CmaCh06G013430 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh06G013430
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	PRA1 (Prenylated rab acceptor) family protein
Location	Cma_Chr06 : 8810148 .. 8810621 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACCGCTGAATTCGCCGTCACGTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGGCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCCTCTTGCTTCTCATCTTTCTTGGCCTCATCTACCATCCGTTTTCCATGATTGTCTTCTTCCTTGTGTTTGTTGCCTGGTACGTCCTTTACTTCTCCCGCGACGACCCACTTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCGTGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGTTCTTGGGGATTTATAA

mRNA sequence

ATGTCGACCGCTGAATTCGCCGTCACGTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGGCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCCTCTTGCTTCTCATCTTTCTTGGCCTCATCTACCATCCGTTTTCCATGATTGTCTTCTTCCTTGTGTTTGTTGCCTGGTACGTCCTTTACTTCTCCCGCGACGACCCACTTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCGTGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGTTCTTGGGGATTTATAA

Coding sequence (CDS)

ATGTCGACCGCTGAATTCGCCGTCACGTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGGCTCTCAGCCTTCCTTCTTCCCTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTTGTCCTCTTGCTTCTCATCTTTCTTGGCCTCATCTACCATCCGTTTTCCATGATTGTCTTCTTCCTTGTGTTTGTTGCCTGGTACGTCCTTTACTTCTCCCGCGACGACCCACTTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGGGCCGTGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGTTCTTGGGGATTTATAA

Protein sequence

MSTAEFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAVVVCLHAALKGTEDVLGDL

Homology

[Close]

BLAST of CmaCh06G013430 vs. Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 5.5e-27
Identity = 66/147 (44.90%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           KE  +S+    RPW +FLD  A S PSS++DAT+R++QNLT F  NY ++L +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGD-FVLVIILGLATGLALALTGVFVN 130
             P +++ F  V +AW+ LYF+R++PL +FGF + D  V V+++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 131 VLISLAIGAVVVCLHAALKGTEDVLGD 157
            L ++  G +V+ LHAAL+GT+D++ D
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSD 155

[Close]

BLAST of CmaCh06G013430 vs. Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 9.3e-27
Identity = 69/148 (46.62%), Postives = 97/148 (65.54%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           K+  +S+I T RPWRE LD  ALSLP    +A + +  N++ F  NY L +L ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRD--DPLRVFGFELGDFVLVIILGLATGLALALTGVFV 130
           YHP SMI F +VF+ W +LYFSRD  D + + G E+ D +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 131 NVLISLAIGAVVVCLHAALKGTEDVLGD 157
           NVL+SL IG ++V  H A + T+D+  D
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLD 184

[Close]

BLAST of CmaCh06G013430 vs. Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 3.1e-22
Identity = 59/139 (42.45%), Postives = 92/139 (66.19%), Query Frame = 1


Query: 18  IATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLIYHPFSMI 77
           +ATRR WR   D  ++ LP  +SDA +RI  NL  F  NY +V+L++IF  LI+HP S+I
Sbjct: 33  LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 92

Query: 78  VFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIG 137
           VF ++ V W  LYF RD+P+++F F++ D  ++I+L + T + L LT    N++ +L  G
Sbjct: 93  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 152

Query: 138 AVVVCLHAALKGTEDVLGD 157
           AV+V +H+ ++ TED+  D
Sbjct: 153 AVLVLIHSVVRKTEDLFLD 171

[Close]

BLAST of CmaCh06G013430 vs. Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 4.5e-21
Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 1


Query: 5   EFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLL 64
           E+    K   +S +ATRRPW+   D  +++LP    DA SRI  NL  F +NY + +L +
Sbjct: 20  EYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFI 79

Query: 65  IFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALT 124
           +FL L+YHP S+IV  ++ V W  LYF RD+PL VFG+++ D  ++I L + T + L LT
Sbjct: 80  LFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139

Query: 125 GVFVNVLISLAIGAVVVCLHAALKGTEDVLGD 157
               N+L SL   AV+V +HAA++ ++++  D
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]

BLAST of CmaCh06G013430 vs. Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.2e-20
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           K+  +  +ATRR WR   D  +  LP  +SD  SRI  NL  F SNY +V+L +IF  LI
Sbjct: 26  KQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLI 85

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           +HP S+IVF  +   W  LYF RD PL+VF F++ D  ++I L + T + L LT    N+
Sbjct: 86  WHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNI 145

Query: 131 LISLAIGAVVVCLHAALKGTEDVLGD 157
           + +L  GAV+V +HA ++ T+D+  D
Sbjct: 146 VAALMAGAVLVLIHAVIRKTDDLFLD 171

[Close]

BLAST of CmaCh06G013430 vs. TrEMBL
Match: A0A0A0L7A7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 2.9e-67
Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 1


Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLV 60
           MSTAEFAVTFKEAGRSVIATRRPWREFLDP ALSLPSSLSDAT+RIS NLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 61  LLLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLA 120
           +LLLIFLGLIYHPFSMIVF LVFVAW+ LYFSRDDP+RVFGFEL D VL+IILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALKGTEDVLGDL 158
           LALTGVFVNVLISLAIGAVVVCLHAAL+ TED++GD+
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDM 157

[Close]

BLAST of CmaCh06G013430 vs. TrEMBL
Match: M5XFQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 7.4e-39
Identity = 89/146 (60.96%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           KE  +S IAT RPW E L+P ALSLPS+LS+ T+R++QNLT F SNY LVLL+++FL LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           YHP S+IVF ++F AW VLYFSRD PL VFGF +GD V+++ILGL T LAL LT V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 131 LISLAIGAVVVCLHAALKGTEDVLGD 157
           ++S+ IG  +V LHA  +GTED++ D
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMD 155

[Close]

BLAST of CmaCh06G013430 vs. TrEMBL
Match: A0A067KVX9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02275 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.3e-32
Identity = 77/157 (49.04%), Postives = 118/157 (75.16%), Query Frame = 1


Query: 1   MSTA-EFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCL 60
           M+TA +F   FK+  +S+ A  RPW  FLD  +L+LPSS+ DAT+RI+QNLT F SNY L
Sbjct: 1   MTTAPQFLSGFKQTAQSLNAGLRPWSVFLDLTSLNLPSSIPDATTRITQNLTHFRSNYSL 60

Query: 61  VLLLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGL 120
           ++L+++FL L YHP S+I F + F+AW  LYFSR++PL +FG+++ D V++++L +AT L
Sbjct: 61  IILIVLFLSLFYHPLSLIAFLITFIAWVFLYFSRNEPLIIFGYQVNDLVVLVLLFVATIL 120

Query: 121 ALALTGVFVNVLISLAIGAVVVCLHAALKGTEDVLGD 157
            L  +GV++N+L+++ IG V+V LHA L+ T+D++ D
Sbjct: 121 VLIWSGVWLNLLVAVVIGVVLVVLHAVLRSTDDLVAD 157

[Close]

BLAST of CmaCh06G013430 vs. TrEMBL
Match: V4S3I0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005568mg PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.9e-32
Identity = 83/155 (53.55%), Postives = 108/155 (69.68%), Query Frame = 1


Query: 2   STAEFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVL 61
           S   F    K   +S+ ATRRPW +FLD  A +LP SLSDAT+RI+QNLT F SNY ++ 
Sbjct: 7   SDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVIT 66

Query: 62  LLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLAL 121
           LL +FL LIYHP S+IVF L  VAW+ LYF+RDDPL V GF++ D V++  L   T   L
Sbjct: 67  LLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGL 126

Query: 122 ALTGVFVNVLISLAIGAVVVCLHAALKGTEDVLGD 157
            LT V+VNVL+S+ +GAV+V LHA  + T+D++ D
Sbjct: 127 VLTHVWVNVLVSVVVGAVLVILHAWFRSTDDLVMD 161

[Close]

BLAST of CmaCh06G013430 vs. TrEMBL
Match: A0A067EJ32_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 1.1e-31
Identity = 82/153 (53.59%), Postives = 107/153 (69.93%), Query Frame = 1


Query: 2   STAEFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVL 61
           S   F    K   +S+ ATRRPW +FLD  A +LP SLSDAT+RI+QNLT F SNY ++ 
Sbjct: 7   SDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVIT 66

Query: 62  LLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLAL 121
           LL +FL LIYHP S+IVF L  VAW+ LYF+RDDPL V GF++ D V++  L   T   L
Sbjct: 67  LLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGL 126

Query: 122 ALTGVFVNVLISLAIGAVVVCLHAALKGTEDVL 155
            LT V+VNVL+S+ +GAV+V LHA  + T+D++
Sbjct: 127 VLTHVWVNVLVSVVVGAVLVILHAWFRSTDDLV 159

[Close]

BLAST of CmaCh06G013430 vs. TAIR10
Match: AT1G04260.1 (AT1G04260.1 CAMV movement protein interacting protein 7)

HSP 1 Score: 122.1 bits (305), Expect = 3.1e-28
Identity = 66/147 (44.90%), Postives = 103/147 (70.07%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           KE  +S+    RPW +FLD  A S PSS++DAT+R++QNLT F  NY ++L +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGD-FVLVIILGLATGLALALTGVFVN 130
             P +++ F  V +AW+ LYF+R++PL +FGF + D  V V+++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 131 VLISLAIGAVVVCLHAALKGTEDVLGD 157
            L ++  G +V+ LHAAL+GT+D++ D
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSD 155

[Close]

BLAST of CmaCh06G013430 vs. TAIR10
Match: AT1G08770.1 (AT1G08770.1 prenylated RAB acceptor 1.E)

HSP 1 Score: 121.3 bits (303), Expect = 5.2e-28
Identity = 69/148 (46.62%), Postives = 97/148 (65.54%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           K+  +S+I T RPWRE LD  ALSLP    +A + +  N++ F  NY L +L ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRD--DPLRVFGFELGDFVLVIILGLATGLALALTGVFV 130
           YHP SMI F +VF+ W +LYFSRD  D + + G E+ D +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 131 NVLISLAIGAVVVCLHAALKGTEDVLGD 157
           NVL+SL IG ++V  H A + T+D+  D
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLD 184

[Close]

BLAST of CmaCh06G013430 vs. TAIR10
Match: AT3G13720.1 (AT3G13720.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.7e-23
Identity = 59/139 (42.45%), Postives = 92/139 (66.19%), Query Frame = 1


Query: 18  IATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLIYHPFSMI 77
           +ATRR WR   D  ++ LP  +SDA +RI  NL  F  NY +V+L++IF  LI+HP S+I
Sbjct: 33  LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 92

Query: 78  VFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIG 137
           VF ++ V W  LYF RD+P+++F F++ D  ++I+L + T + L LT    N++ +L  G
Sbjct: 93  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 152

Query: 138 AVVVCLHAALKGTEDVLGD 157
           AV+V +H+ ++ TED+  D
Sbjct: 153 AVLVLIHSVVRKTEDLFLD 171

[Close]

BLAST of CmaCh06G013430 vs. TAIR10
Match: AT1G55190.1 (AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 102.4 bits (254), Expect = 2.5e-22
Identity = 62/152 (40.79%), Postives = 95/152 (62.50%), Query Frame = 1


Query: 5   EFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLL 64
           E+    K   +S +ATRRPW+   D  +++LP    DA SRI  NL  F +NY + +L +
Sbjct: 20  EYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFI 79

Query: 65  IFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALT 124
           +FL L+YHP S+IV  ++ V W  LYF RD+PL VFG+++ D  ++I L + T + L LT
Sbjct: 80  LFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139

Query: 125 GVFVNVLISLAIGAVVVCLHAALKGTEDVLGD 157
               N+L SL   AV+V +HAA++ ++++  D
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]

BLAST of CmaCh06G013430 vs. TAIR10
Match: AT3G13710.1 (AT3G13710.1 prenylated RAB acceptor 1.F4)

HSP 1 Score: 100.1 bits (248), Expect = 1.3e-21
Identity = 62/146 (42.47%), Postives = 89/146 (60.96%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           K+  +  +ATRR WR   D  +  LP  +SD  SRI  NL  F SNY +V+L +IF  LI
Sbjct: 26  KQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLI 85

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           +HP S+IVF  +   W  LYF RD PL+VF F++ D  ++I L + T + L LT    N+
Sbjct: 86  WHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNI 145

Query: 131 LISLAIGAVVVCLHAALKGTEDVLGD 157
           + +L  GAV+V +HA ++ T+D+  D
Sbjct: 146 VAALMAGAVLVLIHAVIRKTDDLFLD 171

[Close]

BLAST of CmaCh06G013430 vs. NCBI nr
Match: gi|659076256|ref|XP_008438582.1| (PREDICTED: PRA1 family protein D [Cucumis melo])

HSP 1 Score: 262.7 bits (670), Expect = 4.1e-67
Identity = 141/157 (89.81%), Postives = 150/157 (95.54%), Query Frame = 1


Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLV 60
           MSTAEFAVTFKEAGRSVIATRRPWREFLDP ALSLPSSLSDAT+RIS NLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 61  LLLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLA 120
           +LLLIFLGLIYHPFSMIVF LVFVAW+ LYFSRDDP+RVFGFEL D VL+IILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALKGTEDVLGDL 158
           LALTGVFVNVLISLAIGAVVVCLHAAL+ TED++GD+
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDM 157

[Close]

BLAST of CmaCh06G013430 vs. NCBI nr
Match: gi|596194906|ref|XP_007223565.1| (hypothetical protein PRUPE_ppa012254mg [Prunus persica])

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-38
Identity = 89/146 (60.96%), Postives = 115/146 (78.77%), Query Frame = 1


Query: 11  KEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGLI 70
           KE  +S IAT RPW E L+P ALSLPS+LS+ T+R++QNLT F SNY LVLL+++FL LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 71  YHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           YHP S+IVF ++F AW VLYFSRD PL VFGF +GD V+++ILGL T LAL LT V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 131 LISLAIGAVVVCLHAALKGTEDVLGD 157
           ++S+ IG  +V LHA  +GTED++ D
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMD 155

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BLAST of CmaCh06G013430 vs. NCBI nr
Match: gi|658062596|ref|XP_008367200.1| (PREDICTED: PRA1 family protein D-like [Malus domestica])

HSP 1 Score: 161.8 bits (408), Expect = 9.9e-37
Identity = 86/147 (58.50%), Postives = 114/147 (77.55%), Query Frame = 1


Query: 10  FKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGL 69
           FKEA ++  AT RPW E L+P ALSLPS LSDAT+R++QNLT F SNY L+ L+++FL L
Sbjct: 9   FKEATQTARATLRPWGELLEPTALSLPSGLSDATTRLAQNLTHFRSNYALIALIVLFLSL 68

Query: 70  IYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVN 129
           +YHPFS+IVF +VF AW VLYFSRD PL VFGF + D V++++L + T +AL LT V+VN
Sbjct: 69  LYHPFSIIVFLIVFAAWLVLYFSRDQPLEVFGFVVPDRVVMVVLAVVTVVALVLTHVWVN 128

Query: 130 VLISLAIGAVVVCLHAALKGTEDVLGD 157
           V++S  IG V++ LHA  +GTED++ D
Sbjct: 129 VVVSGVIGVVLIGLHAVFRGTEDLVMD 155

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BLAST of CmaCh06G013430 vs. NCBI nr
Match: gi|470104050|ref|XP_004288430.1| (PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 158.7 bits (400), Expect = 8.4e-36
Identity = 86/154 (55.84%), Postives = 114/154 (74.03%), Query Frame = 1


Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLV 60
           MST      FKEAG+S +A  RPW EF D  ALSLP + SDAT+R+ QN T F SNY ++
Sbjct: 1   MSTG-IVTRFKEAGQSAMAAHRPWSEFSDLSALSLPQNFSDATTRLFQNSTHFRSNYAML 60

Query: 61  LLLLIFLGLIYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLA 120
           +L+++FL L+YHP S+IVF LVF AW   YFSRDD + VFGF +GD V++ +LGL T +A
Sbjct: 61  VLVVLFLSLLYHPVSLIVFLLVFAAWVFFYFSRDDDVSVFGFVVGDRVVMAVLGLVTVVA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALKGTEDVL 155
           L LT V++NV++S  +GAVVVC+HA  +GTED++
Sbjct: 121 LVLTNVWLNVVVSGVVGAVVVCVHAVFRGTEDLV 153

[Close]

BLAST of CmaCh06G013430 vs. NCBI nr
Match: gi|658011606|ref|XP_008341051.1| (PREDICTED: PRA1 family protein D-like [Malus domestica])

HSP 1 Score: 156.4 bits (394), Expect = 4.2e-35
Identity = 84/147 (57.14%), Postives = 112/147 (76.19%), Query Frame = 1


Query: 10  FKEAGRSVIATRRPWREFLDPLALSLPSSLSDATSRISQNLTRFLSNYCLVLLLLIFLGL 69
           FKEA +S  AT RPW E L+P AL LPS+LS AT+R++QNLT F SNY L+ L+++FL L
Sbjct: 9   FKEATQSARATLRPWGELLEPTALRLPSNLSAATTRLAQNLTHFRSNYALIALIVLFLSL 68

Query: 70  IYHPFSMIVFFLVFVAWYVLYFSRDDPLRVFGFELGDFVLVIILGLATGLALALTGVFVN 129
           +YHPFS+IVF +VF AW VLYFSRD PL VFGF + D V++++L L T +AL LT V++N
Sbjct: 69  LYHPFSIIVFLIVFAAWLVLYFSRDQPLEVFGFAVPDRVVMVVLALVTVVALVLTHVWLN 128

Query: 130 VLISLAIGAVVVCLHAALKGTEDVLGD 157
           V++S  IG V++ LHA  +GTE ++ D
Sbjct: 129 VIVSGVIGVVLIGLHAVFRGTEGLVMD 155

The following BLAST results are available for this feature:

BLAST of CmaCh06G013430 vs. Swiss-Prot


Match Name	E-value	Identity	Description
PRA1D_ARATH	5.5e-27	44.90	PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1	[more]
PRA1E_ARATH	9.3e-27	46.62	PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1	[more]
PR1F3_ARATH	3.1e-22	42.45	PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1	[more]
PR1F2_ARATH	4.5e-21	40.79	PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1	[more]
PR1F4_ARATH	2.2e-20	42.47	PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1	[more]

BLAST of CmaCh06G013430 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L7A7_CUCSA	2.9e-67	89.81	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1	[more]
M5XFQ2_PRUPE	7.4e-39	60.96	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1	[more]
A0A067KVX9_JATCU	1.3e-32	49.04	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02275 PE=4 SV=1	[more]
V4S3I0_9ROSI	3.9e-32	53.55	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005568mg PE=4 SV=1	[more]
A0A067EJ32_CITSI	1.1e-31	53.59	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1	[more]

BLAST of CmaCh06G013430 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04260.1	3.1e-28	44.90	CAMV movement protein interacting protein 7	[more]
AT1G08770.1	5.2e-28	46.62	prenylated RAB acceptor 1.E	[more]
AT3G13720.1	1.7e-23	42.45	PRA1 (Prenylated rab acceptor) family protein	[more]
AT1G55190.1	2.5e-22	40.79	PRA1 (Prenylated rab acceptor) family protein	[more]
AT3G13710.1	1.3e-21	42.47	prenylated RAB acceptor 1.F4	[more]

BLAST of CmaCh06G013430 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659076256\|ref\|XP_008438582.1\|	4.1e-67	89.81	PREDICTED: PRA1 family protein D [Cucumis melo]	[more]
gi\|596194906\|ref\|XP_007223565.1\|	1.1e-38	60.96	hypothetical protein PRUPE_ppa012254mg [Prunus persica]	[more]
gi\|658062596\|ref\|XP_008367200.1\|	9.9e-37	58.50	PREDICTED: PRA1 family protein D-like [Malus domestica]	[more]
gi\|470104050\|ref\|XP_004288430.1\|	8.4e-36	55.84	PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca]	[more]
gi\|658011606\|ref\|XP_008341051.1\|	4.2e-35	57.14	PREDICTED: PRA1 family protein D-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR004895	Prenylated_rab_accept_PRA1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0044765	single-organism transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh06G013430.1	CmaCh06G013430.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004895	Prenylated rab acceptor PRA1	PFAM	PF03208	PRA1	coord: 18..152 score: 2.5
None	No IPR available	PANTHER	PTHR19317	PRENYLATED RAB ACCEPTOR 1-RELATED	coord: 1..156 score: 6.4
None	No IPR available	PANTHER	PTHR19317:SF7	PRA1 FAMILY PROTEIN D	coord: 1..156 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh06G013430	Cucsa.254890	Cucumber (Gy14) v1	cgycmaB0727
CmaCh06G013430	Cla021568	Watermelon (97103) v1	cmawmB798
CmaCh06G013430	Csa3G143550	Cucumber (Chinese Long) v2	cmacuB814
CmaCh06G013430	MELO3C006474	Melon (DHL92) v3.5.1	cmameB763
CmaCh06G013430	CSPI03G12510	Wild cucumber (PI 183967)	cmacpiB826
CmaCh06G013430	CmoCh02G018160	Cucurbita moschata (Rifu)	cmacmoB819
CmaCh06G013430	CmoCh06G013540	Cucurbita moschata (Rifu)	cmacmoB829
CmaCh06G013430	CmoCh14G018130	Cucurbita moschata (Rifu)	cmacmoB797
CmaCh06G013430	Lsi05G016670	Bottle gourd (USVL1VR-Ls)	cmalsiB764
CmaCh06G013430	Lsi05G009740	Bottle gourd (USVL1VR-Ls)	cmalsiB771
CmaCh06G013430	Cp4.1LG08g03750	Cucurbita pepo (Zucchini)	cmacpeB853
CmaCh06G013430	Cp4.1LG05g01280	Cucurbita pepo (Zucchini)	cmacpeB843
CmaCh06G013430	MELO3C006474.2	Melon (DHL92) v3.6.1	cmamedB863
CmaCh06G013430	CsaV3_3G012630	Cucumber (Chinese Long) v3	cmacucB0965
CmaCh06G013430	Cla97C05G085680	Watermelon (97103) v2	cmawmbB856
CmaCh06G013430	Cla97C07G128940	Watermelon (97103) v2	cmawmbB871
CmaCh06G013430	BhiUN393G9	Wax gourd	cmawgoB1027
CmaCh06G013430	Bhi05G000197	Wax gourd	cmawgoB1026
CmaCh06G013430	CsGy3G012650	Cucumber (Gy14) v2	cgybcmaB427
CmaCh06G013430	Carg08987	Silver-seed gourd	carcmaB1086

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmaCh06G013430	CmaCh14G017760	Cucurbita maxima (Rimu)	cmacmaB284

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh06G013430	Cucurbita pepo (Zucchini)	cmacpeB837
CmaCh06G013430	Cucurbita pepo (Zucchini)	cmacpeB810
CmaCh06G013430	Cucurbita pepo (Zucchini)	cmacpeB824
CmaCh06G013430	Bottle gourd (USVL1VR-Ls)	cmalsiB741
CmaCh06G013430	Cucumber (Gy14) v2	cgybcmaB262
CmaCh06G013430	Melon (DHL92) v3.6.1	cmamedB860
CmaCh06G013430	Silver-seed gourd	carcmaB0316
CmaCh06G013430	Silver-seed gourd	carcmaB0329
CmaCh06G013430	Silver-seed gourd	carcmaB1325
CmaCh06G013430	Cucumber (Chinese Long) v3	cmacucB0964
CmaCh06G013430	Watermelon (97103) v2	cmawmbB865
CmaCh06G013430	Watermelon (97103) v2	cmawmbB873
CmaCh06G013430	Wax gourd	cmawgoB1006
CmaCh06G013430	Cucurbita maxima (Rimu)	cmacmaB369
CmaCh06G013430	Cucurbita maxima (Rimu)	cmacmaB502
CmaCh06G013430	Cucurbita maxima (Rimu)	cmacmaB554
CmaCh06G013430	Cucurbita moschata (Rifu)	cmacmoB809
CmaCh06G013430	Cucurbita moschata (Rifu)	cmacmoB837
CmaCh06G013430	Wild cucumber (PI 183967)	cmacpiB825
CmaCh06G013430	Cucumber (Chinese Long) v2	cmacuB813
CmaCh06G013430	Melon (DHL92) v3.5.1	cmameB760
CmaCh06G013430	Watermelon (Charleston Gray)	cmawcgB717
CmaCh06G013430	Watermelon (Charleston Gray)	cmawcgB737
CmaCh06G013430	Watermelon (Charleston Gray)	cmawcgB745
CmaCh06G013430	Watermelon (97103) v1	cmawmB778
CmaCh06G013430	Watermelon (97103) v1	cmawmB811