CmoCh14G018130 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh14G018130
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Prenylated Rab acceptor protein, putative
Location	Cmo_Chr14 : 13851245 .. 13851775 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAATGTCTGCCGCTGAATTCGCCGTCACTTTCAAGGAAGCTGGTCGATCCGTCATCGCCACTCGCTCCCCATGGCGGGAATTCTTAGACCCATCTGCTCTTAGCCTTCCTTCTTCCCTCTCCAACGCTACGACTCGAATGTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTCTCCTCTTGCTCCTCGTCTTACTTGGCCTCATCTACCATCCATTTTCAATGATTGTCTTGTTCCTCGTCTTTGCTGCCTGGTTCTTCCTTTACTTCTCTCGCAACGACCCACTTAGGGTCTTTGGTTTTGACTTGGACGATTTGGTTTTGGTCATCATTCTTGGATTGACTACTGGATTGGCGCTGGCGGGCGTTTTTGTGAATGTGCTGATTTCGCTTGCAATTGGGGCGGTGGTGGTCTGCTTGCATGCGGCTTTGAGGGCTACGGAGGATATTCTTGGAGATTTGCAGGATCCTTTTGGGGATGCCCTGTTGGATAGTCCAAGAGGTGATTATAGCGGCTTCTGA

mRNA sequence

ATGCCAATGTCTGCCGCTGAATTCGCCGTCACTTTCAAGGAAGCTGGTCGATCCGTCATCGCCACTCGCTCCCCATGGCGGGAATTCTTAGACCCATCTGCTCTTAGCCTTCCTTCTTCCCTCTCCAACGCTACGACTCGAATGTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTCTCCTCTTGCTCCTCGTCTTACTTGGCCTCATCTACCATCCATTTTCAATGATTGTCTTGTTCCTCGTCTTTGCTGCCTGGTTCTTCCTTTACTTCTCTCGCAACGACCCACTTAGGGTCTTTGGTTTTGACTTGGACGATTTGGTTTTGGTCATCATTCTTGGATTGACTACTGGATTGGCGCTGGCGGGCGTTTTTGTGAATGTGCTGATTTCGCTTGCAATTGGGGCGGTGGTGGTCTGCTTGCATGCGGCTTTGAGGGCTACGGAGGATATTCTTGGAGATTTGCAGGATCCTTTTGGGGATGCCCTGTTGGATAGTCCAAGAGGTGATTATAGCGGCTTCTGA

Coding sequence (CDS)

ATGCCAATGTCTGCCGCTGAATTCGCCGTCACTTTCAAGGAAGCTGGTCGATCCGTCATCGCCACTCGCTCCCCATGGCGGGAATTCTTAGACCCATCTGCTCTTAGCCTTCCTTCTTCCCTCTCCAACGCTACGACTCGAATGTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTCTCCTCTTGCTCCTCGTCTTACTTGGCCTCATCTACCATCCATTTTCAATGATTGTCTTGTTCCTCGTCTTTGCTGCCTGGTTCTTCCTTTACTTCTCTCGCAACGACCCACTTAGGGTCTTTGGTTTTGACTTGGACGATTTGGTTTTGGTCATCATTCTTGGATTGACTACTGGATTGGCGCTGGCGGGCGTTTTTGTGAATGTGCTGATTTCGCTTGCAATTGGGGCGGTGGTGGTCTGCTTGCATGCGGCTTTGAGGGCTACGGAGGATATTCTTGGAGATTTGCAGGATCCTTTTGGGGATGCCCTGTTGGATAGTCCAAGAGGTGATTATAGCGGCTTCTGA

Homology

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BLAST of CmoCh14G018130 vs. Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.2e-29
Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           KE  +S+     PW +FLD SA S PSS+++ATTR++QNLT F  NY ++L +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 73  YHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDD-LVLVIILGLTTG-LALAGVFVNV 132
             P +++    V  AWFFLYF+R +PL +FGF +DD +V V+++GL+ G L   GV++  
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRA 129

Query: 133 LISLAIGAVVVCLHAALRATEDILG-DLQDPFGDALL------DSPRGDYSG 176
           L ++  G +V+ LHAALR T+D++  DL+ P+G  L       D  RGDYSG
Sbjct: 130 LTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSG 181

[Close]

BLAST of CmoCh14G018130 vs. Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 5.4e-23
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           K+  +S+I T  PWRE LD SALSLP     A   +  N++ F  NY L +L +V LGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 73  YHPFSMIVLFLVFAAWFFLYFSR--NDPLRVFGFDLDDLVLVIILGLTTGLAL--AGVFV 132
           YHP SMI   +VF  W  LYFSR  ND + + G ++DD +++++L L T LAL    V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 133 NVLISLAIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGD 173
           NVL+SL IG ++V  H A R T+D+  D +      L+ +  G+
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200

[Close]

BLAST of CmoCh14G018130 vs. Swiss-Prot
Match: PR1F1_ARATH (PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 1.8e-18
Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = 1


Query: 17  RSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPF 76
           RS +ATR PW++ LD  + + P  L+   TR+  N   F +NY +++L  V L LI++PF
Sbjct: 30  RSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPF 89

Query: 77  SMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTT--GLALAGVFVNVLISL 136
           S++VL  +  AW FLYF R++PL VF  ++D  +++II+ + T   L L    +N+ +++
Sbjct: 90  SLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAI 149

Query: 137 AIGAVVVCLHAALRATEDI 154
             GA+ V  HAA+R TED+
Sbjct: 150 VAGALAVLSHAAVRKTEDL 168

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BLAST of CmoCh14G018130 vs. Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-18
Identity = 56/157 (35.67%), Postives = 93/157 (59.24%), Query Frame = 1


Query: 2   PMSAAEFAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCL 61
           P+   E     K   ++ +ATR  WR   D  ++ LP  +S+A TR+  NL  F  NY +
Sbjct: 15  PLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAI 74

Query: 62  LLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTG- 121
           ++L+++   LI+HP S+IV  ++   W FLYF R++P+++F F +DD  ++I+L + T  
Sbjct: 75  VVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVV 134

Query: 122 -LALAGVFVNVLISLAIGAVVVCLHAALRATEDILGD 157
            L L     N++ +L  GAV+V +H+ +R TED+  D
Sbjct: 135 LLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLD 171

[Close]

BLAST of CmoCh14G018130 vs. Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 2.0e-17
Identity = 59/157 (37.58%), Postives = 93/157 (59.24%), Query Frame = 1


Query: 2   PMSAAEFAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCL 61
           P    E+    K   +S +ATR PW+   D  +++LP    +A +R+  NL  F +NY +
Sbjct: 15  PAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAI 74

Query: 62  LLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTT-- 121
            +L ++ L L+YHP S+IVL ++   W FLYF R++PL VFG+ +DD  ++I L + T  
Sbjct: 75  GVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVV 134

Query: 122 GLALAGVFVNVLISLAIGAVVVCLHAALRATEDILGD 157
            L L     N+L SL   AV+V +HAA+R ++++  D
Sbjct: 135 MLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

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BLAST of CmoCh14G018130 vs. TrEMBL
Match: A0A0A0L7A7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 2.3e-73
Identity = 151/175 (86.29%), Postives = 165/175 (94.29%), Query Frame = 1


Query: 3   MSAAEFAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLL 62
           MS AEFAVTFKEAGRSVIATR PWREFLDPSALSLPSSLS+ATTR+S NLTRFLSNYCL+
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 63  LLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLA 122
           +LLL+ LGLIYHPFSMIV  LVF AWFFLYFSR+DP+RVFGF+LDDLVL+IILGL TGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 123 LA--GVFVNVLISLAIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSG 176
           LA  GVFVNVLISLAIGAVVVCLHAALR+TED++GD+QDPFGDALL+SPRGDYSG
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSG 175

[Close]

BLAST of CmoCh14G018130 vs. TrEMBL
Match: A0A061ENE3_THECC (CAMV movement protein interacting protein 7, putative OS=Theobroma cacao GN=TCM_020782 PE=4 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.5e-35
Identity = 92/176 (52.27%), Postives = 128/176 (72.73%), Query Frame = 1


Query: 11  TFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLG 70
           + KE  +S+ A R PWREFLD +A+ LPSS S+ TTR++QNLT F  NY ++LLL++ L 
Sbjct: 7   SLKETAQSLTAIRRPWREFLDITAVDLPSSFSDVTTRIAQNLTHFRLNYTVILLLILFLS 66

Query: 71  LIYHPFSMIVLFLVFAAWFFLYFSRN--DPLRVFGFDLDD-LVLVIILGLT-TGLALAGV 130
           LIYHP S++   ++  AWFFLYF+R+  +P+ +FGF +D+ LV+  + GLT  GL L GV
Sbjct: 67  LIYHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFTIDERLVIAALFGLTVAGLVLTGV 126

Query: 131 FVNVLISLAIGAVVVCLHAALRATED-ILGDLQDPFGDAL------LDSPRGDYSG 176
           ++NVL ++AIGA +V LHAALR+T+D ++ DL+ P+G  L      LDSPRGDYSG
Sbjct: 127 WLNVLGAVAIGASMVILHAALRSTDDLVMDDLESPYGHVLAGGDEELDSPRGDYSG 182

[Close]

BLAST of CmoCh14G018130 vs. TrEMBL
Match: M5XFQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-34
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           KE  +S IAT  PW E L+P+ALSLPS+LS  TTR++QNLT F SNY L+LL+++ L LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 73  YHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLA--LAGVFVNV 132
           YHP S+IV  ++FAAW  LYFSR+ PL VFGF + D V+++ILGL T LA  L  V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 133 LISLAIGAVVVCLHAALRATED-ILGDLQDPFGDALLD--SPRGDYS 175
           ++S+ IG  +V LHA  R TED ++ D + P+G  L D   P G+Y+
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMDDQESPYGALLSDDQDPSGNYT 176

[Close]

BLAST of CmoCh14G018130 vs. TrEMBL
Match: A0A0D2NY05_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G246200 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.8e-34
Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           K   +S+ A R PWR+F D S + LPSS S+ATTR++QNLT F  NY L+LLL++ L LI
Sbjct: 9   KGTTQSLTALRRPWRDFFDISTVDLPSSTSDATTRIAQNLTHFRLNYTLILLLILFLSLI 68

Query: 73  YHPFSMIVLFLVFAAWFFLYFSRN--DPLRVFGFDLDD-LVLVIILGLT-TGLALAGVFV 132
           YHP S++   ++  AWFFLYF+R+  +P+ +FGF +DD +V+  + GLT  GL L GV+V
Sbjct: 69  YHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFFIDDRIVIAALFGLTVAGLVLTGVWV 128

Query: 133 NVLISLAIGAVVVCLHAALRATED-ILGDLQDPFGDAL------LDSPRGDYSG 176
           NVL++LA+G   V LHA LR+T+D ++ DL+ P+G  L      LDSPRGDYSG
Sbjct: 129 NVLVALAVGVGFVILHAGLRSTDDLVMDDLESPYGHVLAGGDDELDSPRGDYSG 182

[Close]

BLAST of CmoCh14G018130 vs. TrEMBL
Match: A0A067EJ32_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.0e-33
Identity = 90/175 (51.43%), Postives = 118/175 (67.43%), Query Frame = 1


Query: 8   FAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLV 67
           F    K   +S+ ATR PW +FLD SA +LP SLS+ATTR++QNLT F SNY ++ LL +
Sbjct: 11  FLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVITLLAL 70

Query: 68  LLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLV--IILGLTTGLALAG 127
            L LIYHP S+IV  L   AWFFLYF+R+DPL V GF +DD V++  +     TGL L  
Sbjct: 71  FLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGLVLTH 130

Query: 128 VFVNVLISLAIGAVVVCLHAALRATED-ILGDLQDPFG----DALLDSPRGDYSG 176
           V+VNVL+S+ +GAV+V LHA  R+T+D ++ D + PFG    D   DS RG Y+G
Sbjct: 131 VWVNVLVSVVVGAVLVILHAWFRSTDDLVMEDQESPFGVLLDDLGGDSARGSYTG 185

[Close]

BLAST of CmoCh14G018130 vs. TAIR10
Match: AT1G04260.1 (AT1G04260.1 CAMV movement protein interacting protein 7)

HSP 1 Score: 130.2 bits (326), Expect = 1.3e-30
Identity = 78/172 (45.35%), Postives = 113/172 (65.70%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           KE  +S+     PW +FLD SA S PSS+++ATTR++QNLT F  NY ++L +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 73  YHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDD-LVLVIILGLTTG-LALAGVFVNV 132
             P +++    V  AWFFLYF+R +PL +FGF +DD +V V+++GL+ G L   GV++  
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIGSLVTTGVWLRA 129

Query: 133 LISLAIGAVVVCLHAALRATEDILG-DLQDPFGDALL------DSPRGDYSG 176
           L ++  G +V+ LHAALR T+D++  DL+ P+G  L       D  RGDYSG
Sbjct: 130 LTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTSGGGNDGARGDYSG 181

[Close]

BLAST of CmoCh14G018130 vs. TAIR10
Match: AT1G08770.1 (AT1G08770.1 prenylated RAB acceptor 1.E)

HSP 1 Score: 109.0 bits (271), Expect = 3.0e-24
Identity = 70/164 (42.68%), Postives = 97/164 (59.15%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           K+  +S+I T  PWRE LD SALSLP     A   +  N++ F  NY L +L +V LGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 73  YHPFSMIVLFLVFAAWFFLYFSR--NDPLRVFGFDLDDLVLVIILGLTTGLAL--AGVFV 132
           YHP SMI   +VF  W  LYFSR  ND + + G ++DD +++++L L T LAL    V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 133 NVLISLAIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGD 173
           NVL+SL IG ++V  H A R T+D+  D +      L+ +  G+
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLDEESARRGGLVSAGSGN 200

[Close]

BLAST of CmoCh14G018130 vs. TAIR10
Match: AT1G17700.1 (AT1G17700.1 prenylated RAB acceptor 1.F1)

HSP 1 Score: 94.0 bits (232), Expect = 1.0e-19
Identity = 55/139 (39.57%), Postives = 88/139 (63.31%), Query Frame = 1


Query: 17  RSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLIYHPF 76
           RS +ATR PW++ LD  + + P  L+   TR+  N   F +NY +++L  V L LI++PF
Sbjct: 30  RSGLATRRPWKQMLDLGSFNFPRKLATVITRIRANTVYFQTNYTIVVLFSVFLSLIWNPF 89

Query: 77  SMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTT--GLALAGVFVNVLISL 136
           S++VL  +  AW FLYF R++PL VF  ++D  +++II+ + T   L L    +N+ +++
Sbjct: 90  SLLVLLALLGAWLFLYFLRDEPLTVFDREIDHRIVLIIMSVITLSILFLTDAKLNIAVAI 149

Query: 137 AIGAVVVCLHAALRATEDI 154
             GA+ V  HAA+R TED+
Sbjct: 150 VAGALAVLSHAAVRKTEDL 168

[Close]

BLAST of CmoCh14G018130 vs. TAIR10
Match: AT3G13720.1 (AT3G13720.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-19
Identity = 56/157 (35.67%), Postives = 93/157 (59.24%), Query Frame = 1


Query: 2   PMSAAEFAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCL 61
           P+   E     K   ++ +ATR  WR   D  ++ LP  +S+A TR+  NL  F  NY +
Sbjct: 15  PLVDVESLSRAKHRIKAGLATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAI 74

Query: 62  LLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTG- 121
           ++L+++   LI+HP S+IV  ++   W FLYF R++P+++F F +DD  ++I+L + T  
Sbjct: 75  VVLIVIFFSLIWHPTSLIVFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVV 134

Query: 122 -LALAGVFVNVLISLAIGAVVVCLHAALRATEDILGD 157
            L L     N++ +L  GAV+V +H+ +R TED+  D
Sbjct: 135 LLLLTNATFNIVGALVTGAVLVLIHSVVRKTEDLFLD 171

[Close]

BLAST of CmoCh14G018130 vs. TAIR10
Match: AT1G55190.1 (AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.1e-18
Identity = 59/157 (37.58%), Postives = 93/157 (59.24%), Query Frame = 1


Query: 2   PMSAAEFAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCL 61
           P    E+    K   +S +ATR PW+   D  +++LP    +A +R+  NL  F +NY +
Sbjct: 15  PAIDLEYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAI 74

Query: 62  LLLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTT-- 121
            +L ++ L L+YHP S+IVL ++   W FLYF R++PL VFG+ +DD  ++I L + T  
Sbjct: 75  GVLFILFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVV 134

Query: 122 GLALAGVFVNVLISLAIGAVVVCLHAALRATEDILGD 157
            L L     N+L SL   AV+V +HAA+R ++++  D
Sbjct: 135 MLLLTHATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]

BLAST of CmoCh14G018130 vs. NCBI nr
Match: gi|659076256|ref|XP_008438582.1| (PREDICTED: PRA1 family protein D [Cucumis melo])

HSP 1 Score: 283.1 bits (723), Expect = 3.3e-73
Identity = 151/175 (86.29%), Postives = 165/175 (94.29%), Query Frame = 1


Query: 3   MSAAEFAVTFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLL 62
           MS AEFAVTFKEAGRSVIATR PWREFLDPSALSLPSSLS+ATTR+S NLTRFLSNYCL+
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 63  LLLLVLLGLIYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLA 122
           +LLL+ LGLIYHPFSMIV  LVF AWFFLYFSR+DP+RVFGF+LDDLVL+IILGL TGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 123 LA--GVFVNVLISLAIGAVVVCLHAALRATEDILGDLQDPFGDALLDSPRGDYSG 176
           LA  GVFVNVLISLAIGAVVVCLHAALR+TED++GD+QDPFGDALL+SPRGDYSG
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPRGDYSG 175

[Close]

BLAST of CmoCh14G018130 vs. NCBI nr
Match: gi|590658846|ref|XP_007034966.1| (CAMV movement protein interacting protein 7, putative [Theobroma cacao])

HSP 1 Score: 157.5 bits (397), Expect = 2.1e-35
Identity = 92/176 (52.27%), Postives = 128/176 (72.73%), Query Frame = 1


Query: 11  TFKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLG 70
           + KE  +S+ A R PWREFLD +A+ LPSS S+ TTR++QNLT F  NY ++LLL++ L 
Sbjct: 7   SLKETAQSLTAIRRPWREFLDITAVDLPSSFSDVTTRIAQNLTHFRLNYTVILLLILFLS 66

Query: 71  LIYHPFSMIVLFLVFAAWFFLYFSRN--DPLRVFGFDLDD-LVLVIILGLT-TGLALAGV 130
           LIYHP S++   ++  AWFFLYF+R+  +P+ +FGF +D+ LV+  + GLT  GL L GV
Sbjct: 67  LIYHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFTIDERLVIAALFGLTVAGLVLTGV 126

Query: 131 FVNVLISLAIGAVVVCLHAALRATED-ILGDLQDPFGDAL------LDSPRGDYSG 176
           ++NVL ++AIGA +V LHAALR+T+D ++ DL+ P+G  L      LDSPRGDYSG
Sbjct: 127 WLNVLGAVAIGASMVILHAALRSTDDLVMDDLESPYGHVLAGGDEELDSPRGDYSG 182

[Close]

BLAST of CmoCh14G018130 vs. NCBI nr
Match: gi|470104050|ref|XP_004288430.1| (PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 155.6 bits (392), Expect = 8.0e-35
Identity = 89/168 (52.98%), Postives = 119/168 (70.83%), Query Frame = 1


Query: 12  FKEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGL 71
           FKEAG+S +A   PW EF D SALSLP + S+ATTR+ QN T F SNY +L+L+++ L L
Sbjct: 9   FKEAGQSAMAAHRPWSEFSDLSALSLPQNFSDATTRLFQNSTHFRSNYAMLVLVVLFLSL 68

Query: 72  IYHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTT--GLALAGVFVN 131
           +YHP S+IV  LVFAAW F YFSR+D + VFGF + D V++ +LGL T   L L  V++N
Sbjct: 69  LYHPVSLIVFLLVFAAWVFFYFSRDDDVSVFGFVVGDRVVMAVLGLVTVVALVLTNVWLN 128

Query: 132 VLISLAIGAVVVCLHAALRATED-ILGDLQDPFGDALLD--SPRGDYS 175
           V++S  +GAVVVC+HA  R TED ++ D + P+G  L D   PRG+Y+
Sbjct: 129 VVVSGVVGAVVVCVHAVFRGTEDLVMEDKESPYGALLSDDPDPRGNYT 176

[Close]

BLAST of CmoCh14G018130 vs. NCBI nr
Match: gi|596194906|ref|XP_007223565.1| (hypothetical protein PRUPE_ppa012254mg [Prunus persica])

HSP 1 Score: 154.5 bits (389), Expect = 1.8e-34
Identity = 89/167 (53.29%), Postives = 119/167 (71.26%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           KE  +S IAT  PW E L+P+ALSLPS+LS  TTR++QNLT F SNY L+LL+++ L LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 73  YHPFSMIVLFLVFAAWFFLYFSRNDPLRVFGFDLDDLVLVIILGLTTGLA--LAGVFVNV 132
           YHP S+IV  ++FAAW  LYFSR+ PL VFGF + D V+++ILGL T LA  L  V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 133 LISLAIGAVVVCLHAALRATED-ILGDLQDPFGDALLD--SPRGDYS 175
           ++S+ IG  +V LHA  R TED ++ D + P+G  L D   P G+Y+
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMDDQESPYGALLSDDQDPSGNYT 176

[Close]

BLAST of CmoCh14G018130 vs. NCBI nr
Match: gi|823178741|ref|XP_012487242.1| (PREDICTED: PRA1 family protein D-like [Gossypium raimondii])

HSP 1 Score: 153.3 bits (386), Expect = 4.0e-34
Identity = 90/174 (51.72%), Postives = 123/174 (70.69%), Query Frame = 1


Query: 13  KEAGRSVIATRSPWREFLDPSALSLPSSLSNATTRMSQNLTRFLSNYCLLLLLLVLLGLI 72
           K   +S+ A R PWR+F D S + LPSS S+ATTR++QNLT F  NY L+LLL++ L LI
Sbjct: 9   KGTTQSLTALRRPWRDFFDISTVDLPSSTSDATTRIAQNLTHFRLNYTLILLLILFLSLI 68

Query: 73  YHPFSMIVLFLVFAAWFFLYFSRN--DPLRVFGFDLDD-LVLVIILGLT-TGLALAGVFV 132
           YHP S++   ++  AWFFLYF+R+  +P+ +FGF +DD +V+  + GLT  GL L GV+V
Sbjct: 69  YHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFFIDDRIVIAALFGLTVAGLVLTGVWV 128

Query: 133 NVLISLAIGAVVVCLHAALRATED-ILGDLQDPFGDAL------LDSPRGDYSG 176
           NVL++LA+G   V LHA LR+T+D ++ DL+ P+G  L      LDSPRGDYSG
Sbjct: 129 NVLVALAVGVGFVILHAGLRSTDDLVMDDLESPYGHVLAGGDDELDSPRGDYSG 182

The following BLAST results are available for this feature:

BLAST of CmoCh14G018130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRA1D_ARATH	2.2e-29	45.35	PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1	[more]
PRA1E_ARATH	5.4e-23	42.68	PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1	[more]
PR1F1_ARATH	1.8e-18	39.57	PRA1 family protein F1 OS=Arabidopsis thaliana GN=PRA1F1 PE=1 SV=1	[more]
PR1F3_ARATH	4.0e-18	35.67	PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1	[more]
PR1F2_ARATH	2.0e-17	37.58	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	[more]

BLAST of CmoCh14G018130 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7A7_CUCSA	2.3e-73	86.29	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1	[more]
A0A061ENE3_THECC	1.5e-35	52.27	CAMV movement protein interacting protein 7, putative OS=Theobroma cacao GN=TCM_...	[more]
M5XFQ2_PRUPE	1.2e-34	53.29	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1	[more]
A0A0D2NY05_GOSRA	2.8e-34	51.72	Uncharacterized protein OS=Gossypium raimondii GN=B456_006G246200 PE=4 SV=1	[more]
A0A067EJ32_CITSI	4.0e-33	51.43	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1	[more]

BLAST of CmoCh14G018130 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04260.1	1.3e-30	45.35	CAMV movement protein interacting protein 7	[more]
AT1G08770.1	3.0e-24	42.68	prenylated RAB acceptor 1.E	[more]
AT1G17700.1	1.0e-19	39.57	prenylated RAB acceptor 1.F1	[more]
AT3G13720.1	2.2e-19	35.67	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	1.1e-18	37.58	PRA1 (Prenylated rab acceptor) family protein	[more]

BLAST of CmoCh14G018130 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076256\|ref\|XP_008438582.1\|	3.3e-73	86.29	PREDICTED: PRA1 family protein D [Cucumis melo]	[more]
gi\|590658846\|ref\|XP_007034966.1\|	2.1e-35	52.27	CAMV movement protein interacting protein 7, putative [Theobroma cacao]	[more]
gi\|470104050\|ref\|XP_004288430.1\|	8.0e-35	52.98	PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca]	[more]
gi\|596194906\|ref\|XP_007223565.1\|	1.8e-34	53.29	hypothetical protein PRUPE_ppa012254mg [Prunus persica]	[more]
gi\|823178741\|ref\|XP_012487242.1\|	4.0e-34	51.72	PREDICTED: PRA1 family protein D-like [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0044765	single-organism transport
biological_process	GO:0016192	vesicle-mediated transport
biological_process	GO:0008150	biological_process
biological_process	GO:0006144	purine nucleobase metabolic process
biological_process	GO:0006206	pyrimidine nucleobase metabolic process
biological_process	GO:0006351	transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005730	nucleolus
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0003899	DNA-directed RNA polymerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh14G018130.1	CmoCh14G018130.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 20..152 score: 2.7
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..175 score: 1.7
None	No IPR available	PANTHER	PTHR19317:SF7	PRA1 FAMILY PROTEIN D	coord: 1..175 score: 1.7

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh14G018130	Cucsa.254890	Cucumber (Gy14) v1	cgycmoB0700
CmoCh14G018130	CmaCh14G017760	Cucurbita maxima (Rimu)	cmacmoB245
CmoCh14G018130	CmaCh06G013430	Cucurbita maxima (Rimu)	cmacmoB797
CmoCh14G018130	Cla021568	Watermelon (97103) v1	cmowmB231
CmoCh14G018130	Csa3G143550	Cucumber (Chinese Long) v2	cmocuB239
CmoCh14G018130	MELO3C006474	Melon (DHL92) v3.5.1	cmomeB230
CmoCh14G018130	CSPI03G12510	Wild cucumber (PI 183967)	cmocpiB243
CmoCh14G018130	Lsi05G016670	Bottle gourd (USVL1VR-Ls)	cmolsiB233
CmoCh14G018130	Cp4.1LG03g10250	Cucurbita pepo (Zucchini)	cmocpeB245
CmoCh14G018130	Cp4.1LG08g03750	Cucurbita pepo (Zucchini)	cmocpeB254
CmoCh14G018130	MELO3C006474.2	Melon (DHL92) v3.6.1	cmomedB260
CmoCh14G018130	CsaV3_2G013680	Cucumber (Chinese Long) v3	cmocucB0268
CmoCh14G018130	CsaV3_3G012630	Cucumber (Chinese Long) v3	cmocucB0283
CmoCh14G018130	CsaV3_2G004000	Cucumber (Chinese Long) v3	cmocucB0269
CmoCh14G018130	Cla97C05G085680	Watermelon (97103) v2	cmowmbB243
CmoCh14G018130	BhiUN393G9	Wax gourd	cmowgoB0334
CmoCh14G018130	CsGy3G012650	Cucumber (Gy14) v2	cgybcmoB290
CmoCh14G018130	Carg06194	Silver-seed gourd	carcmoB1284
CmoCh14G018130	Carg08987	Silver-seed gourd	carcmoB1049
CmoCh14G018130	Carg16589	Silver-seed gourd	carcmoB0328

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh14G018130	CmoCh06G013540	Cucurbita moschata (Rifu)	cmocmoB224

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh14G018130	Watermelon (97103) v2	cmowmbB246
CmoCh14G018130	Watermelon (97103) v2	cmowmbB253
CmoCh14G018130	Wax gourd	cmowgoB0333
CmoCh14G018130	Cucurbita moschata (Rifu)	cmocmoB198
CmoCh14G018130	Cucurbita moschata (Rifu)	cmocmoB213
CmoCh14G018130	Cucurbita moschata (Rifu)	cmocmoB233
CmoCh14G018130	Cucurbita maxima (Rimu)	cmacmoB012
CmoCh14G018130	Cucurbita maxima (Rimu)	cmacmoB350
CmoCh14G018130	Cucurbita maxima (Rimu)	cmacmoB883
CmoCh14G018130	Wild cucumber (PI 183967)	cmocpiB228
CmoCh14G018130	Cucumber (Chinese Long) v2	cmocuB225
CmoCh14G018130	Melon (DHL92) v3.5.1	cmomeB221
CmoCh14G018130	Watermelon (Charleston Gray)	cmowcgB219
CmoCh14G018130	Watermelon (Charleston Gray)	cmowcgB221
CmoCh14G018130	Watermelon (Charleston Gray)	cmowcgB227
CmoCh14G018130	Watermelon (97103) v1	cmowmB223
CmoCh14G018130	Watermelon (97103) v1	cmowmB239
CmoCh14G018130	Cucurbita pepo (Zucchini)	cmocpeB223
CmoCh14G018130	Cucurbita pepo (Zucchini)	cmocpeB230
CmoCh14G018130	Bottle gourd (USVL1VR-Ls)	cmolsiB213
CmoCh14G018130	Bottle gourd (USVL1VR-Ls)	cmolsiB235
CmoCh14G018130	Cucumber (Gy14) v2	cgybcmoB181
CmoCh14G018130	Melon (DHL92) v3.6.1	cmomedB250
CmoCh14G018130	Silver-seed gourd	carcmoB0319
CmoCh14G018130	Cucumber (Chinese Long) v3	cmocucB0267