ClCG09G015940 (gene) Watermelon (Charleston Gray) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	ClCG09G015940
Type	gene
Organism	Citrullus lanatus (Watermelon (Charleston Gray))
Description	Ring finger protein, putative
Location	CG_Chr09 : 31119992 .. 31121071 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTATCTCTCCTCCAGAAAACTCCTCCCAGACGACGAAGACCTCAACAAATCCTGCAAAGACTGCCTCGATTCCCTTACCGATTCTTGCTCTTCTGATTGCATCGAAAAATGCCGAAATTTCTGCTATATCTCAATTCCAATCCCATCGCCCGTCTCAAAATCGCATCACAAACTCTCCAATTTGGTCACCTCCACCATCGCCGTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGTTACGCTATATACGCCCGTTTCTACTCCGGCCGCCGCAGACGGATTCGCCGCGCCGATGCTTCACCGCCCGCGACTCATCACCAGGATGAGTTTCTCGATGAAGAACAGGGCCCTGTTTTGGATCACCCCATTTGGTACATCCGCACCGTCGGCCTCCCGCTGTCCGTCATCGAGGCTATCGCCGTCTGCAAGTTTAAATCCGGTGAGGGTTTGATCGATGGAACAGAGTGCTCTGTTTGTTTGAGCGAATTTGCAGAGGATGAAACCTTGAGGCTTTTGCCAAAGTGTAGCCACGCTTTTCATCTCCCCTGTATTGACACTTGGCTTCGATCTCACACCAATTGCCCCATGTGCCGCGCTCCTGTTGTAGCTCAGTCCACCGCCGCCGCAGCTCCGCCACCGCCGCCGCCTCCTGTGGAAACCCAGATGGGGGATTCGCAGAGGGAAGAGGGAAATGGAGCCAATTTTGGGGAAAGTTCAGCTAGAAATGAACAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCCATTTTCCTGACGAAGGTTTAGAAGAAAGAAGTAGTGATATTCAGCCAGTGAGAAGATCTGTATCACTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGTTTTTTCTGGTGTTAATGAAAAAATAGACTCTGAAGCTGAATCAATGCAGAGAAATGGGAATGGTTTGAAGAAATCATCACAAGGGAGAGGCAATTCTTCATCTGCCATGAACAGGTCAGTTTCTTGCAGTGGGAAGTTCCTAATGAGAAGCTCCACTCAGAGAAGTCATGGAACTAATCACAGTTGA

mRNA sequence

ATGGATTATCTCTCCTCCAGAAAACTCCTCCCAGACGACGAAGACCTCAACAAATCCTGCAAAGACTGCCTCGATTCCCTTACCGATTCTTGCTCTTCTGATTGCATCGAAAAATGCCGAAATTTCTGCTATATCTCAATTCCAATCCCATCGCCCGTCTCAAAATCGCATCACAAACTCTCCAATTTGGTCACCTCCACCATCGCCGTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGTTACGCTATATACGCCCGTTTCTACTCCGGCCGCCGCAGACGGATTCGCCGCGCCGATGCTTCACCGCCCGCGACTCATCACCAGGATGAGTTTCTCGATGAAGAACAGGGCCCTGTTTTGGATCACCCCATTTGGTACATCCGCACCGTCGGCCTCCCGCTGTCCGTCATCGAGGCTATCGCCGTCTGCAAGTTTAAATCCGGTGAGGGTTTGATCGATGGAACAGAGTGCTCTGTTTGTTTGAGCGAATTTGCAGAGGATGAAACCTTGAGGCTTTTGCCAAAGTGTAGCCACGCTTTTCATCTCCCCTGTATTGACACTTGGCTTCGATCTCACACCAATTGCCCCATGTGCCGCGCTCCTGTTGTAGCTCAGTCCACCGCCGCCGCAGCTCCGCCACCGCCGCCGCCTCCTGTGGAAACCCAGATGGGGGATTCGCAGAGGGAAGAGGGAAATGGAGCCAATTTTGGGGAAAGTTCAGCTAGAAATGAACAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCCATTTTCCTGACGAAGGTTTAGAAGAAAGAAGTAGTGATATTCAGCCAGTGAGAAGATCTGTATCACTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGTTTTTTCTGGTGTTAATGAAAAAATAGACTCTGAAGCTGAATCAATGCAGAGAAATGGGAATGGTTTGAAGAAATCATCACAAGGGAGAGGCAATTCTTCATCTGCCATGAACAGGTCAGTTTCTTGCAGTGGGAAGTTCCTAATGAGAAGCTCCACTCAGAGAAGTCATGGAACTAATCACAGTTGA

Coding sequence (CDS)

ATGGATTATCTCTCCTCCAGAAAACTCCTCCCAGACGACGAAGACCTCAACAAATCCTGCAAAGACTGCCTCGATTCCCTTACCGATTCTTGCTCTTCTGATTGCATCGAAAAATGCCGAAATTTCTGCTATATCTCAATTCCAATCCCATCGCCCGTCTCAAAATCGCATCACAAACTCTCCAATTTGGTCACCTCCACCATCGCCGTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGTTACGCTATATACGCCCGTTTCTACTCCGGCCGCCGCAGACGGATTCGCCGCGCCGATGCTTCACCGCCCGCGACTCATCACCAGGATGAGTTTCTCGATGAAGAACAGGGCCCTGTTTTGGATCACCCCATTTGGTACATCCGCACCGTCGGCCTCCCGCTGTCCGTCATCGAGGCTATCGCCGTCTGCAAGTTTAAATCCGGTGAGGGTTTGATCGATGGAACAGAGTGCTCTGTTTGTTTGAGCGAATTTGCAGAGGATGAAACCTTGAGGCTTTTGCCAAAGTGTAGCCACGCTTTTCATCTCCCCTGTATTGACACTTGGCTTCGATCTCACACCAATTGCCCCATGTGCCGCGCTCCTGTTGTAGCTCAGTCCACCGCCGCCGCAGCTCCGCCACCGCCGCCGCCTCCTGTGGAAACCCAGATGGGGGATTCGCAGAGGGAAGAGGGAAATGGAGCCAATTTTGGGGAAAGTTCAGCTAGAAATGAACAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCCATTTTCCTGACGAAGGTTTAGAAGAAAGAAGTAGTGATATTCAGCCAGTGAGAAGATCTGTATCACTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGTTTTTTCTGGTGTTAATGAAAAAATAGACTCTGAAGCTGAATCAATGCAGAGAAATGGGAATGGTTTGAAGAAATCATCACAAGGGAGAGGCAATTCTTCATCTGCCATGAACAGGTCAGTTTCTTGCAGTGGGAAGTTCCTAATGAGAAGCTCCACTCAGAGAAGTCATGGAACTAATCACAGTTGA

Protein sequence

MDYLSSRKLLPDDEDLNKSCKDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRGNSSSAMNRSVSCSGKFLMRSSTQRSHGTNHS

Homology

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BLAST of ClCG09G015940 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 9.8e-40
Identity = 117/351 (33.33%), Postives = 165/351 (47.01%), Query Frame = 1


Query: 25  DSLTDSCSSDCIEKCRNFCYISIPIPSPV-------SKSHHKLSNLVTSTIAVLSFTFLL 84
           DS  D     C   C  +CY+  P P P        S S    S L+ + I +L+   +L
Sbjct: 12  DSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALIL 71

Query: 85  VLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVI 144
           V  Y + +++    R     +  +    H+ + F    Q    +         GL  S+I
Sbjct: 72  VSYYTLISKYC--HRHHQTSSSETLNLNHNGEGFFSSTQRISTNGD-------GLNESMI 131

Query: 145 EAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPM 204
           ++I V K+KSG+G +DG++CSVCLSEF E+E+LRLLPKC+HAFHLPCIDTWL+SH+NCP+
Sbjct: 132 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 191

Query: 205 CRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQEQ--------E 264
           CRA V   +   A+       V     +S  + G+ +    + A  E Q          E
Sbjct: 192 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIE 251

Query: 265 EEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSGVNEKIDSE 324
           + E      +   E+  P+E  E +  D  P+RRSVSL+S   + I+ V   + E  D E
Sbjct: 252 DLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADV---LREIEDEE 311

Query: 325 AES-----MQRNGNGLKKSSQGRGNS---SSAMNRSVSCSGKFLMRSSTQR 353
            ES      QR   G      G G +   + A  RS   SG F+   ST R
Sbjct: 312 GESGGVGTSQRREEG----EDGDGKTIPPTEANQRSGGVSGFFVRSLSTGR 346

[Close]

BLAST of ClCG09G015940 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 165.6 bits (418), Expect = 9.8e-40
Identity = 109/308 (35.39%), Postives = 157/308 (50.97%), Query Frame = 1


Query: 46  SIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRR----ADAS 105
           ++ +PS  S S     +++T T AVL+   +L+  + + A+F+S    R+ +    +D  
Sbjct: 68  AVYLPSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNE 127

Query: 106 PPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCL 165
              T  ++EF D EQ   +DHPIW IRT GL  S+I +I +C +K G+GLI+ T+C VCL
Sbjct: 128 DNDTVMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCL 187

Query: 166 SEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET 225
           +EF EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +   S      P    PVE 
Sbjct: 188 NEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT---PRYSGPVEV 247

Query: 226 QMGDSQREEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPV 285
             G S     N     E     E +   + +E ++ +   E   F  +G    +   + V
Sbjct: 248 TPGGSGSHLENDGVDEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETETKERV 307

Query: 286 R-----------RSVSLDSLSALRISSV-FSGVNEKIDSEAESMQRNGNGLKKSSQGRGN 338
           R            SV+  S +   + SV F G + +  SE E  + NG      S+  G 
Sbjct: 308 RVLKECMDPNGGDSVNSLSHTKTHVESVDFPGKSCENQSE-EFTRHNGEDEASCSEENGG 365

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BLAST of ClCG09G015940 vs. Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 5.4e-38
Identity = 91/214 (42.52%), Postives = 122/214 (57.01%), Query Frame = 1


Query: 35  CIE-KCRNFCYISIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR 94
           C++ K   FC+   P P P      +LS L+ ++I V+  + +L L    +   +  ++R
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQR 71

Query: 95  RIRRADASPPATHHQDEFLDEEQGPVLD-HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLI 154
           RI  A  +P  T+ Q++  + E+    D H +W I TVGL  S I +I V  FK GEG+I
Sbjct: 72  RISAASVTPGDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 155 DGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAP 214
           DGTECSVCL+EF EDE+LRLLPKCSHAFHL CIDTWL SH NCP+CRAPV+  +      
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT------ 191

Query: 215 PPPPPPVETQMG-DSQREEGNGANFGESSARNEQ 246
              PP  ET+       E  N     + S+R+ +
Sbjct: 192 --EPPHQETETNHQPDSESSNDLRGRQDSSRSRR 216

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BLAST of ClCG09G015940 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 5.4e-30
Identity = 96/311 (30.87%), Postives = 140/311 (45.02%), Query Frame = 1


Query: 28  TDSCSSD-CIEKCRNFCYISIPIPSPVS--------KSHHKLSNLVTSTIAVLSFTFLLV 87
           T  CS   C   C  +CY   P P P           S    S LV + I VL+  FLLV
Sbjct: 14  TRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLV 73

Query: 88  LCYAIYARF---YSGRRRRIRRADASPPATHHQDEFLDEE-QGPVLDHPIWYIRTV-GLP 147
             Y   +++    S  R R+  + +   A             G    H  W +    GL 
Sbjct: 74  SYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLD 133

Query: 148 LSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHT 207
            ++I  I VCK++ G+G +  T+CSVCL EF++ E+LRLLP+CSHAFH  CIDTWL+SH+
Sbjct: 134 ETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHS 193

Query: 208 NCPMCRAPVVAQSTAAAAPPPPP-PPVETQMGDSQREEGNGANFGESSARNEQQEQEEEE 267
           NCP+CRA +   +   A+P P    P ET  G     E      G  +   EQQE     
Sbjct: 194 NCPLCRANITFVTVGLASPEPEGCAPGET--GGDNTHEVVVVMDGLENLCEEQQEAVSRA 253

Query: 268 EEEEEEEEEEEIHFPDEGLEERSSDIQ------PVRRSVSLDSLSALRISSVFSGVNEKI 318
              +++ + +++    EG+EE +   +      P +R  S   L       +   + E +
Sbjct: 254 STADDDHDAKDV---AEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIADVLQESM 313

[Close]

BLAST of ClCG09G015940 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 127.9 bits (320), Expect = 2.3e-28
Identity = 101/341 (29.62%), Postives = 148/341 (43.40%), Query Frame = 1


Query: 25  DSLTDSCSSDCIEKCRNFCYISIPIPSPV------SKSHHKLSNLVTSTIAVLSFTFLLV 84
           DS  D     C   C  +CY+  P P           S    S L+ + I +L+  F+LV
Sbjct: 15  DSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILV 74

Query: 85  LCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVLDHPIWYIRTVG------L 144
             Y + +++   RR       A+       D           +      +T+G      L
Sbjct: 75  SYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGL 134

Query: 145 PLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSH 204
             S+I++I V K++  +G ++ ++CSVCLSEF E+E+LRLLPKC+HAFH+PCIDTWL+SH
Sbjct: 135 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 194

Query: 205 TNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQEQEEEE 264
           +NCP+CRA +V  S            +          E N  + G+ S      + E   
Sbjct: 195 SNCPLCRAFIVTSSAV---------EIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSR 254

Query: 265 EEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDS-LSALRISSVFSGVNEKIDSEAE 324
              E   E      P E  + R  +    RRS SL+S    + I+ +   + +  +S   
Sbjct: 255 SRNETVNEGSTPK-PPEMQDSRDGE---ERRSASLNSGGGVVSIADILREIEDDEESAGV 314

Query: 325 SMQR---NGNGLKKSSQGRGNSSSAMNRSVSCSGKFLMRSS 350
              R    G G K        S SA N++   S  FL+RSS
Sbjct: 315 GTSRWVEEGEGEKTPPP----SGSAANQTNGIS-NFLVRSS 337

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BLAST of ClCG09G015940 vs. TrEMBL
Match: A0A0A0K2P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 4.0e-149
Identity = 279/372 (75.00%), Postives = 311/372 (83.60%), Query Frame = 1


Query: 1   MDYLSSRKLLPDDEDLNKS-CKDCLDSLTDSCSSDCIEKCRNFCY-ISIPI--------- 60
           MD+ SSRKLL +D+D +K  CKDC D  +DSCSSDC+EKCR++CY I+IPI         
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQD 120
           P+   KS HKLSNLVTSTIA+LSFTFLLVLCYAIYARFY+GRRRRIR  D  PP THHQ 
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120

Query: 121 EFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDET 180
           +FLDEEQGPVLDHPIWYIRT+GLP +VI+AIAVCKFKSGEGLIDGTECSVCLSEF EDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPP-PPPVETQMGDSQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS AAAA PP   PP ETQ+G+ QR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLD 300
           EEG+GAN GESSAR          EEE+EE+EE+E HF DE LEERSSDIQP+RRSVSLD
Sbjct: 241 EEGDGANLGESSART---------EEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLD 300

Query: 301 SLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRGNSS-SAMNRSVSCSGKFLMR 360
           SLSALRISS F+ VNEK+DSEAE++QRNG   KKSSQGRG+SS S+MNRSVSCS KFLMR
Sbjct: 301 SLSALRISSDFANVNEKMDSEAETIQRNG---KKSSQGRGHSSTSSMNRSVSCSAKFLMR 360

[Close]

BLAST of ClCG09G015940 vs. TrEMBL
Match: A0A059BC62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 5.8e-71
Identity = 168/377 (44.56%), Postives = 214/377 (56.76%), Query Frame = 1


Query: 19  SCKDCLDSLTDSCSSDCIEKCRNFCYISIP---IPSPVSKSH------------HKLSNL 78
           SC   LD+    C + C++ C + C   IP   +P P                 H LS  
Sbjct: 27  SCHPILDN-GGYCITPCLDVCPDVCRQPIPPLPLPPPCPPEDEPPSLDAYGGRPHHLSPF 86

Query: 79  VTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRAD--ASPPATHHQDEFLDEEQGPVLD 138
           +    A L+  F+LV+CYA+YAR+YSGR R   R    A P  +   DEFLD +QGPVLD
Sbjct: 87  LIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDHDQGPVLD 146

Query: 139 HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFH 198
           HPIWYIRTVGLP SVI AI  CK+K GEGLI+GTECSVCLSEF EDETLRLLPKC+HAFH
Sbjct: 147 HPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLPKCNHAFH 206

Query: 199 LPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET-----QMGDSQREEGNGANF 258
           +PCIDTWLRSHTNCP+CRAP+V  + AA A PP  P  E+     +MG  + ++G G   
Sbjct: 207 VPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPERPNAESSASAGEMGIQEVDDGLG--- 266

Query: 259 GESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRIS 318
                   + E+  E   E EE+ E ++    + +E+ S+++QP+RRSVSLDSLSAL+IS
Sbjct: 267 -------REAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKIS 326

Query: 319 SV------------------FSGVNE--------KIDSEAESMQRNGNGLKKSSQGRG-- 346
                                +G N         K ++  E       G   SS GR   
Sbjct: 327 LAVANALRGESGSSRKSGPELAGENHGIALTIVPKRNASCEKQPMRSTGSSSSSIGRSLA 386

[Close]

BLAST of ClCG09G015940 vs. TrEMBL
Match: B9S9D3_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 6.6e-67
Identity = 164/377 (43.50%), Postives = 209/377 (55.44%), Query Frame = 1


Query: 4   LSSRKLLPDDED---LNKSC--KDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHH 63
           L  RKLL D  +   L+K C  K  L+  T SC   C     ++CY++     P   +H 
Sbjct: 3   LQFRKLLDDSYNETALSKICSSKCVLEEDTYSCDGVC-----SYCYVNCSYKLPPPSTHR 62

Query: 64  KLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR--RIRRADASPPATHHQDEFLDEEQ 123
            +S        VLS  F LV CYAIY +FYSG RR    +  D     TH  +EFLDE+ 
Sbjct: 63  SISGKFLIAGLVLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTH--EEFLDEDH 122

Query: 124 GPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKC 183
           GP+LDHP+WYI T+GL  SVI +I+VCK+K G+GL++GT+CSVCL+EF EDETLRLLPKC
Sbjct: 123 GPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKC 182

Query: 184 SHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPV----ETQMGDSQREEGN 243
           SHAFH+PCIDTWLRSHTNCP+CRAP+VA S  A +       +    ET++G S+ ++  
Sbjct: 183 SHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQ-- 242

Query: 244 GANFGESSARNEQQEQE-EEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLS 303
                ES    E  + E     EEE E E+E      E L      IQP+RRSVSLDSLS
Sbjct: 243 -----ESERELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLS 302

Query: 304 ALRISSVFSG--------------VNEKIDSEAESMQRNGNG------LKKSSQGRG--N 347
           A +IS                   VNE   S     +R G+       +  SS GR    
Sbjct: 303 AFKISQALVSVCPVESDRNSRTGLVNESESSMEIVPKRVGSNQSLLKFMASSSIGRSLQI 362

[Close]

BLAST of ClCG09G015940 vs. TrEMBL
Match: B9HEH8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g PE=4 SV=2)

HSP 1 Score: 261.2 bits (666), Expect = 1.9e-66
Identity = 144/313 (46.01%), Postives = 187/313 (59.74%), Query Frame = 1


Query: 54  SKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLD 113
           S    KLS +  + I +   T +L  CYAIYA+F   RRRR  + +        +D+F D
Sbjct: 6   SSPQQKLSKIALAMIVLSVITSVLATCYAIYAKFIRPRRRRSTQREEEAEIIETRDQFAD 65

Query: 114 EEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLL 173
           E++G V+DHPIWYIRTVGL  SVI +I V K+KSG+GL++GTECSVCLSEF +DETLRLL
Sbjct: 66  EDEGRVVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLL 125

Query: 174 PKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET------QMGDSQ 233
           PKCSHAFH+PCIDTWLRSHTNCP+CRAP+V  +  A +         +      ++ +  
Sbjct: 126 PKCSHAFHIPCIDTWLRSHTNCPLCRAPIVTSTAIATSSQANLDDTSSGEETRIEVSEED 185

Query: 234 REEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSL 293
           +E        +   R   +E+ E + E   EEEEEE+        E    IQP+RRSVSL
Sbjct: 186 QESSREMEGRDGGVRVVTEEESELQSENLNEEEEEEV--------EEEDGIQPLRRSVSL 245

Query: 294 DSLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSS----QGRGNSSSAMNRSVSCSGK 353
           DSLSA +I    + V+  ++S+  S  R   G   SS    Q RG SS  + RS+SCSGK
Sbjct: 246 DSLSAFKIIQALANVHPAVESDRNSGTRRAGGGDGSSGESVQNRGPSS--LKRSISCSGK 305

Query: 354 -FLMRSSTQRSHG 356
            FL R    R+ G
Sbjct: 306 FFLSRPRRNRNSG 308

[Close]

BLAST of ClCG09G015940 vs. TrEMBL
Match: A0A067L9Y9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24933 PE=4 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 1.6e-65
Identity = 150/377 (39.79%), Postives = 202/377 (53.58%), Query Frame = 1


Query: 1   MDYLSSRKLLPDDEDLNKSCKDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHHKL 60
           MD+   + L  ++E  +K C    +     C   C + C+  C    P P P+   HH+ 
Sbjct: 1   MDFRFRKLLSEENETCSKFCVSSDEVSYYYCQGSCWDYCKGNCVFK-PSPPPIITIHHQK 60

Query: 61  SNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVL 120
           S     T  VL+  FLLV  YA Y +FYS RRR   R +         +EFLDE+ GP++
Sbjct: 61  SIKFLITGIVLASVFLLVAFYAFYVKFYSRRRRTEEREEQR---NEIHEEFLDEDHGPII 120

Query: 121 DHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAF 180
           DHPIWYI TVGL  SVI +I+VCK+K  +GL++GT CSVCL+EF EDETLRLLPKCSHAF
Sbjct: 121 DHPIWYINTVGLQPSVINSISVCKYKRTDGLVEGTGCSVCLNEFQEDETLRLLPKCSHAF 180

Query: 181 HLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREE--GNGANFGE 240
           H+PCIDTWLRSHTNCP CRAP+V    +  A         T  G+  R    G G    E
Sbjct: 181 HIPCIDTWLRSHTNCPNCRAPIVINPNSDRAASSETNVEGTSNGEETRTRVPGTGRESDE 240

Query: 241 SSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRIS-- 300
               + +     +++EEEEE   E      E L      +QP+RRSVSLDSLSA +IS  
Sbjct: 241 IEDVDGELRSRTDQDEEEEEVNGENRRNRVEDLNGEKDGLQPIRRSVSLDSLSAFKISQG 300

Query: 301 -SVFSGVNEKIDSEAESMQRNGNGLK-KSSQGRGNSS------------------SAMNR 354
            ++   +    +S  E ++++ + +   S +  GN S                  S++ R
Sbjct: 301 LAIVDQIQSDRNSRTEHVKQSESSMGIVSKRFSGNQSLSRFMASSSIARSLQIGPSSLKR 360

[Close]

BLAST of ClCG09G015940 vs. TAIR10
Match: AT4G33565.1 (AT4G33565.1 RING/U-box superfamily protein)

HSP 1 Score: 199.1 bits (505), Expect = 4.5e-51
Identity = 136/344 (39.53%), Postives = 180/344 (52.33%), Query Frame = 1


Query: 10  LPDDEDLNKSCKD-CLDSLTDS--CSSDCIEKCRNFCYISIPIP-SPVSKSHHK------ 69
           +P +   +  CK+ C+  L     CSS C+++C + C I +    SP ++ HH       
Sbjct: 65  MPKETFSDSLCKNNCIQELKTLGYCSSYCLDECPSICEIVVISGLSPPAEIHHDDNLKRI 124

Query: 70  LSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPV 129
           L    +S I  L    LLVLC+    +FY  RRR I  +           +F D     +
Sbjct: 125 LIISASSIITTLFLLTLLVLCF----KFYYRRRRSITTSRRWSMEEARNWDF-DGPAPVI 184

Query: 130 LDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHA 189
           +DHPIW+IRT+GL  +VI +I VC++   +G+++GT+CSVCLSEF E+ETLRLLPKC HA
Sbjct: 185 VDHPIWHIRTIGLNPTVISSIKVCQYSKKDGVVEGTDCSVCLSEFEEEETLRLLPKCKHA 244

Query: 190 FHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGES 249
           FHL CIDTWLRSHTNCP+CRAP+V  +T               M D   E        E 
Sbjct: 245 FHLYCIDTWLRSHTNCPLCRAPIVEANT---------------MIDDHSE-----GLEEI 304

Query: 250 SARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVF 309
           S       +E  ++ +EE EEE +    +   +   S  Q VRRSVSLDSLS LR+S V 
Sbjct: 305 SV---MIPEENGDDTDEEIEEERDGFVSNISRDHGESQQQRVRRSVSLDSLSGLRVSEVV 364

Query: 310 SGVNEKIDSEAESMQRNGNGLKKSSQGRGNSSSAMNRSVSCSGK 344
            G       E E ++R  N       GR   SS + RS+S SGK
Sbjct: 365 VG------REKEKLKRGNN----IGSGR---SSLLKRSISYSGK 367

[Close]

BLAST of ClCG09G015940 vs. TAIR10
Match: AT1G72220.1 (AT1G72220.1 RING/U-box superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-41
Identity = 109/308 (35.39%), Postives = 157/308 (50.97%), Query Frame = 1


Query: 46  SIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRR----ADAS 105
           ++ +PS  S S     +++T T AVL+   +L+  + + A+F+S    R+ +    +D  
Sbjct: 68  AVYLPSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNE 127

Query: 106 PPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCL 165
              T  ++EF D EQ   +DHPIW IRT GL  S+I +I +C +K G+GLI+ T+C VCL
Sbjct: 128 DNDTVMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCL 187

Query: 166 SEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET 225
           +EF EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +   S      P    PVE 
Sbjct: 188 NEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT---PRYSGPVEV 247

Query: 226 QMGDSQREEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPV 285
             G S     N     E     E +   + +E ++ +   E   F  +G    +   + V
Sbjct: 248 TPGGSGSHLENDGVDEEDHGEIENRVDSDFKESDDSDIRIEIYRFDSDGDGSETETKERV 307

Query: 286 R-----------RSVSLDSLSALRISSV-FSGVNEKIDSEAESMQRNGNGLKKSSQGRGN 338
           R            SV+  S +   + SV F G + +  SE E  + NG      S+  G 
Sbjct: 308 RVLKECMDPNGGDSVNSLSHTKTHVESVDFPGKSCENQSE-EFTRHNGEDEASCSEENGG 365

[Close]

BLAST of ClCG09G015940 vs. TAIR10
Match: AT5G17600.1 (AT5G17600.1 RING/U-box superfamily protein)

HSP 1 Score: 165.6 bits (418), Expect = 5.5e-41
Identity = 117/351 (33.33%), Postives = 165/351 (47.01%), Query Frame = 1


Query: 25  DSLTDSCSSDCIEKCRNFCYISIPIPSPV-------SKSHHKLSNLVTSTIAVLSFTFLL 84
           DS  D     C   C  +CY+  P P P        S S    S L+ + I +L+   +L
Sbjct: 12  DSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALIL 71

Query: 85  VLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVI 144
           V  Y + +++    R     +  +    H+ + F    Q    +         GL  S+I
Sbjct: 72  VSYYTLISKYC--HRHHQTSSSETLNLNHNGEGFFSSTQRISTNGD-------GLNESMI 131

Query: 145 EAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPM 204
           ++I V K+KSG+G +DG++CSVCLSEF E+E+LRLLPKC+HAFHLPCIDTWL+SH+NCP+
Sbjct: 132 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 191

Query: 205 CRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQEQ--------E 264
           CRA V   +   A+       V     +S  + G+ +    + A  E Q          E
Sbjct: 192 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIE 251

Query: 265 EEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSGVNEKIDSE 324
           + E      +   E+  P+E  E +  D  P+RRSVSL+S   + I+ V   + E  D E
Sbjct: 252 DLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADV---LREIEDEE 311

Query: 325 AES-----MQRNGNGLKKSSQGRGNS---SSAMNRSVSCSGKFLMRSSTQR 353
            ES      QR   G      G G +   + A  RS   SG F+   ST R
Sbjct: 312 GESGGVGTSQRREEG----EDGDGKTIPPTEANQRSGGVSGFFVRSLSTGR 346

[Close]

BLAST of ClCG09G015940 vs. TAIR10
Match: AT5G10380.1 (AT5G10380.1 RING/U-box superfamily protein)

HSP 1 Score: 159.8 bits (403), Expect = 3.0e-39
Identity = 91/214 (42.52%), Postives = 122/214 (57.01%), Query Frame = 1


Query: 35  CIE-KCRNFCYISIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR 94
           C++ K   FC+   P P P      +LS L+ ++I V+  + +L L    +   +  ++R
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQR 71

Query: 95  RIRRADASPPATHHQDEFLDEEQGPVLD-HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLI 154
           RI  A  +P  T+ Q++  + E+    D H +W I TVGL  S I +I V  FK GEG+I
Sbjct: 72  RISAASVTPGDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 155 DGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAP 214
           DGTECSVCL+EF EDE+LRLLPKCSHAFHL CIDTWL SH NCP+CRAPV+  +      
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT------ 191

Query: 215 PPPPPPVETQMG-DSQREEGNGANFGESSARNEQ 246
              PP  ET+       E  N     + S+R+ +
Sbjct: 192 --EPPHQETETNHQPDSESSNDLRGRQDSSRSRR 216

[Close]

BLAST of ClCG09G015940 vs. TAIR10
Match: AT3G03550.1 (AT3G03550.1 RING/U-box superfamily protein)

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 101/341 (29.62%), Postives = 148/341 (43.40%), Query Frame = 1


Query: 25  DSLTDSCSSDCIEKCRNFCYISIPIPSPV------SKSHHKLSNLVTSTIAVLSFTFLLV 84
           DS  D     C   C  +CY+  P P           S    S L+ + I +L+  F+LV
Sbjct: 15  DSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILV 74

Query: 85  LCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVLDHPIWYIRTVG------L 144
             Y + +++   RR       A+       D           +      +T+G      L
Sbjct: 75  SYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGL 134

Query: 145 PLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSH 204
             S+I++I V K++  +G ++ ++CSVCLSEF E+E+LRLLPKC+HAFH+PCIDTWL+SH
Sbjct: 135 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 194

Query: 205 TNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQEQEEEE 264
           +NCP+CRA +V  S            +          E N  + G+ S      + E   
Sbjct: 195 SNCPLCRAFIVTSSAV---------EIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSR 254

Query: 265 EEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDS-LSALRISSVFSGVNEKIDSEAE 324
              E   E      P E  + R  +    RRS SL+S    + I+ +   + +  +S   
Sbjct: 255 SRNETVNEGSTPK-PPEMQDSRDGE---ERRSASLNSGGGVVSIADILREIEDDEESAGV 314

Query: 325 SMQR---NGNGLKKSSQGRGNSSSAMNRSVSCSGKFLMRSS 350
              R    G G K        S SA N++   S  FL+RSS
Sbjct: 315 GTSRWVEEGEGEKTPPP----SGSAANQTNGIS-NFLVRSS 337

[Close]

BLAST of ClCG09G015940 vs. NCBI nr
Match: gi|659110255|ref|XP_008455131.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 553.1 bits (1424), Expect = 3.5e-154
Identity = 285/373 (76.41%), Postives = 314/373 (84.18%), Query Frame = 1


Query: 1   MDYLSSRKLLP---DDEDLNKSCKDCLDSLTDSCSSDCIEKCRNFCYISIPIPSP----- 60
           MD+LSSRKLL    +D+DL K CKDC D  + SC S C+EKC+N+CYI IPIP P     
Sbjct: 1   MDFLSSRKLLSSDDEDDDLKKLCKDCFDYSSYSCPSYCLEKCKNYCYIHIPIPPPDADDI 60

Query: 61  ----VSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQ 120
                +KS HKLSNLVTSTIA+LSFTFLLVLCYAIYARFYSGRRRRIR  D  PP THHQ
Sbjct: 61  NQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRRRIRLPDPPPPETHHQ 120

Query: 121 DEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDE 180
            EFLDEEQGPVLDHPIWYIRT+GLP +VI+AIAVCKFKSGEGLIDGTECSVCLSEF EDE
Sbjct: 121 HEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDE 180

Query: 181 TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPP-PPVETQMGDSQ 240
           TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS+AAAA PPPP PP ETQ+G+ Q
Sbjct: 181 TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSSAAAASPPPPRPPAETQIGELQ 240

Query: 241 REEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSL 300
           REEG+GAN GESSARN        EEE+E++ EEEE HF DE LEERSSDIQPVRRSVSL
Sbjct: 241 REEGDGANLGESSARN--------EEEQEQQHEEEETHFADEDLEERSSDIQPVRRSVSL 300

Query: 301 DSLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRG-NSSSAMNRSVSCSGKFLM 360
           DSLSALRISSVF+ VNEK+DS+AE++QR G   KKSSQGRG +S+S+MNRSVSCSGKFLM
Sbjct: 301 DSLSALRISSVFANVNEKLDSDAETIQRKG---KKSSQGRGYSSTSSMNRSVSCSGKFLM 360

[Close]

BLAST of ClCG09G015940 vs. NCBI nr
Match: gi|449438582|ref|XP_004137067.1| (PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus])

HSP 1 Score: 535.8 bits (1379), Expect = 5.8e-149
Identity = 279/372 (75.00%), Postives = 311/372 (83.60%), Query Frame = 1


Query: 1   MDYLSSRKLLPDDEDLNKS-CKDCLDSLTDSCSSDCIEKCRNFCY-ISIPI--------- 60
           MD+ SSRKLL +D+D +K  CKDC D  +DSCSSDC+EKCR++CY I+IPI         
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQD 120
           P+   KS HKLSNLVTSTIA+LSFTFLLVLCYAIYARFY+GRRRRIR  D  PP THHQ 
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120

Query: 121 EFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDET 180
           +FLDEEQGPVLDHPIWYIRT+GLP +VI+AIAVCKFKSGEGLIDGTECSVCLSEF EDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPP-PPPVETQMGDSQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS AAAA PP   PP ETQ+G+ QR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGNGANFGESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLD 300
           EEG+GAN GESSAR          EEE+EE+EE+E HF DE LEERSSDIQP+RRSVSLD
Sbjct: 241 EEGDGANLGESSART---------EEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLD 300

Query: 301 SLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRGNSS-SAMNRSVSCSGKFLMR 360
           SLSALRISS F+ VNEK+DSEAE++QRNG   KKSSQGRG+SS S+MNRSVSCS KFLMR
Sbjct: 301 SLSALRISSDFANVNEKMDSEAETIQRNG---KKSSQGRGHSSTSSMNRSVSCSAKFLMR 360

[Close]

BLAST of ClCG09G015940 vs. NCBI nr
Match: gi|702390666|ref|XP_010065673.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis])

HSP 1 Score: 276.2 bits (705), Expect = 8.3e-71
Identity = 168/377 (44.56%), Postives = 214/377 (56.76%), Query Frame = 1


Query: 19  SCKDCLDSLTDSCSSDCIEKCRNFCYISIP---IPSPVSKSH------------HKLSNL 78
           SC   LD+    C + C++ C + C   IP   +P P                 H LS  
Sbjct: 27  SCHPILDN-GGYCITPCLDVCPDVCRQPIPPLPLPPPCPPEDEPPSLDAYGGRPHHLSPF 86

Query: 79  VTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRAD--ASPPATHHQDEFLDEEQGPVLD 138
           +    A L+  F+LV+CYA+YAR+YSGR R   R    A P  +   DEFLD +QGPVLD
Sbjct: 87  LIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDHDQGPVLD 146

Query: 139 HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFH 198
           HPIWYIRTVGLP SVI AI  CK+K GEGLI+GTECSVCLSEF EDETLRLLPKC+HAFH
Sbjct: 147 HPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLPKCNHAFH 206

Query: 199 LPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET-----QMGDSQREEGNGANF 258
           +PCIDTWLRSHTNCP+CRAP+V  + AA A PP  P  E+     +MG  + ++G G   
Sbjct: 207 VPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPERPNAESSASAGEMGIQEVDDGLG--- 266

Query: 259 GESSARNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRIS 318
                   + E+  E   E EE+ E ++    + +E+ S+++QP+RRSVSLDSLSAL+IS
Sbjct: 267 -------REAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKIS 326

Query: 319 SV------------------FSGVNE--------KIDSEAESMQRNGNGLKKSSQGRG-- 346
                                +G N         K ++  E       G   SS GR   
Sbjct: 327 LAVANALRGESGSSRKSGPELAGENHGIALTIVPKRNASCEKQPMRSTGSSSSSIGRSLA 386

[Close]

BLAST of ClCG09G015940 vs. NCBI nr
Match: gi|225465766|ref|XP_002266755.1| (PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera])

HSP 1 Score: 263.8 bits (673), Expect = 4.2e-67
Identity = 164/375 (43.73%), Postives = 216/375 (57.60%), Query Frame = 1


Query: 7   RKLLPDDEDLNKSCKDCLDSLTDS---CSSDCIEKCRNFCYISIPIPSPVSKSHHKLSNL 66
           RKL  D ++  + C+   DS ++    C   C   C   C  S    SP  K+  KLS  
Sbjct: 6   RKLFSDSDNTTEECRWYCDSGSNDSGICPPSCCSDCPLVCSYSTSTRSPPRKAE-KLSPY 65

Query: 67  VTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADASPPATHHQDEFLDEEQGPVLDHP 126
           +   ++VL+ TF +V  Y  Y ++YS RRR  RR ++  PA    D+F+DE+Q PV+DHP
Sbjct: 66  LVICLSVLATTFFVVFLYVFYKKYYS-RRRLSRRRNSQAPAEGAHDDFIDEDQEPVVDHP 125

Query: 127 IWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLP 186
           IWYIRTVGL  SVI AI +CK+K G+GL++GTECSVCL+EF EDE +RLLPKC+HAFH+P
Sbjct: 126 IWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEEDEAVRLLPKCNHAFHIP 185

Query: 187 CIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREE--GNGANFGESSA 246
           CIDTWL SHTNCPMCRA +V  S+ A AP P      +   +  R E   NG  F E   
Sbjct: 186 CIDTWLSSHTNCPMCRAGIV--SSTAGAPSPEQSVENSGPLEEARVEIPENGGQFEE--I 245

Query: 247 RNEQQEQEEEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSG 306
            +E  E     EEE E    E      E  +E   +IQP+RRSVS+DSLSA  IS   + 
Sbjct: 246 EDEVCELRIGREEEGELGGVENERSSCEVAKEEVDEIQPMRRSVSMDSLSASMISLALAN 305

Query: 307 VN-EKIDSEAESMQRN--------------GNG-----LKKSSQGR--GNSSSAMNRSVS 354
           V+ +K +  ++S   N              GN      ++ SS GR   + S++M RS S
Sbjct: 306 VHPQKSNGNSDSQLANSKKSIMPIVPKRVGGNQSLVKLMESSSMGRILQSGSTSMKRSFS 365

[Close]

BLAST of ClCG09G015940 vs. NCBI nr
Match: gi|255563198|ref|XP_002522602.1| (PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis])

HSP 1 Score: 262.7 bits (670), Expect = 9.4e-67
Identity = 164/377 (43.50%), Postives = 209/377 (55.44%), Query Frame = 1


Query: 4   LSSRKLLPDDED---LNKSC--KDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHH 63
           L  RKLL D  +   L+K C  K  L+  T SC   C     ++CY++     P   +H 
Sbjct: 3   LQFRKLLDDSYNETALSKICSSKCVLEEDTYSCDGVC-----SYCYVNCSYKLPPPSTHR 62

Query: 64  KLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR--RIRRADASPPATHHQDEFLDEEQ 123
            +S        VLS  F LV CYAIY +FYSG RR    +  D     TH  +EFLDE+ 
Sbjct: 63  SISGKFLIAGLVLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTH--EEFLDEDH 122

Query: 124 GPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKC 183
           GP+LDHP+WYI T+GL  SVI +I+VCK+K G+GL++GT+CSVCL+EF EDETLRLLPKC
Sbjct: 123 GPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKC 182

Query: 184 SHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPV----ETQMGDSQREEGN 243
           SHAFH+PCIDTWLRSHTNCP+CRAP+VA S  A +       +    ET++G S+ ++  
Sbjct: 183 SHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQ-- 242

Query: 244 GANFGESSARNEQQEQE-EEEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLS 303
                ES    E  + E     EEE E E+E      E L      IQP+RRSVSLDSLS
Sbjct: 243 -----ESERELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLS 302

Query: 304 ALRISSVFSG--------------VNEKIDSEAESMQRNGNG------LKKSSQGRG--N 347
           A +IS                   VNE   S     +R G+       +  SS GR    
Sbjct: 303 AFKISQALVSVCPVESDRNSRTGLVNESESSMEIVPKRVGSNQSLLKFMASSSIGRSLQI 362

The following BLAST results are available for this feature:

BLAST of ClCG09G015940 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ATL52_ARATH	9.8e-40	33.33	RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1	[more]
ATL54_ARATH	9.8e-40	35.39	RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2	[more]
ATL55_ARATH	5.4e-38	42.52	E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1	[more]
ATL41_ORYSJ	5.4e-30	30.87	E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04...	[more]
ATL51_ARATH	2.3e-28	29.62	RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2	[more]

BLAST of ClCG09G015940 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2P1_CUCSA	4.0e-149	75.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1	[more]
A0A059BC62_EUCGR	5.8e-71	44.56	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1	[more]
B9S9D3_RICCO	6.6e-67	43.50	Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1	[more]
B9HEH8_POPTR	1.9e-66	46.01	Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g P...	[more]
A0A067L9Y9_JATCU	1.6e-65	39.79	Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24933 PE=4 SV=1	[more]

BLAST of ClCG09G015940 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G33565.1	4.5e-51	39.53	RING/U-box superfamily protein	[more]
AT1G72220.1	5.5e-41	35.39	RING/U-box superfamily protein	[more]
AT5G17600.1	5.5e-41	33.33	RING/U-box superfamily protein	[more]
AT5G10380.1	3.0e-39	42.52	RING/U-box superfamily protein	[more]
AT3G03550.1	1.3e-29	29.62	RING/U-box superfamily protein	[more]

BLAST of ClCG09G015940 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659110255\|ref\|XP_008455131.1\|	3.5e-154	76.41	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo]	[more]
gi\|449438582\|ref\|XP_004137067.1\|	5.8e-149	75.00	PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus]	[more]
gi\|702390666\|ref\|XP_010065673.1\|	8.3e-71	44.56	PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis]	[more]
gi\|225465766\|ref\|XP_002266755.1\|	4.2e-67	43.73	PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera]	[more]
gi\|255563198\|ref\|XP_002522602.1\|	9.4e-67	43.50	PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding
GO:0008270	zinc ion binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0016874	ligase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
ClCG09G015940.1	ClCG09G015940.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 156..199 score: 2.6
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 157..198 score: 1.
IPR001841	Zinc finger, RING-type	PROFILE	PS50089	ZF_RING_2	coord: 157..199 score: 12
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 154..203 score: 2.9
None	No IPR available	unknown	Coil	Coil	coord: 236..265 scor
None	No IPR available	PANTHER	PTHR14155	RING FINGER DOMAIN-CONTAINING	coord: 21..224 score: 5.4
None	No IPR available	PANTHER	PTHR14155:SF101	SUBFAMILY NOT NAMED	coord: 21..224 score: 5.4
None	No IPR available	SMART	SM01197	FANCL_C_2	coord: 153..207 score: 0.
None	No IPR available	unknown	SSF57850	RING/U-box	coord: 151..205 score: 1.34

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
ClCG09G015940	Csa7G066300	Cucumber (Chinese Long) v2	cuwcgB514
ClCG09G015940	MELO3C018588	Melon (DHL92) v3.5.1	mewcgB176
ClCG09G015940	Cla012901	Watermelon (97103) v1	wcgwmB009
ClCG09G015940	Cla97C09G177750	Watermelon (97103) v2	wcgwmbB035
ClCG09G015940	Bhi05G000739	Wax gourd	wcgwgoB050
ClCG09G015940	CSPI07G06080	Wild cucumber (PI 183967)	cpiwcgB541
ClCG09G015940	Cucsa.218410	Cucumber (Gy14) v1	cgywcgB392
ClCG09G015940	Lsi03G007300	Bottle gourd (USVL1VR-Ls)	lsiwcgB213
ClCG09G015940	Cp4.1LG15g03610	Cucurbita pepo (Zucchini)	cpewcgB224
ClCG09G015940	CsGy7G005760	Cucumber (Gy14) v2	cgybwcgB473
ClCG09G015940	MELO3C018588.2	Melon (DHL92) v3.6.1	medwcgB171
ClCG09G015940	CsaV3_7G007060	Cucumber (Chinese Long) v3	cucwcgB535

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
ClCG09G015940	Silver-seed gourd	carwcgB0280
ClCG09G015940	Silver-seed gourd	carwcgB0281
ClCG09G015940	Silver-seed gourd	carwcgB0364
ClCG09G015940	Watermelon (97103) v2	wcgwmbB007
ClCG09G015940	Wax gourd	wcgwgoB010
ClCG09G015940	Wax gourd	wcgwgoB033
ClCG09G015940	Watermelon (Charleston Gray)	wcgwcgB004
ClCG09G015940	Cucumber (Gy14) v1	cgywcgB391
ClCG09G015940	Cucurbita maxima (Rimu)	cmawcgB075
ClCG09G015940	Cucurbita maxima (Rimu)	cmawcgB442
ClCG09G015940	Cucurbita maxima (Rimu)	cmawcgB450
ClCG09G015940	Cucurbita moschata (Rifu)	cmowcgB072
ClCG09G015940	Cucurbita moschata (Rifu)	cmowcgB441
ClCG09G015940	Cucurbita moschata (Rifu)	cmowcgB450
ClCG09G015940	Cucurbita moschata (Rifu)	cmowcgB607
ClCG09G015940	Wild cucumber (PI 183967)	cpiwcgB557
ClCG09G015940	Melon (DHL92) v3.5.1	mewcgB168
ClCG09G015940	Cucurbita pepo (Zucchini)	cpewcgB218
ClCG09G015940	Cucurbita pepo (Zucchini)	cpewcgB578
ClCG09G015940	Bottle gourd (USVL1VR-Ls)	lsiwcgB215
ClCG09G015940	Melon (DHL92) v3.6.1	medwcgB159