CmoCh11G000790 (gene) Cucurbita moschata (Rifu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGTGAGTTATCGCATATCAGATTCTTAATTCCAATGGGGTCACAGGTCAAATCTCCCTGTTTTTTCATGTATAAAATCATACAGTGACAGCCGTTCACGAGTCTCATAGACATTTCCACTAATCATTAACTCTGAGAGAGCTAGCTAAGTAAGAGCAGGGGATAAGCGAAGCCAATATAGATACCTCAAATGCAGCTCTCTTATGGAAGAGCTTTTGGACAGAGTTCACATCAAACACATCTTTGTCCCTCAATTTCTATCTATAAGACCAGCTTGAAAACTCACTCGGCAACCCAGAAAGGCTGAAGAAGCAAAGGCTTCACTAAGATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTCAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAGAGAGGTCAAAGCCCATGAAAAGGACATGGTGATGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGATACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAGATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGTATGCCTATTCTAAATTTCCTTTTGTTTCTAAATTTTATAGTCTCTGTCTTAGCTGTTAAAATTGAGAATTTAAGATTAGTCGAGCACATTGGATTTTCGATCACTAAAAGGCACTCAATACTTGCTTTGATAGGAGATGGATTGTACTGGGGAGCGAATGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATATAAGAGAGACACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAATCAGATAGAAACCTTCCATAGCTGCGTTTGTAAGTAGCCTGCCAGTGAAGTAAGGAGCACGAAAACAGAAGTTCCAATGAAAAGCCAATTGAAAGTGTTGCTAGAAGCAAATGCATCCAGGAAGCTGTTACTTTTGCACCCCCACCCTTAATTTCAACCCAACTGTTATTTTCATAATCATTTCGTTGGGATGGTCCAATAGGTAAACTTTTTTGTTCTATAGACTGCAATGTTGAGAAAGTTCCAAAAACAATGAGAAAAAAGGGGCTTATCCTGACAGGAAGAAAAAATGGCGCATCAAATGTTCTCATTGAAATTTAGTGATAGATTAATTTCTTTCGATTCAAATTTACAATATCA TGTGAGTTATCGCATATCAGATTCTTAATTCCAATGGGGTCACAGGTCAAATCTCCCTGTTTTTTCATGTATAAAATCATACAGTGACAGCCGTTCACGAGTCTCATAGACATTTCCACTAATCATTAACTCTGAGAGAGCTAGCTAAGTAAGAGCAGGGGATAAGCGAAGCCAATATAGATACCTCAAATGCAGCTCTCTTATGGAAGAGCTTTTGGACAGAGTTCACATCAAACACATCTTTGTCCCTCAATTTCTATCTATAAGACCAGCTTGAAAACTCACTCGGCAACCCAGAAAGGCTGAAGAAGCAAAGGCTTCACTAAGATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTCAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAGAGAGGTCAAAGCCCATGAAAAGGACATGGTGATGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGATACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAGATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGTACTGGGGAGCGAATGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATATAAGAGAGACACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAATCAGATAGAAACCTTCCATAGCTGCGTTTGTAAGTAGCCTGCCAGTGAAGTAAGGAGCACGAAAACAGAAGTTCCAATGAAAAGCCAATTGAAAGTGTTGCTAGAAGCAAATGCATCCAGGAAGCTGTTACTTTTGCACCCCCACCCTTAATTTCAACCCAACTGTTATTTTCATAATCATTTCGTTGGGATGGTCCAATAGGTAAACTTTTTTGTTCTATAGACTGCAATGTTGAGAAAGTTCCAAAAACAATGAGAAAAAAGGGGCTTATCCTGACAGGAAGAAAAAATGGCGCATCAAATGTTCTCATTGAAATTTAGTGATAGATTAATTTCTTTCGATTCAAATTTACAATATCA ATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTCAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAGAGAGGTCAAAGCCCATGAAAAGGACATGGTGATGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGATACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAGATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGTACTGGGGAGCGAATGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATATAAGAGAGACACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAATCAGATAGAAACCTTCCATAGCTGCGTTTGTAAGTAG
BLAST of CmoCh11G000790 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1) HSP 1 Score: 362.5 bits (929), Expect = 3.7e-97 Identity = 188/218 (86.24%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of CmoCh11G000790 vs. TrEMBL
Match: A0A151U2S2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.9e-49 Identity = 118/217 (54.38%), Postives = 157/217 (72.35%), Query Frame = 1
BLAST of CmoCh11G000790 vs. TrEMBL
Match: A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.9e-49 Identity = 120/219 (54.79%), Postives = 159/219 (72.60%), Query Frame = 1
BLAST of CmoCh11G000790 vs. TrEMBL
Match: I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 2.9e-49 Identity = 120/219 (54.79%), Postives = 159/219 (72.60%), Query Frame = 1
BLAST of CmoCh11G000790 vs. TrEMBL
Match: I1LAN6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 2.1e-47 Identity = 118/217 (54.38%), Postives = 155/217 (71.43%), Query Frame = 1
BLAST of CmoCh11G000790 vs. TAIR10
Match: AT3G23930.1 (AT3G23930.1 unknown protein) HSP 1 Score: 117.1 bits (292), Expect = 1.4e-26 Identity = 93/229 (40.61%), Postives = 131/229 (57.21%), Query Frame = 1
BLAST of CmoCh11G000790 vs. TAIR10
Match: AT4G13540.1 (AT4G13540.1 unknown protein) HSP 1 Score: 104.8 bits (260), Expect = 7.0e-23 Identity = 77/197 (39.09%), Postives = 116/197 (58.88%), Query Frame = 1
BLAST of CmoCh11G000790 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus]) HSP 1 Score: 362.5 bits (929), Expect = 5.3e-97 Identity = 188/218 (86.24%), Postives = 199/218 (91.28%), Query Frame = 1
BLAST of CmoCh11G000790 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo]) HSP 1 Score: 361.7 bits (927), Expect = 9.1e-97 Identity = 187/218 (85.78%), Postives = 200/218 (91.74%), Query Frame = 1
BLAST of CmoCh11G000790 vs. NCBI nr
Match: gi|694432063|ref|XP_009343401.1| (PREDICTED: uncharacterized protein LOC103935365 [Pyrus x bretschneideri]) HSP 1 Score: 203.4 bits (516), Expect = 4.1e-49 Identity = 115/227 (50.66%), Postives = 155/227 (68.28%), Query Frame = 1
BLAST of CmoCh11G000790 vs. NCBI nr
Match: gi|356575194|ref|XP_003555727.1| (PREDICTED: uncharacterized protein PF11_0207-like [Glycine max]) HSP 1 Score: 203.4 bits (516), Expect = 4.1e-49 Identity = 120/219 (54.79%), Postives = 159/219 (72.60%), Query Frame = 1
BLAST of CmoCh11G000790 vs. NCBI nr
Match: gi|1012362388|gb|KYP73571.1| (hypothetical protein KK1_006214 [Cajanus cajan]) HSP 1 Score: 203.4 bits (516), Expect = 4.1e-49 Identity = 118/217 (54.38%), Postives = 157/217 (72.35%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |