Cp4.1LG08g03750 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG08g03750
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPRA1 (Prenylated rab acceptor) family protein
LocationCp4.1LG08 : 1968073 .. 1970274 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCTTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTGGTCGTCTTGCTTCTCATCTTTCTTGGCCTCATCTACCATCCGTTTTCCATGATTGTGTTCTTCCTTGTCTTTGTTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGAGCCGTGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTTGCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGGTGATTACAGCGGCATCTGATTGAATATGTGAGTTTGTTGAATTACTGTTCTTCTTTTCAATTGATTTAGCTAAAGAAATTTGACTGTTTGCTGGTTTATATACTGATATTTGTTAGATGAAATGTACATTGCAGAACACAATGAATTGCAGAAAAGTATTCATTTCCATTATGCTCTGAATTTTGCTCATTATTGTTCCTTTTACTTTTAGCTTGTGTTTCTGAGTTTGATCTGTTGATTACTGGGATGTTATCGTTGTTGTATGTTTCCCTTTGAATTTGCATAAACTAAATTAGTCACTGAATTGGATTCTTGTTGAATATATTATTCTTTGAGTATCATTATAGGATGACAACTTTATAGACCATTAGATAGAACCTTCACAAAATTCTCTTGGCTTAGCTGCCCACAGATATCTGTATTCGTTCTGTGGCTGTTTGTTGCCACAGTTCTGCGATGTCGTGCAGATGCGTCACTGGCTGACCGACCCTTCGATGGTATACTGCCATGTCTGTAGTTCGTAATTTAGTAGAAATATGCAAGAAAAGGGCAGGGTAGGAGGATGTTAGGAATCACGAACCTCCATGATATGATATTGTCTATTTTGAGCATAACCTCTCATGACTTTGCTCTAAAGTTCCCAAAATGTCTCACTTCCTCCCAACAATCCTCGACACAGGACAGGTGGGGAAGTTGCTTATTATCAAATGGTCTACTATTACTTTAGGAAATAGAACTAACCTGACCCTCAAGTTGTGTAGTTTGAGGTGATCTGAGGCAAAGGCTTAGTTCCATCTCTGGTAAAGCTAATTACAAGTTAGGATGATGTTTGGTCATTAGCTGGAGTAGAATTATGAACAGAACCATTCTTTTTCTTGTTCTAAAGTTATTTGTGAGATTCCACGTCGGTTGGAGAGGGGAACGAAACATTTCTTATAAGGGTGTGGAAACCTCTCCCTAATAGACGCATTTTAAAATCGTGAGGCTGTTGGCTATATGTAACGGACCAAAATAGACAGTATCTGCTAGCAGTGGGATTAGGCTATTACAAATGGTATTAGAGCAAGACACGAGGCAGTGTGCCAACGAGGACGTTGGGCCCTTAAGGGGGTGAATTTTGAAATCTCACATCGGTTGGAGAGGAGAATGAAGCATTTCTTATAAGGGTGTGGAAACCTCTCCCTAGTGGACGTGTTTTAAAATCGTGAGGCTGGCAATGATACGTAATAGACCAAAGCGGACGATATCTGTTAGCGGTGGGCTTAATCTAAAGCAACTAAGGCAAACCATATTGGATTTAGTAATGCGTTGCTCGTGTGTCAGTGTCAACTTCACCTCTAGCCTGATCATAGGATCCAAACATCCTATAAGTTTCCATGTTTAACAGAAGCTGAAGTTGCAGGAATTAGTCCACTTCCAACTCTTTCCATCATTGGCTTGTAACCATGTTCTTGAACATTACAATTGATATCTTCAATCTGGATTGGCTCTGCCTTGGCAACATTCACTTGTATATTACAGTCATTAACTTGTTACAGTTGCTTCTTTTCATTTCTTGGGCGTTGTTCCGGTTATTTTGAACCAAGATGAGTTTTCTGTGAGCAATCACAGTGGAAAGACATTGTTGTGGGACGAGGTTGTCTTGTGCTGTCGATTTCGACAGCATTTTCGTTACAGGATGAGAAGCTGA

mRNA sequence

ATGTCGACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCTTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTGGTCGTCTTGCTTCTCATCTTTCTTGGCCTCATCTACCATCCGTTTTCCATGATTGTGTTCTTCCTTGTCTTTGTTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGAGCCGTGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTTGCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGCTTGTGTTTCTGAGTTTGATCTGTTGATTACTGGGATGTTATCGTTGTTACCATTAGATAGAACCTTCACAAAATTCTCTTGGCTTAGCTGCCCACAGATATCTGTATTCGTTCTGTGGCTGTTTGTTGCCACAGTTCTGCGATGTCGTGCAGATGCGTCACTGGCTGACCGACCCTTCGATGTTGCTTCTTTTCATTTCTTGGGCGTTGTTCCGGTTATTTTGAACCAAGATGAGTTTTCTGTGAGCAATCACAGTGGAAAGACATTGTTGTGGGACGAGGTTGTCTTGTGCTGTCGATTTCGACAGCATTTTCGTTACAGGATGAGAAGCTGA

Coding sequence (CDS)

ATGTCGACCGCTGAATTCGCCGTCACTTTCAAGGAAGCCGGTCGATCCGTCATCGCCACCCGCCGTCCATGGCGGGAATTCCTCGACCCATTGTCTCTCAGCCTTCCTTCTTCCTTCTCCGACGCGACCTCTCGGATTTCTCAGAACTTGACCCGTTTCCTTTCCAATTACTGTCTGGTCGTCTTGCTTCTCATCTTTCTTGGCCTCATCTACCATCCGTTTTCCATGATTGTGTTCTTCCTTGTCTTTGTTGCCTGGTTCGTCCTTTACTTCTCCCGCGACGACCCAATTAGGGTTTTTGGTTTTGAGTTGGGAGATTTTGTTTTGGTCATCATTCTTGGGTTGGCTACCGGATTGGCGCTGGCTTTGACAGGGGTTTTCGTGAATGTGCTGATTTCGCTTGCCATTGGAGCCGTGGTGGTTTGTTTGCATGCGGCTTTGAAGGGCACGGAGGATGCTCTTGGGGATTTGCAAGACCCTTTTGGGGATACGCTGTTGGAGAGCCCGAGAGCTTGTGTTTCTGAGTTTGATCTGTTGATTACTGGGATGTTATCGTTGTTACCATTAGATAGAACCTTCACAAAATTCTCTTGGCTTAGCTGCCCACAGATATCTGTATTCGTTCTGTGGCTGTTTGTTGCCACAGTTCTGCGATGTCGTGCAGATGCGTCACTGGCTGACCGACCCTTCGATGTTGCTTCTTTTCATTTCTTGGGCGTTGTTCCGGTTATTTTGAACCAAGATGAGTTTTCTGTGAGCAATCACAGTGGAAAGACATTGTTGTGGGACGAGGTTGTCTTGTGCTGTCGATTTCGACAGCATTTTCGTTACAGGATGAGAAGCTGA

Protein sequence

MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIGAVVVCLHAALKGTEDALGDLQDPFGDTLLESPRACVSEFDLLITGMLSLLPLDRTFTKFSWLSCPQISVFVLWLFVATVLRCRADASLADRPFDVASFHFLGVVPVILNQDEFSVSNHSGKTLLWDEVVLCCRFRQHFRYRMRS
Homology
[Close]
BLAST of Cp4.1LG08g03750 vs. Swiss-Prot
Match: PRA1D_ARATH (PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 2.6e-27
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S+    RPW +FLD  + S PSS +DAT+R++QNLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVLVIILGLATGLALALTGVFVN 130
             P +++ F  V +AWF LYF+R++P+ +FGF + D  V V+++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 131 VLISLAIGAVVVCLHAALKGTEDALG-DLQDPFGDTLLES 169
            L ++  G +V+ LHAAL+GT+D +  DL+ P+G  L  S
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTS 168

[Close]
BLAST of Cp4.1LG08g03750 vs. Swiss-Prot
Match: PRA1E_ARATH (PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 4.4e-27
Identity = 70/148 (47.30%), Postives = 97/148 (65.54%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           K+  +S+I T RPWRE LD  +LSLP  + +A + +  N++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRD--DPIRVFGFELGDFVLVIILGLATGLALALTGVFV 130
           YHP SMI F +VF+ W +LYFSRD  D I + G E+ D +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 131 NVLISLAIGAVVVCLHAALKGTEDALGD 157
           NVL+SL IG ++V  H A + T+D   D
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLD 184

[Close]
BLAST of Cp4.1LG08g03750 vs. Swiss-Prot
Match: PR1F3_ARATH (PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-22
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 1 

Query: 18  IATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMI 77
           +ATRR WR   D  S+ LP   SDA +RI  NL  F  NY +VVL++IF  LI+HP S+I
Sbjct: 33  LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 92

Query: 78  VFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIG 137
           VF ++ V W  LYF RD+PI++F F++ D  ++I+L + T + L LT    N++ +L  G
Sbjct: 93  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 152

Query: 138 AVVVCLHAALKGTEDALGD 157
           AV+V +H+ ++ TED   D
Sbjct: 153 AVLVLIHSVVRKTEDLFLD 171

[Close]
BLAST of Cp4.1LG08g03750 vs. Swiss-Prot
Match: PR1F2_ARATH (PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 7.2e-22
Identity = 64/152 (42.11%), Postives = 95/152 (62.50%), Query Frame = 1 

Query: 5   EFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLL 64
           E+    K   +S +ATRRPW+   D  S++LP  F DA SRI  NL  F +NY + VL +
Sbjct: 20  EYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFI 79

Query: 65  IFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALT 124
           +FL L+YHP S+IV  ++ V W  LYF RD+P+ VFG+++ D  ++I L + T + L LT
Sbjct: 80  LFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139

Query: 125 GVFVNVLISLAIGAVVVCLHAALKGTEDALGD 157
               N+L SL   AV+V +HAA++ +++   D
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]
BLAST of Cp4.1LG08g03750 vs. Swiss-Prot
Match: PR1F4_ARATH (PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 5.2e-20
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           K+  +  +ATRR WR   D  S  LP   SD  SRI  NL  F SNY +V+L +IF  LI
Sbjct: 26  KQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLI 85

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           +HP S+IVF  +   W  LYF RD P++VF F++ D  ++I L + T + L LT    N+
Sbjct: 86  WHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNI 145

Query: 131 LISLAIGAVVVCLHAALKGTEDALGD 157
           + +L  GAV+V +HA ++ T+D   D
Sbjct: 146 VAALMAGAVLVLIHAVIRKTDDLFLD 171

[Close]
BLAST of Cp4.1LG08g03750 vs. TrEMBL
Match: A0A0A0L7A7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.1e-74
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLV 60
           MSTAEFAVTFKEAGRSVIATRRPWREFLDP +LSLPSS SDAT+RIS NLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 61  VLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA 120
           VLLLIFLGLIYHPFSMIVF LVFVAWF LYFSRDDPIRVFGFEL D VL+IILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALKGTEDALGDLQDPFGDTLLESPR 171
           LALTGVFVNVLISLAIGAVVVCLHAAL+ TED +GD+QDPFGD LLESPR
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPR 170

[Close]
BLAST of Cp4.1LG08g03750 vs. TrEMBL
Match: M5XFQ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1)

HSP 1 Score: 167.2 bits (422), Expect = 2.9e-38
Identity = 88/156 (56.41%), Postives = 118/156 (75.64%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S IAT RPW E L+P +LSLPS+ S+ T+R++QNLT F SNY LV+L+++FL LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           YHP S+IVF ++F AW VLYFSRD P+ VFGF +GD V+++ILGL T LAL LT V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 131 LISLAIGAVVVCLHAALKGTED-ALGDLQDPFGDTL 166
           ++S+ IG  +V LHA  +GTED  + D + P+G  L
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMDDQESPYGALL 165

[Close]
BLAST of Cp4.1LG08g03750 vs. TrEMBL
Match: A0A061ENE3_THECC (CAMV movement protein interacting protein 7, putative OS=Theobroma cacao GN=TCM_020782 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 8.3e-33
Identity = 84/171 (49.12%), Postives = 121/171 (70.76%), Query Frame = 1 

Query: 9   TFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLG 68
           + KE  +S+ A RRPWREFLD  ++ LPSSFSD T+RI+QNLT F  NY +++LL++FL 
Sbjct: 7   SLKETAQSLTAIRRPWREFLDITAVDLPSSFSDVTTRIAQNLTHFRLNYTVILLLILFLS 66

Query: 69  LIYHPFSMIVFFLVFVAWFVLYFSRD--DPIRVFGFELGDFVLVIILGLATGLALALTGV 128
           LIYHP S++ F ++ +AWF LYF+RD  +P+ +FGF + + +++  L   T   L LTGV
Sbjct: 67  LIYHPLSLLTFLVILLAWFFLYFARDREEPVVIFGFTIDERLVIAALFGLTVAGLVLTGV 126

Query: 129 FVNVLISLAIGAVVVCLHAALKGTED-ALGDLQDPFGDTL------LESPR 171
           ++NVL ++AIGA +V LHAAL+ T+D  + DL+ P+G  L      L+SPR
Sbjct: 127 WLNVLGAVAIGASMVILHAALRSTDDLVMDDLESPYGHVLAGGDEELDSPR 177

[Close]
BLAST of Cp4.1LG08g03750 vs. TrEMBL
Match: V4S3I0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005568mg PE=4 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 1.8e-32
Identity = 84/162 (51.85%), Postives = 110/162 (67.90%), Query Frame = 1 

Query: 2   STAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVV 61
           S   F    K   +S+ ATRRPW +FLD  + +LP S SDAT+RI+QNLT F SNY ++ 
Sbjct: 7   SDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVIT 66

Query: 62  LLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLAL 121
           LL +FL LIYHP S+IVF L  VAWF LYF+RDDP+ V GF++ D V++  L   T   L
Sbjct: 67  LLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGL 126

Query: 122 ALTGVFVNVLISLAIGAVVVCLHAALKGTED-ALGDLQDPFG 163
            LT V+VNVL+S+ +GAV+V LHA  + T+D  + D + PFG
Sbjct: 127 VLTHVWVNVLVSVVVGAVLVILHAWFRSTDDLVMDDQESPFG 168

[Close]
BLAST of Cp4.1LG08g03750 vs. TrEMBL
Match: A0A067EJ32_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.4e-32
Identity = 84/162 (51.85%), Postives = 110/162 (67.90%), Query Frame = 1 

Query: 2   STAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVV 61
           S   F    K   +S+ ATRRPW +FLD  + +LP S SDAT+RI+QNLT F SNY ++ 
Sbjct: 7   SDTGFLSRVKRTTQSINATRRPWSDFLDLSAFNLPLSLSDATTRITQNLTHFRSNYAVIT 66

Query: 62  LLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLAL 121
           LL +FL LIYHP S+IVF L  VAWF LYF+RDDP+ V GF++ D V++  L   T   L
Sbjct: 67  LLALFLSLIYHPVSIIVFLLTLVAWFFLYFARDDPLTVLGFQVDDRVVIGALFAVTVTGL 126

Query: 122 ALTGVFVNVLISLAIGAVVVCLHAALKGTED-ALGDLQDPFG 163
            LT V+VNVL+S+ +GAV+V LHA  + T+D  + D + PFG
Sbjct: 127 VLTHVWVNVLVSVVVGAVLVILHAWFRSTDDLVMEDQESPFG 168

[Close]
BLAST of Cp4.1LG08g03750 vs. TAIR10
Match: AT1G04260.1 (AT1G04260.1 CAMV movement protein interacting protein 7)

HSP 1 Score: 124.0 bits (310), Expect = 1.4e-28
Identity = 69/160 (43.12%), Postives = 108/160 (67.50%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S+    RPW +FLD  + S PSS +DAT+R++QNLT F  NY +++ +L+ L LI
Sbjct: 10  KETAQSITGAARPWGDFLDLSAFSFPSSIADATTRVTQNLTHFRINYSIILSILLGLTLI 69

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGD-FVLVIILGLATGLALALTGVFVN 130
             P +++ F  V +AWF LYF+R++P+ +FGF + D  V V+++GL+ G +L  TGV++ 
Sbjct: 70  TRPIAILAFIAVGLAWFFLYFAREEPLTIFGFTIDDGIVAVLLIGLSIG-SLVTTGVWLR 129

Query: 131 VLISLAIGAVVVCLHAALKGTEDALG-DLQDPFGDTLLES 169
            L ++  G +V+ LHAAL+GT+D +  DL+ P+G  L  S
Sbjct: 130 ALTTVGFGVLVLILHAALRGTDDLVSDDLESPYGPMLSTS 168

[Close]
BLAST of Cp4.1LG08g03750 vs. TAIR10
Match: AT1G08770.1 (AT1G08770.1 prenylated RAB acceptor 1.E)

HSP 1 Score: 123.2 bits (308), Expect = 2.5e-28
Identity = 70/148 (47.30%), Postives = 97/148 (65.54%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           K+  +S+I T RPWRE LD  +LSLP  + +A + +  N++ F  NY L VL ++FLGLI
Sbjct: 37  KQTTQSMITTLRPWREILDLSALSLPRGYDEAMAHLKHNISYFRGNYALAVLAIVFLGLI 96

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRD--DPIRVFGFELGDFVLVIILGLATGLALALTGVFV 130
           YHP SMI F +VF+ W +LYFSRD  D I + G E+ D +++++L L T LAL  T V  
Sbjct: 97  YHPMSMIAFIVVFIGWILLYFSRDANDSIVISGKEVDDKIVLVLLSLVTVLALVYTDVGE 156

Query: 131 NVLISLAIGAVVVCLHAALKGTEDALGD 157
           NVL+SL IG ++V  H A + T+D   D
Sbjct: 157 NVLVSLIIGLLIVGAHGAFRNTDDLFLD 184

[Close]
BLAST of Cp4.1LG08g03750 vs. TAIR10
Match: AT3G13720.1 (AT3G13720.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 108.2 bits (269), Expect = 8.2e-24
Identity = 62/139 (44.60%), Postives = 90/139 (64.75%), Query Frame = 1 

Query: 18  IATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLIYHPFSMI 77
           +ATRR WR   D  S+ LP   SDA +RI  NL  F  NY +VVL++IF  LI+HP S+I
Sbjct: 33  LATRRAWRVMFDFHSMGLPHGVSDAFTRIKTNLAYFRMNYAIVVLIVIFFSLIWHPTSLI 92

Query: 78  VFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNVLISLAIG 137
           VF ++ V W  LYF RD+PI++F F++ D  ++I+L + T + L LT    N++ +L  G
Sbjct: 93  VFTVLVVVWIFLYFLRDEPIKLFRFQIDDRTVLIVLSVLTVVLLLLTNATFNIVGALVTG 152

Query: 138 AVVVCLHAALKGTEDALGD 157
           AV+V +H+ ++ TED   D
Sbjct: 153 AVLVLIHSVVRKTEDLFLD 171

[Close]
BLAST of Cp4.1LG08g03750 vs. TAIR10
Match: AT1G55190.1 (AT1G55190.1 PRA1 (Prenylated rab acceptor) family protein)

HSP 1 Score: 105.9 bits (263), Expect = 4.1e-23
Identity = 64/152 (42.11%), Postives = 95/152 (62.50%), Query Frame = 1 

Query: 5   EFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLL 64
           E+    K   +S +ATRRPW+   D  S++LP  F DA SRI  NL  F +NY + VL +
Sbjct: 20  EYISRAKHRIKSGLATRRPWKSMFDFESMTLPHGFFDAISRIKTNLGYFRANYAIGVLFI 79

Query: 65  IFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALT 124
           +FL L+YHP S+IV  ++ V W  LYF RD+P+ VFG+++ D  ++I L + T + L LT
Sbjct: 80  LFLSLLYHPTSLIVLSILVVFWIFLYFLRDEPLVVFGYQIDDRTVLIGLSVLTVVMLLLT 139

Query: 125 GVFVNVLISLAIGAVVVCLHAALKGTEDALGD 157
               N+L SL   AV+V +HAA++ +++   D
Sbjct: 140 HATSNILGSLLTAAVLVLIHAAVRRSDNLFLD 171

[Close]
BLAST of Cp4.1LG08g03750 vs. TAIR10
Match: AT3G13710.1 (AT3G13710.1 prenylated RAB acceptor 1.F4)

HSP 1 Score: 99.8 bits (247), Expect = 2.9e-21
Identity = 62/146 (42.47%), Postives = 87/146 (59.59%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           K+  +  +ATRR WR   D  S  LP   SD  SRI  NL  F SNY +V+L +IF  LI
Sbjct: 26  KQRIKDGLATRRSWRVMFDLHSTGLPHGVSDVFSRIKTNLAYFRSNYAIVILNVIFFSLI 85

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           +HP S+IVF  +   W  LYF RD P++VF F++ D  ++I L + T + L LT    N+
Sbjct: 86  WHPTSLIVFTGLVFLWIFLYFLRDVPLKVFRFQIDDRAVLIGLSVITIVLLLLTNATFNI 145

Query: 131 LISLAIGAVVVCLHAALKGTEDALGD 157
           + +L  GAV+V +HA ++ T+D   D
Sbjct: 146 VAALMAGAVLVLIHAVIRKTDDLFLD 171

[Close]
BLAST of Cp4.1LG08g03750 vs. NCBI nr
Match: gi|659076256|ref|XP_008438582.1| (PREDICTED: PRA1 family protein D [Cucumis melo])

HSP 1 Score: 288.1 bits (736), Expect = 1.6e-74
Identity = 154/170 (90.59%), Postives = 160/170 (94.12%), Query Frame = 1 

Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLV 60
           MSTAEFAVTFKEAGRSVIATRRPWREFLDP +LSLPSS SDAT+RIS NLTRFLSNYCLV
Sbjct: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPSALSLPSSLSDATTRISHNLTRFLSNYCLV 60

Query: 61  VLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA 120
           VLLLIFLGLIYHPFSMIVF LVFVAWF LYFSRDDPIRVFGFEL D VL+IILGLATGLA
Sbjct: 61  VLLLIFLGLIYHPFSMIVFLLVFVAWFFLYFSRDDPIRVFGFELDDLVLIIILGLATGLA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALKGTEDALGDLQDPFGDTLLESPR 171
           LALTGVFVNVLISLAIGAVVVCLHAAL+ TED +GD+QDPFGD LLESPR
Sbjct: 121 LALTGVFVNVLISLAIGAVVVCLHAALRSTEDLVGDMQDPFGDALLESPR 170

[Close]
BLAST of Cp4.1LG08g03750 vs. NCBI nr
Match: gi|470104050|ref|XP_004288430.1| (PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 168.7 bits (426), Expect = 1.5e-38
Identity = 92/170 (54.12%), Postives = 122/170 (71.76%), Query Frame = 1 

Query: 1   MSTAEFAVTFKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLV 60
           MST      FKEAG+S +A  RPW EF D  +LSLP +FSDAT+R+ QN T F SNY ++
Sbjct: 1   MSTG-IVTRFKEAGQSAMAAHRPWSEFSDLSALSLPQNFSDATTRLFQNSTHFRSNYAML 60

Query: 61  VLLLIFLGLIYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLA 120
           VL+++FL L+YHP S+IVF LVF AW   YFSRDD + VFGF +GD V++ +LGL T +A
Sbjct: 61  VLVVLFLSLLYHPVSLIVFLLVFAAWVFFYFSRDDDVSVFGFVVGDRVVMAVLGLVTVVA 120

Query: 121 LALTGVFVNVLISLAIGAVVVCLHAALKGTED-ALGDLQDPFGDTLLESP 170
           L LT V++NV++S  +GAVVVC+HA  +GTED  + D + P+G  L + P
Sbjct: 121 LVLTNVWLNVVVSGVVGAVVVCVHAVFRGTEDLVMEDKESPYGALLSDDP 169

[Close]
BLAST of Cp4.1LG08g03750 vs. NCBI nr
Match: gi|596194906|ref|XP_007223565.1| (hypothetical protein PRUPE_ppa012254mg [Prunus persica])

HSP 1 Score: 167.2 bits (422), Expect = 4.2e-38
Identity = 88/156 (56.41%), Postives = 118/156 (75.64%), Query Frame = 1 

Query: 11  KEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGLI 70
           KE  +S IAT RPW E L+P +LSLPS+ S+ T+R++QNLT F SNY LV+L+++FL LI
Sbjct: 10  KEVSQSAIATLRPWGELLEPTALSLPSNLSEVTTRLAQNLTHFRSNYTLVLLIVLFLSLI 69

Query: 71  YHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVNV 130
           YHP S+IVF ++F AW VLYFSRD P+ VFGF +GD V+++ILGL T LAL LT V++NV
Sbjct: 70  YHPVSIIVFLIIFAAWLVLYFSRDQPLEVFGFTVGDRVVMVILGLVTVLALVLTHVWLNV 129

Query: 131 LISLAIGAVVVCLHAALKGTED-ALGDLQDPFGDTL 166
           ++S+ IG  +V LHA  +GTED  + D + P+G  L
Sbjct: 130 VVSVVIGVALVSLHAVFRGTEDLVMDDQESPYGALL 165

[Close]
BLAST of Cp4.1LG08g03750 vs. NCBI nr
Match: gi|658062596|ref|XP_008367200.1| (PREDICTED: PRA1 family protein D-like [Malus domestica])

HSP 1 Score: 162.2 bits (409), Expect = 1.4e-36
Identity = 86/157 (54.78%), Postives = 117/157 (74.52%), Query Frame = 1 

Query: 10  FKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGL 69
           FKEA ++  AT RPW E L+P +LSLPS  SDAT+R++QNLT F SNY L+ L+++FL L
Sbjct: 9   FKEATQTARATLRPWGELLEPTALSLPSGLSDATTRLAQNLTHFRSNYALIALIVLFLSL 68

Query: 70  IYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVN 129
           +YHPFS+IVF +VF AW VLYFSRD P+ VFGF + D V++++L + T +AL LT V+VN
Sbjct: 69  LYHPFSIIVFLIVFAAWLVLYFSRDQPLEVFGFVVPDRVVMVVLAVVTVVALVLTHVWVN 128

Query: 130 VLISLAIGAVVVCLHAALKGTED-ALGDLQDPFGDTL 166
           V++S  IG V++ LHA  +GTED  + D + P+G  L
Sbjct: 129 VVVSGVIGVVLIGLHAVFRGTEDLVMDDQESPYGALL 165

[Close]
BLAST of Cp4.1LG08g03750 vs. NCBI nr
Match: gi|658011606|ref|XP_008341051.1| (PREDICTED: PRA1 family protein D-like [Malus domestica])

HSP 1 Score: 156.8 bits (395), Expect = 5.7e-35
Identity = 84/157 (53.50%), Postives = 115/157 (73.25%), Query Frame = 1 

Query: 10  FKEAGRSVIATRRPWREFLDPLSLSLPSSFSDATSRISQNLTRFLSNYCLVVLLLIFLGL 69
           FKEA +S  AT RPW E L+P +L LPS+ S AT+R++QNLT F SNY L+ L+++FL L
Sbjct: 9   FKEATQSARATLRPWGELLEPTALRLPSNLSAATTRLAQNLTHFRSNYALIALIVLFLSL 68

Query: 70  IYHPFSMIVFFLVFVAWFVLYFSRDDPIRVFGFELGDFVLVIILGLATGLALALTGVFVN 129
           +YHPFS+IVF +VF AW VLYFSRD P+ VFGF + D V++++L L T +AL LT V++N
Sbjct: 69  LYHPFSIIVFLIVFAAWLVLYFSRDQPLEVFGFAVPDRVVMVVLALVTVVALVLTHVWLN 128

Query: 130 VLISLAIGAVVVCLHAALKGTED-ALGDLQDPFGDTL 166
           V++S  IG V++ LHA  +GTE   + D + P+G  L
Sbjct: 129 VIVSGVIGVVLIGLHAVFRGTEGLVMDDQESPYGALL 165

The following BLAST results are available for this feature:
BLAST of Cp4.1LG08g03750 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRA1D_ARATH2.6e-2743.13PRA1 family protein D OS=Arabidopsis thaliana GN=PRA1D PE=1 SV=1[more]
PRA1E_ARATH4.4e-2747.30PRA1 family protein E OS=Arabidopsis thaliana GN=PRA1E PE=1 SV=1[more]
PR1F3_ARATH1.5e-2244.60PRA1 family protein F3 OS=Arabidopsis thaliana GN=PRA1F3 PE=1 SV=1[more]
PR1F2_ARATH7.2e-2242.11PRA1 family protein F2 OS=Arabidopsis thaliana GN=PRA1F2 PE=1 SV=1[more]
PR1F4_ARATH5.2e-2042.47PRA1 family protein F4 OS=Arabidopsis thaliana GN=PRA1F4 PE=2 SV=1[more]
BLAST of Cp4.1LG08g03750 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0L7A7_CUCSA1.1e-7490.59Uncharacterized protein OS=Cucumis sativus GN=Csa_3G143550 PE=4 SV=1[more]
M5XFQ2_PRUPE2.9e-3856.41Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa012254mg PE=4 SV=1[more]
A0A061ENE3_THECC8.3e-3349.12CAMV movement protein interacting protein 7, putative OS=Theobroma cacao GN=TCM_... [more]
V4S3I0_9ROSI1.8e-3251.85Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005568mg PE=4 SV=1[more]
A0A067EJ32_CITSI2.4e-3251.85Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g029745mg PE=4 SV=1[more]
BLAST of Cp4.1LG08g03750 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G04260.11.4e-2843.13 CAMV movement protein interacting protein 7[more]
AT1G08770.12.5e-2847.30 prenylated RAB acceptor 1.E[more]
AT3G13720.18.2e-2444.60 PRA1 (Prenylated rab acceptor) family protein[more]
AT1G55190.14.1e-2342.11 PRA1 (Prenylated rab acceptor) family protein[more]
AT3G13710.12.9e-2142.47 prenylated RAB acceptor 1.F4[more]
BLAST of Cp4.1LG08g03750 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659076256|ref|XP_008438582.1|1.6e-7490.59PREDICTED: PRA1 family protein D [Cucumis melo][more]
gi|470104050|ref|XP_004288430.1|1.5e-3854.12PREDICTED: PRA1 family protein D-like [Fragaria vesca subsp. vesca][more]
gi|596194906|ref|XP_007223565.1|4.2e-3856.41hypothetical protein PRUPE_ppa012254mg [Prunus persica][more]
gi|658062596|ref|XP_008367200.1|1.4e-3654.78PREDICTED: PRA1 family protein D-like [Malus domestica][more]
gi|658011606|ref|XP_008341051.1|5.7e-3553.50PREDICTED: PRA1 family protein D-like [Malus domestica][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0044765 single-organism transport
biological_process GO:0016192 vesicle-mediated transport
biological_process GO:0008150 biological_process
biological_process GO:0006144 purine nucleobase metabolic process
biological_process GO:0006206 pyrimidine nucleobase metabolic process
biological_process GO:0006351 transcription, DNA-templated
cellular_component GO:0005737 cytoplasm
cellular_component GO:0005575 cellular_component
cellular_component GO:0005730 nucleolus
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003674 molecular_function
molecular_function GO:0003899 DNA-directed RNA polymerase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG08g03750.1Cp4.1LG08g03750.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG08g03750Cucsa.254890Cucumber (Gy14) v1cgycpeB0687
Cp4.1LG08g03750CmaCh14G017760Cucurbita maxima (Rimu)cmacpeB292
Cp4.1LG08g03750CmaCh06G013430Cucurbita maxima (Rimu)cmacpeB853
Cp4.1LG08g03750CmoCh06G013540Cucurbita moschata (Rifu)cmocpeB796
Cp4.1LG08g03750CmoCh14G018130Cucurbita moschata (Rifu)cmocpeB254
Cp4.1LG08g03750Cla021568Watermelon (97103) v1cpewmB845
Cp4.1LG08g03750Csa3G143550Cucumber (Chinese Long) v2cpecuB859
Cp4.1LG08g03750MELO3C006474Melon (DHL92) v3.5.1cpemeB813
Cp4.1LG08g03750CSPI03G12510Wild cucumber (PI 183967)cpecpiB861
Cp4.1LG08g03750Lsi05G016670Bottle gourd (USVL1VR-Ls)cpelsiB714
Cp4.1LG08g03750MELO3C006474.2Melon (DHL92) v3.6.1cpemedB951
Cp4.1LG08g03750CsaV3_3G012630Cucumber (Chinese Long) v3cpecucB1056
Cp4.1LG08g03750BhiUN393G9Wax gourdcpewgoB1121
Cp4.1LG08g03750CsGy3G012650Cucumber (Gy14) v2cgybcpeB454
Cp4.1LG08g03750Carg08987Silver-seed gourdcarcpeB1101
Cp4.1LG08g03750Carg06194Silver-seed gourdcarcpeB1333
Cp4.1LG08g03750Carg16589Silver-seed gourdcarcpeB0336
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG08g03750Cp4.1LG03g10250Cucurbita pepo (Zucchini)cpecpeB482
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG08g03750Cucurbita pepo (Zucchini)cpecpeB194
Cp4.1LG08g03750Cucurbita pepo (Zucchini)cpecpeB342
Cp4.1LG08g03750Cucurbita pepo (Zucchini)cpecpeB507
Cp4.1LG08g03750Cucurbita maxima (Rimu)cmacpeB019
Cp4.1LG08g03750Cucurbita maxima (Rimu)cmacpeB411
Cp4.1LG08g03750Cucurbita maxima (Rimu)cmacpeB554
Cp4.1LG08g03750Cucurbita maxima (Rimu)cmacpeB650
Cp4.1LG08g03750Cucurbita maxima (Rimu)cmacpeB931
Cp4.1LG08g03750Cucurbita moschata (Rifu)cmocpeB373
Cp4.1LG08g03750Cucurbita moschata (Rifu)cmocpeB866
Cp4.1LG08g03750Wild cucumber (PI 183967)cpecpiB851
Cp4.1LG08g03750Cucumber (Chinese Long) v2cpecuB849
Cp4.1LG08g03750Bottle gourd (USVL1VR-Ls)cpelsiB697
Cp4.1LG08g03750Bottle gourd (USVL1VR-Ls)cpelsiB704
Cp4.1LG08g03750Bottle gourd (USVL1VR-Ls)cpelsiB716
Cp4.1LG08g03750Watermelon (Charleston Gray)cpewcgB762
Cp4.1LG08g03750Watermelon (Charleston Gray)cpewcgB787
Cp4.1LG08g03750Watermelon (Charleston Gray)cpewcgB788
Cp4.1LG08g03750Watermelon (97103) v1cpewmB823
Cp4.1LG08g03750Watermelon (97103) v1cpewmB841
Cp4.1LG08g03750Watermelon (97103) v1cpewmB853
Cp4.1LG08g03750Melon (DHL92) v3.5.1cpemeB804
Cp4.1LG08g03750Cucumber (Gy14) v2cgybcpeB278
Cp4.1LG08g03750Melon (DHL92) v3.6.1cpemedB944
Cp4.1LG08g03750Silver-seed gourdcarcpeB0329
Cp4.1LG08g03750Cucumber (Chinese Long) v3cpecucB1045
Cp4.1LG08g03750Wax gourdcpewgoB1100