Cucsa.196610 (gene) Cucumber (Gy14) v1
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGAGTTAACATATATCAGATTCTCAATTCGAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAGAGAGCTAGTCAAATAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTTCAGAGTTCACATCAAACACATCTCTCTTTCTTATTTCCTGTCTATAAGACCTTCTTGAAAAAAACTCACTCAGTAACCCAGAAAGGCTAAAGAAGCAAAGCCCTTCAGTAAAATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTtATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGAAATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGTTTtACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCCATTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGTATGTGTATGAACTTGTCTTATCTTATCTTATCTTACCTTATCTTCCCTTTGTTTCTGAATTTTCTATCGATTGTCTTTCAATTTAGCTCAAGATTAGAGATGAGTGAAGGACGACCTTACTTGAACAAGATCTGTCTTGTGGGTTGTACAACCGTGTCTTTGAGTTCTTAAGATTAGAGATTAGTGAAGGGTAGCAAAAAACTAAGACTAAAGAATTTCAATATCACTAACAGACACTTATCATTTACTTTGATAGGAGATGGATTACATTGGGGAGTGACTGAAAGGACGGAAGCACTAAAAACACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAACTTGCCAATGAAATAGGCATGAAAACAGAATTTTCAACACTACATTAGAATTAAGAAGAAATAATGAAATGCCAATTGAAGTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTGTTACCTTTGCACACCCACCCTTCATTTCAACCCAAATGTTGTTATTCTTATTATCATTACGTTGGCATGGTCCTAAAGATCAACATTTTTGTTCAAGACTGGGATTTTGACAAGTGTTACAAAAGATGAAAAAGAAAAGGTTAATCCTCCCTCA TGTGAGTTAACATATATCAGATTCTCAATTCGAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAGAGAGCTAGTCAAATAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTTCAGAGTTCACATCAAACACATCTCTCTTTCTTATTTCCTGTCTATAAGACCTTCTTGAAAAAAACTCACTCAGTAACCCAGAAAGGCTAAAGAAGCAAAGCCCTTCAGTAAAATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTTATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGAAATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGTTTTACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCCATTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTACATTGGGGAGTGACTGAAAGGACGGAAGCACTAAAAACACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAACTTGCCAATGAAATAGGCATGAAAACAGAATTTTCAACACTACATTAGAATTAAGAAGAAATAATGAAATGCCAATTGAAGTGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTGTTACCTTTGCACACCCACCCTTCATTTCAACCCAAATGTTGTTATTCTTATTATCATTACGTTGGCATGGTCCTAAAGATCAACATTTTTGTTCAAGACTGGGATTTTGACAAGTGTTACAAAAGATGAAAAAGAAAAGGTTAATCCTCCCTCA ATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTtATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGAAATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGTTTtACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCCATTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTACATTGGGGAGTGACTGAAAGGACGGAAGCACTAAAAACACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAA MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSMEQEKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK*
BLAST of Cucsa.196610 vs. Swiss-Prot
Match: YPF05_PLAF7 (Uncharacterized protein PF11_0207 OS=Plasmodium falciparum (isolate 3D7) GN=PF11_0207 PE=1 SV=2) HSP 1 Score: 63.2 bits (152), Expect = 4.2e-09 Identity = 53/199 (26.63%), Postives = 106/199 (53.27%), Query Frame = 1
HSP 2 Score: 58.9 bits (141), Expect = 7.9e-08 Identity = 56/209 (26.79%), Postives = 105/209 (50.24%), Query Frame = 1
HSP 3 Score: 52.0 bits (123), Expect = 9.7e-06 Identity = 54/213 (25.35%), Postives = 108/213 (50.70%), Query Frame = 1
HSP 4 Score: 35.4 bits (80), Expect = 9.4e-01 Identity = 39/200 (19.50%), Postives = 89/200 (44.50%), Query Frame = 1
BLAST of Cucsa.196610 vs. Swiss-Prot
Match: CFA57_MOUSE (Cilia- and flagella-associated protein 57 OS=Mus musculus GN=Cfap57 PE=1 SV=3) HSP 1 Score: 55.5 bits (132), Expect = 8.7e-07 Identity = 61/217 (28.11%), Postives = 104/217 (47.93%), Query Frame = 1
BLAST of Cucsa.196610 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 1.2e-119 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Cucsa.196610 vs. TrEMBL
Match: A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 6.6e-54 Identity = 117/204 (57.35%), Postives = 152/204 (74.51%), Query Frame = 1
BLAST of Cucsa.196610 vs. TrEMBL
Match: I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 6.6e-54 Identity = 117/204 (57.35%), Postives = 152/204 (74.51%), Query Frame = 1
BLAST of Cucsa.196610 vs. TrEMBL
Match: A0A151U2S2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1) HSP 1 Score: 215.7 bits (548), Expect = 5.6e-53 Identity = 118/220 (53.64%), Postives = 155/220 (70.45%), Query Frame = 1
BLAST of Cucsa.196610 vs. TrEMBL
Match: I1LAN6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 8.1e-52 Identity = 116/204 (56.86%), Postives = 149/204 (73.04%), Query Frame = 1
BLAST of Cucsa.196610 vs. TAIR10
Match: AT3G23930.1 (AT3G23930.1 unknown protein) HSP 1 Score: 127.1 bits (318), Expect = 1.3e-29 Identity = 88/226 (38.94%), Postives = 130/226 (57.52%), Query Frame = 1
BLAST of Cucsa.196610 vs. TAIR10
Match: AT4G13540.1 (AT4G13540.1 unknown protein) HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26 Identity = 78/199 (39.20%), Postives = 116/199 (58.29%), Query Frame = 1
BLAST of Cucsa.196610 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus]) HSP 1 Score: 437.2 bits (1123), Expect = 1.7e-119 Identity = 217/218 (99.54%), Postives = 218/218 (100.00%), Query Frame = 1
BLAST of Cucsa.196610 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo]) HSP 1 Score: 423.7 bits (1088), Expect = 2.0e-115 Identity = 210/218 (96.33%), Postives = 214/218 (98.17%), Query Frame = 1
BLAST of Cucsa.196610 vs. NCBI nr
Match: gi|356575194|ref|XP_003555727.1| (PREDICTED: uncharacterized protein PF11_0207-like [Glycine max]) HSP 1 Score: 218.8 bits (556), Expect = 9.5e-54 Identity = 117/204 (57.35%), Postives = 152/204 (74.51%), Query Frame = 1
BLAST of Cucsa.196610 vs. NCBI nr
Match: gi|1012362388|gb|KYP73571.1| (hypothetical protein KK1_006214 [Cajanus cajan]) HSP 1 Score: 215.7 bits (548), Expect = 8.1e-53 Identity = 118/220 (53.64%), Postives = 155/220 (70.45%), Query Frame = 1
BLAST of Cucsa.196610 vs. NCBI nr
Match: gi|947084820|gb|KRH33541.1| (hypothetical protein GLYMA_10G130200 [Glycine max]) HSP 1 Score: 211.8 bits (538), Expect = 1.2e-51 Identity = 116/204 (56.86%), Postives = 149/204 (73.04%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |