Cucsa.254890 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.254890
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionPrenylated rab acceptor PRA1
Locationscaffold02229 : 3092037 .. 3093012 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGACTGTCATTTCTTTCGTATACATTTTTTTTCCTTATTTTAAAATTTTAATTTCATATTTATAGAATTCTCATTTAAGATTGAATTGGATCATTCATATAAATCAGTATAAAGTAAGGTGAGACTCAAGATTTAAGCTTCGGAATTGGGATCTTTCTCTTTTTTGTATTTCTTTCCATTTCGGAGCTCCGGCGAGAATTTTCAGATTTTTATCCCAATGTCTACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCAACTCGCCGTCCATGGCGGGAATTCCTAGACCCATCGGCTCTCAGCCTTCCTTCTTCCCTCTCGGACGCTACGACTCGGATTTCTCATAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATTTTTCTTGGCCTCATTTACCATCCATTTTCCATGATTGTCTTCTTACTCGTCTTTGTTGCCTGGTTCTTTCTTTACTTTTCTCGCGATGACCCAATTAGGGTTTTTGGTTTTGAGTTGGATGATTTGGTTTTGATTATTATTCTTGGATTGGCTACTGGTTTGGCGCTGGCTTTGACTGGGGTTTTTGTGAATGTGCTGATTTCACTTGCAATTGGGGCTGTGGTGGTTTGCTTGCATGCGGCTTTGAGGAGTACTGAGGATCTTGTTGGGGATATGCAAGACCCTTTTGGGGATGCCCTTTTGGAGAGTCCAAGAGGTGATTACAGCGGTATCTGATTGAATATGTGGGTTTGTCTCGAGATTTAACCATTTGGACTTCTGTTTTTCTTTTTCAATTGGTTTAGTGATAGTTGCTGGTCTATATACTGGTATTTTTAGATGAAATGTACATTGCAGAACACAATGAATTGCAGAAAATTATTCACGTCCATTATGCTCATAATCTAGATTCTTCTGCATTATTGTTTTGAATTAAAATTAGTCGCTTGTGTTGTTAGTGTTGAT

mRNA sequence

TGACTGTCATTTCTTTCGTATACATTTTTTTTCCttattttaaaattttaatttcatatttataGAATTCTCATTTAAGATTGAATTGGATCATTCATATAAATCAGTATAAAGTAAGGTGAGACTCAAGATTTAAGCTTCGGAATTGGGATCTTTCTCTTTTTTGTATTTCTTTCCATTTCGGAGCTCCGGCGAGAATTTTCAGATTTTTATCCCAATGTCTACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCAACTCGCCGTCCATGGCGGGAATTCCTAGACCCATCGGCTCTCAGCCTTCCTTCTTCCCTCTCGGACGCTACGACTCGGATTTCTCATAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATTTTTCTTGGCCTCATTTACCATCCATTTTCCATGATTGTCTTCTTACTCGTCTTTGTTGCCTGGTTCTTTCTTTACTTTTCTCGCGATGACCCAATTAGGGTTTTTGGTTTTGAGTTGGATGATTTGGTTTTGATTATTATTCTTGGATTGGCTACTGGTTTGGCGCTGGCTTTGACTGGGGTTTTTGTGAATGTGCTGATTTCACTTGCAATTGGGGCTGTGGTGGTTTGCTTGCATGCGGCTTTGAGGAGTACTGAGGATCTTGTTGGGGATATGCAAGACCCTTTTGGGGATGCCCTTTTGGAGAGTCCAAGAGGTGATTACAGCGGTATCTGATTGAATATGTGGGTTTGTCTCGAGATTTAACCATTTGGACTTCTGTTTTTCTTTTTCAATTGGTTTAGTGATAGTTGCTGGTCTATATACTGGTATTTTTAGATGAAATGTACATTGCAGAACACAATGAATTGCAGAAAATTATTCACGTCCATTATGCTCATAATCTAGATTCTTCTGCATTATTGTTTTGAATTAAAATTAGTCGCTTGTGTTGTTAGTGTTGAT

Coding sequence (CDS)

ATGTCTACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCAACTCGCCGTCCATGGCGGGAATTCCTAGACCCATCGGCTCTCAGCCTTCCTTCTTCCCTCTCGGACGCTACGACTCGGATTTCTCATAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCGTCTTGCTTCTCATTTTTCTTGGCCTCATTTACCATCCATTTTCCATGATTGTCTTCTTACTCGTCTTTGTTGCCTGGTTCTTTCTTTACTTTTCTCGCGATGACCCAATTAGGGTTTTTGGTTTTGAGTTGGATGATTTGGTTTTGATTATTATTCTTGGATTGGCTACTGGTTTGGCGCTGGCTTTGACTGGGGTTTTTGTGAATGTGCTGATTTCACTTGCAATTGGGGCTGTGGTGGTTTGCTTGCATGCGGCTTTGAGGAGTACTGAGGATCTTGTTGGGGATATGCAAGACCCTTTTGGGGATGCCCTTTTGGAGAGTCCAAGAGGTGATTACAGCGGTATCTGA

Protein sequence

MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI*
Homology
[Close]
BLAST of Cucsa.254890 vs. Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.7e-38
Identity = 80/174 (45.98%), Postives = 120/174 (68.97%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S+    RPW +FLD SA S PSS++DATTR++ NLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDD-LVLIIILGLATGLALALTGVFVN 130
             P +++ F+ V +AWFFLYF+R++P+ +FGF +DD +V ++++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 131 VLISLAIGAVVVCLHAALRSTEDLVG-DMQDPFGDALLES------PRGDYSGI 177
            L ++  G +V+ LHAALR T+DLV  D++ P+G  L  S       RGDYSGI
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182

[Close]
BLAST of Cucsa.254890 vs. Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.5e-36
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           K+  +S+I T RPWRE LD SALSLP    +A   + HN++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGVFV 130
           YHP SMI F++VF+ W  LYFSRD  D I + G E+DD +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 131 NVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGD 173
           NVL+SL IG ++V  H A R+T+DL  D +      L+ +  G+
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200

[Close]
BLAST of Cucsa.254890 vs. Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-31
Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 1 

Query: 18  IATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPFSMI 77
           +ATRR WR   D  ++ LP  +SDA TRI  NL  F  NY +VVL++IF  LI+HP S+I
Sbjct: 33  LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 92

Query: 78  VFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISLAIG 137
           VF ++ V W FLYF RD+PI++F F++DD  ++I+L + T + L LT    N++ +L  G
Sbjct: 93  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 152

Query: 138 AVVVCLHAALRSTEDLVGD 157
           AV+V +H+ +R TEDL  D
Sbjct: 153 AVLVLIHSVVRKTEDLFLD 171

[Close]
BLAST of Cucsa.254890 vs. Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 62/139 (44.60%), Postives = 91/139 (65.47%), Query Frame = 1 

Query: 15  RSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPF 74
           RS +ATRRPW++ LD  + + P  L+   TRI  N   F +NY +VVL  +FL LI++PF
Sbjct: 30  RSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPF 89

Query: 75  SMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISL 134
           S++V L +  AW FLYF RD+P+ VF  E+D  +++II+ + T   L LT   +N+ +++
Sbjct: 90  SLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAI 149

Query: 135 AIGAVVVCLHAALRSTEDL 154
             GA+ V  HAA+R TEDL
Sbjct: 150 VAGALAVLSHAAVRKTEDL 168

[Close]
BLAST of Cucsa.254890 vs. Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 6.6e-29
Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 1 

Query: 5   EFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLL 64
           E+    K   +S +ATRRPW+   D  +++LP    DA +RI  NL  F +NY + VL +
Sbjct: 20  EYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFI 79

Query: 65  IFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALT 124
           +FL L+YHP S+IV  ++ V W FLYF RD+P+ VFG+++DD  ++I L + T + L LT
Sbjct: 80  LFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139

Query: 125 GVFVNVLISLAIGAVVVCLHAALRSTEDLVGD 157
               N+L SL   AV+V +HAA+R +++L  D
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]
BLAST of Cucsa.254890 vs. TrEMBL
Match: A0A0A0L7A7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 6.5e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1 

Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60
           MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120
           VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI 177
           LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI 176

[Close]
BLAST of Cucsa.254890 vs. TrEMBL
Match: M5XFQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 94/167 (56.29%), Postives = 124/167 (74.25%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S IAT RPW E L+P+ALSLPS+LS+ TTR++ NLT F SNY LV+L+++FL LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNV 130
           YHP S+IVFL++F AW  LYFSRD P+ VFGF + D V+++ILGL T LAL LT V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 131 LISLAIGAVVVCLHAALRSTEDLV-GDMQDPFGDALL--ESPRGDYS 175
           ++S+ IG  +V LHA  R TEDLV  D + P+G  L   + P G+Y+
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMDDQESPYGALLSDDQDPSGNYT 176

[Close]
BLAST of Cucsa.254890 vs. TrEMBL
Match: A0A061ENE3_THECC (CAMV movement protein interacting protein 7, putative OS=Theobroma cacao GN=TCM_020782 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 3.5e-45
Identity = 97/177 (54.80%), Postives = 131/177 (74.01%), Query Frame = 1 

Query: 9   TFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLG 68
           + KE  +S+ A RRPWREFLD +A+ LPSS SD TTRI+ NLT F  NY +++LL++FL 
Sbjct: 7   SLKETAQSLTAIRRPWREFLDITAVDLPSSFSDVTTRIAQNLTHFRLNYTVILLLILFLS 66

Query: 69  LIYHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGV 128
           LIYHP S++ FL++ +AWFFLYF+RD  +P+ +FGF +D+ ++I  L   T   L LTGV
Sbjct: 67  LIYHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFTIDERLVIAALFGLTVAGLVLTGV 126

Query: 129 FVNVLISLAIGAVVVCLHAALRSTEDLV-GDMQDPFGDAL------LESPRGDYSGI 177
           ++NVL ++AIGA +V LHAALRST+DLV  D++ P+G  L      L+SPRGDYSGI
Sbjct: 127 WLNVLGAVAIGASMVILHAALRSTDDLVMDDLESPYGHVLAGGDEELDSPRGDYSGI 183

[Close]
BLAST of Cucsa.254890 vs. TrEMBL
Match: A0A067EJ32_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 7.8e-45
Identity = 101/180 (56.11%), Postives = 125/180 (69.44%), Query Frame = 1 

Query: 2   STAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVV 61
           S   F    K   +S+ ATRRPW +FLD SA +LP SLSDATTRI+ NLT F SNY ++ 
Sbjct: 7   SDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVIT 66

Query: 62  LLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLAL 121
           LL +FL LIYHP S+IVFLL  VAWFFLYF+RDDP+ V GF++DD V+I  L   T   L
Sbjct: 67  LLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGL 126

Query: 122 ALTGVFVNVLISLAIGAVVVCLHAALRSTEDLV-GDMQDPFG----DALLESPRGDYSGI 177
            LT V+VNVL+S+ +GAV+V LHA  RST+DLV  D + PFG    D   +S RG Y+G+
Sbjct: 127 VLTHVWVNVLVSVVVGAVLVILHAWFRSTDDLVMEDQESPFGVLLDDLGGDSARGSYTGL 186

[Close]
BLAST of Cucsa.254890 vs. TrEMBL
Match: A0A0D2NY05_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G246200 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 2.3e-44
Identity = 96/175 (54.86%), Postives = 126/175 (72.00%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           K   +S+ A RRPWR+F D S + LPSS SDATTRI+ NLT F  NY L++LL++FL LI
Sbjct: 9   KGTTQSLTALRRPWRDFFDISTVDLPSSTSDATTRIAQNLTHFRLNYTLILLLILFLSLI 68

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGVFV 130
           YHP S++ FL++ +AWFFLYF+RD  +P+ +FGF +DD ++I  L   T   L LTGV+V
Sbjct: 69  YHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFFIDDRIVIAALFGLTVAGLVLTGVWV 128

Query: 131 NVLISLAIGAVVVCLHAALRSTEDLV-GDMQDPFGDAL------LESPRGDYSGI 177
           NVL++LA+G   V LHA LRST+DLV  D++ P+G  L      L+SPRGDYSGI
Sbjct: 129 NVLVALAVGVGFVILHAGLRSTDDLVMDDLESPYGHVLAGGDDELDSPRGDYSGI 183

[Close]
BLAST of Cucsa.254890 vs. TAIR10
Match: AT1G04260.1 (AT1G04260.1 CAMV movement protein interacting protein 7)

HSP 1 Score: 159.8 bits (403), Expect = 1.5e-39
Identity = 80/174 (45.98%), Postives = 120/174 (68.97%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S+    RPW +FLD SA S PSS++DATTR++ NLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDD-LVLIIILGLATGLALALTGVFVN 130
             P +++ F+ V +AWFFLYF+R++P+ +FGF +DD +V ++++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 131 VLISLAIGAVVVCLHAALRSTEDLVG-DMQDPFGDALLES------PRGDYSGI 177
            L ++  G +V+ LHAALR T+DLV  D++ P+G  L  S       RGDYSGI
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSGI 182

[Close]
BLAST of Cucsa.254890 vs. TAIR10
Match: AT1G08770.1 (AT1G08770.1 prenylated RAB acceptor 1.E)

HSP 1 Score: 153.3 bits (386), Expect = 1.4e-37
Identity = 78/164 (47.56%), Postives = 106/164 (64.63%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           K+  +S+I T RPWRE LD SALSLP    +A   + HN++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGVFV 130
           YHP SMI F++VF+ W  LYFSRD  D I + G E+DD +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 131 NVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGD 173
           NVL+SL IG ++V  H A R+T+DL  D +      L+ +  G+
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200

[Close]
BLAST of Cucsa.254890 vs. TAIR10
Match: AT3G13720.1 (AT3G13720.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 137.5 bits (345), Expect = 8.0e-33
Identity = 66/139 (47.48%), Postives = 94/139 (67.63%), Query Frame = 1 

Query: 18  IATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPFSMI 77
           +ATRR WR   D  ++ LP  +SDA TRI  NL  F  NY +VVL++IF  LI+HP S+I
Sbjct: 33  LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 92

Query: 78  VFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISLAIG 137
           VF ++ V W FLYF RD+PI++F F++DD  ++I+L + T + L LT    N++ +L  G
Sbjct: 93  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 152

Query: 138 AVVVCLHAALRSTEDLVGD 157
           AV+V +H+ +R TEDL  D
Sbjct: 153 AVLVLIHSVVRKTEDLFLD 171

[Close]
BLAST of Cucsa.254890 vs. TAIR10
Match: AT1G55190.1 (AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-30
Identity = 65/152 (42.76%), Postives = 97/152 (63.82%), Query Frame = 1 

Query: 5   EFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLL 64
           E+    K   +S +ATRRPW+   D  +++LP    DA +RI  NL  F +NY + VL +
Sbjct: 20  EYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFI 79

Query: 65  IFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALT 124
           +FL L+YHP S+IV  ++ V W FLYF RD+P+ VFG+++DD  ++I L + T + L LT
Sbjct: 80  LFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139

Query: 125 GVFVNVLISLAIGAVVVCLHAALRSTEDLVGD 157
               N+L SL   AV+V +HAA+R +++L  D
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]
BLAST of Cucsa.254890 vs. TAIR10
Match: AT1G17700.1 (AT1G17700.1 prenylated RAB acceptor 1.F1)

HSP 1 Score: 128.6 bits (322), Expect = 3.7e-30
Identity = 62/139 (44.60%), Postives = 91/139 (65.47%), Query Frame = 1 

Query: 15  RSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLIYHPF 74
           RS +ATRRPW++ LD  + + P  L+   TRI  N   F +NY +VVL  +FL LI++PF
Sbjct: 30  RSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPF 89

Query: 75  SMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNVLISL 134
           S++V L +  AW FLYF RD+P+ VF  E+D  +++II+ + T   L LT   +N+ +++
Sbjct: 90  SLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAI 149

Query: 135 AIGAVVVCLHAALRSTEDL 154
             GA+ V  HAA+R TEDL
Sbjct: 150 VAGALAVLSHAAVRKTEDL 168

[Close]
BLAST of Cucsa.254890 vs. NCBI nr
Match: gi|659076256|ref|XP_008438582.1| (PREDICTED: PRA1 family protein D [Cucumis melo])

HSP 1 Score: 344.7 bits (883), Expect = 9.3e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 1 

Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60
           MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120
           VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI 177
           LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSGI 176

[Close]
BLAST of Cucsa.254890 vs. NCBI nr
Match: gi|470104050|ref|XP_004288430.1| (PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 193.0 bits (489), Expect = 4.5e-46
Identity = 99/177 (55.93%), Postives = 127/177 (71.75%), Query Frame = 1 

Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60
           MST      FKEAG+S +A  RPW EF D SALSLP + SDATTR+  N T F SNY ++
Sbjct: 1   MSTG-IVTRFKEAGQSAMAAHRPWSEFSDLSALSLPQNFSDATTRLFQNSTHFRSNYAML 60

Query: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120
           VL+++FL L+YHP S+IVFLLVF AW F YFSRDD + VFGF + D V++ +LGL T +A
Sbjct: 61  VLVVLFLSLLYHPVSLIVFLLVFAAWVFFYFSRDDDVSVFGFVVGDRVVMAVLGLVTVVA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLV-GDMQDPFGDALLE--SPRGDYS 175
           L LT V++NV++S  +GAVVVC+HA  R TEDLV  D + P+G  L +   PRG+Y+
Sbjct: 121 LVLTNVWLNVVVSGVVGAVVVCVHAVFRGTEDLVMEDKESPYGALLSDDPDPRGNYT 176

[Close]
BLAST of Cucsa.254890 vs. NCBI nr
Match: gi|590658846|ref|XP_007034966.1| (CAMV movement protein interacting protein 7, putative [Theobroma cacao])

HSP 1 Score: 189.5 bits (480), Expect = 5.0e-45
Identity = 97/177 (54.80%), Postives = 131/177 (74.01%), Query Frame = 1 

Query: 9   TFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLG 68
           + KE  +S+ A RRPWREFLD +A+ LPSS SD TTRI+ NLT F  NY +++LL++FL 
Sbjct: 7   SLKETAQSLTAIRRPWREFLDITAVDLPSSFSDVTTRIAQNLTHFRLNYTVILLLILFLS 66

Query: 69  LIYHPFSMIVFLLVFVAWFFLYFSRD--DPIRVFGFELDDLVLIIILGLATGLALALTGV 128
           LIYHP S++ FL++ +AWFFLYF+RD  +P+ +FGF +D+ ++I  L   T   L LTGV
Sbjct: 67  LIYHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFTIDERLVIAALFGLTVAGLVLTGV 126

Query: 129 FVNVLISLAIGAVVVCLHAALRSTEDLV-GDMQDPFGDAL------LESPRGDYSGI 177
           ++NVL ++AIGA +V LHAALRST+DLV  D++ P+G  L      L+SPRGDYSGI
Sbjct: 127 WLNVLGAVAIGASMVILHAALRSTDDLVMDDLESPYGHVLAGGDEELDSPRGDYSGI 183

[Close]
BLAST of Cucsa.254890 vs. NCBI nr
Match: gi|596194906|ref|XP_007223565.1| (hypothetical protein PRUPE_ppa012254mg [Prunus persica])

HSP 1 Score: 189.5 bits (480), Expect = 5.0e-45
Identity = 94/167 (56.29%), Postives = 124/167 (74.25%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S IAT RPW E L+P+ALSLPS+LS+ TTR++ NLT F SNY LV+L+++FL LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 71  YHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLALALTGVFVNV 130
           YHP S+IVFL++F AW  LYFSRD P+ VFGF + D V+++ILGL T LAL LT V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 131 LISLAIGAVVVCLHAALRSTEDLV-GDMQDPFGDALL--ESPRGDYS 175
           ++S+ IG  +V LHA  R TEDLV  D + P+G  L   + P G+Y+
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMDDQESPYGALLSDDQDPSGNYT 176

[Close]
BLAST of Cucsa.254890 vs. NCBI nr
Match: gi|568872715|ref|XP_006489511.1| (PREDICTED: PRA1 family protein D [Citrus sinensis])

HSP 1 Score: 188.7 bits (478), Expect = 8.5e-45
Identity = 101/180 (56.11%), Postives = 125/180 (69.44%), Query Frame = 1 

Query: 2   STAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLVV 61
           S   F    K   +S+ ATRRPW +FLD SA +LP SLSDATTRI+ NLT F SNY ++ 
Sbjct: 7   SDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVIT 66

Query: 62  LLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLAL 121
           LL +FL LIYHP S+IVFLL  VAWFFLYF+RDDP+ V GF++DD V+I  L   T   L
Sbjct: 67  LLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGL 126

Query: 122 ALTGVFVNVLISLAIGAVVVCLHAALRSTEDLV-GDMQDPFG----DALLESPRGDYSGI 177
            LT V+VNVL+S+ +GAV+V LHA  RST+DLV  D + PFG    D   +S RG Y+G+
Sbjct: 127 VLTHVWVNVLVSVVVGAVLVILHAWFRSTDDLVMDDQESPFGVLLDDLGGDSARGSYTGL 186

The following BLAST results are available for this feature:
BLAST of Cucsa.254890 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRA1D_ARATH2.7e-3845.98PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1[more]
PRA1E_ARATH2.5e-3647.56PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1[more]
PR1F3_ARATH1.4e-3147.48PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1[more]
PR1F1_ARATH6.6e-2944.60PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1[more]
PR1F2_ARATH6.6e-2942.76PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1[more]
BLAST of Cucsa.254890 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7A7_CUCSA6.5e-92100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1[more]
M5XFQ2_PRUPE3.5e-4556.29Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1[more]
A0A061ENE3_THECC3.5e-4554.80CAMV movement protein interacting protein 7, putative OS=Theobroma cacao GN=TCM_... [more]
A0A067EJ32_CITSI7.8e-4556.11Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1[more]
A0A0D2NY05_GOSRA2.3e-4454.86Uncharacterized protein OS=Gossypium raimondii GN=B456_006G246200 PE=4 SV=1[more]
BLAST of Cucsa.254890 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04260.11.5e-3945.98 CAMV movement protein interacting protein 7[more]
AT1G08770.11.4e-3747.56 prenylated RAB acceptor 1.E[more]
AT3G13720.18.0e-3347.48 PRA1 (Prenylated rab acceptor) family protein[more]
AT1G55190.13.7e-3042.76 PRA1 (Prenylated rab acceptor) family protein[more]
AT1G17700.13.7e-3044.60 prenylated RAB acceptor 1.F1[more]
BLAST of Cucsa.254890 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076256|ref|XP_008438582.1|9.3e-92100.00PREDICTED: PRA1 family protein D [Cucumis melo][more]
gi|470104050|ref|XP_004288430.1|4.5e-4655.93PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca][more]
gi|590658846|ref|XP_007034966.1|5.0e-4554.80CAMV movement protein interacting protein 7, putative [Theobroma cacao][more]
gi|596194906|ref|XP_007223565.1|5.0e-4556.29hypothetical protein PRUPE_ppa012254mg [Prunus persica][more]
gi|568872715|ref|XP_006489511.1|8.5e-4556.11PREDICTED: PRA1 family protein D [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044765 single-organism transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
biological_process GO:0008150 biological_process
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005730 nucleolus
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0003899 DNA-directed RNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.254890.1Cucsa.254890.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 18..154
score: 2.0
NoneNo IPR availablePANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 1..166
score: 1.3
NoneNo IPR availablePANTHERPTHR19317:SF3PRA1 FAMILY PROTEIN Ecoord: 1..166
score: 1.3

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.254890Cla021568Watermelon (97103) v1cgywmB479
Cucsa.254890Cla006017Watermelon (97103) v1cgywmB475
Cucsa.254890Csa2G224290Cucumber (Chinese Long) v2cgycuB363
Cucsa.254890Csa3G143550Cucumber (Chinese Long) v2cgycuB366
Cucsa.254890MELO3C006474Melon (DHL92) v3.5.1cgymeB439
Cucsa.254890ClCG07G000640Watermelon (Charleston Gray)cgywcgB457
Cucsa.254890CSPI03G12510Wild cucumber (PI 183967)cgycpiB383
Cucsa.254890CSPI02G11210Wild cucumber (PI 183967)cgycpiB379
Cucsa.254890CmaCh14G017760Cucurbita maxima (Rimu)cgycmaB0709
Cucsa.254890CmaCh06G013430Cucurbita maxima (Rimu)cgycmaB0727
Cucsa.254890CmoCh06G013540Cucurbita moschata (Rifu)cgycmoB0718
Cucsa.254890CmoCh14G018130Cucurbita moschata (Rifu)cgycmoB0700
Cucsa.254890Lsi05G016670Bottle gourd (USVL1VR-Ls)cgylsiB415
Cucsa.254890Cp4.1LG03g10250Cucurbita pepo (Zucchini)cgycpeB0682
Cucsa.254890Cp4.1LG08g03750Cucurbita pepo (Zucchini)cgycpeB0687
Cucsa.254890MELO3C006474.2Melon (DHL92) v3.6.1cgymedB432
Cucsa.254890CsaV3_3G012630Cucumber (Chinese Long) v3cgycucB387
Cucsa.254890Cla97C05G085680Watermelon (97103) v2cgywmbB452
Cucsa.254890BhiUN393G9Wax gourdcgywgoB530
Cucsa.254890Bhi05G000197Wax gourdcgywgoB529
Cucsa.254890Carg08987Silver-seed gourdcarcgyB0888
Cucsa.254890Carg16589Silver-seed gourdcarcgyB0276
Cucsa.254890Carg06194Silver-seed gourdcarcgyB1077
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.254890Melon (DHL92) v3.6.1cgymedB429
Cucsa.254890Silver-seed gourdcarcgyB0269
Cucsa.254890Cucumber (Chinese Long) v3cgycucB385
Cucsa.254890Watermelon (97103) v2cgywmbB453
Cucsa.254890Cucumber (Gy14) v1cgycgyB079
Cucsa.254890Cucurbita maxima (Rimu)cgycmaB0714
Cucsa.254890Cucurbita maxima (Rimu)cgycmaB0731
Cucsa.254890Cucurbita moschata (Rifu)cgycmoB0707
Cucsa.254890Cucurbita moschata (Rifu)cgycmoB0720
Cucsa.254890Wild cucumber (PI 183967)cgycpiB378
Cucsa.254890Wild cucumber (PI 183967)cgycpiB380
Cucsa.254890Cucumber (Chinese Long) v2cgycuB362
Cucsa.254890Cucumber (Chinese Long) v2cgycuB364
Cucsa.254890Melon (DHL92) v3.5.1cgymeB434
Cucsa.254890Melon (DHL92) v3.5.1cgymeB436
Cucsa.254890Watermelon (Charleston Gray)cgywcgB448
Cucsa.254890Watermelon (Charleston Gray)cgywcgB451
Cucsa.254890Watermelon (Charleston Gray)cgywcgB452
Cucsa.254890Watermelon (97103) v1cgywmB483
Cucsa.254890Cucurbita pepo (Zucchini)cgycpeB0672
Cucsa.254890Cucurbita pepo (Zucchini)cgycpeB0676
Cucsa.254890Bottle gourd (USVL1VR-Ls)cgylsiB412
Cucsa.254890Bottle gourd (USVL1VR-Ls)cgylsiB418