Cla012901 (gene) Watermelon (97103) v1

Overview
NameCla012901
Typegene
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRING finger protein (AHRD V1 *-*- C6EUD3_SOYBN); contains Interpro domain(s) IPR018957 Zinc finger, C3HC4 RING-type
LocationChr9 : 20564206 .. 20565276 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATTATCTCTCCTCCAGAAAACTCCTCCCAGACGACGAAGACCTCAACAAATCCTGCAAAGACTGCCTCGATTCCCTTACCGATTCTTGCTCTTCTGATTGCATCGAAAAATGCCGAAATTTCTGCTATATCTCAATTCCAATCCCATCGCCCGTCTCAAAATCGCATCACAAACTCTCCAATTTGGTCACCTCCACCATCGCCGTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGTTACGCTATATACGCCCGTTTCTACTCCGGCCGCCGCAGACGGATTCGCCGCGCCGATGCTCCACCGCCCGCGACTCATCACCAGGATGAGTTTCTCGATGAAGAACAGGGCCCTGTTTTGGATCACCCCATTTGGTACATCCGCACCGTCGGCCTCCCGCTGTCCGTCATCGAGGCTATCGCCGTCTGCAAGTTTAAATCCGGTGAGGGTTTGATCGATGGAACAGAGTGCTCTGTTTGTTTGAGCGAATTTGCAGAGGATGAAACCTTGAGGCTTTTGCCAAAGTGTAGCCACGCTTTTCATCTCCCCTGTATTGACACTTGGCTTCGATCTCACACCAATTGCCCCATGTGCCGCGCTCCTGTTGTAGCTCAGTCCACCGCCGCCGCAGCTCCGCCACCGCCGCCGCCTCCTGTGGAAACCCAGATGGGGGATTCGCAGAGGGAAGAGGGAAATGGAGCCAATTTTGGGGAAAGTTCAGCTAGAAATGAACAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCCATTTTCCTGACGAAGGTTTAGAAGAAAGAAGTAGTGATATTCAGCCAGTGAGAAGATCTGTATCACTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGTTTTTTCTGGTGTTAATGAAAAAATAGACTCTGAAGCTGAATCAATGCAGAGAAATGGGAATGGTTTGAAGAAATCATCACAAGGGAGAGGCAATTCTTCATCTGCCATGAACAGGTCAGTTTCTTGCAGTGGGAAGTTCCTAATGAGAAGCTCCACTCAGAGAAGTCATGGAACTAATCACAGTTGA

mRNA sequence

ATGGATTATCTCTCCTCCAGAAAACTCCTCCCAGACGACGAAGACCTCAACAAATCCTGCAAAGACTGCCTCGATTCCCTTACCGATTCTTGCTCTTCTGATTGCATCGAAAAATGCCGAAATTTCTGCTATATCTCAATTCCAATCCCATCGCCCGTCTCAAAATCGCATCACAAACTCTCCAATTTGGTCACCTCCACCATCGCCGTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGTTACGCTATATACGCCCGTTTCTACTCCGGCCGCCGCAGACGGATTCGCCGCGCCGATGCTCCACCGCCCGCGACTCATCACCAGGATGAGTTTCTCGATGAAGAACAGGGCCCTGTTTTGGATCACCCCATTTGGTACATCCGCACCGTCGGCCTCCCGCTGTCCGTCATCGAGGCTATCGCCGTCTGCAAGTTTAAATCCGGTGAGGGTTTGATCGATGGAACAGAGTGCTCTGTTTGTTTGAGCGAATTTGCAGAGGATGAAACCTTGAGGCTTTTGCCAAAGTGTAGCCACGCTTTTCATCTCCCCTGTATTGACACTTGGCTTCGATCTCACACCAATTGCCCCATGTGCCGCGCTCCTGTTGTAGCTCAGTCCACCGCCGCCGCAGCTCCGCCACCGCCGCCGCCTCCTGTGGAAACCCAGATGGGGGATTCGCAGAGGGAAGAGGGAAATGGAGCCAATTTTGGGGAAAGTTCAGCTAGAAATGAACAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCCATTTTCCTGACGAAGGTTTAGAAGAAAGAAGTAGTGATATTCAGCCAGTGAGAAGATCTGTATCACTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGTTTTTTCTGGTGTTAATGAAAAAATAGACTCTGAAGCTGAATCAATGCAGAGAAATGGGAATGGTTTGAAGAAATCATCACAAGGGAGAGGCAATTCTTCATCTGCCATGAACAGGTCAGTTTCTTGCAGTGGGAAGTTCCTAATGAGAAGCTCCACTCAGAGAAGTCATGGAACTAATCACAGTTGA

Coding sequence (CDS)

ATGGATTATCTCTCCTCCAGAAAACTCCTCCCAGACGACGAAGACCTCAACAAATCCTGCAAAGACTGCCTCGATTCCCTTACCGATTCTTGCTCTTCTGATTGCATCGAAAAATGCCGAAATTTCTGCTATATCTCAATTCCAATCCCATCGCCCGTCTCAAAATCGCATCACAAACTCTCCAATTTGGTCACCTCCACCATCGCCGTTCTCTCCTTCACCTTCCTCCTCGTCCTCTGTTACGCTATATACGCCCGTTTCTACTCCGGCCGCCGCAGACGGATTCGCCGCGCCGATGCTCCACCGCCCGCGACTCATCACCAGGATGAGTTTCTCGATGAAGAACAGGGCCCTGTTTTGGATCACCCCATTTGGTACATCCGCACCGTCGGCCTCCCGCTGTCCGTCATCGAGGCTATCGCCGTCTGCAAGTTTAAATCCGGTGAGGGTTTGATCGATGGAACAGAGTGCTCTGTTTGTTTGAGCGAATTTGCAGAGGATGAAACCTTGAGGCTTTTGCCAAAGTGTAGCCACGCTTTTCATCTCCCCTGTATTGACACTTGGCTTCGATCTCACACCAATTGCCCCATGTGCCGCGCTCCTGTTGTAGCTCAGTCCACCGCCGCCGCAGCTCCGCCACCGCCGCCGCCTCCTGTGGAAACCCAGATGGGGGATTCGCAGAGGGAAGAGGGAAATGGAGCCAATTTTGGGGAAAGTTCAGCTAGAAATGAACAACAAGAGCAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAATCCATTTTCCTGACGAAGGTTTAGAAGAAAGAAGTAGTGATATTCAGCCAGTGAGAAGATCTGTATCACTAGATTCTTTATCAGCTCTTAGAATCAGCTCAGTTTTTTCTGGTGTTAATGAAAAAATAGACTCTGAAGCTGAATCAATGCAGAGAAATGGGAATGGTTTGAAGAAATCATCACAAGGGAGAGGCAATTCTTCATCTGCCATGAACAGGTCAGTTTCTTGCAGTGGGAAGTTCCTAATGAGAAGCTCCACTCAGAGAAGTCATGGAACTAATCACAGTTGA

Protein sequence

MDYLSSRKLLPDDEDLNKSCKDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRGNSSSAMNRSVSCSGKFLMRSSTQRSHGTNHS
Homology
[Close]
BLAST of Cla012901 vs. Swiss-Prot
Match: ATL52_ARATH (RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.8e-39
Identity = 116/351 (33.05%), Postives = 163/351 (46.44%), Query Frame = 1 

Query: 25  DSLTDSCSSDCIEKCRNFCYISIPIPSPV-------SKSHHKLSNLVTSTIAVLSFTFLL 84
           DS  D     C   C  +CY+  P P P        S S    S L+ + I +L+   +L
Sbjct: 12  DSYNDCSQGICNIYCPQWCYLIFPPPPPSFFLDDDSSSSSSSFSPLLIALIGILTSALIL 71

Query: 85  VLCYAIYARFYSGRRRRIRRADAPPPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVI 144
           V  Y + +++    R     +       H+ + F    Q    +         GL  S+I
Sbjct: 72  VSYYTLISKYC--HRHHQTSSSETLNLNHNGEGFFSSTQRISTNGD-------GLNESMI 131

Query: 145 EAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPM 204
           ++I V K+KSG+G +DG++CSVCLSEF E+E+LRLLPKC+HAFHLPCIDTWL+SH+NCP+
Sbjct: 132 KSITVYKYKSGDGFVDGSDCSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPL 191

Query: 205 CRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESSARNEQQ----------- 264
           CRA V   +   A+       V     +S  + G+ +    + A  E Q           
Sbjct: 192 CRAFVTGVNNPTASVGQNVSVVVANQSNSAHQTGSVSEINLNLAGYESQTGDFDSVVVIE 251

Query: 265 EQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSGVNEKIDSE 324
           + E      +   E+  P+E  E +  D  P+RRSVSL+S   + I+ V   + E  D E
Sbjct: 252 DLEIGSRNSDARSELQLPEERRETKDEDSLPIRRSVSLNSGVVVSIADV---LREIEDEE 311

Query: 325 AES-----MQRNGNGLKKSSQGRGNS---SSAMNRSVSCSGKFLMRSSTQR 350
            ES      QR   G      G G +   + A  RS   SG F+   ST R
Sbjct: 312 GESGGVGTSQRREEG----EDGDGKTIPPTEANQRSGGVSGFFVRSLSTGR 346

[Close]
BLAST of Cla012901 vs. Swiss-Prot
Match: ATL55_ARATH (E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 9.1e-38
Identity = 91/214 (42.52%), Postives = 121/214 (56.54%), Query Frame = 1 

Query: 35  CIE-KCRNFCYISIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR 94
           C++ K   FC+   P P P      +LS L+ ++I V+  + +L L    +   +  ++R
Sbjct: 12  CLQFKDLRFCFRQYPPPPPPPPPPRELSLLLPTSICVVG-SIILFLFLVFFLYLHITQQR 71

Query: 95  RIRRADAPPPATHHQDEFLDEEQGPVLD-HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLI 154
           RI  A   P  T+ Q++  + E+    D H +W I TVGL  S I +I V  FK GEG+I
Sbjct: 72  RISAASVTPGDTNQQEDEDETEERDFSDFHHVWQIPTVGLHRSAINSITVVGFKKGEGII 131

Query: 155 DGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAP 214
           DGTECSVCL+EF EDE+LRLLPKCSHAFHL CIDTWL SH NCP+CRAPV+  +      
Sbjct: 132 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRAPVLLIT------ 191

Query: 215 PPPPPPVETQMG-DSQREEGNGANFGESSARNEQ 246
              PP  ET+       E  N     + S+R+ +
Sbjct: 192 --EPPHQETETNHQPDSESSNDLRGRQDSSRSRR 216

[Close]
BLAST of Cla012901 vs. Swiss-Prot
Match: ATL54_ARATH (RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2)

HSP 1 Score: 157.5 bits (397), Expect = 2.7e-37
Identity = 93/235 (39.57%), Postives = 131/235 (55.74%), Query Frame = 1 

Query: 46  SIPIPSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRR----ADAP 105
           ++ +PS  S S     +++T T AVL+   +L+  + + A+F+S    R+ +    +D  
Sbjct: 68  AVYLPSQDSSSSLDAISIITITGAVLA---ILLTGFFLVAKFFSDSVNRVNQGTYQSDNE 127

Query: 106 PPATHHQDEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCL 165
              T  ++EF D EQ   +DHPIW IRT GL  S+I +I +C +K G+GLI+ T+C VCL
Sbjct: 128 DNDTVMEEEFQDREQ---VDHPIWLIRTTGLQQSIINSITICNYKRGDGLIERTDCPVCL 187

Query: 166 SEFAEDETLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET 225
           +EF EDE+LRLLPKC+HAFH+ CIDTWL SHTNCP+CRA +   S      P    PVE 
Sbjct: 188 NEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRAGIAMISVTT---PRYSGPVEV 247

Query: 226 QMGDSQREEGNGANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQ 277
             G      G+G++           E +  +EE+  E E     +  E   SDI+
Sbjct: 248 TPG------GSGSHL----------ENDGVDEEDHGEIENRVDSDFKESDDSDIR 277

[Close]
BLAST of Cla012901 vs. Swiss-Prot
Match: ATL41_ORYSJ (E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04g0590900 PE=2 SV=2)

HSP 1 Score: 133.3 bits (334), Expect = 5.4e-30
Identity = 96/308 (31.17%), Postives = 137/308 (44.48%), Query Frame = 1 

Query: 28  TDSCSSD-CIEKCRNFCYISIPIPSPVS--------KSHHKLSNLVTSTIAVLSFTFLLV 87
           T  CS   C   C  +CY   P P P           S    S LV + I VL+  FLLV
Sbjct: 14  TRDCSQGLCSMYCPQWCYFIFPPPPPFDVAGTSADDSSGPVFSPLVIAIIGVLASAFLLV 73

Query: 88  LCYAIYARF---YSGRRRRIRRADAPPPATHHQDEFLDEE-QGPVLDHPIWYIRTV-GLP 147
             Y   +++    S  R R+  + +   A             G    H  W +    GL 
Sbjct: 74  SYYTFISKYCGTVSSLRGRVFGSSSGGAAYGGGAGSGGRHGHGQSRSHESWNVSPPSGLD 133

Query: 148 LSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSHT 207
            ++I  I VCK++ G+G +  T+CSVCL EF++ E+LRLLP+CSHAFH  CIDTWL+SH+
Sbjct: 134 ETLINKITVCKYRRGDGFVHTTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHS 193

Query: 208 NCPMCRAPVVAQSTAAAAPPPPP-PPVETQMGDSQREEGNGANFGESSARNEQQEQEEEE 267
           NCP+CRA +   +   A+P P    P ET  G     E      G  +   EQQE     
Sbjct: 194 NCPLCRANITFVTVGLASPEPEGCAPGET--GGDNTHEVVVVMDGLENLCEEQQEAVSRA 253

Query: 268 EEEEEEEEIHFPDEGLEERSSDIQ------PVRRSVSLDSLSALRISSVFSGVNEKIDSE 315
              +++ +     EG+EE +   +      P +R  S   L       +   + E ++ E
Sbjct: 254 STADDDHDAKDVAEGMEEANGAAEIREEGSPPKRGASSFDLHRDNRMCIADVLQESMEDE 313

[Close]
BLAST of Cla012901 vs. Swiss-Prot
Match: ATL51_ARATH (RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 7.7e-29
Identity = 102/340 (30.00%), Postives = 147/340 (43.24%), Query Frame = 1 

Query: 25  DSLTDSCSSDCIEKCRNFCYISIPIPSPV------SKSHHKLSNLVTSTIAVLSFTFLLV 84
           DS  D     C   C  +CY+  P P           S    S L+ + I +L+  F+LV
Sbjct: 15  DSYRDCSQGVCSVYCPQWCYVIFPPPPSFYLDDEDDSSSSDFSPLLIALIGILASAFILV 74

Query: 85  LCYAIYARFYSGRRRRIRRADAPPPATHHQDEFLDEEQGPVLDHPIWYIRTVG------L 144
             Y + +++   RR       A        D           +      +T+G      L
Sbjct: 75  SYYTLISKYCHRRRHNSSSTSAAAINRISSDYTWQGTNNNNNNGATNPNQTIGGGGGDGL 134

Query: 145 PLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLPCIDTWLRSH 204
             S+I++I V K++  +G ++ ++CSVCLSEF E+E+LRLLPKC+HAFH+PCIDTWL+SH
Sbjct: 135 DESLIKSITVYKYRKMDGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSH 194

Query: 205 TNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESS--ARNEQQEQEE 264
           +NCP+CRA +V  S            +          E N  + G+ S    N   E   
Sbjct: 195 SNCPLCRAFIVTSSAV---------EIVDLTNQQIVTENNSISTGDDSVVVVNLDLENSR 254

Query: 265 EEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDS-LSALRISSVFSGVNEKIDSEAES 324
              E   E     P E  + R  +    RRS SL+S    + I+ +   + +  +S    
Sbjct: 255 SRNETVNEGSTPKPPEMQDSRDGE---ERRSASLNSGGGVVSIADILREIEDDEESAGVG 314

Query: 325 MQR---NGNGLKKSSQGRGNSSSAMNRSVSCSGKFLMRSS 347
             R    G G K        S SA N++   S  FL+RSS
Sbjct: 315 TSRWVEEGEGEKTPPP----SGSAANQTNGIS-NFLVRSS 337

[Close]
BLAST of Cla012901 vs. TrEMBL
Match: A0A0A0K2P1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1)

HSP 1 Score: 540.0 bits (1390), Expect = 2.1e-150
Identity = 280/369 (75.88%), Postives = 312/369 (84.55%), Query Frame = 1 

Query: 1   MDYLSSRKLLPDDEDLNKS-CKDCLDSLTDSCSSDCIEKCRNFCY-ISIPI--------- 60
           MD+ SSRKLL +D+D +K  CKDC D  +DSCSSDC+EKCR++CY I+IPI         
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQD 120
           P+   KS HKLSNLVTSTIA+LSFTFLLVLCYAIYARFY+GRRRRIR  D PPP THHQ 
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120

Query: 121 EFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDET 180
           +FLDEEQGPVLDHPIWYIRT+GLP +VI+AIAVCKFKSGEGLIDGTECSVCLSEF EDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPP-PPPVETQMGDSQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS AAAA PP   PP ETQ+G+ QR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGNGANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLS 300
           EEG+GAN GESSAR       EEE+EE+EE+E HF DE LEERSSDIQP+RRSVSLDSLS
Sbjct: 241 EEGDGANLGESSART------EEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLS 300

Query: 301 ALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRGNSS-SAMNRSVSCSGKFLMRSST 357
           ALRISS F+ VNEK+DSEAE++QRNG   KKSSQGRG+SS S+MNRSVSCS KFLMRSST
Sbjct: 301 ALRISSDFANVNEKMDSEAETIQRNG---KKSSQGRGHSSTSSMNRSVSCSAKFLMRSST 360

[Close]
BLAST of Cla012901 vs. TrEMBL
Match: A0A059BC62_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 9.7e-71
Identity = 169/376 (44.95%), Postives = 213/376 (56.65%), Query Frame = 1 

Query: 19  SCKDCLDSLTDSCSSDCIEKCRNFCYISIP---IPSPVSKSH------------HKLSNL 78
           SC   LD+    C + C++ C + C   IP   +P P                 H LS  
Sbjct: 27  SCHPILDN-GGYCITPCLDVCPDVCRQPIPPLPLPPPCPPEDEPPSLDAYGGRPHHLSPF 86

Query: 79  VTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRAD--APPPATHHQDEFLDEEQGPVLD 138
           +    A L+  F+LV+CYA+YAR+YSGR R   R    A P  +   DEFLD +QGPVLD
Sbjct: 87  LIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDHDQGPVLD 146

Query: 139 HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFH 198
           HPIWYIRTVGLP SVI AI  CK+K GEGLI+GTECSVCLSEF EDETLRLLPKC+HAFH
Sbjct: 147 HPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLPKCNHAFH 206

Query: 199 LPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET-----QMGDSQREEGNGANF 258
           +PCIDTWLRSHTNCP+CRAP+V  + AA A PP  P  E+     +MG  + ++G G   
Sbjct: 207 VPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPERPNAESSASAGEMGIQEVDDGLG--- 266

Query: 259 GESSARNEQQEQEEEEEEEEEEEEIHFPD--EGLEERSSDIQPVRRSVSLDSLSALRISS 318
                  E +   E   E EE+ E+   D  + +E+ S+++QP+RRSVSLDSLSAL+IS 
Sbjct: 267 ------REAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISL 326

Query: 319 V------------------FSGVNE--------KIDSEAESMQRNGNGLKKSSQGRG--N 343
                               +G N         K ++  E       G   SS GR   +
Sbjct: 327 AVANALRGESGSSRKSGPELAGENHGIALTIVPKRNASCEKQPMRSTGSSSSSIGRSLAS 386

[Close]
BLAST of Cla012901 vs. TrEMBL
Match: B9S9D3_RICCO (Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 6.5e-67
Identity = 161/373 (43.16%), Postives = 208/373 (55.76%), Query Frame = 1 

Query: 4   LSSRKLLPDDED---LNKSC--KDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHH 63
           L  RKLL D  +   L+K C  K  L+  T SC   C     ++CY++     P   +H 
Sbjct: 3   LQFRKLLDDSYNETALSKICSSKCVLEEDTYSCDGVC-----SYCYVNCSYKLPPPSTHR 62

Query: 64  KLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR--RIRRADAPPPATHHQDEFLDEEQ 123
            +S        VLS  F LV CYAIY +FYSG RR    +  D     TH  +EFLDE+ 
Sbjct: 63  SISGKFLIAGLVLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTH--EEFLDEDH 122

Query: 124 GPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKC 183
           GP+LDHP+WYI T+GL  SVI +I+VCK+K G+GL++GT+CSVCL+EF EDETLRLLPKC
Sbjct: 123 GPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKC 182

Query: 184 SHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPV----ETQMGDSQREEGN 243
           SHAFH+PCIDTWLRSHTNCP+CRAP+VA S  A +       +    ET++G S+ ++ +
Sbjct: 183 SHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQES 242

Query: 244 GANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRI 303
                E    + +     EEE E E+E      E L      IQP+RRSVSLDSLSA +I
Sbjct: 243 ER---ELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLSAFKI 302

Query: 304 SSVFSG--------------VNEKIDSEAESMQRNGNG------LKKSSQGRG--NSSSA 344
           S                   VNE   S     +R G+       +  SS GR      S+
Sbjct: 303 SQALVSVCPVESDRNSRTGLVNESESSMEIVPKRVGSNQSLLKFMASSSIGRSLQIGPSS 362

[Close]
BLAST of Cla012901 vs. TrEMBL
Match: B9HEH8_POPTR (Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g PE=4 SV=2)

HSP 1 Score: 260.8 bits (665), Expect = 2.5e-66
Identity = 149/315 (47.30%), Postives = 188/315 (59.68%), Query Frame = 1 

Query: 54  SKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQDEFLD 113
           S    KLS +  + I +   T +L  CYAIYA+F   RRRR  + +        +D+F D
Sbjct: 6   SSPQQKLSKIALAMIVLSVITSVLATCYAIYAKFIRPRRRRSTQREEEAEIIETRDQFAD 65

Query: 114 EEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLL 173
           E++G V+DHPIWYIRTVGL  SVI +I V K+KSG+GL++GTECSVCLSEF +DETLRLL
Sbjct: 66  EDEGRVVDHPIWYIRTVGLQPSVIGSIRVFKYKSGDGLVEGTECSVCLSEFQDDETLRLL 125

Query: 174 PKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQR----- 233
           PKCSHAFH+PCIDTWLRSHTNCP+CRAP+V  ++ A A        +T  G+  R     
Sbjct: 126 PKCSHAFHIPCIDTWLRSHTNCPLCRAPIV--TSTAIATSSQANLDDTSSGEETRIEVSE 185

Query: 234 ------EEGNGANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSV 293
                  E  G + G      E+ E + E   EEEEEE+        E    IQP+RRSV
Sbjct: 186 EDQESSREMEGRDGGVRVVTEEESELQSENLNEEEEEEV--------EEEDGIQPLRRSV 245

Query: 294 SLDSLSALRISSVFSGVNEKIDSEAESMQRNGNGLKKSS----QGRGNSSSAMNRSVSCS 353
           SLDSLSA +I    + V+  ++S+  S  R   G   SS    Q RG SS  + RS+SCS
Sbjct: 246 SLDSLSAFKIIQALANVHPAVESDRNSGTRRAGGGDGSSGESVQNRGPSS--LKRSISCS 305

[Close]
BLAST of Cla012901 vs. TrEMBL
Match: A0A067L9Y9_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24933 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-65
Identity = 148/377 (39.26%), Postives = 202/377 (53.58%), Query Frame = 1 

Query: 1   MDYLSSRKLLPDDEDLNKSCKDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHHKL 60
           MD+   + L  ++E  +K C    +     C   C + C+  C    P P P+   HH+ 
Sbjct: 1   MDFRFRKLLSEENETCSKFCVSSDEVSYYYCQGSCWDYCKGNCVFK-PSPPPIITIHHQK 60

Query: 61  SNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQDEFLDEEQGPVL 120
           S     T  VL+  FLLV  YA Y +FYS RRR   R +         +EFLDE+ GP++
Sbjct: 61  SIKFLITGIVLASVFLLVAFYAFYVKFYSRRRRTEEREEQ---RNEIHEEFLDEDHGPII 120

Query: 121 DHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAF 180
           DHPIWYI TVGL  SVI +I+VCK+K  +GL++GT CSVCL+EF EDETLRLLPKCSHAF
Sbjct: 121 DHPIWYINTVGLQPSVINSISVCKYKRTDGLVEGTGCSVCLNEFQEDETLRLLPKCSHAF 180

Query: 181 HLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREEGNGANFGESS 240
           H+PCIDTWLRSHTNCP CRAP+V    +  A         T  G+  R    G       
Sbjct: 181 HIPCIDTWLRSHTNCPNCRAPIVINPNSDRAASSETNVEGTSNGEETRTRVPGTGRESDE 240

Query: 241 ARNEQQEQEEEEEEEEEEEEIHFPD-----EGLEERSSDIQPVRRSVSLDSLSALRIS-- 300
             +   E     +++EEEEE++  +     E L      +QP+RRSVSLDSLSA +IS  
Sbjct: 241 IEDVDGELRSRTDQDEEEEEVNGENRRNRVEDLNGEKDGLQPIRRSVSLDSLSAFKISQG 300

Query: 301 -SVFSGVNEKIDSEAESMQRNGNGLK-KSSQGRGNSS------------------SAMNR 351
            ++   +    +S  E ++++ + +   S +  GN S                  S++ R
Sbjct: 301 LAIVDQIQSDRNSRTEHVKQSESSMGIVSKRFSGNQSLSRFMASSSIARSLQIGPSSLKR 360

[Close]
BLAST of Cla012901 vs. NCBI nr
Match: gi|659110255|ref|XP_008455131.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo])

HSP 1 Score: 557.4 bits (1435), Expect = 1.8e-155
Identity = 286/370 (77.30%), Postives = 315/370 (85.14%), Query Frame = 1 

Query: 1   MDYLSSRKLLP---DDEDLNKSCKDCLDSLTDSCSSDCIEKCRNFCYISIPIPSP----- 60
           MD+LSSRKLL    +D+DL K CKDC D  + SC S C+EKC+N+CYI IPIP P     
Sbjct: 1   MDFLSSRKLLSSDDEDDDLKKLCKDCFDYSSYSCPSYCLEKCKNYCYIHIPIPPPDADDI 60

Query: 61  ----VSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQ 120
                +KS HKLSNLVTSTIA+LSFTFLLVLCYAIYARFYSGRRRRIR  D PPP THHQ
Sbjct: 61  NQTSSTKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYSGRRRRIRLPDPPPPETHHQ 120

Query: 121 DEFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDE 180
            EFLDEEQGPVLDHPIWYIRT+GLP +VI+AIAVCKFKSGEGLIDGTECSVCLSEF EDE
Sbjct: 121 HEFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDE 180

Query: 181 TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPP-PPVETQMGDSQ 240
           TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS+AAAA PPPP PP ETQ+G+ Q
Sbjct: 181 TLRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSSAAAASPPPPRPPAETQIGELQ 240

Query: 241 REEGNGANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSL 300
           REEG+GAN GESSARN     EEE+E++ EEEE HF DE LEERSSDIQPVRRSVSLDSL
Sbjct: 241 REEGDGANLGESSARN-----EEEQEQQHEEEETHFADEDLEERSSDIQPVRRSVSLDSL 300

Query: 301 SALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRG-NSSSAMNRSVSCSGKFLMRSS 357
           SALRISSVF+ VNEK+DS+AE++QR G   KKSSQGRG +S+S+MNRSVSCSGKFLMRSS
Sbjct: 301 SALRISSVFANVNEKLDSDAETIQRKG---KKSSQGRGYSSTSSMNRSVSCSGKFLMRSS 360

[Close]
BLAST of Cla012901 vs. NCBI nr
Match: gi|449438582|ref|XP_004137067.1| (PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus])

HSP 1 Score: 540.0 bits (1390), Expect = 3.0e-150
Identity = 280/369 (75.88%), Postives = 312/369 (84.55%), Query Frame = 1 

Query: 1   MDYLSSRKLLPDDEDLNKS-CKDCLDSLTDSCSSDCIEKCRNFCY-ISIPI--------- 60
           MD+ SSRKLL +D+D +K  CKDC D  +DSCSSDC+EKCR++CY I+IPI         
Sbjct: 1   MDFFSSRKLLSEDDDDHKEFCKDCRDYFSDSCSSDCLEKCRDYCYNINIPIRPPDADHIN 60

Query: 61  PSPVSKSHHKLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQD 120
           P+   KS HKLSNLVTSTIA+LSFTFLLVLCYAIYARFY+GRRRRIR  D PPP THHQ 
Sbjct: 61  PTSSIKSPHKLSNLVTSTIALLSFTFLLVLCYAIYARFYAGRRRRIRLPDPPPPETHHQH 120

Query: 121 EFLDEEQGPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDET 180
           +FLDEEQGPVLDHPIWYIRT+GLP +VI+AIAVCKFKSGEGLIDGTECSVCLSEF EDET
Sbjct: 121 DFLDEEQGPVLDHPIWYIRTIGLPPAVIDAIAVCKFKSGEGLIDGTECSVCLSEFEEDET 180

Query: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPP-PPPVETQMGDSQR 240
           LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQS AAAA PP   PP ETQ+G+ QR
Sbjct: 181 LRLLPKCSHAFHLPCIDTWLRSHTNCPMCRAPVVAQSAAAAASPPQLRPPAETQIGELQR 240

Query: 241 EEGNGANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLS 300
           EEG+GAN GESSAR       EEE+EE+EE+E HF DE LEERSSDIQP+RRSVSLDSLS
Sbjct: 241 EEGDGANLGESSART------EEEQEEQEEQETHFADEDLEERSSDIQPMRRSVSLDSLS 300

Query: 301 ALRISSVFSGVNEKIDSEAESMQRNGNGLKKSSQGRGNSS-SAMNRSVSCSGKFLMRSST 357
           ALRISS F+ VNEK+DSEAE++QRNG   KKSSQGRG+SS S+MNRSVSCS KFLMRSST
Sbjct: 301 ALRISSDFANVNEKMDSEAETIQRNG---KKSSQGRGHSSTSSMNRSVSCSAKFLMRSST 360

[Close]
BLAST of Cla012901 vs. NCBI nr
Match: gi|702390666|ref|XP_010065673.1| (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis])

HSP 1 Score: 275.4 bits (703), Expect = 1.4e-70
Identity = 169/376 (44.95%), Postives = 213/376 (56.65%), Query Frame = 1 

Query: 19  SCKDCLDSLTDSCSSDCIEKCRNFCYISIP---IPSPVSKSH------------HKLSNL 78
           SC   LD+    C + C++ C + C   IP   +P P                 H LS  
Sbjct: 27  SCHPILDN-GGYCITPCLDVCPDVCRQPIPPLPLPPPCPPEDEPPSLDAYGGRPHHLSPF 86

Query: 79  VTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRAD--APPPATHHQDEFLDEEQGPVLD 138
           +    A L+  F+LV+CYA+YAR+YSGR R   R    A P  +   DEFLD +QGPVLD
Sbjct: 87  LIPLFAALAALFVLVVCYAVYARWYSGRPRPRGRGPPRAEPETSVVHDEFLDHDQGPVLD 146

Query: 139 HPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFH 198
           HPIWYIRTVGLP SVI AI  CK+K GEGLI+GTECSVCLSEF EDETLRLLPKC+HAFH
Sbjct: 147 HPIWYIRTVGLPPSVISAITACKYKKGEGLIEGTECSVCLSEFQEDETLRLLPKCNHAFH 206

Query: 199 LPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVET-----QMGDSQREEGNGANF 258
           +PCIDTWLRSHTNCP+CRAP+V  + AA A PP  P  E+     +MG  + ++G G   
Sbjct: 207 VPCIDTWLRSHTNCPLCRAPIV--TIAAQALPPERPNAESSASAGEMGIQEVDDGLG--- 266

Query: 259 GESSARNEQQEQEEEEEEEEEEEEIHFPD--EGLEERSSDIQPVRRSVSLDSLSALRISS 318
                  E +   E   E EE+ E+   D  + +E+ S+++QP+RRSVSLDSLSAL+IS 
Sbjct: 267 ------REAERIAEPRGESEEDGELDLEDGRKRIEDLSNEVQPMRRSVSLDSLSALKISL 326

Query: 319 V------------------FSGVNE--------KIDSEAESMQRNGNGLKKSSQGRG--N 343
                               +G N         K ++  E       G   SS GR   +
Sbjct: 327 AVANALRGESGSSRKSGPELAGENHGIALTIVPKRNASCEKQPMRSTGSSSSSIGRSLAS 386

[Close]
BLAST of Cla012901 vs. NCBI nr
Match: gi|255563198|ref|XP_002522602.1| (PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis])

HSP 1 Score: 262.7 bits (670), Expect = 9.4e-67
Identity = 161/373 (43.16%), Postives = 208/373 (55.76%), Query Frame = 1 

Query: 4   LSSRKLLPDDED---LNKSC--KDCLDSLTDSCSSDCIEKCRNFCYISIPIPSPVSKSHH 63
           L  RKLL D  +   L+K C  K  L+  T SC   C     ++CY++     P   +H 
Sbjct: 3   LQFRKLLDDSYNETALSKICSSKCVLEEDTYSCDGVC-----SYCYVNCSYKLPPPSTHR 62

Query: 64  KLSNLVTSTIAVLSFTFLLVLCYAIYARFYSGRRR--RIRRADAPPPATHHQDEFLDEEQ 123
            +S        VLS  F LV CYAIY +FYSG RR    +  D     TH  +EFLDE+ 
Sbjct: 63  SISGKFLIAGLVLSSVFFLVFCYAIYYKFYSGSRRGRSSQPQDQRNETTH--EEFLDEDH 122

Query: 124 GPVLDHPIWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKC 183
           GP+LDHP+WYI T+GL  SVI +I+VCK+K G+GL++GT+CSVCL+EF EDETLRLLPKC
Sbjct: 123 GPILDHPVWYINTIGLQPSVINSISVCKYKRGDGLVEGTDCSVCLNEFEEDETLRLLPKC 182

Query: 184 SHAFHLPCIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPV----ETQMGDSQREEGN 243
           SHAFH+PCIDTWLRSHTNCP+CRAP+VA S  A +       +    ET++G S+ ++ +
Sbjct: 183 SHAFHIPCIDTWLRSHTNCPLCRAPIVANSARATSSEGTSESLSSGEETRIGVSENDQES 242

Query: 244 GANFGESSARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRI 303
                E    + +     EEE E E+E      E L      IQP+RRSVSLDSLSA +I
Sbjct: 243 ER---ELEGGDGELRVGIEEEREVEDENTRKRSEFLNGEEEGIQPIRRSVSLDSLSAFKI 302

Query: 304 SSVFSG--------------VNEKIDSEAESMQRNGNG------LKKSSQGRG--NSSSA 344
           S                   VNE   S     +R G+       +  SS GR      S+
Sbjct: 303 SQALVSVCPVESDRNSRTGLVNESESSMEIVPKRVGSNQSLLKFMASSSIGRSLQIGPSS 362

[Close]
BLAST of Cla012901 vs. NCBI nr
Match: gi|225465766|ref|XP_002266755.1| (PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera])

HSP 1 Score: 261.5 bits (667), Expect = 2.1e-66
Identity = 163/373 (43.70%), Postives = 215/373 (57.64%), Query Frame = 1 

Query: 7   RKLLPDDEDLNKSCKDCLDSLTDS---CSSDCIEKCRNFCYISIPIPSPVSKSHHKLSNL 66
           RKL  D ++  + C+   DS ++    C   C   C   C  S    SP  K+  KLS  
Sbjct: 6   RKLFSDSDNTTEECRWYCDSGSNDSGICPPSCCSDCPLVCSYSTSTRSPPRKAE-KLSPY 65

Query: 67  VTSTIAVLSFTFLLVLCYAIYARFYSGRRRRIRRADAPPPATHHQDEFLDEEQGPVLDHP 126
           +   ++VL+ TF +V  Y  Y ++YS RRR  RR ++  PA    D+F+DE+Q PV+DHP
Sbjct: 66  LVICLSVLATTFFVVFLYVFYKKYYS-RRRLSRRRNSQAPAEGAHDDFIDEDQEPVVDHP 125

Query: 127 IWYIRTVGLPLSVIEAIAVCKFKSGEGLIDGTECSVCLSEFAEDETLRLLPKCSHAFHLP 186
           IWYIRTVGL  SVI AI +CK+K G+GL++GTECSVCL+EF EDE +RLLPKC+HAFH+P
Sbjct: 126 IWYIRTVGLQPSVISAITICKYKRGDGLVEGTECSVCLAEFEEDEAVRLLPKCNHAFHIP 185

Query: 187 CIDTWLRSHTNCPMCRAPVVAQSTAAAAPPPPPPPVETQMGDSQREE--GNGANFGE-SS 246
           CIDTWL SHTNCPMCRA +V  S+ A AP P      +   +  R E   NG  F E   
Sbjct: 186 CIDTWLSSHTNCPMCRAGIV--SSTAGAPSPEQSVENSGPLEEARVEIPENGGQFEEIED 245

Query: 247 ARNEQQEQEEEEEEEEEEEEIHFPDEGLEERSSDIQPVRRSVSLDSLSALRISSVFSGVN 306
              E +   EEE E    E      E  +E   +IQP+RRSVS+DSLSA  IS   + V+
Sbjct: 246 EVCELRIGREEEGELGGVENERSSCEVAKEEVDEIQPMRRSVSMDSLSASMISLALANVH 305

Query: 307 -EKIDSEAESMQRN--------------GNG-----LKKSSQGR--GNSSSAMNRSVSCS 351
            +K +  ++S   N              GN      ++ SS GR   + S++M RS SCS
Sbjct: 306 PQKSNGNSDSQLANSKKSIMPIVPKRVGGNQSLVKLMESSSMGRILQSGSTSMKRSFSCS 365

The following BLAST results are available for this feature:
BLAST of Cla012901 vs. Swiss-Prot
Match NameE-valueIdentityDescription
ATL52_ARATH4.8e-3933.05RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2 SV=1[more]
ATL55_ARATH9.1e-3842.52E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55 PE=1 SV=1[more]
ATL54_ARATH2.7e-3739.57RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2 SV=2[more]
ATL41_ORYSJ5.4e-3031.17E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp. japonica GN=Os04... [more]
ATL51_ARATH7.7e-2930.00RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2 SV=2[more]
BLAST of Cla012901 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2P1_CUCSA2.1e-15075.88Uncharacterized protein OS=Cucumis sativus GN=Csa_7G066300 PE=4 SV=1[more]
A0A059BC62_EUCGR9.7e-7144.95Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_G00895 PE=4 SV=1[more]
B9S9D3_RICCO6.5e-6743.16Ring finger protein, putative OS=Ricinus communis GN=RCOM_0884200 PE=4 SV=1[more]
B9HEH8_POPTR2.5e-6647.30Uncharacterized protein (Fragment) OS=Populus trichocarpa GN=POPTR_0007s03610g P... [more]
A0A067L9Y9_JATCU2.7e-6539.26Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24933 PE=4 SV=1[more]
BLAST of Cla012901 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659110255|ref|XP_008455131.1|1.8e-15577.30PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo][more]
gi|449438582|ref|XP_004137067.1|3.0e-15075.88PREDICTED: RING-H2 finger protein ATL54 [Cucumis sativus][more]
gi|702390666|ref|XP_010065673.1|1.4e-7044.95PREDICTED: E3 ubiquitin-protein ligase RING1-like [Eucalyptus grandis][more]
gi|255563198|ref|XP_002522602.1|9.4e-6743.16PREDICTED: RING-H2 finger protein ATL54 [Ricinus communis][more]
gi|225465766|ref|XP_002266755.1|2.1e-6643.70PREDICTED: RING-H2 finger protein ATL54 [Vitis vinifera][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005575 cellular_component
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0016874 ligase activity
molecular_function GO:0003674 molecular_function
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
WMU07982watermelon unigene v2 vs TrEMBLtranscribed_cluster
WMU55735watermelon EST collection version 2.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cla012901Cla012901.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
WMU07982WMU07982transcribed_cluster
WMU55735WMU55735transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 156..199
score: 2.5
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 157..198
score: 1.
IPR001841Zinc finger, RING-typePROFILEPS50089ZF_RING_2coord: 157..199
score: 12
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 154..203
score: 2.9
NoneNo IPR availableunknownCoilCoilcoord: 236..262
scor
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 21..224
score: 1.2
NoneNo IPR availablePANTHERPTHR14155:SF101SUBFAMILY NOT NAMEDcoord: 21..224
score: 1.2
NoneNo IPR availableSMARTSM01197FANCL_C_2coord: 153..207
score: 0.
NoneNo IPR availableunknownSSF57850RING/U-boxcoord: 151..205
score: 1.31