Cucsa.218410 (gene) Cucumber (Gy14) v1

Overview
NameCucsa.218410
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionRing finger protein, putative
Locationscaffold01658 : 510446 .. 511902 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGCTGATCATATCAATCCCACTTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACATGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCCGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATTCAGCCAATGAGAAGATCTGTATCTTTAGATTCTCTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGGGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGAGCTGTTTTTCTTTTTGTCTTTCTTCTTCTTTTTGTGATATCTCTGAAGATGGAGATGTCTATACAAACAAACTCTCAGAAAGCTGAGAGGTTTCAAAGGCTGTTCTTGTTTTTGTCAAATACAGGTGATATGAAAAGATCAATGGTATATAATATATGCATACAAAGTTTAAATATGTTTCTTGTGAAATGTTCTGACTCTGGATGTTGTGATTACTTTACAACTCTATCATGCTTTCTCAATTACATGATTATAAGCAGAGTAAATCAATATTATCATTCAACAGAACTTAACTAAGACGATGTTTGTTTGTTTTTTAGTTACTGAGTGAGTAAATCTTGGCATGAAATCATCAAATTTCTCAATAATTTTTTTGTAGTTTGATTACGTTTTTAACGATCTCAATGTGCCTTTTGGTTTTTTTCATTCAGTATTCCTAGTGATTATTTCGTTCATTCATCTAGGATTCAATCAAACCCCTCGAAACGAAGAACTTTTGACCTTTAGCCCAGAAAATCATACCTATTATCCTTGTAG

mRNA sequence

ACGCTGATCATATCAATCCCACTTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACATGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCCGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTgaagaagaacaagaagaacaagaagaacaagaaACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATTCAGCCAATGAGAAGATCTGTATCTTTAGATTCTCTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAATGGAGATGTCTATACAAACAAACTCTCAGAAAGCTGAGAGGTTTCAAAGGCTGTTCTTGTTTTTGTCAAATACAGGTGATATGAAAAGATCAATGCCCAGAAAATCATACCTATTATCCTTGTAG

Coding sequence (CDS)

ACGCTGATCATATCAATCCCACTTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACATGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCCGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATTCAGCCAATGAGAAGATCTGTATCTTTAGATTCTCTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAATGGAGATGTCTATACAAACAAACTCTCAGAAAGCTGAGAGGTTTCAAAGGCTGTTCTTGTTTTTGTCAAATACAGGTGATATGAAAAGATCAATGCCCAGAAAATCATACCTATTATCCTTGTAG

Protein sequence

ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMSIQTNSQKAERFQRLFLFLSNTGDMKRSMPRKSYLLSL*
Homology
[Close]
BLAST of Cucsa.218410 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 3.2e-37
Identity = 100/303 (33.00%), Postives = 155/303 (51.16%), Query Frame = 1 

Query: 6   PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRL----PDPPPPET 65
           P+    S     +++T T A+L+   +L+  + + A+F++    R+       D    +T
Sbjct: 72  PSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDT 131

Query: 66  HHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFE 125
             + +F D EQ   +DHPIW IRT GL  ++I++I +C +K G+GLI+ T+C VCL+EFE
Sbjct: 132 VMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFE 191

Query: 126 EDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIG 185
           EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +    A  + + P+   P E   G
Sbjct: 192 EDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGPVEVTPG 251

Query: 186 ELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSAL 245
                 G G++L       E+  E +   ++ F + D     SDI+          +   
Sbjct: 252 ------GSGSHLENDGVDEEDHGEIENRVDSDFKESD----DSDIR----------IEIY 311

Query: 246 RISSD----FANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMSIQTNSQKAER 301
           R  SD         E++    E +  NG  S     H+ T     S++   ++   ++E 
Sbjct: 312 RFDSDGDGSETETKERVRVLKECMDPNGGDSVNSLSHTKTHV--ESVDFPGKSCENQSEE 342

[Close]
BLAST of Cucsa.218410 vs. Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.7e-35
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = 1 

Query: 13  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQ 72
           P +LS L+ ++I ++  + +L L    +   +  ++RRI      P +T+ Q D  + E+
Sbjct: 35  PRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEE 94

Query: 73  GPVLD-HPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPK 132
               D H +W I T+GL  + I++I V  FK GEG+IDGTECSVCL+EFEEDE+LRLLPK
Sbjct: 95  RDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPK 154

Query: 133 CSHAFHLPCIDTWLRSHTNCPMCRAPVV 160
           CSHAFHL CIDTWL SH NCP+CRAPV+
Sbjct: 155 CSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]
BLAST of Cucsa.218410 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-28
Identity = 76/202 (37.62%), Postives = 109/202 (53.96%), Query Frame = 1 

Query: 87  GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 146
           GL  ++I +I V K+KSG+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPCIDTWL+
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175

Query: 147 SHTNCPMCRAPV---------VAQSAAAAASPPQLRPPAETQIGEL-------QREEGDG 206
           SH+NCP+CRA V         V Q+ +   +           + E+       + + GD 
Sbjct: 176 SHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDF 235

Query: 207 ANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANV 266
            ++          +      E    +E  E +  D  P+RRSVSL+S   + I+     +
Sbjct: 236 DSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREI 295

Query: 267 NEKMDSEAETIQRNGKKSSQGR 273
               D E E+    G  +SQ R
Sbjct: 296 E---DEEGES---GGVGTSQRR 311

[Close]
BLAST of Cucsa.218410 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-24
Identity = 66/175 (37.71%), Postives = 90/175 (51.43%), Query Frame = 1 

Query: 17  SNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIR------------LPDPPPPETHHQ 76
           S LV + I +L+  FLLV  Y   ++ Y G    +R                      H 
Sbjct: 56  SPLVIAIIGVLASAFLLVSYYTFISK-YCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHG 115

Query: 77  HDFLDEEQGPVLDHPIWYIRT-IGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 136
           H       G    H  W +    GL   +I+ I VCK++ G+G +  T+CSVCL EF + 
Sbjct: 116 H-------GQSRSHESWNVSPPSGLDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDG 175

Query: 137 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAET 179
           E+LRLLP+CSHAFH  CIDTWL+SH+NCP+CRA +   +   A+  P+   P ET
Sbjct: 176 ESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANITFVTVGLASPEPEGCAPGET 222

[Close]
BLAST of Cucsa.218410 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 113.6 bits (283), Expect = 4.0e-24
Identity = 78/228 (34.21%), Postives = 113/228 (49.56%), Query Frame = 1 

Query: 87  GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 146
           GL  ++I +I V K++  +G ++ ++CSVCLSEF+E+E+LRLLPKC+HAFH+PCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 147 SHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLGESSARTEEEQEE 206
           SH+NCP+CRA +V  SA         +   E        +     NL   ++R+    E 
Sbjct: 193 SHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRS--RNET 252

Query: 207 QEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRNGK 266
             E  T    E  + R  +    RRS SL+S   +   +D   + E  D E        +
Sbjct: 253 VNEGSTPKPPEMQDSRDGE---ERRSASLNSGGGVVSIADI--LREIEDDEESAGVGTSR 312

Query: 267 KSSQGRGHSSTSSMNRSMEMSIQTNSQKAERFQRLFLFLSNTGDMKRS 315
              +G G  +      S   + QTN          FL  S+   MKRS
Sbjct: 313 WVEEGEGEKTPPP---SGSAANQTNGISN------FLVRSSMAAMKRS 344

[Close]
BLAST of Cucsa.218410 vs. TrEMBL
Match: A0A0A0K2P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1)

HSP 1 Score: 576.6 bits (1485), Expect = 1.9e-161
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 1 

Query: 1   ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE 60
           ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE
Sbjct: 56  ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE 115

Query: 61  THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF 120
           THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF
Sbjct: 116 THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF 175

Query: 121 EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI 180
           EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI
Sbjct: 176 EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI 235

Query: 181 GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA 240
           GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA
Sbjct: 236 GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA 295

Query: 241 LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMS 288
           LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRS+  S
Sbjct: 296 LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCS 342

[Close]
BLAST of Cucsa.218410 vs. TrEMBL
Match: A0A059BC62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1)

HSP 1 Score: 274.6 bits (701), Expect = 1.5e-70
Identity = 147/244 (60.25%), Postives = 178/244 (72.95%), Query Frame = 1 

Query: 13  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRR-RIRLPDPPPPETHHQHD-FLDE 72
           PH LS  +    A L+  F+LV+CYA+YAR+Y+GR R R R P    PET   HD FLD 
Sbjct: 79  PHHLSPFLIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDH 138

Query: 73  EQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLP 132
           +QGPVLDHPIWYIRT+GLPP+VI AI  CK+K GEGLI+GTECSVCLSEF+EDETLRLLP
Sbjct: 139 DQGPVLDHPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLP 198

Query: 133 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAET--QIGELQREEG 192
           KC+HAFH+PCIDTWLRSHTNCP+CRAP+V  + AA A PP+ RP AE+    GE+  +E 
Sbjct: 199 KCNHAFHVPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPE-RPNAESSASAGEMGIQEV 258

Query: 193 DGANLGESSARTEE---EQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 250
           D   LG  + R  E   E EE  E +     + +E+ S+++QPMRRSVSLDSLSAL+IS 
Sbjct: 259 DD-GLGREAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISL 318

[Close]
BLAST of Cucsa.218410 vs. TrEMBL
Match: B9S9D3_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 1.6e-64
Identity = 143/299 (47.83%), Postives = 187/299 (62.54%), Query Frame = 1 

Query: 26  LLSFTFLLVLCYAIYARFYAGRRR-RIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIR 85
           +LS  F LV CYAIY +FY+G RR R   P     ET H+ +FLDE+ GP+LDHP+WYI 
Sbjct: 69  VLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTHE-EFLDEDHGPILDHPVWYIN 128

Query: 86  TIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTW 145
           TIGL P+VI++I+VCK+K G+GL++GT+CSVCL+EFEEDETLRLLPKCSHAFH+PCIDTW
Sbjct: 129 TIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKCSHAFHIPCIDTW 188

Query: 146 LRSHTNCPMCRAPVVAQSAAAAAS---PPQLRPPAETQIGELQREEGDGANL--GESSAR 205
           LRSHTNCP+CRAP+VA SA A +S      L    ET+IG  + ++     L  G+   R
Sbjct: 189 LRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQESERELEGGDGELR 248

Query: 206 TE-EEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFAN--------- 265
              EE+ E E++ T    E L      IQP+RRSVSLDSLSA +IS    +         
Sbjct: 249 VGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLSAFKISQALVSVCPVESDRN 308

Query: 266 -----VNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMSIQTNSQKAERFQRLFL 304
                VNE   S     +R G   S  +   ++SS+ RS+++   +  +      +LFL
Sbjct: 309 SRTGLVNESESSMEIVPKRVGSNQSLLK-FMASSSIGRSLQIGPSSIKRSLSCGGKLFL 365

[Close]
BLAST of Cucsa.218410 vs. TrEMBL
Match: B9HEH8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g PE=4 SV=2)

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-63
Identity = 136/289 (47.06%), Postives = 181/289 (62.63%), Query Frame = 1 

Query: 15  KLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGP 74
           KLS +  + I L   T +L  CYAIYA+F   RRRR    +        +  F DE++G 
Sbjct: 11  KLSKIALAMIVLSVITSVLATCYAIYAKFIRPRRRRSTQREEEAEIIETRDQFADEDEGR 70

Query: 75  VLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSH 134
           V+DHPIWYIRT+GL P+VI +I V K+KSG+GL++GTECSVCLSEF++DETLRLLPKCSH
Sbjct: 71  VVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLLPKCSH 130

Query: 135 AFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLG 194
           AFH+PCIDTWLRSHTNCP+CRAP+V  +A A +S   L   +  +   ++  E D  +  
Sbjct: 131 AFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEVSEEDQESSR 190

Query: 195 ESSAR-------TEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDF 254
           E   R       TEEE E Q E      +E++EE    IQP+RRSVSLDSLSA +I    
Sbjct: 191 EMEGRDGGVRVVTEEESELQSENLNEEEEEEVEEEDG-IQPLRRSVSLDSLSAFKIIQAL 250

Query: 255 ANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNR---SMEMSIQTNSQ 294
           ANV+  ++S+  +     +++  G G S  S  NR   S++ SI  + +
Sbjct: 251 ANVHPAVESDRNS---GTRRAGGGDGSSGESVQNRGPSSLKRSISCSGK 295

[Close]
BLAST of Cucsa.218410 vs. TrEMBL
Match: W9S7L2_9ROSA (RING-H2 finger protein ATL54 OS=Morus notabilis GN=L484_004136 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 1.9e-60
Identity = 131/300 (43.67%), Postives = 180/300 (60.00%), Query Frame = 1 

Query: 6   PTSSIK---SPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETH 65
           PTS I    + HK S  +T TI LL+ +FL++  Y  Y ++Y   RRR            
Sbjct: 50  PTSVISYSHNHHKFSTFLTVTIVLLAASFLVICGYVFYTKYYNNSRRR-NSSRQSDHRNR 109

Query: 66  HQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEE 125
             H+FLDEE GP LDHPIWYIRT GL P++I++IAV K+K GEGL++GT+CSVCLSEF+E
Sbjct: 110 DDHEFLDEEHGPTLDHPIWYIRTAGLQPSIINSIAVLKYKKGEGLVEGTDCSVCLSEFQE 169

Query: 126 DETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGE 185
           DE+LRLLPKCSHAFH+PCIDTWLRSHTNCPMCRAP+V  S    + P    P +     E
Sbjct: 170 DESLRLLPKCSHAFHIPCIDTWLRSHTNCPMCRAPIVINSVIRTSLP---EPSSVDSGSE 229

Query: 186 LQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALR 245
            +   G+  N GE+ A    ++E +  + +   +  L+  S   QP RRS SLD  S  +
Sbjct: 230 EEIRPGNSENDGENDAEMGRDEEGKRGESSGDIEVVLDRMS---QPSRRSFSLDCSSGWK 289

Query: 246 ISSDFA-----NVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMSIQTNSQKAER 298
           ISS  +     ++++KM+++ +    NG+K   G       + + S E S+Q+     +R
Sbjct: 290 ISSAMSKECDGSMDKKMETDNKLRSANGEKKVGGNQKLQRMTSSSSNERSLQSGPVSMKR 342

[Close]
BLAST of Cucsa.218410 vs. TAIR10
Match: AT4G33565.1 (AT4G33565.1 RING/U-box superfamily protein)

HSP 1 Score: 181.4 bits (459), Expect = 8.8e-46
Identity = 106/245 (43.27%), Postives = 141/245 (57.55%), Query Frame = 1 

Query: 4   INPTSSIKSPHKLSNLV----TSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPP 63
           ++P + I     L  ++    +S I  L    LLVLC+    +FY  RRR I        
Sbjct: 109 LSPPAEIHHDDNLKRILIISASSIITTLFLLTLLVLCF----KFYYRRRRSITTSRRWSM 168

Query: 64  ETHHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSE 123
           E     DF D     ++DHPIW+IRTIGL P VI +I VC++   +G+++GT+CSVCLSE
Sbjct: 169 EEARNWDF-DGPAPVIVDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSE 228

Query: 124 FEEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQ 183
           FEE+ETLRLLPKC HAFHL CIDTWLRSHTNCP+CRAP+V  +         L    E  
Sbjct: 229 FEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRAPIVEANTMIDDHSEGL----EEI 288

Query: 184 IGELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLS 243
              +  E GD           + ++E +EE++   ++   +   S  Q +RRSVSLDSLS
Sbjct: 289 SVMIPEENGD-----------DTDEEIEEERDGFVSNISRDHGESQQQRVRRSVSLDSLS 333

Query: 244 ALRIS 245
            LR+S
Sbjct: 349 GLRVS 333

[Close]
BLAST of Cucsa.218410 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 157.1 bits (396), Expect = 1.8e-38
Identity = 100/303 (33.00%), Postives = 155/303 (51.16%), Query Frame = 1 

Query: 6   PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRL----PDPPPPET 65
           P+    S     +++T T A+L+   +L+  + + A+F++    R+       D    +T
Sbjct: 72  PSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDT 131

Query: 66  HHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFE 125
             + +F D EQ   +DHPIW IRT GL  ++I++I +C +K G+GLI+ T+C VCL+EFE
Sbjct: 132 VMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFE 191

Query: 126 EDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIG 185
           EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +    A  + + P+   P E   G
Sbjct: 192 EDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGPVEVTPG 251

Query: 186 ELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSAL 245
                 G G++L       E+  E +   ++ F + D     SDI+          +   
Sbjct: 252 ------GSGSHLENDGVDEEDHGEIENRVDSDFKESD----DSDIR----------IEIY 311

Query: 246 RISSD----FANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMSIQTNSQKAER 301
           R  SD         E++    E +  NG  S     H+ T     S++   ++   ++E 
Sbjct: 312 RFDSDGDGSETETKERVRVLKECMDPNGGDSVNSLSHTKTHV--ESVDFPGKSCENQSEE 342

[Close]
BLAST of Cucsa.218410 vs. TAIR10
Match: AT5G10380.1 (AT5G10380.1 RING/U-box superfamily protein)

HSP 1 Score: 151.4 bits (381), Expect = 9.8e-37
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = 1 

Query: 13  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQ 72
           P +LS L+ ++I ++  + +L L    +   +  ++RRI      P +T+ Q D  + E+
Sbjct: 35  PRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEE 94

Query: 73  GPVLD-HPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPK 132
               D H +W I T+GL  + I++I V  FK GEG+IDGTECSVCL+EFEEDE+LRLLPK
Sbjct: 95  RDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPK 154

Query: 133 CSHAFHLPCIDTWLRSHTNCPMCRAPVV 160
           CSHAFHL CIDTWL SH NCP+CRAPV+
Sbjct: 155 CSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]
BLAST of Cucsa.218410 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 128.3 bits (321), Expect = 8.9e-30
Identity = 76/202 (37.62%), Postives = 109/202 (53.96%), Query Frame = 1 

Query: 87  GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 146
           GL  ++I +I V K+KSG+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPCIDTWL+
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175

Query: 147 SHTNCPMCRAPV---------VAQSAAAAASPPQLRPPAETQIGEL-------QREEGDG 206
           SH+NCP+CRA V         V Q+ +   +           + E+       + + GD 
Sbjct: 176 SHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDF 235

Query: 207 ANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANV 266
            ++          +      E    +E  E +  D  P+RRSVSL+S   + I+     +
Sbjct: 236 DSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREI 295

Query: 267 NEKMDSEAETIQRNGKKSSQGR 273
               D E E+    G  +SQ R
Sbjct: 296 E---DEEGES---GGVGTSQRR 311

[Close]
BLAST of Cucsa.218410 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.3e-25
Identity = 78/228 (34.21%), Postives = 113/228 (49.56%), Query Frame = 1 

Query: 87  GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 146
           GL  ++I +I V K++  +G ++ ++CSVCLSEF+E+E+LRLLPKC+HAFH+PCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 147 SHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLGESSARTEEEQEE 206
           SH+NCP+CRA +V  SA         +   E        +     NL   ++R+    E 
Sbjct: 193 SHSNCPLCRAFIVTSSAVEIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSRS--RNET 252

Query: 207 QEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRNGK 266
             E  T    E  + R  +    RRS SL+S   +   +D   + E  D E        +
Sbjct: 253 VNEGSTPKPPEMQDSRDGE---ERRSASLNSGGGVVSIADI--LREIEDDEESAGVGTSR 312

Query: 267 KSSQGRGHSSTSSMNRSMEMSIQTNSQKAERFQRLFLFLSNTGDMKRS 315
              +G G  +      S   + QTN          FL  S+   MKRS
Sbjct: 313 WVEEGEGEKTPPP---SGSAANQTNGISN------FLVRSSMAAMKRS 344

[Close]
BLAST of Cucsa.218410 vs. NCBI nr
Match: gi|449438582|ref|XP_004137067.1| (PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus])

HSP 1 Score: 576.6 bits (1485), Expect = 2.7e-161
Identity = 284/287 (98.95%), Postives = 285/287 (99.30%), Query Frame = 1 

Query: 1   ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE 60
           ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE
Sbjct: 56  ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE 115

Query: 61  THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF 120
           THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF
Sbjct: 116 THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF 175

Query: 121 EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI 180
           EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI
Sbjct: 176 EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI 235

Query: 181 GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA 240
           GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA
Sbjct: 236 GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSA 295

Query: 241 LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMS 288
           LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRS+  S
Sbjct: 296 LRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCS 342

[Close]
BLAST of Cucsa.218410 vs. NCBI nr
Match: gi|659110255|ref|XP_008455131.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 538.5 bits (1386), Expect = 8.1e-150
Identity = 267/288 (92.71%), Postives = 277/288 (96.18%), Query Frame = 1 

Query: 1   ADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPE 60
           AD IN TSS KSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFY+GRRRRIRLPDPPPPE
Sbjct: 57  ADDINQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRRRIRLPDPPPPE 116

Query: 61  THHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF 120
           THHQH+FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF
Sbjct: 117 THHQHEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEF 176

Query: 121 EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQI 180
           EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS+AAAASPP  RPPAETQI
Sbjct: 177 EEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSSAAAASPPPPRPPAETQI 236

Query: 181 GELQREEGDGANLGESSARTEEEQEEQ-EEQETHFADEDLEERSSDIQPMRRSVSLDSLS 240
           GELQREEGDGANLGESSAR EEEQE+Q EE+ETHFADEDLEERSSDIQP+RRSVSLDSLS
Sbjct: 237 GELQREEGDGANLGESSARNEEEQEQQHEEEETHFADEDLEERSSDIQPVRRSVSLDSLS 296

Query: 241 ALRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMS 288
           ALRISS FANVNEK+DS+AETIQR GKKSSQGRG+SSTSSMNRS+  S
Sbjct: 297 ALRISSVFANVNEKLDSDAETIQRKGKKSSQGRGYSSTSSMNRSVSCS 344

[Close]
BLAST of Cucsa.218410 vs. NCBI nr
Match: gi|702390666|ref|XP_010065673.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis])

HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70
Identity = 147/244 (60.25%), Postives = 178/244 (72.95%), Query Frame = 1 

Query: 13  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRR-RIRLPDPPPPETHHQHD-FLDE 72
           PH LS  +    A L+  F+LV+CYA+YAR+Y+GR R R R P    PET   HD FLD 
Sbjct: 79  PHHLSPFLIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDH 138

Query: 73  EQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLP 132
           +QGPVLDHPIWYIRT+GLPP+VI AI  CK+K GEGLI+GTECSVCLSEF+EDETLRLLP
Sbjct: 139 DQGPVLDHPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLP 198

Query: 133 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAET--QIGELQREEG 192
           KC+HAFH+PCIDTWLRSHTNCP+CRAP+V  + AA A PP+ RP AE+    GE+  +E 
Sbjct: 199 KCNHAFHVPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPE-RPNAESSASAGEMGIQEV 258

Query: 193 DGANLGESSARTEE---EQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 250
           D   LG  + R  E   E EE  E +     + +E+ S+++QPMRRSVSLDSLSAL+IS 
Sbjct: 259 DD-GLGREAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISL 318

[Close]
BLAST of Cucsa.218410 vs. NCBI nr
Match: gi|255563198|ref|XP_002522602.1| (PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis])

HSP 1 Score: 254.6 bits (649), Expect = 2.3e-64
Identity = 143/299 (47.83%), Postives = 187/299 (62.54%), Query Frame = 1 

Query: 26  LLSFTFLLVLCYAIYARFYAGRRR-RIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIR 85
           +LS  F LV CYAIY +FY+G RR R   P     ET H+ +FLDE+ GP+LDHP+WYI 
Sbjct: 69  VLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTHE-EFLDEDHGPILDHPVWYIN 128

Query: 86  TIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTW 145
           TIGL P+VI++I+VCK+K G+GL++GT+CSVCL+EFEEDETLRLLPKCSHAFH+PCIDTW
Sbjct: 129 TIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKCSHAFHIPCIDTW 188

Query: 146 LRSHTNCPMCRAPVVAQSAAAAAS---PPQLRPPAETQIGELQREEGDGANL--GESSAR 205
           LRSHTNCP+CRAP+VA SA A +S      L    ET+IG  + ++     L  G+   R
Sbjct: 189 LRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQESERELEGGDGELR 248

Query: 206 TE-EEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFAN--------- 265
              EE+ E E++ T    E L      IQP+RRSVSLDSLSA +IS    +         
Sbjct: 249 VGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLSAFKISQALVSVCPVESDRN 308

Query: 266 -----VNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSMEMSIQTNSQKAERFQRLFL 304
                VNE   S     +R G   S  +   ++SS+ RS+++   +  +      +LFL
Sbjct: 309 SRTGLVNESESSMEIVPKRVGSNQSLLK-FMASSSIGRSLQIGPSSIKRSLSCGGKLFL 365

[Close]
BLAST of Cucsa.218410 vs. NCBI nr
Match: gi|566179440|ref|XP_002310500.2| (hypothetical protein POPTR_0007s03610g, partial [Populus trichocarpa])

HSP 1 Score: 251.5 bits (641), Expect = 2.0e-63
Identity = 136/289 (47.06%), Postives = 181/289 (62.63%), Query Frame = 1 

Query: 15  KLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGP 74
           KLS +  + I L   T +L  CYAIYA+F   RRRR    +        +  F DE++G 
Sbjct: 11  KLSKIALAMIVLSVITSVLATCYAIYAKFIRPRRRRSTQREEEAEIIETRDQFADEDEGR 70

Query: 75  VLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSH 134
           V+DHPIWYIRT+GL P+VI +I V K+KSG+GL++GTECSVCLSEF++DETLRLLPKCSH
Sbjct: 71  VVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLLPKCSH 130

Query: 135 AFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLG 194
           AFH+PCIDTWLRSHTNCP+CRAP+V  +A A +S   L   +  +   ++  E D  +  
Sbjct: 131 AFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEVSEEDQESSR 190

Query: 195 ESSAR-------TEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDF 254
           E   R       TEEE E Q E      +E++EE    IQP+RRSVSLDSLSA +I    
Sbjct: 191 EMEGRDGGVRVVTEEESELQSENLNEEEEEEVEEEDG-IQPLRRSVSLDSLSAFKIIQAL 250

Query: 255 ANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNR---SMEMSIQTNSQ 294
           ANV+  ++S+  +     +++  G G S  S  NR   S++ SI  + +
Sbjct: 251 ANVHPAVESDRNS---GTRRAGGGDGSSGESVQNRGPSSLKRSISCSGK 295

The following BLAST results are available for this feature:
BLAST of Cucsa.218410 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL54_ARATH3.2e-3733.00RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2[more]
ATL55_ARATH1.7e-3550.68E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1[more]
ATL52_ARATH1.6e-2837.62RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1[more]
ATL41_ORYSJ1.4e-2437.71E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04... [more]
ATL51_ARATH4.0e-2434.21RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2[more]
BLAST of Cucsa.218410 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2P1_CUCSA1.9e-16198.95Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1[more]
A0A059BC62_EUCGR1.5e-7060.25Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1[more]
B9S9D3_RICCO1.6e-6447.83Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1[more]
B9HEH8_POPTR1.4e-6347.06Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g P... [more]
W9S7L2_9ROSA1.9e-6043.67RING-H2 finger protein ATL54 OS=Morus notabilis GN=L484_004136 PE=4 SV=1[more]
BLAST of Cucsa.218410 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33565.18.8e-4643.27 RING/U-box superfamily protein[more]
AT1G72220.11.8e-3833.00 RING/U-box superfamily protein[more]
AT5G10380.19.8e-3750.68 RING/U-box superfamily protein[more]
AT5G17600.18.9e-3037.62 RING/U-box superfamily protein[more]
AT3G03550.12.3e-2534.21 RING/U-box superfamily protein[more]
BLAST of Cucsa.218410 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438582|ref|XP_004137067.1|2.7e-16198.95PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus][more]
gi|659110255|ref|XP_008455131.1|8.1e-15092.71PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|702390666|ref|XP_010065673.1|2.2e-7060.25PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis][more]
gi|255563198|ref|XP_002522602.1|2.3e-6447.83PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis][more]
gi|566179440|ref|XP_002310500.2|2.0e-6347.06hypothetical protein POPTR_0007s03610g, partial [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.218410.1Cucsa.218410.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 112..155
score: 9.9
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 113..154
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 113..155
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 110..159
score: 7.3
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 5..180
score: 6.4
NoneNo IPR availablePANTHERPTHR14155:SF101SUBFAMILY NOT NAMEDcoord: 5..180
score: 6.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 107..161
score: 8.08

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cucsa.218410Cla012901Watermelon (97103) v1cgywmB416
Cucsa.218410Csa7G066300Cucumber (Chinese Long) v2cgycuB322
Cucsa.218410MELO3C018588Melon (DHL92) v3.5.1cgymeB379
Cucsa.218410ClCG09G015940Watermelon (Charleston Gray)cgywcgB392
Cucsa.218410CSPI07G06080Wild cucumber (PI 183967)cgycpiB336
Cucsa.218410CmaCh11G016590Cucurbita maxima (Rimu)cgycmaB0621
Cucsa.218410CmoCh11G014770Cucurbita moschata (Rifu)cgycmoB0622
Cucsa.218410Lsi03G007300Bottle gourd (USVL1VR-Ls)cgylsiB363
Cucsa.218410Cp4.1LG15g03610Cucurbita pepo (Zucchini)cgycpeB0597
Cucsa.218410Cp4.1LG04g07030Cucurbita pepo (Zucchini)cgycpeB0600
Cucsa.218410MELO3C018588.2Melon (DHL92) v3.6.1cgymedB377
Cucsa.218410CsaV3_7G007060Cucumber (Chinese Long) v3cgycucB342
Cucsa.218410Cla97C09G177750Watermelon (97103) v2cgywmbB399
Cucsa.218410Bhi05G000739Wax gourdcgywgoB451
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.218410Watermelon (97103) v2cgywmbB393
Cucsa.218410Wax gourdcgywgoB443
Cucsa.218410Wax gourdcgywgoB445
Cucsa.218410Cucurbita maxima (Rimu)cgycmaB0620
Cucsa.218410Cucurbita maxima (Rimu)cgycmaB0624
Cucsa.218410Cucurbita maxima (Rimu)cgycmaB0629
Cucsa.218410Cucurbita moschata (Rifu)cgycmoB0624
Cucsa.218410Cucurbita moschata (Rifu)cgycmoB0627
Cucsa.218410Cucurbita moschata (Rifu)cgycmoB0632
Cucsa.218410Watermelon (Charleston Gray)cgywcgB391
Cucsa.218410Watermelon (Charleston Gray)cgywcgB393
Cucsa.218410Watermelon (97103) v1cgywmB415
Cucsa.218410Watermelon (97103) v1cgywmB421
Cucsa.218410Cucurbita pepo (Zucchini)cgycpeB0594
Cucsa.218410Cucurbita pepo (Zucchini)cgycpeB0599
Cucsa.218410Cucurbita pepo (Zucchini)cgycpeB0602
Cucsa.218410Bottle gourd (USVL1VR-Ls)cgylsiB366
Cucsa.218410Bottle gourd (USVL1VR-Ls)cgylsiB367
Cucsa.218410Silver-seed gourdcarcgyB0339
Cucsa.218410Silver-seed gourdcarcgyB0435
Cucsa.218410Silver-seed gourdcarcgyB0825