1 Score: 276.6 bits (706), Expect = 3.4e-71
Identity = 129/142 (90.85%), Postives = 135/142 (95.07%), Query Frame = 1 

Query: 51  FKIVGSIKEEDPIGYLHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGV 110
           F+IVGSIKEEDPIGYL KKKTSLAL LAAFLATVGEPASAVTG+NNHEVPLTWVLAQLG 
Sbjct: 3   FEIVGSIKEEDPIGYLDKKKTSLALQLAAFLATVGEPASAVTGDNNHEVPLTWVLAQLGF 62

Query: 111 IGFFYFLVFPPIIMNWLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPS 170
           +GFFYFLVFPPIIMNWLRIRWYRRNLLEMY+QFMCVFLFFPGILLWAPFLNFRKFPRDPS
Sbjct: 63  VGFFYFLVFPPIIMNWLRIRWYRRNLLEMYIQFMCVFLFFPGILLWAPFLNFRKFPRDPS 122

Query: 171 MKYPWSTPQDPSKIKKCVLEIP 193
           MKYPWSTPQDPS+IK   L+ P
Sbjct: 123 MKYPWSTPQDPSQIKNAYLKYP 144

[Close]
BLAST of Cucsa.280300 vs. NCBI nr
Match: gi|1009154931|ref|XP_015895439.1| (PREDICTED: NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Ziziphus jujuba])

HSP 1 Score: 219.9 bits (559), Expect = 3.8e-54
Identity = 115/187 (61.50%), Postives = 135/187 (72.19%), Query Frame = 1 

Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGY 65
           CSI    IPKALPSLS       SL+   K  + NI  +N + K  + V     ++P+ Y
Sbjct: 3   CSISF-QIPKALPSLSRPIQR-ASLFITSKHRDCNI--TNHSKKKLEHV----IQNPLEY 62

Query: 66  LHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMN 125
            H KK SLA+H+   LATV +PA AVTG N +E  LTWVL QLG++ FFYFLV PPI+MN
Sbjct: 63  FHVKKASLAIHVGTVLATVEQPAFAVTGVN-YEADLTWVLIQLGIVAFFYFLVVPPIVMN 122

Query: 126 WLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIK 185
           WLRIRWY+RNLLEMY QFM VFLFFPG+LLWAPFLNFRKFPRDPSMKYPWS P+DPS+IK
Sbjct: 123 WLRIRWYKRNLLEMYFQFMFVFLFFPGVLLWAPFLNFRKFPRDPSMKYPWSKPEDPSQIK 180

Query: 186 KCVLEIP 193
              L+ P
Sbjct: 183 NAFLKFP 180

[Close]
BLAST of Cucsa.280300 vs. NCBI nr
Match: gi|703119800|ref|XP_010101957.1| (NAD(P)H-quinone oxidoreductase subunit L [Morus notabilis])

HSP 1 Score: 212.2 bits (539), Expect = 7.9e-52
Identity = 112/187 (59.89%), Postives = 130/187 (69.52%), Query Frame = 1 

Query: 6   CSIGLLHIPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGY 65
           CSI   HIPKALPSL   +   P   +    H      S +   N + + SI ++ P+ Y
Sbjct: 3   CSISF-HIPKALPSLGLPQRRNPLSVTSKHSH------SCTAKLNQETMASIIQK-PVEY 62

Query: 66  LHKKKTSLALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMN 125
            H KK+SLA+ + A LA V +PA AVTG NN E  LTW L QLGV+ FFYFLV PPIIMN
Sbjct: 63  FHMKKSSLAVQIGAVLAIVEQPAFAVTGVNN-EQDLTWTLIQLGVVAFFYFLVMPPIIMN 122

Query: 126 WLRIRWYRRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIK 185
           WLRIRWY+RNLLE Y QFM VF+FF G+LLWAPFLNFRKFPRDPSMKYPWS P+DPSKIK
Sbjct: 123 WLRIRWYKRNLLETYFQFMFVFIFFAGVLLWAPFLNFRKFPRDPSMKYPWSKPEDPSKIK 180

Query: 186 KCVLEIP 193
              L+ P
Sbjct: 183 NAYLKYP 180

[Close]
BLAST of Cucsa.280300 vs. NCBI nr
Match: gi|645229355|ref|XP_008221428.1| (PREDICTED: uncharacterized protein LOC103321412 isoform X2 [Prunus mume])

HSP 1 Score: 210.7 bits (535), Expect = 2.3e-51
Identity = 105/180 (58.33%), Postives = 130/180 (72.22%), Query Frame = 1 

Query: 13  IPKALPSLSSSKTLFPSLYSPFKLHNFNILPSNSNPKNFKIVGSIKEEDPIGYLHKKKTS 72
           IP+ALPSLS  +    ++ S  +         + +PK  + V +   ++P  Y H KK+S
Sbjct: 9   IPQALPSLSHPRRTSVTITSQHR--------QSYDPKPEETVITSIFQNPADYFHLKKSS 68

Query: 73  LALHLAAFLATVGEPASAVTGENNHEVPLTWVLAQLGVIGFFYFLVFPPIIMNWLRIRWY 132
           LA+ + A LAT+ +PA AVTG N  E  L WVL Q GVI F+YFL+ PPIIMNWLRIRWY
Sbjct: 69  LAIQVGAVLATIEQPAFAVTGVNFEE-DLIWVLIQSGVIAFWYFLLMPPIIMNWLRIRWY 128

Query: 133 RRNLLEMYLQFMCVFLFFPGILLWAPFLNFRKFPRDPSMKYPWSTPQDPSKIKKCVLEIP 192
           +RNLLEMYLQFMC+FLFFPG+LLWAPFLNFRKFPRDPSMKYPWSTP+DP ++K   L+ P
Sbjct: 129 KRNLLEMYLQFMCIFLFFPGVLLWAPFLNFRKFPRDPSMKYPWSTPEDPDQVKAGFLKYP 179

The following BLAST results are available for this feature:
BLAST of Cucsa.280300 vs. Swiss-Prot
Match NameE-valueIdentityDescription
NDHL_ARATH4.7e-4451.58NAD(P)H-quinone oxidoreductase subunit L, chloroplastic OS=Arabidopsis thaliana ... [more]
NDHL_THEEB9.2e-0843.75NAD(P)H-quinone oxidoreductase subunit L OS=Thermosynechococcus elongatus (strai... [more]
NDHL_SYNPX1.2e-0743.33NAD(P)H-quinone oxidoreductase subunit L OS=Synechococcus sp. (strain WH8102) GN... [more]
NDHL_PROMM2.0e-0741.67NAD(P)H-quinone oxidoreductase subunit L OS=Prochlorococcus marinus (strain MIT ... [more]
NDHL_TRIEI2.7e-0748.98NAD(P)H-quinone oxidoreductase subunit L OS=Trichodesmium erythraeum (strain IMS... [more]
BLAST of Cucsa.280300 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSV9_CUCSA1.8e-10697.40Uncharacterized protein OS=Cucumis sativus GN=Csa_5G569340 PE=4 SV=1[more]
W9S5X4_9ROSA5.5e-5259.89NAD(P)H-quinone oxidoreductase subunit L OS=Morus notabilis GN=L484_011974 PE=4 ... [more]
A0A0F7CYX7_9ROSI9.4e-5260.77NADH dehydrogenase-like complex L OS=Francoa sonchifolia GN=NDHL PE=2 SV=1[more]
D7T8Q0_VITVI2.7e-5157.75Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g05290 PE=4 SV=... [more]
A0A0D2NDM9_GOSRA5.2e-5058.33Uncharacterized protein OS=Gossypium raimondii GN=B456_005G159500 PE=4 SV=1[more]
BLAST of Cucsa.280300 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G70760.12.6e-4551.58 inorganic carbon transport protein-related[more]
BLAST of Cucsa.280300 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449464794|ref|XP_004150114.1|2.5e-10697.40PREDICTED: NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Cucumis sati... [more]
gi|659074603|ref|XP_008437693.1|3.4e-7190.85PREDICTED: uncharacterized protein LOC103483037 [Cucumis melo][more]
gi|1009154931|ref|XP_015895439.1|3.8e-5461.50PREDICTED: NAD(P)H-quinone oxidoreductase subunit L, chloroplastic [Ziziphus juj... [more]
gi|703119800|ref|XP_010101957.1|7.9e-5259.89NAD(P)H-quinone oxidoreductase subunit L [Morus notabilis][more]
gi|645229355|ref|XP_008221428.1|2.3e-5158.33PREDICTED: uncharacterized protein LOC103321412 isoform X2 [Prunus mume][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR019654NADH-quinone_OxRdatse_su_L
Vocabulary: Molecular Function
TermDefinition
GO:0016655oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0010258 NADH dehydrogenase complex (plastoquinone) assembly
biological_process GO:0055114 oxidation-reduction process
biological_process GO:0044763 single-organism cellular process
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0010598 NAD(P)H dehydrogenase complex (plastoquinone)
cellular_component GO:0005575 cellular_component
molecular_function GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.280300.1Cucsa.280300.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019654NAD(P)H-quinone oxidoreductase subunit LPFAMPF10716NdhLcoord: 96..168
score: 1.7
NoneNo IPR availablePANTHERPTHR36727FAMILY NOT NAMEDcoord: 55..186
score: 2.0
NoneNo IPR availablePANTHERPTHR36727:SF2SUBFAMILY NOT NAMEDcoord: 55..186
score: 2.0