Cp4.1LG04g15760 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGAAGAATCGTCTAAACTAAAAGAAATTCTAGTTATTTCTTTCAAGTTCAATGATACGTTAAAGTGGAGACTCGAATCTTTAACGAAGAGAGCATACGACGATATAATAACTTAATAAATTGAATTTTGCTAAAATAAACATAAGAAAAAGTTCAAACGAAGTGTCCATCGGCTATGATATGTGTGGACAAGAGAAACTTACCTGTCATGCAATAAGCGTAGAAAGAATTAAAAATAAAAAGAAAAGAAAAAATGTCCAAGTACAACACCACTATTAATACTTTTTCCAAGTTTCAAAGCTTGTAGGCCCTCTTAAAAAGTGCCAGAAATCTACCTAAAGTTACCAAATAATATGAGCGTGATTAAGTTTTTTGTAAAACTTTCTCATGTGAGTTAACACATATCAGATTCTTAATTCCAATGGGGTCACAGGTCAAATCTCCCTGTTTTTTCATGTATAAAATCATACAGTGACAGCCGTTCACGAGTCTCATAGACATTTCCACTAATCATTAACTCTGAGAGAGCTAGCTAAGTAAGAGCAGGGGATAAGCGAAGCCAATATAGATACCTCAAATGCAGCTCTCTTATGGAAGAGCTTTTGGACAGAGTTCACATCAAACACATCTTTGTCCCTCAATTTCTATCTATAAGACCAGCTTGAAAACAAACTCGGCAACCCAGAAAGGCTGAAGAAGCAAAGGCTTCACTAAGATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGGTCAAAGCCCATGAAAAGGACATGGTGATGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGATACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAAATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGTATGCCTATTGTAAATTTCCTTTTGTTTCTAAATTTTGTAGTCTATATATATATCTTAACTAGTTAAACTATGTTCAAGTTGAGAATTTAAGATTAGTCGAGCAGATTTGGATTTTCGATCACTAACAGGCGCTCAATACTTGCTTTGATAGGAGATGGATTGTACTGGGGAGCGAATGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATATAAGAGAGACACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAAACAGATAGAAACCTTCCATAGCTGCGTTTGTAAGTAGCCTGCCAGTGAAGTAAGGAGCACGAAAACAGAAGTTCCAATGAAAAGCCAATTGAAAGTGTTGCTAGAAGCAAATGCATCCAGGAAGCTGTTACTTTTGCACCCCCACCCTTAATTTCAACCCAACTGTTATTTTCATAATCATTCCGTTGGGATGGTCCAATAGGTAAACTTTTTTGGTCTATAGACTGCAATGTTGAGAAAGTTCCAAAAACAATGAGAAAAAAGAGGCTTATCCTGACAGGAAGAAAAAATGGCGCATCAAATGTTCTCATTGAAATTTAGTGATAGATTAATCTCTTTCGATTCAAATTTACAATATGATGATAACTATTGGTCAAGTTCT TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTGAAGAATCGTCTAAACTAAAAGAAATTCTAGTTATTTCTTTCAAGTTCAATGATACGTTAAAGTGGAGACTCGAATCTTTAACGAAGAGAGCATACGACGATATAATAACTTAATAAATTGAATTTTGCTAAAATAAACATAAGAAAAAGTTCAAACGAAGTGTCCATCGGCTATGATATGTGTGGACAAGAGAAACTTACCTGTCATGCAATAAGCGTAGAAAGAATTAAAAATAAAAAGAAAAGAAAAAATGTCCAAGTACAACACCACTATTAATACTTTTTCCAAGTTTCAAAGCTTGTAGGCCCTCTTAAAAAGTGCCAGAAATCTACCTAAAGTTACCAAATAATATGAGCGTGATTAAGTTTTTTGTAAAACTTTCTCATGTGAGTTAACACATATCAGATTCTTAATTCCAATGGGGTCACAGGTCAAATCTCCCTGTTTTTTCATGTATAAAATCATACAGTGACAGCCGTTCACGAGTCTCATAGACATTTCCACTAATCATTAACTCTGAGAGAGCTAGCTAAGTAAGAGCAGGGGATAAGCGAAGCCAATATAGATACCTCAAATGCAGCTCTCTTATGGAAGAGCTTTTGGACAGAGTTCACATCAAACACATCTTTGTCCCTCAATTTCTATCTATAAGACCAGCTTGAAAACAAACTCGGCAACCCAGAAAGGCTGAAGAAGCAAAGGCTTCACTAAGATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGGTCAAAGCCCATGAAAAGGACATGGTGATGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGATACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAAATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGTACTGGGGAGCGAATGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATATAAGAGAGACACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAAACAGATAGAAACCTTCCATAGCTGCGTTTGTAAGTAGCCTGCCAGTGAAGTAAGGAGCACGAAAACAGAAGTTCCAATGAAAAGCCAATTGAAAGTGTTGCTAGAAGCAAATGCATCCAGGAAGCTGTTACTTTTGCACCCCCACCCTTAATTTCAACCCAACTGTTATTTTCATAATCATTCCGTTGGGATGGTCCAATAGGTAAACTTTTTTGGTCTATAGACTGCAATGTTGAGAAAGTTCCAAAAACAATGAGAAAAAAGAGGCTTATCCTGACAGGAAGAAAAAATGGCGCATCAAATGTTCTCATTGAAATTTAGTGATAGATTAATCTCTTTCGATTCAAATTTACAATATGATGATAACTATTGGTCAAGTTCT ATGGGTGTGTGCTCAAGCAAGGGTGGGAGCAATATTTGTGATGATGATGTTGGAGGATTGAAAGAAAAGATAAGGCTGCTTAGGGAGGAAGTGAGAGGAGTAATGTCTGAGATGGATAAAGAGGTCAAAGCCCATGAAAAGGACATGGTGATGTTTGCATTTAAGGAAGCAGATTGGAAAACAGAGAAGAAGAAACTCAGAGAGGAGGTGAAGATGTTGAGGAAGAAGGTAAAAGAGAGGATGACAGAGATTGAAGAGGGAAATTTTGGAGAGAAGACTGCAACAGAATGGGAGATTGAAAGAACTCCAAATACCATCTTTGAGCAGATACAACAGGAAAGAGCACGCAGAGATGAAGCCATTGAGAAATGGAAGCAACTTTATCACGCTATCAAAATTGAGCTCGATGACCTAATTCAGAGAACACATAATGGAGATGGATTGTACTGGGGAGCGAATGAGAGAACAGAAGCACTACAAACGGAATTGCTAGCAAAGGAGGAGACCATAAAGGCCCTCAAAGAACAAGTGGCTTCAATGGAGCAAGAAAAATATAAGAGAGACACAGAAATTGACATACTGAGGCAAAGCTTAAGAATTATGACCAGTAAGAAGGAAAAACAGATAGAAACCTTCCATAGCTGCGTTTGTAAGTAG MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDKEVKAHEKDMVMFAFKEADWKTEKKKLREEVKMLRKKVKERMTEIEEGNFGEKTATEWEIERTPNTIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASMEQEKYKRDTEIDILRQSLRIMTSKKEKQIETFHSCVCK
BLAST of Cp4.1LG04g15760 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.2e-97 Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. TrEMBL
Match: A0A151U2S2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 6.4e-49 Identity = 116/211 (54.98%), Postives = 153/211 (72.51%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. TrEMBL
Match: A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 6.4e-49 Identity = 118/213 (55.40%), Postives = 155/213 (72.77%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. TrEMBL
Match: I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1) HSP 1 Score: 202.2 bits (513), Expect = 6.4e-49 Identity = 118/213 (55.40%), Postives = 155/213 (72.77%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. TrEMBL
Match: I1LAN6_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G130200 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.6e-47 Identity = 116/211 (54.98%), Postives = 151/211 (71.56%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. TAIR10
Match: AT3G23930.1 (AT3G23930.1 unknown protein) HSP 1 Score: 118.6 bits (296), Expect = 4.7e-27 Identity = 94/229 (41.05%), Postives = 132/229 (57.64%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. TAIR10
Match: AT4G13540.1 (AT4G13540.1 unknown protein) HSP 1 Score: 102.8 bits (255), Expect = 2.7e-22 Identity = 79/209 (37.80%), Postives = 122/209 (58.37%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus]) HSP 1 Score: 363.2 bits (931), Expect = 3.1e-97 Identity = 189/218 (86.70%), Postives = 200/218 (91.74%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo]) HSP 1 Score: 362.5 bits (929), Expect = 5.3e-97 Identity = 188/218 (86.24%), Postives = 201/218 (92.20%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. NCBI nr
Match: gi|694432063|ref|XP_009343401.1| (PREDICTED: uncharacterized protein LOC103935365 [Pyrus x bretschneideri]) HSP 1 Score: 203.8 bits (517), Expect = 3.2e-49 Identity = 116/227 (51.10%), Postives = 155/227 (68.28%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. NCBI nr
Match: gi|694448444|ref|XP_009350113.1| (PREDICTED: uncharacterized protein LOC103941627 [Pyrus x bretschneideri]) HSP 1 Score: 203.8 bits (517), Expect = 3.2e-49 Identity = 116/227 (51.10%), Postives = 155/227 (68.28%), Query Frame = 1
BLAST of Cp4.1LG04g15760 vs. NCBI nr
Match: gi|356575194|ref|XP_003555727.1| (PREDICTED: uncharacterized protein PF11_0207-like [Glycine max]) HSP 1 Score: 202.2 bits (513), Expect = 9.2e-49 Identity = 118/213 (55.40%), Postives = 155/213 (72.77%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |