CsaV3_7G007060 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G007060
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	RING-H2 finger protein
Location	chr7 : 4401843 .. 4404873 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTCAATTGGATGGATTTGAGAAATTTTAAAATCTAGAATTTACAAAAAGTAGGGTTGAACCGATTGGATCCACCACCGACCTGACTCCGACTAATGATCACCCTAGGATCAAGTCAGCCTCGTAGCCTTGATTTAAGGCAATTGTCATATGAGTCATTATTTAGTAGTGGGCCGCATAAGGCCCAAAAGCATTAAGTAAAAACCTTGACTCAATCCTCATCTCCATTTCCATAGCCGAAAAAGTCAATAATGAAGACAAAACAAATCAAAACAAAACAAAATCCGATTACCATTAAAACTAAACACATTCAAAACTTTCGGTGACCTACTTCCTCAAGCCACTCCATCTCCTCCTGCCGCCTGATTTTTCAACATTTCAACTCCTCTTTTCTTCAAATCCCCCATGGATTTCTTCTCCTCCAGAAAGCTTCTCTCCGAGGACGACGATGACCACAAGGAATTCTGCAAAGACTGCCGCGATTACTTTTCCGATTCTTGCTCTTCCGATTGCCTCGAAAAATGCCGCGATTACTGCTATAATATCAATATTCCAATCCGACCACCAGACGCTGATCATATCAATCCCACTTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACACGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCCGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATTCAGCCAATGAGAAGATCTGTATCTTTAGATTCTCTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGCGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGAGCTGTTTTTCTTTTTGTCTTTCTTCTTCTTTTTGTGATATCTCTGAAGATGGAGATGTCTATACAAACAAACTCTCAGAAAGCTGAGAGGTTTCAAAGGCTGTTCTTGTTTTTGTCAAATACAGGTGATATGAAAAGATCAATGGTATATAATATATGCATACAAAGTTGAAATATGTTTCTTGTGAAATGTTCTGACTCTGGATGTTGTGATTACTTTACAACTCTATCATGCTTTCTCAATTACATGATTATAAGCAGAGTAAATCAATATTATCATTCAACAGAACTTAACTAAGACGATGTTTGTTTGTTTTTTAGTTACTGAGTGAGTAAATCTTGGCATGAAATCATCAAATTTCTCAATAATTTTTTTGTTAATATCTTAATTTATATACGTTTTTGGTAGTTTGATTACGTTTTTAACGATCTCAATGTGCCTTTTGGTTTTTTTCATTCAGTATTCCTAGTGATTATTTCGTTCATTCATCTAGGATTCAATCAAACCCCTCGAAACGAAGAACTTTTGACCTTTAGCCCAGAAAATCATACCTATTATCCTTGTAGTAAAACAACTTTGAAACAAAGGATAGAAAGTCATACCAATTAACCTTTTAGGATGATAGGAGAAGTAATTAGTTATTATAGTCCAGTTTATTATGGTCGGTTACCTTGTTTTAGTTTGAGTTACAAAATTTTAGTCTAAAGAACAAAAAAGTGCTGAATGTATACAGAAAAAATTGTAAATAATGAGGTATTCTGAAATAGGATTGATGTAGCTAATTTATGAGGACTAAATAGTATCTATTATAGCAAGAGGTAGTTATTATAGTTTTGGATAATCTCAAACGCCCTCTGCCAATCTAATAGTGGGAATGAGTACTTCACATTGTTAGATACTCCTTTCCACCTATAATAAATGGAGATGATATGAAAAACATTTTGTACTATTGTTGTACTAAACGTTTTTCATGTGATATATTACTCAAACGACAACTAAATATATATCAAATGCAAGTATAGGTCGTCTTGACCACAAGTCTATCCCATAAACATGCTCTTGAAGAAGCTTCCCCACTTCCATAACCACAATGTTTATAATGCCACAATGTTTATAATGCTATTGTATTCCCAAATGGCTAATAATATTGTTAGATGGCATGGTTTGCTCTATACTAATTTAGATCTTTGAGTCAATTATTTAGTTTCAATTAGTTGTTTGGCCCTTGGACTTAAATTGGTGTTATATAACTTAACTACAATAGTGAACATTATTGAAGCTCACATTTATCGAAATACTTCACATTATCTTCTCTTTCGTGTACATTTGAACTTTATCTAACAATTCATCCAAATACAAACATTTTTACCTCTAACATATTAATTTCAGACTTCATAACCCAACTCATTGTACAAACATCACTTTGTCATATTTGAACTCATGTTTCAAGAAACTATTTCATTATAAATAAGCTCTTAGTAGCAAAATGTCAAACTGGACAGCTCAATAACAAGATCTAGAAAGATTAACCACCGATACAAAAAC

mRNA sequence

ATGGATTTCTTCTCCTCCAGAAAGCTTCTCTCCGAGGACGACGATGACCACAAGGAATTCTGCAAAGACTGCCGCGATTACTTTTCCGATTCTTGCTCTTCCGATTGCCTCGAAAAATGCCGCGATTACTGCTATAATATCAATATTCCAATCCGACCACCAGACGCTGATCATATCAATCCCACTTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACACGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCCGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATTCAGCCAATGAGAAGATCTGTATCTTTAGATTCTCTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGCGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGA

Coding sequence (CDS)

ATGGATTTCTTCTCCTCCAGAAAGCTTCTCTCCGAGGACGACGATGACCACAAGGAATTCTGCAAAGACTGCCGCGATTACTTTTCCGATTCTTGCTCTTCCGATTGCCTCGAAAAATGCCGCGATTACTGCTATAATATCAATATTCCAATCCGACCACCAGACGCTGATCATATCAATCCCACTTCCTCCATTAAATCGCCTCACAAACTCTCCAACCTGGTTACCTCCACCATCGCCCTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGCTATGCCATCTACGCCCGTTTCTACGCCGGCCGCCGTAGACGGATTCGCCTCCCCGATCCCCCACCGCCTGAGACCCATCACCAACACGACTTTCTGGATGAAGAACAGGGCCCTGTTTTGGATCATCCCATCTGGTACATCCGCACCATCGGCCTCCCTCCGGCTGTAATCGACGCCATCGCCGTCTGTAAGTTCAAATCTGGTGAGGGTTTGATTGATGGAACAGAGTGCTCTGTTTGTTTGAGTGAATTTGAAGAGGATGAAACCTTGAGGCTTTTGCCTAAGTGCAGCCATGCTTTTCATCTCCCATGTATCGATACTTGGCTTCGATCTCATACCAATTGCCCCATGTGCCGTGCTCCAGTTGTAGCTCAGTCCGCCGCCGCCGCCGCTTCTCCGCCACAGCTACGGCCTCCGGCGGAAACCCAGATAGGGGAATTGCAAAGGGAAGAGGGAGATGGAGCCAATTTGGGGGAAAGTTCTGCCAGAACTGAAGAAGAACAAGAAGAACAAGAAGAACAAGAAACCCATTTTGCTGATGAAGATTTAGAAGAAAGAAGCAGTGATATTCAGCCAATGAGAAGATCTGTATCTTTAGATTCTCTATCAGCTCTTAGAATCAGCTCAGATTTTGCTAATGTTAATGAAAAAATGGATTCTGAAGCTGAAACAATACAGAGAAATGGGAAGAAATCATCACAAGGGAGAGGCCATTCTTCTACTTCTTCTATGAACAGGTCAGTTTCTTGTAGTGCGAAGTTTCTAATGAGAAGCTCCACTCAGATAAATACTGAATCTAATTACAGTTGA

Protein sequence

MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLGESSARTEEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS

Homology

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BLAST of CsaV3_7G007060 vs. NCBI nr
Match: XP_004137067.1 (PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus] >KGN43773.1 hypothetical protein Csa_7G066300 [Cucumis sativus])

HSP 1 Score: 653.7 bits (1685), Expect = 3.7e-184
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60
           MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQH 120
           PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQH
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQH 120

Query: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180
           DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 300
           EEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISS
Sbjct: 241 EEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 300

Query: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS 360
           DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS
Sbjct: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS 360

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BLAST of CsaV3_7G007060 vs. NCBI nr
Match: XP_008455131.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 505.0 bits (1299), Expect = 2.1e-139
Identity = 301/363 (82.92%), Postives = 312/363 (85.95%), Query Frame = 0


Query: 1   MDFFSSRKLLSEDDDDH--KEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADH 60
           MDF SSRKLLS DD     K+ CKDC DY S SC S CLEKC++YCY I+IPI PPDAD 
Sbjct: 1   MDFLSSRKLLSSDDXXXXLKKLCKDCFDYSSYSCPSYCLEKCKNYCY-IHIPIPPPDADD 60

Query: 61  INPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXX 120
           IN TSS KSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFY+GRR   XXXXXXXXXXXX
Sbjct: 61  INQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRXXXXXXXXXXXXXXX 120

Query: 121 QHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180
             +FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED
Sbjct: 121 XXEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180

Query: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGEL 240
           ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPV                   TQIGEL
Sbjct: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVXXXXXXXXXXXXXXXXXXXTQIGEL 240

Query: 241 QREEGDGANLGE-SSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALR 300
           QREEGDGANLGE     XXXXXXXXXXXXX FADEDLEERSSDIQP+RRSVSLDSLSALR
Sbjct: 241 QREEGDGANLGEXXXXXXXXXXXXXXXXXXXFADEDLEERSSDIQPVRRSVSLDSLSALR 300

Query: 301 ISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTES 360
           ISS FANVNEK+DS+AETIQR GKKSSQGRG+SSTSSMNRSVSCS KFLMRSSTQINTE+
Sbjct: 301 ISSVFANVNEKLDSDAETIQRKGKKSSQGRGYSSTSSMNRSVSCSGKFLMRSSTQINTET 360

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BLAST of CsaV3_7G007060 vs. NCBI nr
Match: XP_022971987.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima])

HSP 1 Score: 372.5 bits (955), Expect = 1.7e-99
Identity = 233/352 (66.19%), Postives = 250/352 (71.02%), Query Frame = 0


Query: 1   MDFFSSRKLLSED-DDDHKEFC-KDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADH 60
           MDF SSRKLLS+D DDD  +FC +DC D+ SDSC SDCLEKC   C  I+I I PPD D+
Sbjct: 1   MDFLSSRKLLSDDSDDDLNKFCPEDCFDHPSDSCFSDCLEKCPTLCSYISISIPPPDFDN 60

Query: 61  INPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXX 120
            NP+S+ KSPHKLSNLVT TIALLSFTFLLVLCYA+YARFY+      XXXXXXXXXXXX
Sbjct: 61  FNPSSAAKSPHKLSNLVTLTIALLSFTFLLVLCYAVYARFYSA-----XXXXXXXXXXXX 120

Query: 121 QHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180
                     PVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED
Sbjct: 121 XXXXXXXXXXPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180

Query: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGEL 240
           ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCR+PVVA S    A P          +  L
Sbjct: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRSPVVAHS----APPTXXXXXXXXXMANL 240

Query: 241 QREEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRI 300
           Q    +GAN GESS R                ++D     SD Q MRRSVSLD  SALRI
Sbjct: 241 QXXXXNGANSGESSMRN--------------EEQDEIHLESDNQAMRRSVSLDLPSALRI 300

Query: 301 SSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSS 351
           SS  A VNEKMD E E+ QRNG  S +  G     SMNRSVSCS  FLMRSS
Sbjct: 301 SSVLAVVNEKMDWEGESEQRNGNCSEKSEG-----SMNRSVSCSGGFLMRSS 324

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BLAST of CsaV3_7G007060 vs. NCBI nr
Match: XP_022952906.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata])

HSP 1 Score: 341.7 bits (875), Expect = 3.1e-90
Identity = 221/352 (62.78%), Postives = 238/352 (67.61%), Query Frame = 0


Query: 1   MDFFSSRKLLSED-DDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYN-INIPIRPPDADH 60
           MDF SSRKLLS+D DDD  +FC                          I+  I PPD D 
Sbjct: 1   MDFLSSRKLLSDDADDDLNKFCPXXXXXXXXXXXXXXXXXXXXXXXXYISTSIPPPDFDD 60

Query: 61  INPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXX 120
            NP+S+ KSPHKLSNLVT TIALLSFTFLLVLCYA+YARFY+      XXXXXXXXXXXX
Sbjct: 61  FNPSSAAKSPHKLSNLVTLTIALLSFTFLLVLCYAVYARFYSA-----XXXXXXXXXXXX 120

Query: 121 QHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180
                     PVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED
Sbjct: 121 XXXXXXXXXXPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180

Query: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGEL 240
           ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVA SA    +PP+    AETQ+  L
Sbjct: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAHSAPPTPTPPR----AETQMANL 240

Query: 241 QREEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRI 300
           Q EE + AN GE+S R                ++D     SD Q MRRSVSLD  SAL+I
Sbjct: 241 QEEEENAANSGENSTRN--------------EEQDEIHLESDNQAMRRSVSLDLPSALQI 300

Query: 301 SSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSS 351
           SS    VNEKMD E E+ QRNG  S +  G     SMNRSVSCS  FLMRSS
Sbjct: 301 SSVLGVVNEKMDWEGESEQRNGNCSEKSEG-----SMNRSVSCSGGFLMRSS 324

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BLAST of CsaV3_7G007060 vs. NCBI nr
Match: XP_023554710.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 304.3 bits (778), Expect = 5.5e-79
Identity = 206/352 (58.52%), Postives = 220/352 (62.50%), Query Frame = 0


Query: 1   MDFFSSRKLLSEDDDD--HKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADH 60
           MDF SSRKLLS+D D+  +K                            I+  I PPD D 
Sbjct: 1   MDFLSSRKLLSDDADEDLNKFXXXXXXXXXXXXXXXXXXXXXXXXXXYISTSIPPPDFDD 60

Query: 61  INPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXX 120
            N +S+ KSPHKLSNLVT TIALLSFTFLLVLCYA+YARFY+      XXXXXXXXXXXX
Sbjct: 61  FNLSSAAKSPHKLSNLVTLTIALLSFTFLLVLCYAVYARFYSA-----XXXXXXXXXXXX 120

Query: 121 QHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180
                    GPVLDHPIWYIRTIGLPPAVID IAVCKFKSGEGLIDGTECSVCLSEFEED
Sbjct: 121 XXXXXXXXXGPVLDHPIWYIRTIGLPPAVIDTIAVCKFKSGEGLIDGTECSVCLSEFEED 180

Query: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGEL 240
           ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVA S    A P              
Sbjct: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAHS----APPTXXXXXXXXXXXXX 240

Query: 241 QREEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRI 300
                     GE+S R                ++D     SD Q MRRSVSLD  SAL+I
Sbjct: 241 XXXXXXXXXSGENSTRN--------------EEQDEIHLESDNQAMRRSVSLDLPSALQI 300

Query: 301 SSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSS 351
           SS    VNEKMD E E+ QRNG  S +  G     SMNRSVSCS  FLMRSS
Sbjct: 301 SSVLGVVNEKMDWEGESEQRNGNFSEKSEG-----SMNRSVSCSGGFLMRSS 324

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BLAST of CsaV3_7G007060 vs. TAIR10
Match: AT4G33565.1 (RING/U-box superfamily protein)

HSP 1 Score: 152.9 bits (385), Expect = 3.7e-37
Identity = 95/215 (44.19%), Postives = 123/215 (57.21%), Query Frame = 0


Query: 130 VLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSH 189
           ++DHPIW+IRTIGL P VI +I VC++   +G+++GT+CSVCLSEFEE+ETLRLLPKC H
Sbjct: 179 IVDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKH 238

Query: 190 AFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQREEGDGANLG 249
           AFHL CIDTWLRSHTNCP+CRAP+V  +         L    E     +  E GD  +  
Sbjct: 239 AFHLYCIDTWLRSHTNCPLCRAPIVEANTMIDDHSEGL----EEISVMIPEENGDDTDEE 298

Query: 250 ESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANVNEKM 309
               R               ++   +   S  Q +RRSVSLDSLS LR+S         +
Sbjct: 299 IEEER-----------DGFVSNISRDHGESQQQRVRRSVSLDSLSGLRVS------EVVV 358

Query: 310 DSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAK 345
             E E ++R G     GR    +S + RS+S S K
Sbjct: 359 GREKEKLKR-GNNIGSGR----SSLLKRSISYSGK 367

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BLAST of CsaV3_7G007060 vs. TAIR10
Match: AT1G72220.1 (RING/U-box superfamily protein)

HSP 1 Score: 139.4 bits (350), Expect = 4.3e-33
Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRI----XXXXXXXXXX 120
           P+    S     +++T T A+L+   +L+  + + A+F++    R+              
Sbjct: 72  PSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDT 131

Query: 121 XXQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFE 180
             + +F D EQ   +DHPIW IRT GL  ++I++I +C +K G+GLI+ T+C VCL+EFE
Sbjct: 132 VMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFE 191

Query: 181 EDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAE-TQI 240
           EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +    A  + + P+   P E T  
Sbjct: 192 EDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGPVEVTPG 251

Query: 241 GELQREEGDGAN 248
           G     E DG +
Sbjct: 252 GSGSHLENDGVD 253

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BLAST of CsaV3_7G007060 vs. TAIR10
Match: AT5G10380.1 (RING/U-box superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 4.7e-32
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 133 HPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFH 192
           H +W I T+GL  + I++I V  FK GEG+IDGTECSVCL+EFEEDE+LRLLPKCSHAFH
Sbjct: 100 HHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFH 159

Query: 193 LPCIDTWLRSHTNCPMCRAPVV 215
           L CIDTWL SH NCP+CRAPV+
Sbjct: 160 LNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of CsaV3_7G007060 vs. TAIR10
Match: AT5G17600.1 (RING/U-box superfamily protein)

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25
Identity = 82/232 (35.34%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 142 GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 201
           GL  ++I +I V K+KSG+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPCIDTWL+
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175

Query: 202 SHTNCPMCRAPV---------VAQSAAAAASPPQLRPPAETQIGEL-------QREEGDG 261
           SH+NCP+CRA V         V Q+ +   +           + E+       + + GD 
Sbjct: 176 SHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDF 235

Query: 262 ANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANV 321
            ++                      +E  E +  D  P+RRSVSL+S   + I+     +
Sbjct: 236 DSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREI 295

Query: 322 NEKMDSEAE-----TIQRNGK-KSSQGRGHSSTSSMNRSVSCSAKFLMRSST 352
               D E E     T QR  + +   G+    T +  RS   S  F+   ST
Sbjct: 296 E---DEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLST 344

[Close]

BLAST of CsaV3_7G007060 vs. TAIR10
Match: AT3G03550.1 (RING/U-box superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 3.4e-22
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 0


Query: 142 GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 201
           GL  ++I +I V K++  +G ++ ++CSVCLSEF+E+E+LRLLPKC+HAFH+PCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 202 SHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQRE----EGDGANLGESSARXXX 261
           SH+NCP+CRA +V  SA               +I +L  +    E +  + G+ S     
Sbjct: 193 SHSNCPLCRAFIVTSSA--------------VEIVDLTNQQIVTENNSISTGDDSVVVVN 252

Query: 262 XXXXXXXXXXHFADEDLEERSSDIQPM-----RRSVSLDSLSALRISSDFANVNEKMDSE 321
                        +E    +  ++Q       RRS SL+S   +   +D   + E  D E
Sbjct: 253 LDLENSRSRNETVNEGSTPKPPEMQDSRDGEERRSASLNSGGGVVSIADI--LREIEDDE 312

Query: 322 AETIQRNGKKSSQGRGHS----STSSMNRSVSCSAKFLMRSSTQINTESNY 360
                   +   +G G      S S+ N++   S  FL+RSS      S Y
Sbjct: 313 ESAGVGTSRWVEEGEGEKTPPPSGSAANQTNGIS-NFLVRSSMAAMKRSGY 346

[Close]

BLAST of CsaV3_7G007060 vs. Swiss-Prot
Match: sp|Q8LFY8|ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 7.7e-32
Identity = 78/192 (40.62%), Postives = 114/192 (59.38%), Query Frame = 0


Query: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRI----XXXXXXXXXX 120
           P+    S     +++T T A+L+   +L+  + + A+F++    R+              
Sbjct: 72  PSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNEDNDT 131

Query: 121 XXQHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFE 180
             + +F D EQ   +DHPIW IRT GL  ++I++I +C +K G+GLI+ T+C VCL+EFE
Sbjct: 132 VMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCLNEFE 191

Query: 181 EDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAE-TQI 240
           EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +    A  + + P+   P E T  
Sbjct: 192 EDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGI----AMISVTTPRYSGPVEVTPG 251

Query: 241 GELQREEGDGAN 248
           G     E DG +
Sbjct: 252 GSGSHLENDGVD 253

[Close]

BLAST of CsaV3_7G007060 vs. Swiss-Prot
Match: sp|Q9LX93|ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.5e-31
Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 0


Query: 133 HPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFH 192
           H +W I T+GL  + I++I V  FK GEG+IDGTECSVCL+EFEEDE+LRLLPKCSHAFH
Sbjct: 100 HHVWQIPTVGLHRSAINSITVVGFKKGEGIIDGTECSVCLNEFEEDESLRLLPKCSHAFH 159

Query: 193 LPCIDTWLRSHTNCPMCRAPVV 215
           L CIDTWL SH NCP+CRAPV+
Sbjct: 160 LNCIDTWLLSHKNCPLCRAPVL 181

[Close]

BLAST of CsaV3_7G007060 vs. Swiss-Prot
Match: sp|Q7XLY8|ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 119.4 bits (298), Expect = 8.3e-26
Identity = 79/204 (38.73%), Postives = 105/204 (51.47%), Query Frame = 0


Query: 36  CLEKCRDYCYNINIPIRPPDADHINPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIY 95
           C   C  +CY I  P  PP  D    ++   S    S LV + I +L+  FLLV  Y   
Sbjct: 22  CSMYCPQWCYFIFPP--PPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLVSYYTFI 81

Query: 96  ARFYAG-----RRRRIXXXXXXXXXXXXQHDFLDEEQGPVLDHPIWYIR-TIGLPPAVID 155
           ++ Y G     R R         XXXXX              H  W +    GL   +I+
Sbjct: 82  SK-YCGTVSSLRGRVFGSSSGGAXXXXXXXXXXXXXXXXXXXHESWNVSPPSGLDETLIN 141

Query: 156 AIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMC 215
            I VCK++ G+G +  T+CSVCL EF + E+LRLLP+CSHAFH  CIDTWL+SH+NCP+C
Sbjct: 142 KITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLC 201

Query: 216 RAPVVAQSAAAAASPPQLRPPAET 234
           RA +   +   A+  P+   P ET
Sbjct: 202 RANITFVTVGLASPEPEGCAPGET 222

[Close]

BLAST of CsaV3_7G007060 vs. Swiss-Prot
Match: sp|Q9LF64|ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1)

HSP 1 Score: 113.6 bits (283), Expect = 4.5e-24
Identity = 82/232 (35.34%), Postives = 117/232 (50.43%), Query Frame = 0


Query: 142 GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 201
           GL  ++I +I V K+KSG+G +DG++CSVCLSEFEE+E+LRLLPKC+HAFHLPCIDTWL+
Sbjct: 116 GLNESMIKSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLK 175

Query: 202 SHTNCPMCRAPV---------VAQSAAAAASPPQLRPPAETQIGEL-------QREEGDG 261
           SH+NCP+CRA V         V Q+ +   +           + E+       + + GD 
Sbjct: 176 SHSNCPLCRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDF 235

Query: 262 ANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISSDFANV 321
            ++                      +E  E +  D  P+RRSVSL+S   + I+     +
Sbjct: 236 DSVVVIEDLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADVLREI 295

Query: 322 NEKMDSEAE-----TIQRNGK-KSSQGRGHSSTSSMNRSVSCSAKFLMRSST 352
               D E E     T QR  + +   G+    T +  RS   S  F+   ST
Sbjct: 296 E---DEEGESGGVGTSQRREEGEDGDGKTIPPTEANQRSGGVSGFFVRSLST 344

[Close]

BLAST of CsaV3_7G007060 vs. Swiss-Prot
Match: sp|Q9SRQ8|ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 6.1e-21
Identity = 76/231 (32.90%), Postives = 115/231 (49.78%), Query Frame = 0


Query: 142 GLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLR 201
           GL  ++I +I V K++  +G ++ ++CSVCLSEF+E+E+LRLLPKC+HAFH+PCIDTWL+
Sbjct: 133 GLDESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLK 192

Query: 202 SHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQRE----EGDGANLGESSARXXX 261
           SH+NCP+CRA +V  SA               +I +L  +    E +  + G+ S     
Sbjct: 193 SHSNCPLCRAFIVTSSA--------------VEIVDLTNQQIVTENNSISTGDDSVVVVN 252

Query: 262 XXXXXXXXXXHFADEDLEERSSDIQPM-----RRSVSLDSLSALRISSDFANVNEKMDSE 321
                        +E    +  ++Q       RRS SL+S   +   +D   + E  D E
Sbjct: 253 LDLENSRSRNETVNEGSTPKPPEMQDSRDGEERRSASLNSGGGVVSIADI--LREIEDDE 312

Query: 322 AETIQRNGKKSSQGRGHS----STSSMNRSVSCSAKFLMRSSTQINTESNY 360
                   +   +G G      S S+ N++   S  FL+RSS      S Y
Sbjct: 313 ESAGVGTSRWVEEGEGEKTPPPSGSAANQTNGIS-NFLVRSSMAAMKRSGY 346

[Close]

BLAST of CsaV3_7G007060 vs. TrEMBL
Match: tr|A0A0A0K2P1|A0A0A0K2P1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066300 PE=4 SV=1)

HSP 1 Score: 653.7 bits (1685), Expect = 2.5e-184
Identity = 360/360 (100.00%), Postives = 360/360 (100.00%), Query Frame = 0


Query: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60
           MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQH 120
           PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQH
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQH 120

Query: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180
           DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 300
           EEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISS
Sbjct: 241 EEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALRISS 300

Query: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS 360
           DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS
Sbjct: 301 DFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTESNYS 360

[Close]

BLAST of CsaV3_7G007060 vs. TrEMBL
Match: tr|A0A1S3BZS6|A0A1S3BZS6_CUCME (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103495376 PE=4 SV=1)

HSP 1 Score: 505.0 bits (1299), Expect = 1.4e-139
Identity = 301/363 (82.92%), Postives = 312/363 (85.95%), Query Frame = 0


Query: 1   MDFFSSRKLLSEDDDDH--KEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADH 60
           MDF SSRKLLS DD     K+ CKDC DY S SC S CLEKC++YCY I+IPI PPDAD 
Sbjct: 1   MDFLSSRKLLSSDDXXXXLKKLCKDCFDYSSYSCPSYCLEKCKNYCY-IHIPIPPPDADD 60

Query: 61  INPTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXX 120
           IN TSS KSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFY+GRR   XXXXXXXXXXXX
Sbjct: 61  INQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRXXXXXXXXXXXXXXX 120

Query: 121 QHDFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180
             +FLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED
Sbjct: 121 XXEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEED 180

Query: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGEL 240
           ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPV                   TQIGEL
Sbjct: 181 ETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVXXXXXXXXXXXXXXXXXXXTQIGEL 240

Query: 241 QREEGDGANLGE-SSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALR 300
           QREEGDGANLGE     XXXXXXXXXXXXX FADEDLEERSSDIQP+RRSVSLDSLSALR
Sbjct: 241 QREEGDGANLGEXXXXXXXXXXXXXXXXXXXFADEDLEERSSDIQPVRRSVSLDSLSALR 300

Query: 301 ISSDFANVNEKMDSEAETIQRNGKKSSQGRGHSSTSSMNRSVSCSAKFLMRSSTQINTES 360
           ISS FANVNEK+DS+AETIQR GKKSSQGRG+SSTSSMNRSVSCS KFLMRSSTQINTE+
Sbjct: 301 ISSVFANVNEKLDSDAETIQRKGKKSSQGRGYSSTSSMNRSVSCSGKFLMRSSTQINTET 360

[Close]

BLAST of CsaV3_7G007060 vs. TrEMBL
Match: tr|A0A2P2MLC4|A0A2P2MLC4_RHIMU (Ring finger protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 7.7e-61
Identity = 163/376 (43.35%), Postives = 204/376 (54.26%), Query Frame = 0


Query: 7   RKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHINPTSSIK 66
           RKLLS  D    + C+    +  D            Y  +  +P RPP      P S I 
Sbjct: 6   RKLLSVFDKTIGDLCEPFCAH--DXXXXXXXXXXXXYHCSHAVPSRPPPP----PISLIF 65

Query: 67  SPHKL-SNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQHDFLDE 126
            P +    ++TS +A LS TFLLV+ YAIY +FY+G RRR               DF+DE
Sbjct: 66  HPQRRPGKVLTSILAGLSATFLLVIFYAIYVKFYSGARRRGSRRSQDQGNETTHEDFIDE 125

Query: 127 EQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLP 186
             GPVLDHPIWYI T+GL P+VI +I VCK+K G+GL++GT+CSVCL+EFEEDETLRLLP
Sbjct: 126 NHGPVLDHPIWYINTVGLQPSVISSIGVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLP 185

Query: 187 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAA---ASPPQLRPPAETQIGELQ--- 246
           KCSHAFH+PCIDTWLRSHTNCPMCRAP+VA +A A+   +      P  ETQ+G L+   
Sbjct: 186 KCSHAFHIPCIDTWLRSHTNCPMCRAPIVANTARASDTESDGDNRSPGEETQVGALEDVA 245

Query: 247 --REEGDGANLGESSARXXXXXXXXXXXXXHFADEDLEERSSDIQPMRRSVSLDSLSALR 306
               E +G + GE                    DE+L      IQPMRRSVSLDSLSA +
Sbjct: 246 ESSREMEGRD-GELRTGTEEESELEDEDMKRRCDEELNGEGDGIQPMRRSVSLDSLSAFK 305

Query: 307 ISSDFAN-------------VNEKMDSEAETIQRNGKK------------SSQGRG-HSS 348
           I+   AN             V ++ +S  E   R  ++            SS GR  H  
Sbjct: 306 INQSLANIIPEQSDRNSGARVGKEGESNKEIAPRRDRESGNQSLLRFMAGSSIGRSFHIG 365

[Close]

BLAST of CsaV3_7G007060 vs. TrEMBL
Match: tr|A0A059BC62|A0A059BC62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G00895 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.8e-60
Identity = 148/291 (50.86%), Postives = 191/291 (65.64%), Query Frame = 0


Query: 68  PHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGR-RRRIXXXXXXXXXXXXQHD-FLDE 127
           PH LS  +    A L+  F+LV+CYA+YAR+Y+GR R R              HD FLD 
Sbjct: 79  PHHLSPFLIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDH 138

Query: 128 EQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLP 187
           +QGPVLDHPIWYIRT+GLPP+VI AI  CK+K GEGLI+GTECSVCLSEF+EDETLRLLP
Sbjct: 139 DQGPVLDHPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLP 198

Query: 188 KCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAET--QIGELQREEG 247
           KC+HAFH+PCIDTWLRSHTNCP+CRAP+V  + AA A PP+ RP AE+    GE+  +E 
Sbjct: 199 KCNHAFHVPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPE-RPNAESSASAGEMGIQEV 258

Query: 248 DGANLGESSARXXXXXXXXXXXXXHFADED---LEERSSDIQPMRRSVSLDSLSALRISS 307
           D   LG  + R                ++    +E+ S+++QPMRRSVSLDSLSAL+IS 
Sbjct: 259 DD-GLGREAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISL 318

Query: 308 DFANVNEKMDSEAETIQRNGKK-SSQGRGHSSTSSMNRSVSCSAKFLMRSS 351
             AN    +  E+ + +++G + + +  G + T    R+ SC  K  MRS+
Sbjct: 319 AVANA---LRGESGSSRKSGPELAGENHGIALTIVPKRNASCE-KQPMRST 361

[Close]

BLAST of CsaV3_7G007060 vs. TrEMBL
Match: tr|A0A2I4F5J4|A0A2I4F5J4_9ROSI (RING-H2 finger protein ATL52-like OS=Juglans regia OX=51240 GN=LOC108995749 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 7.9e-58
Identity = 160/359 (44.57%), Postives = 199/359 (55.43%), Query Frame = 0


Query: 32  CSSDCLE--KCRDYC-YNINIPIR-PPDADHINPTSSIKSPHKLSNLVTSTIALLSFTFL 91
           C   CL+   C   C YNI+  +  PP         S K  HK S  + +TI  ++  FL
Sbjct: 34  CPQICLDLKVCPKTCIYNISYLLTPPPSTPSALDDQSNKPHHKFSPFMIATITFIAAAFL 93

Query: 92  LVLCYAIYARFYAGRRRRIXXXXXXXXXXXXQHDFLDEEQGPVLDHPIWYIRTIGLPPAV 151
            V CYAIY+R+Y GRR               Q +FLDEE GPV DHPIWYIRT+GL P++
Sbjct: 94  FVCCYAIYSRYYLGRRDS-RRRPQPQTVETLQDEFLDEEDGPVPDHPIWYIRTVGLQPSI 153

Query: 152 IDAIAVCKFKSGEGLIDGTECSVCLSEFEEDETLRLLPKCSHAFHLPCIDTWLRSHTNCP 211
           I +IAVCK+K GEGL++G ECSVCL+EFEEDETLRLLPKCSHAFH+PCIDTWLRSHTNCP
Sbjct: 154 IGSIAVCKYKRGEGLVEGAECSVCLNEFEEDETLRLLPKCSHAFHVPCIDTWLRSHTNCP 213

Query: 212 MCRAPVV---AQSAAAAASPPQLRPPAETQIGELQREEGDGANLGE--SSARXXXXXXXX 271
           MCRAP+V    Q+    A+     P  ET +G  Q     GA+ GE     R        
Sbjct: 214 MCRAPIVKNTVQTPPPEANVNNSSPGEETPVGIPQ---SGGASDGELDDEVREIRIDIED 273

Query: 272 XXXXXHFADEDLEERS----SDIQPMRRSVSLDSLSALRISSDFAN-------------- 331
                   D  + E S    +DIQPMRRSVSLDSLSA +IS   AN              
Sbjct: 274 EGESAAVNDGKISENSNQDVNDIQPMRRSVSLDSLSASKISFAVANRVPMGSHGSSHNQG 333

Query: 332 --VNE--------KMDSEAETIQRNGKKSSQGRGHSSTS-SMNRSVSCSAKFLMRSSTQ 353
             VNE        +++    +++  G  SS+GR   +   SM RS S + KFL+ + +Q
Sbjct: 334 VKVNESNTRIVPKRLEGNRNSLKLLG-SSSKGRAMPNLPVSMKRSFSWNGKFLLFNYSQ 387

The following BLAST results are available for this feature:

BLAST of CsaV3_7G007060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004137067.1	3.7e-184	100.00	PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus] >KGN43773.1 hypothetic...	[more]
XP_008455131.1	2.1e-139	82.92	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
XP_022971987.1	1.7e-99	66.19	E3 ubiquitin-protein ligase RING1-like [Cucurbita maxima]	[more]
XP_022952906.1	3.1e-90	62.78	E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]	[more]
XP_023554710.1	5.5e-79	58.52	E3 ubiquitin-protein ligase RING1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G007060 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33565.1	3.7e-37	44.19	RING/U-box superfamily protein	[more]
AT1G72220.1	4.3e-33	40.63	RING/U-box superfamily protein	[more]
AT5G10380.1	4.7e-32	71.95	RING/U-box superfamily protein	[more]
AT5G17600.1	2.5e-25	35.34	RING/U-box superfamily protein	[more]
AT3G03550.1	3.4e-22	32.90	RING/U-box superfamily protein	[more]

BLAST of CsaV3_7G007060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8LFY8\|ATL54_ARATH	7.7e-32	40.63	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2	[more]
sp\|Q9LX93\|ATL55_ARATH	8.5e-31	71.95	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana OX=3702 GN=ATL55 PE=1 ...	[more]
sp\|Q7XLY8\|ATL41_ORYSJ	8.3e-26	38.73	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica OX=3994...	[more]
sp\|Q9LF64\|ATL52_ARATH	4.5e-24	35.34	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana OX=3702 GN=ATL52 PE=2 SV=1	[more]
sp\|Q9SRQ8\|ATL51_ARATH	6.1e-21	32.90	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana OX=3702 GN=ATL51 PE=2 SV=2	[more]

BLAST of CsaV3_7G007060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2P1\|A0A0A0K2P1_CUCSA	2.5e-184	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G066300 PE=4 SV=1	[more]
tr\|A0A1S3BZS6\|A0A1S3BZS6_CUCME	1.4e-139	82.92	E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103495376 P...	[more]
tr\|A0A2P2MLC4\|A0A2P2MLC4_RHIMU	7.7e-61	43.35	Ring finger protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1	[more]
tr\|A0A059BC62\|A0A059BC62_EUCGR	3.8e-60	50.86	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G00895 PE=4 SV...	[more]
tr\|A0A2I4F5J4\|A0A2I4F5J4_9ROSI	7.9e-58	44.57	RING-H2 finger protein ATL52-like OS=Juglans regia OX=51240 GN=LOC108995749 PE=4...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G007060.1	CsaV3_7G007060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 168..209 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 167..210 e-value: 3.1E-13 score: 49.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 168..210 score: 12.902
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 145..219 e-value: 1.8E-21 score: 77.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 318..360
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 301..360
None	No IPR available	PANTHER	PTHR14155:SF311	SUBFAMILY NOT NAMED	coord: 4..266
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 4..266
None	No IPR available	CDD	cd16454	RING-H2_PA-TM-RING	coord: 167..210 e-value: 9.65338E-16 score: 69.6381
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 162..216

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G007060	CSPI07G06080	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G007060	Cucsa.218410	Cucumber (Gy14) v1	cgycucB342
CsaV3_7G007060	CmaCh11G016590	Cucurbita maxima (Rimu)	cmacucB0180
CsaV3_7G007060	CmoCh11G014770	Cucurbita moschata (Rifu)	cmocucB0157
CsaV3_7G007060	Cp4.1LG15g03610	Cucurbita pepo (Zucchini)	cpecucB0328
CsaV3_7G007060	Cp4.1LG04g07030	Cucurbita pepo (Zucchini)	cpecucB0866
CsaV3_7G007060	CsGy7G005760	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G007060	Cla012901	Watermelon (97103) v1	cucwmB587
CsaV3_7G007060	MELO3C018588	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G007060	ClCG09G015940	Watermelon (Charleston Gray)	cucwcgB535
CsaV3_7G007060	Lsi03G007300	Bottle gourd (USVL1VR-Ls)	cuclsiB551
CsaV3_7G007060	MELO3C018588.2	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G007060	Cla97C09G177750	Watermelon (97103) v2	cucwmbB581
CsaV3_7G007060	Bhi05G000739	Wax gourd	cucwgoB700

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G007060	Silver-seed gourd	carcucB0323
CsaV3_7G007060	Silver-seed gourd	carcucB0413
CsaV3_7G007060	Silver-seed gourd	carcucB0770
CsaV3_7G007060	Cucurbita maxima (Rimu)	cmacucB0171
CsaV3_7G007060	Cucurbita maxima (Rimu)	cmacucB0639
CsaV3_7G007060	Cucurbita maxima (Rimu)	cmacucB0918
CsaV3_7G007060	Cucurbita moschata (Rifu)	cmocucB0160
CsaV3_7G007060	Cucurbita moschata (Rifu)	cmocucB0623
CsaV3_7G007060	Cucurbita moschata (Rifu)	cmocucB0910
CsaV3_7G007060	Cucurbita pepo (Zucchini)	cpecucB0323
CsaV3_7G007060	Cucurbita pepo (Zucchini)	cpecucB0582
CsaV3_7G007060	Cucurbita pepo (Zucchini)	cpecucB0868
CsaV3_7G007060	Wild cucumber (PI 183967)	cpicucB252
CsaV3_7G007060	Bottle gourd (USVL1VR-Ls)	cuclsiB554
CsaV3_7G007060	Bottle gourd (USVL1VR-Ls)	cuclsiB555
CsaV3_7G007060	Melon (DHL92) v3.5.1	cucmeB585
CsaV3_7G007060	Melon (DHL92) v3.6.1	cucmedB572
CsaV3_7G007060	Watermelon (Charleston Gray)	cucwcgB556
CsaV3_7G007060	Watermelon (97103) v1	cucwmB580
CsaV3_7G007060	Watermelon (97103) v1	cucwmB602
CsaV3_7G007060	Watermelon (97103) v2	cucwmbB537
CsaV3_7G007060	Wax gourd	cucwgoB674
CsaV3_7G007060	Wax gourd	cucwgoB686