CSPI07G06080 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G06080
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionRing finger protein, putative
LocationChr7 : 4514710 .. 4516084 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CAAAACAAAATCCGATTACCATTAAAACTAAACACATTCAAAACTTTCGGTGACCTACTTCCTTAAGCCACTCCATCTCCTCCTGCCGCCTGATTTTTCAACATTTCAACCCCTCTTTTCTTCAAATCCCCCATGGATTTCTTCTCCTCCAGAAAGCTTCTCTCCGAGGACGACGATGACCACAAGGAATTCTGCAAAGACTGCCGCGATTACTTTTCCGATTCTTGCTCTTCCGATTGCCTCGAAAAATGCCGCGATTACTGCTATAATATCAATATTCCAATCCGACCACCAGACGCTGATCATATCAATCCCACCTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACATGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCTGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATGCAGCCAATGAGAAGATCTGTATCTTTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGGGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGAGCTGTTTTTCTTTTTGTCTTTCTTCTTCTTTTTGTGATATCTCTGAAGATGGAGATGTCTATACAAACAAACTCTCAGAAAGCTGAGAGGTTTCAAAGGCTGTTCTTGTTTTTGTCAAATACAGGTGATATGAAAAGATCAATGGTATATAATATATGCA

mRNA sequence

ATGGATTTCTTCTCCTCCAGAAAGCTTCTCTCCGAGGACGACGATGACCACAAGGAATTCTGCAAAGACTGCCGCGATTACTTTTCCGATTCTTGCTCTTCCGATTGCCTCGAAAAATGCCGCGATTACTGCTATAATATCAATATTCCAATCCGACCACCAGACGCTGATCATATCAATCCCACCTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACATGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCTGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATGCAGCCAATGAGAAGATCTGTATCTTTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGGGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGA

Coding sequence (CDS)

ATGGATTTCTTCTCCTCCAGAAAGCTTCTCTCCGAGGACGACGATGACCACAAGGAATTCTGCAAAGACTGCCGCGATTACTTTTCCGATTCTTGCTCTTCCGATTGCCTCGAAAAATGCCGCGATTACTGCTATAATATCAATATTCCAATCCGACCACCAGACGCTGATCATATCAATCCCACCTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACATGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCTGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATGCAGCCAATGAGAAGATCTGTATCTTTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGGGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGA
Homology
[Close]
BLAST of CSPI07G06080 vs. Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 1.6e-34
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = 1 

Query: 68  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQ 127
           P +LS L+ ++I ++  + +L L    +   +  ++RRI      P +T+ Q D  + E+
Sbjct: 35  PRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEE 94

Query: 128 GPVLD-HPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPK 187
               D H +W I T+GL  + I++I V  FK GEG+IDGTECSVCL+EFEEDE+LRLLPK
Sbjct: 95  RDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPK 154

Query: 188 CSHAFHLPCIDTWLRSHTNCPMCRAPVV 215
           CSHAFHL CIDTWL SH NCP+CRAPV+
Sbjct: 155 CSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]
BLAST of CSPI07G06080 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 137.9 bits (346), Expect = 2.2e-31
Identity = 95/267 (35.58%), Postives = 146/267 (54.68%), Query Frame = 1 

Query: 23  DCRDYFSDS-CSSDCLEKCRDYCYNINIPIRPPDADHINPT-------SSIKSPHKLSNL 82
           DC +   D  C  +C  +  DY Y I+ P  PP +    P+       S++  P + S+ 
Sbjct: 22  DCSNGVCDPICPYNCYPE-PDY-YTIS-PQLPPWSSSPQPSPCPSPSISAVYLPSQDSSS 81

Query: 83  VTSTIALLSFT----FLLVLCYAIYARFYAGRRRRIRL----PDPPPPETHHQHDFLDEE 142
               I++++ T     +L+  + + A+F++    R+       D    +T  + +F D E
Sbjct: 82  SLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDRE 141

Query: 143 QGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPK 202
           Q   +DHPIW IRT GL  ++I++I +C +K G+GLI+ T+C VCL+EFEEDE+LRLLPK
Sbjct: 142 Q---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPK 201

Query: 203 CSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQREEGDGA 262
           C+HAFH+ CIDTWL SHTNCP+CRA +    A  + + P+   P E   G      G G+
Sbjct: 202 CNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGPVEVTPG------GSGS 261

Query: 263 NLGESSARTEEEQEEQEEQETHFADED 274
           +L       E+  E +   ++ F + D
Sbjct: 262 HLENDGVDEEDHGEIENRVDSDFKESD 272

[Close]
BLAST of CSPI07G06080 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 7.6e-24
Identity = 108/348 (31.03%), Postives = 161/348 (46.26%), Query Frame = 1 

Query: 26  DYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHINPTSSIKSPHKLSNLVTSTIALLSFT 85
           D ++D     C   C  +CY I  P  PP +  ++  SS  S    S L+ + I +L+  
Sbjct: 12  DSYNDCSQGICNIYCPQWCYLIFPP--PPPSFFLDDDSS-SSSSSFSPLLIALIGILTSA 71

Query: 86  FLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIRTIGLPP 145
            +LV  Y + +++    R             H+   F    Q    +         GL  
Sbjct: 72  LILVSYYTLISKYC--HRHHQTSSSETLNLNHNGEGFFSSTQRISTNGD-------GLNE 131

Query: 146 AVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTN 205
           ++I +I V K+KSG+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPCIDTWL+SH+N
Sbjct: 132 SMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN 191

Query: 206 CPMCRAPV---------VAQSAAAAASLPQLRPPAETQIGEL-------QREEGDGANLG 265
           CP+CRA V         V Q+ +   +           + E+       + + GD  ++ 
Sbjct: 192 CPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVV 251

Query: 266 ESSARTEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISSDFANVNEKM 325
                    +      E    +E  E +  D  P+RRSVSL+S   + I+     +    
Sbjct: 252 VIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIE--- 311

Query: 326 DSEAE-----TIQRNGK-KSSQGRGHSSTSSMNRSVSCSGKFLMRSST 352
           D E E     T QR  + +   G+    T +  RS   SG F+   ST
Sbjct: 312 DEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLST 344

[Close]
BLAST of CSPI07G06080 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 105.5 bits (262), Expect = 1.2e-21
Identity = 86/265 (32.45%), Postives = 120/265 (45.28%), Query Frame = 1 

Query: 36  CLEKCRDYCYNINIPIRPPDADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIY 95
           C   C  +CY I  P  PP  D    ++   S    S LV + I +L+  FLLV  Y   
Sbjct: 22  CSMYCPQWCYFIFPP--PPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFI 81

Query: 96  ARFYAGRRRRIR------------LPDPPPPETHHQHDFLDEEQGPVLDHPIWYIRT-IG 155
           ++ Y G    +R                      H H       G    H  W +    G
Sbjct: 82  SK-YCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGH-------GQSRSHESWNVSPPSG 141

Query: 156 LPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRS 215
           L   +I+ I VCK++ G+G +  T+CSVCL EF + E+LRLLP+CSHAFH  CIDTWL+S
Sbjct: 142 LDETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKS 201

Query: 216 HTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQREEGDGAN-----LGESSARTEE 275
           H+NCP+CRA +   +   A+  P+   P ET         GD  +     +       EE
Sbjct: 202 HSNCPLCRANITFVTVGLASPEPEGCAPGET--------GGDNTHEVVVVMDGLENLCEE 261

Query: 276 EQEEQEEQETHFADEDLEERSSDMQ 283
           +QE      T   D D ++ +  M+
Sbjct: 262 QQEAVSRASTADDDHDAKDVAEGME 268

[Close]
BLAST of CSPI07G06080 vs. Swiss-Prot
Match: ATL47_ARATH (RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 6.0e-21
Identity = 55/149 (36.91%), Postives = 87/149 (58.39%), Query Frame = 1 

Query: 62  TSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHD 121
           +SS    +++S ++   I LLS  F +     +  R+Y  +++R  L   P  E++   +
Sbjct: 40  SSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYL-KKKRSNLSSSPN-ESNQNPE 99

Query: 122 FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETL 181
           F D +        ++++   GL  A+IDA+ V  +K  +G  +  +C+VCL EF ED+ L
Sbjct: 100 FSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKL 159

Query: 182 RLLPKCSHAFHLPCIDTWLRSHTNCPMCR 211
           RLLP CSHAFH+ CIDTWL S++ CP+CR
Sbjct: 160 RLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

[Close]
BLAST of CSPI07G06080 vs. TrEMBL
Match: A0A0A0K2P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1)

HSP 1 Score: 699.1 bits (1803), Expect = 2.8e-198
Identity = 357/360 (99.17%), Postives = 358/360 (99.44%), Query Frame = 1 

Query: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60
           MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120
           PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120

Query: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180
           DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAAS PQLRPPAETQIGELQR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISS 300
           EEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSD+QPMRRSVSLDSLSALRISS
Sbjct: 241 EEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 300

Query: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSGKFLMRSSTQINTESNYS 360
           DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCS KFLMRSSTQINTESNYS
Sbjct: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS 360

[Close]
BLAST of CSPI07G06080 vs. TrEMBL
Match: A0A059BC62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1)

HSP 1 Score: 259.6 bits (662), Expect = 5.6e-66
Identity = 168/332 (50.60%), Postives = 214/332 (64.46%), Query Frame = 1 

Query: 32  CSSDCLEKCRDYCYNI--NIPIRPPDADHINPTSSIK---SPHKLSNLVTSTIALLSFTF 91
           C + CL+ C D C      +P+ PP      P S       PH LS  +    A L+  F
Sbjct: 38  CITPCLDVCPDVCRQPIPPLPLPPPCPPEDEPPSLDAYGGRPHHLSPFLIPLFAALAALF 97

Query: 92  LLVLCYAIYARFYAGRRR-RIRLPDPPPPETHHQHD-FLDEEQGPVLDHPIWYIRTIGLP 151
           +LV+CYA+YAR+Y+GR R R R P    PET   HD FLD +QGPVLDHPIWYIRT+GLP
Sbjct: 98  VLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDHDQGPVLDHPIWYIRTVGLP 157

Query: 152 PAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHT 211
           P+VI AI  CK+K GEGLI+GTECSVCLSEF+EDETLRLLPKC+HAFH+PCIDTWLRSHT
Sbjct: 158 PSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLPKCNHAFHVPCIDTWLRSHT 217

Query: 212 NCPMCRAPVVAQSAAAAASLPQLRPPAET--QIGELQREEGDGANLGESSARTEE---EQ 271
           NCP+CRAP+V     AA +LP  RP AE+    GE+  +E D   LG  + R  E   E 
Sbjct: 218 NCPLCRAPIV---TIAAQALPPERPNAESSASAGEMGIQEVDD-GLGREAERIAEPRGES 277

Query: 272 EEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRN 331
           EE  E +     + +E+ S+++QPMRRSVSLDSLSAL+IS   AN    +  E+ + +++
Sbjct: 278 EEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISLAVANA---LRGESGSSRKS 337

Query: 332 GKK-SSQGRGHSSTSSMNRSVSCSGKFLMRSS 351
           G + + +  G + T    R+ SC  K  MRS+
Sbjct: 338 GPELAGENHGIALTIVPKRNASCE-KQPMRST 361

[Close]
BLAST of CSPI07G06080 vs. TrEMBL
Match: B9HEH8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g PE=4 SV=2)

HSP 1 Score: 235.3 bits (599), Expect = 1.1e-58
Identity = 140/289 (48.44%), Postives = 184/289 (63.67%), Query Frame = 1 

Query: 70  KLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGP 129
           KLS +  + I L   T +L  CYAIYA+F   RRRR    +        +  F DE++G 
Sbjct: 11  KLSKIALAMIVLSVITSVLATCYAIYAKFIRPRRRRSTQREEEAEIIETRDQFADEDEGR 70

Query: 130 VLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSH 189
           V+DHPIWYIRT+GL P+VI +I V K+KSG+GL++GTECSVCLSEF++DETLRLLPKCSH
Sbjct: 71  VVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLLPKCSH 130

Query: 190 AFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQREEGDGANLG 249
           AFH+PCIDTWLRSHTNCP+CRAP+V  +A A +S   L   +  +   ++  E D  +  
Sbjct: 131 AFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEVSEEDQESSR 190

Query: 250 ESSAR-------TEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISSDF 309
           E   R       TEEE E Q E      +E++EE    +QP+RRSVSLDSLSA +I    
Sbjct: 191 EMEGRDGGVRVVTEEESELQSENLNEEEEEEVEEEDG-IQPLRRSVSLDSLSAFKIIQAL 250

Query: 310 ANVNEKMDSE--AETIQRNGKKSSQGRG--HSSTSSMNRSVSCSGKFLM 348
           ANV+  ++S+  + T +  G   S G    +   SS+ RS+SCSGKF +
Sbjct: 251 ANVHPAVESDRNSGTRRAGGGDGSSGESVQNRGPSSLKRSISCSGKFFL 298

[Close]
BLAST of CSPI07G06080 vs. TrEMBL
Match: B9S9D3_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.5e-58
Identity = 171/389 (43.96%), Postives = 216/389 (55.53%), Query Frame = 1 

Query: 7   RKLLSEDDDDHKEFCKDCRDYFSDSCSSDCL--------EKCRDYCY-NINIPIRPPDAD 66
           RKLL   DD + E         S  CSS C+        +    YCY N +  + PP   
Sbjct: 6   RKLL---DDSYNETA------LSKICSSKCVLEEDTYSCDGVCSYCYVNCSYKLPPPSTH 65

Query: 67  HINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRR-RIRLPDPPPPET 126
                 SI     ++ LV S++      F LV CYAIY +FY+G RR R   P     ET
Sbjct: 66  R-----SISGKFLIAGLVLSSV------FFLVFCYAIYYKFYSGSRRGRSSQPQDQRNET 125

Query: 127 HHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFE 186
            H+ +FLDE+ GP+LDHP+WYI TIGL P+VI++I+VCK+K G+GL++GT+CSVCL+EFE
Sbjct: 126 THE-EFLDEDHGPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFE 185

Query: 187 EDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAAS---LPQLRPPAET 246
           EDETLRLLPKCSHAFH+PCIDTWLRSHTNCP+CRAP+VA SA A +S      L    ET
Sbjct: 186 EDETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEET 245

Query: 247 QIGELQREEGDGANL--GESSARTE-EEQEEQEEQETHFADEDLEERSSDMQPMRRSVSL 306
           +IG  + ++     L  G+   R   EE+ E E++ T    E L      +QP+RRSVSL
Sbjct: 246 RIGVSENDQESERELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSL 305

Query: 307 DSLSALRISSDFAN--------------VNEKMDSEAETIQRNGK---------KSSQGR 355
           DSLSA +IS    +              VNE   S     +R G           SS GR
Sbjct: 306 DSLSAFKISQALVSVCPVESDRNSRTGLVNESESSMEIVPKRVGSNQSLLKFMASSSIGR 365

[Close]
BLAST of CSPI07G06080 vs. TrEMBL
Match: A0A061E293_THECC (RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007414 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.8e-56
Identity = 165/392 (42.09%), Postives = 211/392 (53.83%), Query Frame = 1 

Query: 4   FSSRKLLSEDDDDHK-EFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHINPT 63
           F  RKL+S+  D+   ++C+DC       C + C + C   CY    P   P +D   P 
Sbjct: 3   FRHRKLMSDSTDETSPDYCEDCY-----RCYTSCNKLCPPACYKDPYPPPVPVSD---PA 62

Query: 64  SSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIY-ARFYAGRRRRIRLPDPPPPETHHQHD 123
           S  K+P+KL  ++T T+   +F   LVLCY IY  R   GR    R   P   ET  + +
Sbjct: 63  SDTKTPNKLL-IITFTVLAAAF---LVLCYYIYYVRCSRGRSNARRRSQPQTTET--RDE 122

Query: 124 FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETL 183
           FLDE+ GP++DHP WYI T+GL P++I++I VCK+K GEGL++GTECSVCL+EFEEDETL
Sbjct: 123 FLDEDHGPIIDHPFWYINTVGLQPSIINSITVCKYKRGEGLVEGTECSVCLNEFEEDETL 182

Query: 184 RLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRP-----PAETQI- 243
           RLLPKCSHAFH+PCIDTWLRSHTNCPMCRAP+V  +     S  ++         ETQ+ 
Sbjct: 183 RLLPKCSHAFHIPCIDTWLRSHTNCPMCRAPIVFNTVNRGPSSSEVNTEDSAVTEETQVI 242

Query: 244 -----GELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSL 303
                GE    E +G   G    R   EQEE+   E      +       +QPMRRSVSL
Sbjct: 243 IMEDDGEQHERETEG---GTRELRVRPEQEEELAVENERKTGESSGVEDGIQPMRRSVSL 302

Query: 304 DSLSALRISSDFAN-VNEKMDSEAETIQRNGKKSS-----------QG----RGHSSTSS 359
           DSL+A +IS   AN   E     ++     GK+SS           QG      HSS   
Sbjct: 303 DSLAASQISHAIANGFPEGSSGNSDNELAKGKESSVRIVTRRTAGNQGLLRLMCHSSMGR 362

[Close]
BLAST of CSPI07G06080 vs. TAIR10
Match: AT4G33565.1 (AT4G33565.1 RING/U-box superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 2.7e-43
Identity = 129/313 (41.21%), Postives = 173/313 (55.27%), Query Frame = 1 

Query: 32  CSSDCLEKCRDYCYNINIPIRPPDADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLC 91
           CSS CL++C   C  + I    P A+ I+   ++K    +S   +S I  L    LLVLC
Sbjct: 89  CSSYCLDECPSICEIVVISGLSPPAE-IHHDDNLKRILIIS--ASSIITTLFLLTLLVLC 148

Query: 92  YAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAI 151
           +    +FY  RRR I        E     DF D     ++DHPIW+IRTIGL P VI +I
Sbjct: 149 F----KFYYRRRRSITTSRRWSMEEARNWDF-DGPAPVIVDHPIWHIRTIGLNPTVISSI 208

Query: 152 AVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRA 211
            VC++   +G+++GT+CSVCLSEFEE+ETLRLLPKC HAFHL CIDTWLRSHTNCP+CRA
Sbjct: 209 KVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHAFHLYCIDTWLRSHTNCPLCRA 268

Query: 212 PVVAQSAAAAASLPQLRPPAETQIGELQREEGDGANLGESSARTEEEQEEQEEQETHFAD 271
           P+V     A   +       E     +  E GD           + ++E +EE++   ++
Sbjct: 269 PIV----EANTMIDDHSEGLEEISVMIPEENGD-----------DTDEEIEEERDGFVSN 328

Query: 272 EDLEERSSDMQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSS 331
              +   S  Q +RRSVSLDSLS LR+S         +  E E ++R G     GR    
Sbjct: 329 ISRDHGESQQQRVRRSVSLDSLSGLRVS------EVVVGREKEKLKR-GNNIGSGR---- 367

Query: 332 TSSMNRSVSCSGK 345
           +S + RS+S SGK
Sbjct: 389 SSLLKRSISYSGK 367

[Close]
BLAST of CSPI07G06080 vs. TAIR10
Match: AT5G10380.1 (AT5G10380.1 RING/U-box superfamily protein)

HSP 1 Score: 148.3 bits (373), Expect = 9.2e-36
Identity = 75/148 (50.68%), Postives = 101/148 (68.24%), Query Frame = 1 

Query: 68  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQ 127
           P +LS L+ ++I ++  + +L L    +   +  ++RRI      P +T+ Q D  + E+
Sbjct: 35  PRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQRRISAASVTPGDTNQQEDEDETEE 94

Query: 128 GPVLD-HPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPK 187
               D H +W I T+GL  + I++I V  FK GEG+IDGTECSVCL+EFEEDE+LRLLPK
Sbjct: 95  RDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPK 154

Query: 188 CSHAFHLPCIDTWLRSHTNCPMCRAPVV 215
           CSHAFHL CIDTWL SH NCP+CRAPV+
Sbjct: 155 CSHAFHLNCIDTWLLSHKNCPLCRAPVL 181

[Close]
BLAST of CSPI07G06080 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32
Identity = 95/267 (35.58%), Postives = 146/267 (54.68%), Query Frame = 1 

Query: 23  DCRDYFSDS-CSSDCLEKCRDYCYNINIPIRPPDADHINPT-------SSIKSPHKLSNL 82
           DC +   D  C  +C  +  DY Y I+ P  PP +    P+       S++  P + S+ 
Sbjct: 22  DCSNGVCDPICPYNCYPE-PDY-YTIS-PQLPPWSSSPQPSPCPSPSISAVYLPSQDSSS 81

Query: 83  VTSTIALLSFT----FLLVLCYAIYARFYAGRRRRIRL----PDPPPPETHHQHDFLDEE 142
               I++++ T     +L+  + + A+F++    R+       D    +T  + +F D E
Sbjct: 82  SLDAISIITITGAVLAILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDTVMEEEFQDRE 141

Query: 143 QGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPK 202
           Q   +DHPIW IRT GL  ++I++I +C +K G+GLI+ T+C VCL+EFEEDE+LRLLPK
Sbjct: 142 Q---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFEEDESLRLLPK 201

Query: 203 CSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQREEGDGA 262
           C+HAFH+ CIDTWL SHTNCP+CRA +    A  + + P+   P E   G      G G+
Sbjct: 202 CNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGPVEVTPG------GSGS 261

Query: 263 NLGESSARTEEEQEEQEEQETHFADED 274
           +L       E+  E +   ++ F + D
Sbjct: 262 HLENDGVDEEDHGEIENRVDSDFKESD 272

[Close]
BLAST of CSPI07G06080 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 112.8 bits (281), Expect = 4.3e-25
Identity = 108/348 (31.03%), Postives = 161/348 (46.26%), Query Frame = 1 

Query: 26  DYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHINPTSSIKSPHKLSNLVTSTIALLSFT 85
           D ++D     C   C  +CY I  P  PP +  ++  SS  S    S L+ + I +L+  
Sbjct: 12  DSYNDCSQGICNIYCPQWCYLIFPP--PPPSFFLDDDSS-SSSSSFSPLLIALIGILTSA 71

Query: 86  FLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIRTIGLPP 145
            +LV  Y + +++    R             H+   F    Q    +         GL  
Sbjct: 72  LILVSYYTLISKYC--HRHHQTSSSETLNLNHNGEGFFSSTQRISTNGD-------GLNE 131

Query: 146 AVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTN 205
           ++I +I V K+KSG+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPCIDTWL+SH+N
Sbjct: 132 SMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSN 191

Query: 206 CPMCRAPV---------VAQSAAAAASLPQLRPPAETQIGEL-------QREEGDGANLG 265
           CP+CRA V         V Q+ +   +           + E+       + + GD  ++ 
Sbjct: 192 CPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVV 251

Query: 266 ESSARTEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISSDFANVNEKM 325
                    +      E    +E  E +  D  P+RRSVSL+S   + I+     +    
Sbjct: 252 VIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREIE--- 311

Query: 326 DSEAE-----TIQRNGK-KSSQGRGHSSTSSMNRSVSCSGKFLMRSST 352
           D E E     T QR  + +   G+    T +  RS   SG F+   ST
Sbjct: 312 DEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLST 344

[Close]
BLAST of CSPI07G06080 vs. TAIR10
Match: AT1G23980.1 (AT1G23980.1 RING/U-box superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-22
Identity = 55/149 (36.91%), Postives = 87/149 (58.39%), Query Frame = 1 

Query: 62  TSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHD 121
           +SS    +++S ++   I LLS  F +     +  R+Y  +++R  L   P  E++   +
Sbjct: 40  SSSSGGNNRISPIILFIIVLLSVIFFICSILHLLVRYYL-KKKRSNLSSSPN-ESNQNPE 99

Query: 122 FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETL 181
           F D +        ++++   GL  A+IDA+ V  +K  +G  +  +C+VCL EF ED+ L
Sbjct: 100 FSDSDTYQRQLQQLFHLHDSGLDQALIDALPVFLYKEIKGTKEPFDCAVCLCEFSEDDKL 159

Query: 182 RLLPKCSHAFHLPCIDTWLRSHTNCPMCR 211
           RLLP CSHAFH+ CIDTWL S++ CP+CR
Sbjct: 160 RLLPNCSHAFHIDCIDTWLLSNSTCPLCR 186

[Close]
BLAST of CSPI07G06080 vs. NCBI nr
Match: gi|449438582|ref|XP_004137067.1| (PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus])

HSP 1 Score: 699.1 bits (1803), Expect = 4.0e-198
Identity = 357/360 (99.17%), Postives = 358/360 (99.44%), Query Frame = 1 

Query: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60
           MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120
           PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120

Query: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180
           DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAAS PQLRPPAETQIGELQR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISS 300
           EEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSD+QPMRRSVSLDSLSALRISS
Sbjct: 241 EEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 300

Query: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSGKFLMRSSTQINTESNYS 360
           DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCS KFLMRSSTQINTESNYS
Sbjct: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS 360

[Close]
BLAST of CSPI07G06080 vs. NCBI nr
Match: gi|659110255|ref|XP_008455131.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 615.1 bits (1585), Expect = 7.5e-173
Identity = 325/363 (89.53%), Postives = 340/363 (93.66%), Query Frame = 1 

Query: 1   MDFFSSRKLLSEDD--DDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADH 60
           MDF SSRKLLS DD  DD K+ CKDC DY S SC S CLEKC++YCY I+IPI PPDAD 
Sbjct: 1   MDFLSSRKLLSSDDEDDDLKKLCKDCFDYSSYSCPSYCLEKCKNYCY-IHIPIPPPDADD 60

Query: 61  INPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHH 120
           IN TSS KSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFY+GRRRRIRLPDPPPPETHH
Sbjct: 61  INQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRRRIRLPDPPPPETHH 120

Query: 121 QHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180
           QH+FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED
Sbjct: 121 QHEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180

Query: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGEL 240
           ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS+AAAAS P  RPPAETQIGEL
Sbjct: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSSAAAASPPPPRPPAETQIGEL 240

Query: 241 QREEGDGANLGESSARTEEEQEEQ-EEQETHFADEDLEERSSDMQPMRRSVSLDSLSALR 300
           QREEGDGANLGESSAR EEEQE+Q EE+ETHFADEDLEERSSD+QP+RRSVSLDSLSALR
Sbjct: 241 QREEGDGANLGESSARNEEEQEQQHEEEETHFADEDLEERSSDIQPVRRSVSLDSLSALR 300

Query: 301 ISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSGKFLMRSSTQINTES 360
           ISS FANVNEK+DS+AETIQR GKKSSQGRG+SSTSSMNRSVSCSGKFLMRSSTQINTE+
Sbjct: 301 ISSVFANVNEKLDSDAETIQRKGKKSSQGRGYSSTSSMNRSVSCSGKFLMRSSTQINTET 360

[Close]
BLAST of CSPI07G06080 vs. NCBI nr
Match: gi|702390666|ref|XP_010065673.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis])

HSP 1 Score: 259.6 bits (662), Expect = 8.0e-66
Identity = 168/332 (50.60%), Postives = 214/332 (64.46%), Query Frame = 1 

Query: 32  CSSDCLEKCRDYCYNI--NIPIRPPDADHINPTSSIK---SPHKLSNLVTSTIALLSFTF 91
           C + CL+ C D C      +P+ PP      P S       PH LS  +    A L+  F
Sbjct: 38  CITPCLDVCPDVCRQPIPPLPLPPPCPPEDEPPSLDAYGGRPHHLSPFLIPLFAALAALF 97

Query: 92  LLVLCYAIYARFYAGRRR-RIRLPDPPPPETHHQHD-FLDEEQGPVLDHPIWYIRTIGLP 151
           +LV+CYA+YAR+Y+GR R R R P    PET   HD FLD +QGPVLDHPIWYIRT+GLP
Sbjct: 98  VLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDHDQGPVLDHPIWYIRTVGLP 157

Query: 152 PAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHT 211
           P+VI AI  CK+K GEGLI+GTECSVCLSEF+EDETLRLLPKC+HAFH+PCIDTWLRSHT
Sbjct: 158 PSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLPKCNHAFHVPCIDTWLRSHT 217

Query: 212 NCPMCRAPVVAQSAAAAASLPQLRPPAET--QIGELQREEGDGANLGESSARTEE---EQ 271
           NCP+CRAP+V     AA +LP  RP AE+    GE+  +E D   LG  + R  E   E 
Sbjct: 218 NCPLCRAPIV---TIAAQALPPERPNAESSASAGEMGIQEVDD-GLGREAERIAEPRGES 277

Query: 272 EEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRN 331
           EE  E +     + +E+ S+++QPMRRSVSLDSLSAL+IS   AN    +  E+ + +++
Sbjct: 278 EEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISLAVANA---LRGESGSSRKS 337

Query: 332 GKK-SSQGRGHSSTSSMNRSVSCSGKFLMRSS 351
           G + + +  G + T    R+ SC  K  MRS+
Sbjct: 338 GPELAGENHGIALTIVPKRNASCE-KQPMRST 361

[Close]
BLAST of CSPI07G06080 vs. NCBI nr
Match: gi|566179440|ref|XP_002310500.2| (hypothetical protein POPTR_0007s03610g, partial [Populus trichocarpa])

HSP 1 Score: 235.3 bits (599), Expect = 1.6e-58
Identity = 140/289 (48.44%), Postives = 184/289 (63.67%), Query Frame = 1 

Query: 70  KLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGP 129
           KLS +  + I L   T +L  CYAIYA+F   RRRR    +        +  F DE++G 
Sbjct: 11  KLSKIALAMIVLSVITSVLATCYAIYAKFIRPRRRRSTQREEEAEIIETRDQFADEDEGR 70

Query: 130 VLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSH 189
           V+DHPIWYIRT+GL P+VI +I V K+KSG+GL++GTECSVCLSEF++DETLRLLPKCSH
Sbjct: 71  VVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLLPKCSH 130

Query: 190 AFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASLPQLRPPAETQIGELQREEGDGANLG 249
           AFH+PCIDTWLRSHTNCP+CRAP+V  +A A +S   L   +  +   ++  E D  +  
Sbjct: 131 AFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEVSEEDQESSR 190

Query: 250 ESSAR-------TEEEQEEQEEQETHFADEDLEERSSDMQPMRRSVSLDSLSALRISSDF 309
           E   R       TEEE E Q E      +E++EE    +QP+RRSVSLDSLSA +I    
Sbjct: 191 EMEGRDGGVRVVTEEESELQSENLNEEEEEEVEEEDG-IQPLRRSVSLDSLSAFKIIQAL 250

Query: 310 ANVNEKMDSE--AETIQRNGKKSSQGRG--HSSTSSMNRSVSCSGKFLM 348
           ANV+  ++S+  + T +  G   S G    +   SS+ RS+SCSGKF +
Sbjct: 251 ANVHPAVESDRNSGTRRAGGGDGSSGESVQNRGPSSLKRSISCSGKFFL 298

[Close]
BLAST of CSPI07G06080 vs. NCBI nr
Match: gi|255563198|ref|XP_002522602.1| (PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis])

HSP 1 Score: 235.0 bits (598), Expect = 2.1e-58
Identity = 171/389 (43.96%), Postives = 216/389 (55.53%), Query Frame = 1 

Query: 7   RKLLSEDDDDHKEFCKDCRDYFSDSCSSDCL--------EKCRDYCY-NINIPIRPPDAD 66
           RKLL   DD + E         S  CSS C+        +    YCY N +  + PP   
Sbjct: 6   RKLL---DDSYNETA------LSKICSSKCVLEEDTYSCDGVCSYCYVNCSYKLPPPSTH 65

Query: 67  HINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRR-RIRLPDPPPPET 126
                 SI     ++ LV S++      F LV CYAIY +FY+G RR R   P     ET
Sbjct: 66  R-----SISGKFLIAGLVLSSV------FFLVFCYAIYYKFYSGSRRGRSSQPQDQRNET 125

Query: 127 HHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFE 186
            H+ +FLDE+ GP+LDHP+WYI TIGL P+VI++I+VCK+K G+GL++GT+CSVCL+EFE
Sbjct: 126 THE-EFLDEDHGPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFE 185

Query: 187 EDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAAS---LPQLRPPAET 246
           EDETLRLLPKCSHAFH+PCIDTWLRSHTNCP+CRAP+VA SA A +S      L    ET
Sbjct: 186 EDETLRLLPKCSHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEET 245

Query: 247 QIGELQREEGDGANL--GESSARTE-EEQEEQEEQETHFADEDLEERSSDMQPMRRSVSL 306
           +IG  + ++     L  G+   R   EE+ E E++ T    E L      +QP+RRSVSL
Sbjct: 246 RIGVSENDQESERELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSL 305

Query: 307 DSLSALRISSDFAN--------------VNEKMDSEAETIQRNGK---------KSSQGR 355
           DSLSA +IS    +              VNE   S     +R G           SS GR
Sbjct: 306 DSLSAFKISQALVSVCPVESDRNSRTGLVNESESSMEIVPKRVGSNQSLLKFMASSSIGR 365

The following BLAST results are available for this feature:
BLAST of CSPI07G06080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL55_ARATH1.6e-3450.68E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1[more]
ATL54_ARATH2.2e-3135.58RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2[more]
ATL52_ARATH7.6e-2431.03RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1[more]
ATL41_ORYSJ1.2e-2132.45E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04... [more]
ATL47_ARATH6.0e-2136.91RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2 SV=1[more]
BLAST of CSPI07G06080 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2P1_CUCSA2.8e-19899.17Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1[more]
A0A059BC62_EUCGR5.6e-6650.60Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1[more]
B9HEH8_POPTR1.1e-5848.44Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g P... [more]
B9S9D3_RICCO1.5e-5843.96Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1[more]
A0A061E293_THECC1.8e-5642.09RING/U-box superfamily protein, putative OS=Theobroma cacao GN=TCM_007414 PE=4 S... [more]
BLAST of CSPI07G06080 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G33565.12.7e-4341.21 RING/U-box superfamily protein[more]
AT5G10380.19.2e-3650.68 RING/U-box superfamily protein[more]
AT1G72220.11.2e-3235.58 RING/U-box superfamily protein[more]
AT5G17600.14.3e-2531.03 RING/U-box superfamily protein[more]
AT1G23980.13.4e-2236.91 RING/U-box superfamily protein[more]
BLAST of CSPI07G06080 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449438582|ref|XP_004137067.1|4.0e-19899.17PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus][more]
gi|659110255|ref|XP_008455131.1|7.5e-17389.53PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|702390666|ref|XP_010065673.1|8.0e-6650.60PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis][more]
gi|566179440|ref|XP_002310500.2|1.6e-5848.44hypothetical protein POPTR_0007s03610g, partial [Populus trichocarpa][more]
gi|255563198|ref|XP_002522602.1|2.1e-5843.96PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G06080.1CSPI07G06080.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 167..210
score: 1.1
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 168..209
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 168..210
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 165..214
score: 8.5
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 29..236
score: 1.4
NoneNo IPR availablePANTHERPTHR14155:SF101SUBFAMILY NOT NAMEDcoord: 29..236
score: 1.4
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 162..216
score: 9.09

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G06080Cla012901Watermelon (97103) v1cpiwmB575
CSPI07G06080Csa7G066300Cucumber (Chinese Long) v2cpicuB354
CSPI07G06080MELO3C018588Melon (DHL92) v3.5.1cpimeB538
CSPI07G06080ClCG09G015940Watermelon (Charleston Gray)cpiwcgB541
CSPI07G06080Lsi03G007300Bottle gourd (USVL1VR-Ls)cpilsiB531
CSPI07G06080MELO3C018588.2Melon (DHL92) v3.6.1cpimedB523
CSPI07G06080CsaV3_7G007060Cucumber (Chinese Long) v3cpicucB415
CSPI07G06080Cla97C09G177750Watermelon (97103) v2cpiwmbB584
CSPI07G06080Bhi05G000739Wax gourdcpiwgoB686
CSPI07G06080Cucsa.218410Cucumber (Gy14) v1cgycpiB336
CSPI07G06080CmaCh11G016590Cucurbita maxima (Rimu)cmacpiB153
CSPI07G06080CmoCh11G014770Cucurbita moschata (Rifu)cmocpiB133
CSPI07G06080Cp4.1LG04g07030Cucurbita pepo (Zucchini)cpecpiB694
CSPI07G06080Cp4.1LG15g03610Cucurbita pepo (Zucchini)cpecpiB265
CSPI07G06080CsGy7G005760Cucumber (Gy14) v2cgybcpiB332
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G06080Wax gourdcpiwgoB659
CSPI07G06080Wax gourdcpiwgoB672
CSPI07G06080Cucurbita maxima (Rimu)cmacpiB143
CSPI07G06080Cucurbita maxima (Rimu)cmacpiB534
CSPI07G06080Cucurbita moschata (Rifu)cmocpiB525
CSPI07G06080Cucurbita moschata (Rifu)cmocpiB777
CSPI07G06080Watermelon (Charleston Gray)cpiwcgB561
CSPI07G06080Watermelon (97103) v1cpiwmB574
CSPI07G06080Watermelon (97103) v1cpiwmB594
CSPI07G06080Cucurbita pepo (Zucchini)cpecpiB258
CSPI07G06080Cucurbita pepo (Zucchini)cpecpiB472
CSPI07G06080Cucurbita pepo (Zucchini)cpecpiB697
CSPI07G06080Bottle gourd (USVL1VR-Ls)cpilsiB534
CSPI07G06080Bottle gourd (USVL1VR-Ls)cpilsiB536
CSPI07G06080Silver-seed gourdcarcpiB0323
CSPI07G06080Silver-seed gourdcarcpiB0414
CSPI07G06080Silver-seed gourdcarcpiB0767
CSPI07G06080Watermelon (97103) v2cpiwmbB542