CsaV3_1G001240 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_1G001240
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionGolgin family A protein
Locationchr1 : 703248 .. 705346 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATCTATAGCATGGGAAAAAATGTTCCAAGTACAGCACTACTATTAATACTTTTTCCAAGTTTCAAAGCTTGTAGGGCCTTTTAAAAAGTGCTGCATATCCATCGACTCAAAGTTACCAAATAATATGAGAGTGATGATTTAGTTTTTGCAAAACTTTCTCGTGTGAGTTAACATATATCAGATTCTCAATTCGAATGGGGTCACAGGTCAAATCTGTCTGTATTTTCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATAACTCTGAGAGAGAGCTAGTCAAATAGAGCAAGGGATAAGCACAGCCAATATAGGTACCCCAAATGCAGCTCTTTTATGGAGGAGCTTTTGTTCAGAGTTCACATCAAACACATCTCTCTTTCTTATTTCCTGTCTATAAGACCTTCTTGAAAAAAACTCACTCAGTAACCCAGAAAGGCTAAAGAAGCAAAGCCCTTCAGTAAAATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTTATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGAAATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAAATGTTGAGGAAGAAGGTAAAAGAGAGTTTTACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCCATTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGTATGTGTATGAACTTGTCTTATCTTGTCTTATCTTATCTTATCTTATCTTCCCTTTGTTTCTGAATTTTCTATCGATTGTCTTTCAATTTAGCTCAAGATTAGAGATGAGTGAAGGACGACCTTACTTGAACAAGATCTGTCTTGTGGGTTGTACAACCGTGTCTTTGAGTTCTTAAGATTAGAGATTAGTGAAGGGTAGCAAAAAACTAAGACTAAAGAATTTCAATATCACTAACAGACACTTATCATTTACTTTGATAGGAGATGGATTACATTGGGGAGTGACTGAGAGGACGGAAGCACTAAAAACACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGACAAATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAACTTGCCAATGAAATAGGCATGAAAACAGAATTTTCAACACTACATTAGAATTAAGAAGAAATAATGAAATGCCAATTGAAATGTTACTAGTTGTAAATGTGTCCAGGAAGGTTGTGTTACCTTTGCACACCCACCCTTCATTTCAACCCAAATGTTGTTATTCTTATTATCATTACGTTGGCATGGTCCTAAAGATCAACATTTTTGTTCAAGACTGGGATTTTGACAAGTGTTACAAAAGATGAAAAAGAAAAGGTTAATCCTCCCTCAGTTAACACAGACAATTGAGGCTTAATGATAGATAGATAGGCCTATCATTCAACTTTTATAGTGATCCTAGATTGAGTTATTGTGATTTAAATTTAGAATAGGATGATAATTATTGTTCAAGTTATACCTATACTCAGTTTCACCAAACACTAGTCACTAACACAAGAAGGAATAACTTATATGATAAATAATGTCCAAGTTCTTATATGATCTAAGTTGCATTATGGGACTCTAGCACATCAGTAGGCAGTAACATCCACTATCCAAATTTTGTTAAATCACCCATGAACCAAAAATCTTAAGCTGATAGATTACGTTAAATTTACTAATATCAATGCTTCCACACATTCTCTCTGTTCTACGAACTTGAAAATTATAGTATCAACGTTCCAGCGCTCCTCCCGCACTTTGGACTAAAAACCC

mRNA sequence

ATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTTATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGAAATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAAATGTTGAGGAAGAAGGTAAAAGAGAGTTTTACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCCATTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTACATTGGGGAGTGACTGAGAGGACGGAAGCACTAAAAACACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGACAAATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAA

Coding sequence (CDS)

ATGGGTGTATGCTCAAGCAAAGATGGGAGTGAGATTTTTTATGATGATGTTAAAGGATTGAAAGAAAAGATAAGGCTACTTAGAGAGGAAGTGAGGGGAGTAATCTGCGAAATGGATAAAGAGACTAAAGCACATGAGAAAGACATGGTGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACAGAGAAAAAGAGACTCAAAGAGGAGGTGAAAATGTTGAGGAAGAAGGTAAAAGAGAGTTTTACAGAGATTGAAGAAGGAAATTTTGGAGAGAAGATTGCAACAGAATGGGAAATGGAGGGAACTCCAAATACAATCTTTGAGCAGATACAACAGGAAAGAGCACGAAGAGATGAAGCCATTGAGAAGTGGAAACAACTTTATCACGCTATCAAGATTGAACTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTACATTGGGGAGTGACTGAGAGGACGGAAGCACTAAAAACACAATTACAAGCAAAGGAGGAGACCATAAAAGCCCTCAAAGAACAAGTAGTTTCAATGGAGCAAGACAAATATAAGAGGAACAGAGAAATCGACATACTGAGGCAAAGCTTGAGAATCATGACCAGTAAGAAGGAACAGCAGATAGAAACTTTCCATAAATGCGTCTGTAAGTAA

Protein sequence

MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEEVKMLRKKVKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK
Homology
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BLAST of CsaV3_1G001240 vs. NCBI nr
Match: XP_004138095.1 (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hypothetical protein Csa_1G004180 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 3.3e-111
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. NCBI nr
Match: XP_008464528.1 (PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo])

HSP 1 Score: 377.9 bits (969), Expect = 2.4e-101
Identity = 203/218 (93.12%), Postives = 205/218 (94.04%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVI EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKKR   XXXXXXXXX      IEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA
Sbjct: 61  TEKKRXXXXXXXXXXXXXXXXXXIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGLHWG TERTEALKTQLQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQDKYKRNREIDILRQSLRIMTSKKEQQIET HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. NCBI nr
Match: XP_022931924.1 (uncharacterized protein LOC111438196 [Cucurbita moschata])

HSP 1 Score: 346.7 bits (888), Expect = 5.9e-92
Identity = 187/218 (85.78%), Postives = 198/218 (90.83%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSK GS I  DDV GLKEKIRLLREEVRGV+ EMD+E KAHEKDMV+FAFKEA WK
Sbjct: 1   MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDREVKAHEKDMVMFAFKEADWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKK+L+EXXXXXXXXX E  TEIEEGNFGEK ATEWE+E TPNTIFEQIQQERARRDEA
Sbjct: 61  TEKKKLREXXXXXXXXXXERMTEIEEGNFGEKTATEWEIERTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG  ERTEAL+T+L AKEETIKALKEQV SM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQ+KYKR+ EIDILRQSLRIMTSKKE QIETFH CVCK
Sbjct: 181 EQEKYKRDTEIDILRQSLRIMTSKKENQIETFHSCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. NCBI nr
Match: XP_023530768.1 (uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 343.6 bits (880), Expect = 5.0e-91
Identity = 186/218 (85.32%), Postives = 197/218 (90.37%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSK GS I  DDV GLKEKIRLLREEVRGV+ EMDKE KAHEKDMV+FAFKEA WK
Sbjct: 1   MGVCSSKGGSNICDDDVGGLKEKIRLLREEVRGVMSEMDKEVKAHEKDMVMFAFKEADWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKK+L+ XXXXXXXXX    TEIEEGNFGEK ATEWE+E TPNTIFEQIQQERARRDEA
Sbjct: 61  TEKKKLRXXXXXXXXXXXXRMTEIEEGNFGEKTATEWEIERTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG  ERTEAL+T+L AKEETIKALKEQV SM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGANERTEALQTELLAKEETIKALKEQVASM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQ+KYKR+ EIDILRQSLRIMTSKKE+QIETFH CVCK
Sbjct: 181 EQEKYKRDTEIDILRQSLRIMTSKKEKQIETFHSCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. NCBI nr
Match: XP_023515394.1 (uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.7 bits (857), Expect = 2.3e-88
Identity = 172/218 (78.90%), Postives = 187/218 (85.78%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MG CSSKDGSEI  DDV+GLKEK+RL      GV+ EMDK TKAHEKD +VFAFKEAGWK
Sbjct: 1   MGACSSKDGSEICDDDVRGLKEKVRLXXXXXXGVVSEMDKVTKAHEKDKMVFAFKEAGWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKKRLKE      X   E  TEIEE NFG+K ATE +MEGTPN IF QIQQERA RDEA
Sbjct: 61  TEKKRLKEEVKMLRXRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGL+WG TERT+AL+T+LQAKEETIKALKE++VSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQ+KYKRNR+IDILRQSLRIMTSKKEQQ+ TFHKCVCK
Sbjct: 181 EQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. TAIR10
Match: AT3G23930.1 (unknown protein)

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-17
Identity = 50/119 (42.02%), Postives = 72/119 (60.50%), Query Frame = 0 

Query: 106 IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDG------------LHWGVT 165
           + E++  ERA RDEA+EKWKQLY AIK ELD LI  T +  G                  
Sbjct: 90  VVEEMCVERAVRDEAVEKWKQLYLAIKNELDHLISHTTSSSGEAIMQRKLXXXXXXXXXA 149

Query: 166 ERTEALKTQLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRIMTSKKEQQIETF 213
           +R E L+ +++ K       +EQ+V M++ KY++ REID+LRQSLRI+ SKK+++  +F
Sbjct: 150 KRVEVLRDEVRVKXXXXXXXEEQIVLMDRQKYEKEREIDLLRQSLRILGSKKKKKTGSF 208

[Close]
BLAST of CsaV3_1G001240 vs. TAIR10
Match: AT4G13540.1 (unknown protein)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-15
Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 0 

Query: 106 IFEQIQQERARRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLHW----GVTERTEALKT 165
           + EQ+  ERA R+EA+E+WKQLY AIK ELDDLI  T+ G+ L       V +  + L+ 
Sbjct: 84  VVEQMCLERAVREEAVERWKQLYFAIKNELDDLIHTTY-GEALRQKPQEEVAKAVQELRK 143

Query: 166 QLQAKEETIKALKEQVVSMEQDKYKRNREIDILRQSLRIM 202
           +++A+ ETI+ LK ++  ME+ +  + REID+LRQSLRI+
Sbjct: 144 EVKARGETIETLKGRINLMEKQQNGKEREIDLLRQSLRIL 182

[Close]
BLAST of CsaV3_1G001240 vs. TrEMBL
Match: tr|A0A0A0LS07|A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 2.2e-111
Identity = 218/218 (100.00%), Postives = 218/218 (100.00%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA
Sbjct: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM
Sbjct: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. TrEMBL
Match: tr|A0A1S3CLU2|A0A1S3CLU2_CUCME (uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=4 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 1.6e-101
Identity = 203/218 (93.12%), Postives = 205/218 (94.04%), Query Frame = 0 

Query: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWK 60
           MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVI EMDKETKAHEKDMVVFAFKEA WK
Sbjct: 1   MGVCSSKDGSEIFYDDVKGLKEKIRLLREEVRGVITEMDKETKAHEKDMVVFAFKEASWK 60

Query: 61  TEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120
           TEKKR   XXXXXXXXX      IEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA
Sbjct: 61  TEKKRXXXXXXXXXXXXXXXXXXIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEA 120

Query: 121 IEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTERTEALKTQLQAKEETIKALKEQVVSM 180
           +EKWKQLYHAIKIELDDLIQRTHNGDGLHWG TERTEALKTQLQAKEETIK+LKEQVVSM
Sbjct: 121 VEKWKQLYHAIKIELDDLIQRTHNGDGLHWGATERTEALKTQLQAKEETIKSLKEQVVSM 180

Query: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETFHKCVCK 219
           EQDKYKRNREIDILRQSLRIMTSKKEQQIET HKCVCK
Sbjct: 181 EQDKYKRNREIDILRQSLRIMTSKKEQQIETSHKCVCK 218

[Close]
BLAST of CsaV3_1G001240 vs. TrEMBL
Match: tr|I1NEK7|I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100815580 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 0 

Query: 17  VKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEXXXXXXXX 76
           V  LKEK+RLL+EE++ ++ E +KET+++E+D++VF FKEA WK E KRL+E        
Sbjct: 19  VMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEADWKQEGKRLREEVKQLRSL 78

Query: 77  XK---ESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEAIEKWKQLYHAIKI 136
            +   E   EIE G   +    EWE+ GT   + EQ+++ERARRDEA+EKWKQLY AIKI
Sbjct: 79  VEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERARRDEAVEKWKQLYLAIKI 138

Query: 137 ELDDLIQRTHNGDGLHWGVTE---RTEALKTQLQAKEETIKALKEQVVSMEQDKYKRNRE 196
           ELD+LIQRT++GDGL+W   E   + E LK +LQ K+ETIKALK Q++SME++KYK+ RE
Sbjct: 139 ELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKALKTQLLSMEKEKYKKERE 198

Query: 197 IDILRQSLRIMTSKKEQQIETFHK 215
            D+LRQSLRIM  KK   I+T  K
Sbjct: 199 FDLLRQSLRIMNGKK-NSIQTKEK 220

[Close]
BLAST of CsaV3_1G001240 vs. TrEMBL
Match: tr|A0A0B2P7Y4|A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_046900 PE=4 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.5e-46
Identity = 110/204 (53.92%), Postives = 146/204 (71.57%), Query Frame = 0 

Query: 17  VKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGWKTEKKRLKEXXXXXXXX 76
           V  LKEK+RLL+EE++ ++ E +KET+++E+D++VF FKEA WK E KRL+E        
Sbjct: 19  VMNLKEKVRLLQEEIKEMMYEREKETRSYERDIMVFTFKEADWKQEGKRLREEVKQLRSL 78

Query: 77  XK---ESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDEAIEKWKQLYHAIKI 136
            +   E   EIE G   +    EWE+ GT   + EQ+++ERARRDEA+EKWKQLY AIKI
Sbjct: 79  VEEKDEKIREIEVGMMEKSSEKEWELMGT-KLLVEQMKEERARRDEAVEKWKQLYLAIKI 138

Query: 137 ELDDLIQRTHNGDGLHWGVTE---RTEALKTQLQAKEETIKALKEQVVSMEQDKYKRNRE 196
           ELD+LIQRT++GDGL+W   E   + E LK +LQ K+ETIKALK Q++SME++KYK+ RE
Sbjct: 139 ELDELIQRTYDGDGLYWKAEENDIQMENLKKELQEKDETIKALKTQLLSMEKEKYKKERE 198

Query: 197 IDILRQSLRIMTSKKEQQIETFHK 215
            D+LRQSLRIM  KK   I+T  K
Sbjct: 199 FDLLRQSLRIMNGKK-NSIQTKEK 220

[Close]
BLAST of CsaV3_1G001240 vs. TrEMBL
Match: tr|A0A2N9II15|A0A2N9II15_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51796 PE=4 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 5.5e-46
Identity = 114/210 (54.29%), Postives = 144/210 (68.57%), Query Frame = 0 

Query: 1   MGVCSSKDGS-EIFYDDVKGLKEKIRLLREEVRGVICEMDKETKAHEKDMVVFAFKEAGW 60
           MGV +SK+ S  +   DV+ L E+ R L+ E+  +I E +KETK  E+DM+VF FKEA W
Sbjct: 1   MGVFASKNKSNNLCGKDVRALMERTRFLQNEMNEMIYEREKETKTSEQDMMVFTFKEAEW 60

Query: 61  KTEKKRLKEXXXXXXXXXKESFTEIEEGNFGEKIATEWEMEGTPNTIFEQIQQERARRDE 120
           K EKK+L E          E   +I     GEK   EWE+ GT N + EQ+++ERARRDE
Sbjct: 61  KQEKKKLIEEVKRLRKIVDEKEDKIR--GMGEKSEKEWELLGT-NFLLEQMREERARRDE 120

Query: 121 AIEKWKQLYHAIKIELDDLIQRTHNGDGLHWGVTER----TEALKTQLQAKEETIKALKE 180
           A+EKWKQLY AIK+ELDDLIQRTH GD  +W   E      E L+ +LQAKEETIKALKE
Sbjct: 121 AVEKWKQLYLAIKMELDDLIQRTHRGDVQYWRSEEEDMNMIEELQRELQAKEETIKALKE 180

Query: 181 QVVSMEQDKYKRNREIDILRQSLRIMTSKK 206
           ++ S+E ++Y + REIDILRQSLRIM+SKK
Sbjct: 181 RLASIENEEYNKEREIDILRQSLRIMSSKK 207

The following BLAST results are available for this feature:
BLAST of CsaV3_1G001240 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004138095.13.3e-111100.00PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus] >KGN63552.1 hy... [more]
XP_008464528.12.4e-10193.12PREDICTED: uncharacterized protein LOC103502383 [Cucumis melo][more]
XP_022931924.15.9e-9285.78uncharacterized protein LOC111438196 [Cucurbita moschata][more]
XP_023530768.15.0e-9185.32uncharacterized protein LOC111793218 [Cucurbita pepo subsp. pepo][more]
XP_023515394.12.3e-8878.90uncharacterized protein LOC111779565 [Cucurbita pepo subsp. pepo][more]
BLAST of CsaV3_1G001240 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G23930.15.8e-1742.02unknown protein[more]
AT4G13540.14.2e-1547.00unknown protein[more]
BLAST of CsaV3_1G001240 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsaV3_1G001240 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LS07|A0A0A0LS07_CUCSA2.2e-111100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G004180 PE=4 SV=1[more]
tr|A0A1S3CLU2|A0A1S3CLU2_CUCME1.6e-10193.12uncharacterized protein LOC103502383 OS=Cucumis melo OX=3656 GN=LOC103502383 PE=... [more]
tr|I1NEK7|I1NEK7_SOYBN1.5e-4653.92Uncharacterized protein OS=Glycine max OX=3847 GN=100815580 PE=4 SV=1[more]
tr|A0A0B2P7Y4|A0A0B2P7Y4_GLYSO1.5e-4653.92Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_046900 PE=4 SV=1[more]
tr|A0A2N9II15|A0A2N9II15_FAGSY5.5e-4654.29Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51796 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_1G001240.1CsaV3_1G001240.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 121..141
NoneNo IPR availableCOILSCoilCoilcoord: 156..183
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
NoneNo IPR availableCOILSCoilCoilcoord: 17..37
NoneNo IPR availablePANTHERPTHR37226FAMILY NOT NAMEDcoord: 1..210

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_1G001240CSPI01G01130Wild cucumber (PI 183967)cpicucB001
CsaV3_1G001240Cucsa.196610Cucumber (Gy14) v1cgycucB314
CsaV3_1G001240CmaCh10G001070Cucurbita maxima (Rimu)cmacucB0058
CsaV3_1G001240CmaCh11G000790Cucurbita maxima (Rimu)cmacucB0100
CsaV3_1G001240CmoCh10G001110Cucurbita moschata (Rifu)cmocucB0044
CsaV3_1G001240CmoCh11G000790Cucurbita moschata (Rifu)cmocucB0091
CsaV3_1G001240Cp4.1LG18g08710Cucurbita pepo (Zucchini)cpecucB0442
CsaV3_1G001240Cp4.1LG04g15760Cucurbita pepo (Zucchini)cpecucB0814
CsaV3_1G001240CsGy1G001180Cucumber (Gy14) v2cgybcucB002
CsaV3_1G001240Cla019219Watermelon (97103) v1cucwmB105
CsaV3_1G001240MELO3C026270Melon (DHL92) v3.5.1cucmeB053
CsaV3_1G001240ClCG06G017260Watermelon (Charleston Gray)cucwcgB088
CsaV3_1G001240Lsi06G015800Bottle gourd (USVL1VR-Ls)cuclsiB081
CsaV3_1G001240MELO3C026270.2Melon (DHL92) v3.6.1cucmedB050
CsaV3_1G001240Cla97C06G126940Watermelon (97103) v2cucwmbB076
CsaV3_1G001240Bhi02G000376Wax gourdcucwgoB103
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_1G001240Cucumber (Chinese Long) v3cuccucB002
CsaV3_1G001240Silver-seed gourdcarcucB0395
CsaV3_1G001240Silver-seed gourdcarcucB0530
CsaV3_1G001240Silver-seed gourdcarcucB1047
CsaV3_1G001240Silver-seed gourdcarcucB1095
CsaV3_1G001240Cucumber (Gy14) v2cgybcucB008
CsaV3_1G001240Cucumber (Gy14) v2cgybcucB106
CsaV3_1G001240Cucumber (Gy14) v1cgycucB110
CsaV3_1G001240Cucumber (Gy14) v1cgycucB520
CsaV3_1G001240Cucurbita maxima (Rimu)cmacucB0117
CsaV3_1G001240Cucurbita maxima (Rimu)cmacucB0239
CsaV3_1G001240Cucurbita maxima (Rimu)cmacucB0478
CsaV3_1G001240Cucurbita moschata (Rifu)cmocucB0094
CsaV3_1G001240Cucurbita moschata (Rifu)cmocucB0227
CsaV3_1G001240Cucurbita moschata (Rifu)cmocucB0261
CsaV3_1G001240Cucurbita moschata (Rifu)cmocucB0468
CsaV3_1G001240Cucurbita moschata (Rifu)cmocucB0801
CsaV3_1G001240Cucurbita pepo (Zucchini)cpecucB0023
CsaV3_1G001240Cucurbita pepo (Zucchini)cpecucB0473
CsaV3_1G001240Cucurbita pepo (Zucchini)cpecucB0638
CsaV3_1G001240Wild cucumber (PI 183967)cpicucB012
CsaV3_1G001240Wild cucumber (PI 183967)cpicucB131
CsaV3_1G001240Bottle gourd (USVL1VR-Ls)cuclsiB036
CsaV3_1G001240Bottle gourd (USVL1VR-Ls)cuclsiB049
CsaV3_1G001240Melon (DHL92) v3.5.1cucmeB015
CsaV3_1G001240Melon (DHL92) v3.6.1cucmedB013
CsaV3_1G001240Watermelon (Charleston Gray)cucwcgB002
CsaV3_1G001240Watermelon (Charleston Gray)cucwcgB006
CsaV3_1G001240Watermelon (Charleston Gray)cucwcgB028
CsaV3_1G001240Watermelon (Charleston Gray)cucwcgB100
CsaV3_1G001240Watermelon (97103) v1cucwmB003
CsaV3_1G001240Watermelon (97103) v1cucwmB007
CsaV3_1G001240Watermelon (97103) v1cucwmB056
CsaV3_1G001240Watermelon (97103) v2cucwmbB012
CsaV3_1G001240Watermelon (97103) v2cucwmbB093
CsaV3_1G001240Wax gourdcucwgoB009
CsaV3_1G001240Wax gourdcucwgoB060