Cp4.1LG18g08710 (gene) Cucurbita pepo (Zucchini)
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAACACATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAAAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCTATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAACCTTCACTAAGATGGGTGCATGCTCAAGCAAAGATGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAGTGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACTGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGTATGTCTATGAACTTATCTTTTCTTCTGGTCATCACAGAAAATCTAATTTTCCTTTTGTTTCTGAATTTTCTGTTGATTTTCTTTCAATTTACTACTTTTAAGCTCAAGATTAGTGTTAGAAATCACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTTGTGGTTTTGTTTTTGGGCTTCCCCAGAAGGCCTCGTACGAATGGAGATGTATTCCTTACTTATAAACTCATGATCATTCCCTACATTAGCCAACGTGGGACTCACTCCCCACAATCCTTAACAATTAGATCAATGAAGGCTAGCAAAAACTAAGACGGCAAAAATTCAATAAATGCACATTAGATTTCCCATCACTAACAAGCACTCATCGGTTACTTTGATAGGAGATGGATTATACTGGGGAGCAACTGAGCGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGAACTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAATTGGGCAAGAAAACAAAATTTTCAATACCATATTAGAATGATGAACAGATAATGAAATGTCGATTGAATGTGCTTTGTAAAGATTGTTACCTCTGCACGCCCACCCTTCATTTCAACCCACTGGTCATTCTCATCCTCATTTTGTCGGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAGATAACTGTGCTGATTCATAGATAAGGCTACAATTCAACTTCGATAGACAATCACACAGTTGATCGATTTCTTGGGATTTAAATTTAGAATATAATTATTGCACTATTGTTCAAGTTATAGT TAACACATCAGATTCTGAATTCCGAATGGGGTCACAGGTCATATCTGTCTGTATTTCCTTGTATAAAATGACAGCCATTCACGAGCCTCATAGACGTTTCCACTAATCATTAACTCTGAGAAAGAGCTAACCAAGTAGAGCAAGGGATAAGCACAGCCAAAATATAGGTACCCCAAATGCAGCTCTCTTATGGAGGAGCCTTTCATCTCTCTCCTTTATTTCCAGTCTATAAGGCCAACTTGAAGACTCGCTCAGTAACCCAGAAAGGCTAAAGAAGCAAAACCTTCACTAAGATGGGTGCATGCTCAAGCAAAGATGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAGTGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACTGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGCGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGAACTTTCCATAAATGCGTCTGTAAGTAACCTGCCAATGAATTGGGCAAGAAAACAAAATTTTCAATACCATATTAGAATGATGAACAGATAATGAAATGTCGATTGAATGTGCTTTGTAAAGATTGTTACCTCTGCACGCCCACCCTTCATTTCAACCCACTGGTCATTCTCATCCTCATTTTGTCGGCATGGTCCAAAGGTAAACACATTTTTGTTCCTTAGACTGGGATTTTGGGAAGAGTTGCAAAAGATGAAAAGAAAATAAAAGATTAATCCTCTCTCAGTTGACAGGAAGATAACTGTGCTGATTCATAGATAAGGCTACAATTCAACTTCGATAGACAATCACACAGTTGATCGATTTCTTGGGATTTAAATTTAGAATATAATTATTGCACTATTGTTCAAGTTATAGT ATGGGTGCATGCTCAAGCAAAGATGGGAGTGAGATCTGTGATGATGATGTTAGAGGATTGAAAGAAAAGGTAAGGTTACTTAGAGAGGAAGTGAGGGGTGTAGTGTCTGAGATGGATAAGGTGACTAAAGCTCATGAGAAAGACAAGATGGTTTTTGCATTTAAGGAGGCAGGTTGGAAAACTGAGAAAAAGAGACTCAAAGAGGAGGTGAAGATGTTGAGGAAGAGGGTAAATGAGAGGATTACAGAGATTGAAGAGAGAAATTTTGGAGATAAGACTGCAACAGAGCGAAAGATGGAGGGAACTCCAAATATCATCTTTGGGCAGATACAACAAGAAAGAGCACACAGAGATGAAGCCATTGAGAAGTGGAAGCAGCTTTACCACGCTATCAAGATTGAGCTTGATGACCTAATTCAGAGGACACATAATGGAGATGGATTATACTGGGGAGCAACTGAGCGGACAGACGCACTACGAACAGAATTACAAGCAAAGGAGGAGACAATAAAAGCCCTCAAAGAACGATTAGTTTCAATGGAGCAAGAAAAATATAAGAGGAACAGAGATATTGACATACTGAGGCAAAGCTTGAGAATTATGACCAGTAAGAAGGAACAGCAGCTAGGAACTTTCCATAAATGCGTCTGTAAGTAA MGACSSKDGSEICDDDVRGLKEKVRLLREEVRGVVSEMDKVTKAHEKDKMVFAFKEAGWKTEKKRLKEEVKMLRKRVNERITEIEERNFGDKTATERKMEGTPNIIFGQIQQERAHRDEAIEKWKQLYHAIKIELDDLIQRTHNGDGLYWGATERTDALRTELQAKEETIKALKERLVSMEQEKYKRNRDIDILRQSLRIMTSKKEQQLGTFHKCVCK
BLAST of Cp4.1LG18g08710 vs. TrEMBL
Match: A0A0A0LS07_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G004180 PE=4 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 2.2e-97 Identity = 185/218 (84.86%), Postives = 201/218 (92.20%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. TrEMBL
Match: A0A151U2S2_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_006214 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. TrEMBL
Match: I1NEK7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_20G081000 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.6e-47 Identity = 116/213 (54.46%), Postives = 152/213 (71.36%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. TrEMBL
Match: A0A0B2P7Y4_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_046900 PE=4 SV=1) HSP 1 Score: 196.1 bits (497), Expect = 4.6e-47 Identity = 116/213 (54.46%), Postives = 152/213 (71.36%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. TrEMBL
Match: B9HSX3_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s07300g PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 5.1e-46 Identity = 108/203 (53.20%), Postives = 149/203 (73.40%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. TAIR10
Match: AT3G23930.1 (AT3G23930.1 unknown protein) HSP 1 Score: 119.4 bits (298), Expect = 2.8e-27 Identity = 92/227 (40.53%), Postives = 135/227 (59.47%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. TAIR10
Match: AT4G13540.1 (AT4G13540.1 unknown protein) HSP 1 Score: 95.5 bits (236), Expect = 4.3e-20 Identity = 72/199 (36.18%), Postives = 112/199 (56.28%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: gi|449440646|ref|XP_004138095.1| (PREDICTED: uncharacterized protein LOC101204691 [Cucumis sativus]) HSP 1 Score: 363.2 bits (931), Expect = 3.1e-97 Identity = 185/218 (84.86%), Postives = 201/218 (92.20%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: gi|659129099|ref|XP_008464528.1| (PREDICTED: WD repeat-containing protein 65-like [Cucumis melo]) HSP 1 Score: 357.5 bits (916), Expect = 1.7e-95 Identity = 181/218 (83.03%), Postives = 201/218 (92.20%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: gi|1012362388|gb|KYP73571.1| (hypothetical protein KK1_006214 [Cajanus cajan]) HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47 Identity = 114/211 (54.03%), Postives = 149/211 (70.62%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: gi|356575194|ref|XP_003555727.1| (PREDICTED: uncharacterized protein PF11_0207-like [Glycine max]) HSP 1 Score: 196.1 bits (497), Expect = 6.6e-47 Identity = 116/213 (54.46%), Postives = 152/213 (71.36%), Query Frame = 1
BLAST of Cp4.1LG18g08710 vs. NCBI nr
Match: gi|743896424|ref|XP_011041483.1| (PREDICTED: uncharacterized protein LOC105137444 isoform X1 [Populus euphratica]) HSP 1 Score: 194.5 bits (493), Expect = 1.9e-46 Identity = 108/203 (53.20%), Postives = 150/203 (73.89%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |