Cucsa.181910 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.181910
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Dormancy/auxin associated family protein
Location	scaffold01251 : 119327 .. 121788 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTTCACACCGTTCTCCCCTCTCCCTTCTTCTCTGTAAACCCTTCCGTTGATTGATCCCAATTTCCTCTCTCTACCTTCCGCCGCGAATTACTCTTAAGTCCGCCCTCGCCGTCGTAGCGTTGTTGGCGATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGGTATGCCACAGCGGACCCATAAGTTCTAACCATTCATTTCATTAAAAAGTTTCGTTCTTTTTTtAATACCAAACAGTTTAGTAAGTACTTGACCTTAACAACTAAATATCTGATCTCTTACTTTCTAAAACTTTCAAGATTTGTAACAATTTAGTGACTTAATATGCTATGTTTTATAATTTAAATACAAATACTGTTTATTTTCATATTGCTTACTGGTTTTTACACTTTACACTCCTCTCCGATCCCCTTTTCCTCTAAGACTGTTATATAATTCAGATTAAGTTGGTCCATAGTTCATTACAAACCCTCATACAATAAACTATGGACCCCATATTACTCTAAAACAACAAACTATGGACAATAATTACTAACTATATGTCATGACAGTCCGGACTTAATTGTTATACATTTAAAAGTCCAGTTACTAGCAGAACGATTATTATCTTGGGACGTTGAGTTGACTAGCTATAAGAAGCTCTAACAAAAAACTAAAAGAAAGAAGAGAGCTAGATTTGAAACAATAATAATACGAAAAGTTTAATTATCTCTGTTGCTAATTTGGGAGCAGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGGTAAGTTTCCCAACCACCGTTCCATGATATGCCACTCTAAGTTAAGTATATGTGTGGCTTTTGATTACGTCTTTTTGTGGGGTTTGTGAGCTGTGCCCTTCTCATTGGGCATTCCATTAATCCTAAGTTCTAATAATAATTTTAATTCAATATGTATTGATTATTGTTATTATGAAATGACTATTCTACCCCTCCTTTGTACCTACAAATAATAATGCATTATTCCCAAATTGCCCATACTCTCTTTTTTtGATGTGAAACAAAATATTTCTTTCAATTTCACTCCTACTATGTTTAGCTATGTATATATATACAAACTTTATTCATCAAATTAAAACTTGCCCTAACATGGATTATTTTCTTTTTtCTTTTTtGTTAACTTCAATAATTATAGTCTATAGTGTGAACCATTAATTTTTGAGGTGGTAATTATTAGGGGAAAAAAaTTAAACTATTGAAATACAAATTGTTTAAATTAGTATGTTATAGGAAATATGAGTGTATTATCTAAAAGAAAGAGGGAGATATTGTGTTTTCTTTAAGCATTTTATTTTTGTATGCATTTGTCTTGTAATTTTAATATGTAGGGATAGGGGTTGAGATTTGATTCTTGATATATATTTGTTTGATCGGTCATGAAGGTAATTATTTTTAATAAGTTGAATTGCATCTTAGTGGATCTTGATAAGGGTGGTTTCTTCTTTTTCAATGTGGGGACGAATCTATTTTGTATTTAATGAATCTTTTAATTATGCCCACAAGGCTACTTGATGTTGATTTTTCTAGACATAGATTCATCTACTGTAATTATTTGATGAAAGTAATAAATGTGATTTAAAAAACGATTATGCAACAAGTCAATATTAACATGGTTGGTTCGGTTGTGTTATTACTTACGGAGGTAGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGACAGTGATATCAACTCGATCATAATCTTCGGCCCCAAAACTTTGGATGAGATCAATGACGAGTGAAAATCCTTGTATCTTTTAGGGTTTGCTTAATAATGTCTATAGCTTTTTGTCGAGAAACGTTGAAAGACTTTAGTGAGCCCGTTCGAATTACATAGGTGTGCTTTGGTCATATAATAGATGTGTAGGTTTGTCGTCCCGTGGCCTGCTGAGAATAATTATAGGAAAGGATTTTGTTTGTGTGGTCTTCATGTTCTTTTGTGTATGGTTTGTAGTTTTATCACTTGTAGTAATATCTCTCAGTTGACAATGATGGTGTCTTTACTTTGTGTAAAAGAGAGACCAACATTTTCCTTTTACCTATTTTTTCTGTTTAATTCATCATAATTTTGAGTTATAGTTTAAAAGAATTAATGAGTACCAAAGAGATCTATATATACGTGTTAAAGAATCAA

mRNA sequence

TAACTTCACACCGTTCTCCCCTCTCCCTTCTTCTCTGTAAACCCTTCCGTTGATTGATCCCAATTTCCTCTCTCTACCTTCCGCCGCGAATTACTCTTAAGTCCGCCCTCGCCGTCGTAGCGTTGTTGGCGATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGACAGTGATATCAACTCGATCATAATCTTCGGCCCCAAAACTTTGGATGAGATCAATGACGAGTGAAAATCCTTGTATCTTTTAGGGTTTGCTTAATAATGTCTATAGCTTTTTGTCGAGAAACGTTGAAAGACTTTAGTGAGCCCGTTCGAATTACATAGGTGTGCTTTGGTCATATAATAGATGTGTAGGTTTGTCGTCCCGTGGCCTGCTGAGAATAATTATAGGAAAGGATTTTGTTTGTGTGGTCTTCATGTTCTTTTGTGTATGGTTTGTAGTTTTATCACTTGTAGTAATATCTCTCAGTTGACAATGATGGTGTCTTTACTTTGTGTAAAAGAGAGACCAACATTTTCCTTTTACCTATTTTTTCTGTTTAATTCATCATAATTTTGAGTTATAGTTTAAAAGAATTAATGAGTACCAAAGAGATCTATATATACGTGTTAAAGAATCAA

Coding sequence (CDS)

ATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGA

Protein sequence

MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSELGLLLLLLTCEI*

Homology

[Close]

BLAST of Cucsa.181910 vs. Swiss-Prot
Match: DRMH3_ARATH (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana GN=At1g56220 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.5e-19
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAA---VKESSNGKRYEEGVVMSSSSS 60
          MGLLD LWDDT+AGP P++GLGKLRKH + + R ++     E+ + + Y E      S  
Sbjct: 1  MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGE-----DSLP 60

Query: 61 EDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS 98
          E++VKV+R IMI+KPP GYQ  S P SP A STPP SPFS
Sbjct: 61 EEAVKVTRSIMIIKPP-GYQGSSAPASP-AGSTPPLSPFS 93

[Close]

BLAST of Cucsa.181910 vs. Swiss-Prot
Match: DRMH4_ARATH (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana GN=At1g54070 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.8e-10
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MG L +LWD+T+AGPTPD+GLGKLRKH SL++                  V SS  S  S
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLST------------------VRSSPPSLSS 60

Query: 61 VKVSRRIMIVK----PPGGYQYGSPPVSPAASSTPPSSPFS 98
           +V+R IM+ K      G  +    P SP  SS+ P +P +
Sbjct: 61 DQVTRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]

BLAST of Cucsa.181910 vs. TrEMBL
Match: A0A0A0LWE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569400 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-47
Identity = 103/122 (84.43%), Postives = 105/122 (86.07%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS     F   R  T     +  SE
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRE-SFRFRRRSTSDAYGKTTSE 120

Query: 121 LG 123
           +G
Sbjct: 121 VG 121

[Close]

BLAST of Cucsa.181910 vs. TrEMBL
Match: A0A067EYB5_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-28
Identity = 78/133 (58.65%), Postives = 92/133 (69.17%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP P+SGLGKLRKH S + RS++ KES  G      V     +  D+
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKHSSFSFRSSSGKESDGGNVIRSDV---DETPMDA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS-ENHLDFEEDRHRTLMGRRQVKS 120
           +KV+R IMIVKPP GYQ GSPPVSP A STPP SPFS E    F ED H+T   RR ++ 
Sbjct: 61  MKVTRSIMIVKPP-GYQSGSPPVSP-AGSTPPVSPFSAETLFGFAEDLHQT-HTRRGMRL 120

Query: 121 ELGLLLLLLTCEI 133
           + G LLLL TC+I
Sbjct: 121 DSGALLLLTTCDI 127

[Close]

BLAST of Cucsa.181910 vs. TrEMBL
Match: A0A067EMB6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 7.2e-27
Identity = 76/132 (57.58%), Postives = 90/132 (68.18%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP P+SGLGKLRKH S + RS++ KES  G      V     +  D+
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKHSSFSFRSSSGKESDGGNVIRSDV---DETPMDA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
           +KV+R IMIVKPP GYQ GSPPVSP A STPP SPFS       ED H+T   RR ++ +
Sbjct: 61  MKVTRSIMIVKPP-GYQSGSPPVSP-AGSTPPVSPFS------AEDLHQT-HTRRGMRLD 120

Query: 121 LGLLLLLLTCEI 133
            G LLLL TC+I
Sbjct: 121 SGALLLLTTCDI 120

[Close]

BLAST of Cucsa.181910 vs. TrEMBL
Match: V4TAR9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002843mg PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-26
Identity = 74/132 (56.06%), Postives = 89/132 (67.42%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP P+SGLGKLRKH S + RS++ KES  G      V     +  D+
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKHSSFSFRSSSGKESDGGNVIRSDV---DETPMDA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
           +KV+R IMIVKPP GYQ GSPPVSP A STP   P +E    F ED H+T   RR ++ +
Sbjct: 61  MKVTRSIMIVKPP-GYQSGSPPVSP-AGSTP---PVAETLFGFAEDLHQT-HTRRGMRLD 120

Query: 121 LGLLLLLLTCEI 133
            G LLLL TC+I
Sbjct: 121 SGALLLLTTCDI 123

[Close]

BLAST of Cucsa.181910 vs. TrEMBL
Match: A0A067EM15_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.9e-26
Identity = 74/132 (56.06%), Postives = 89/132 (67.42%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP P+SGLGKLRKH S + RS++ KES  G      V     +  D+
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKHSSFSFRSSSGKESDGGNVIRSDV---DETPMDA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
           +KV+R IMIVKPP GYQ GSPPVSP A STP   P +E    F ED H+T   RR ++ +
Sbjct: 61  MKVTRSIMIVKPP-GYQSGSPPVSP-AGSTP---PVAETLFGFAEDLHQT-HTRRGMRLD 120

Query: 121 LGLLLLLLTCEI 133
            G LLLL TC+I
Sbjct: 121 SGALLLLTTCDI 123

[Close]

BLAST of Cucsa.181910 vs. TAIR10
Match: AT1G56220.3 (AT1G56220.3 Dormancy/auxin associated family protein)

HSP 1 Score: 95.9 bits (237), Expect = 2.0e-20
Identity = 54/100 (54.00%), Postives = 68/100 (68.00%), Query Frame = 1


Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAA---VKESSNGKRYEEGVVMSSSSS 60
          MGLLD LWDDT+AGP P++GLGKLRKH + + R ++     E+ + + Y E      S  
Sbjct: 1  MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGE-----DSLP 60

Query: 61 EDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS 98
          E++VKV+R IMI+KPP GYQ  S P SP A STPP SPFS
Sbjct: 61 EEAVKVTRSIMIIKPP-GYQGSSAPASP-AGSTPPLSPFS 93

[Close]

BLAST of Cucsa.181910 vs. TAIR10
Match: AT1G54070.1 (AT1G54070.1 Dormancy/auxin associated family protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MG L +LWD+T+AGPTPD+GLGKLRKH SL++                  V SS  S  S
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLST------------------VRSSPPSLSS 60

Query: 61 VKVSRRIMIVK----PPGGYQYGSPPVSPAASSTPPSSPFS 98
           +V+R IM+ K      G  +    P SP  SS+ P +P +
Sbjct: 61 DQVTRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]

BLAST of Cucsa.181910 vs. NCBI nr
Match: gi|778662447|ref|XP_011659889.1| (PREDICTED: uncharacterized protein LOC101205077 isoform X2 [Cucumis sativus])

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-63
Identity = 128/132 (96.97%), Postives = 128/132 (96.97%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS    DFEEDRHRTLMGRRQVKSE
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS----DFEEDRHRTLMGRRQVKSE 120

Query: 121 LGLLLLLLTCEI 133
           LGLLLLLLTCEI
Sbjct: 121 LGLLLLLLTCEI 128

[Close]

BLAST of Cucsa.181910 vs. NCBI nr
Match: gi|449435651|ref|XP_004135608.1| (PREDICTED: uncharacterized protein LOC101205077 isoform X1 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-47
Identity = 103/122 (84.43%), Postives = 105/122 (86.07%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS     F   R  T     +  SE
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRE-SFRFRRRSTSDAYGKTTSE 120

Query: 121 LG 123
           +G
Sbjct: 121 VG 121

[Close]

BLAST of Cucsa.181910 vs. NCBI nr
Match: gi|659099501|ref|XP_008450631.1| (PREDICTED: uncharacterized protein LOC103492161 [Cucumis melo])

HSP 1 Score: 177.9 bits (450), Expect = 1.1e-41
Identity = 96/128 (75.00%), Postives = 102/128 (79.69%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSS--- 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA KES+NGKRYEEG+++SSSSS   
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKESNNGKRYEEGIMLSSSSSAAA 60

Query: 61  --EDSVKVSRRIMIVKPPGGYQYG-SPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGR 120
             ED VKVSRRIMIVKPPGGYQYG SPPVSPAASSTPPSSPFS     F   R  T    
Sbjct: 61  AAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFSGRE-SFRFRRRSTSDAY 120

Query: 121 RQVKSELG 123
            +  SE+G
Sbjct: 121 GKTTSEVG 127

[Close]

BLAST of Cucsa.181910 vs. NCBI nr
Match: gi|1000981105|ref|XP_015570608.1| (PREDICTED: uncharacterized protein LOC8287105 isoform X2 [Ricinus communis])

HSP 1 Score: 142.9 bits (359), Expect = 4.0e-31
Identity = 79/132 (59.85%), Postives = 94/132 (71.21%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP PD+GLGKLRKH +   RS   KES      + G  +   +SE+ 
Sbjct: 1   MGLLDQLWDDTVAGPPPDNGLGKLRKHSTFNFRSTTGKESDG----QNGRSLGDDASEEV 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
            KV+R IMIVKPP GYQ+GSPPVSP A STPP SPFSE+   FEEDRH+  M RRQ + +
Sbjct: 61  TKVTRSIMIVKPP-GYQFGSPPVSP-AGSTPPVSPFSESPFAFEEDRHQMHM-RRQARLD 120

Query: 121 LGLLLLLLTCEI 133
            G+LLLL T +I
Sbjct: 121 PGVLLLLTTSDI 125

[Close]

BLAST of Cucsa.181910 vs. NCBI nr
Match: gi|823197149|ref|XP_012434183.1| (PREDICTED: uncharacterized protein LOC105761064 isoform X2 [Gossypium raimondii])

HSP 1 Score: 140.2 bits (352), Expect = 2.6e-30
Identity = 77/132 (58.33%), Postives = 91/132 (68.94%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP PD+GLGKLRKH + T R  + KES  G     G      + E++
Sbjct: 1   MGLLDQLWDDTVAGPRPDNGLGKLRKHSTFTFRPNSAKESDGGSLRSYG----DEAPEEA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSENHLDFEEDRHRTLMGRRQVKSE 120
            +V+R IMIVKPP GYQ GSPPVSP A STPP SPFSENH+ F E  HR +  RR  + +
Sbjct: 61  TRVTRSIMIVKPP-GYQSGSPPVSP-AGSTPPVSPFSENHIGFGEGPHR-MHTRRLTRLD 120

Query: 121 LGLLLLLLTCEI 133
            G L+LL TCEI
Sbjct: 121 QGALVLLTTCEI 125

The following BLAST results are available for this feature:

BLAST of Cucsa.181910 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRMH3_ARATH	3.5e-19	54.00	Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana GN=At1g56220 PE=1 ...	[more]
DRMH4_ARATH	8.8e-10	40.59	Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana GN=At1g54070 PE=3 ...	[more]

BLAST of Cucsa.181910 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWE4_CUCSA	1.3e-47	84.43	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569400 PE=4 SV=1	[more]
A0A067EYB5_CITSI	2.9e-28	58.65	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1	[more]
A0A067EMB6_CITSI	7.2e-27	57.58	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1	[more]
V4TAR9_9ROSI	7.9e-26	56.06	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002843mg PE=4 SV=1	[more]
A0A067EM15_CITSI	7.9e-26	56.06	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1	[more]

BLAST of Cucsa.181910 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56220.3	2.0e-20	54.00	Dormancy/auxin associated family protein	[more]
AT1G54070.1	4.9e-11	40.59	Dormancy/auxin associated family protein	[more]

BLAST of Cucsa.181910 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778662447\|ref\|XP_011659889.1\|	1.8e-63	96.97	PREDICTED: uncharacterized protein LOC101205077 isoform X2 [Cucumis sativus]	[more]
gi\|449435651\|ref\|XP_004135608.1\|	1.8e-47	84.43	PREDICTED: uncharacterized protein LOC101205077 isoform X1 [Cucumis sativus]	[more]
gi\|659099501\|ref\|XP_008450631.1\|	1.1e-41	75.00	PREDICTED: uncharacterized protein LOC103492161 [Cucumis melo]	[more]
gi\|1000981105\|ref\|XP_015570608.1\|	4.0e-31	59.85	PREDICTED: uncharacterized protein LOC8287105 isoform X2 [Ricinus communis]	[more]
gi\|823197149\|ref\|XP_012434183.1\|	2.6e-30	58.33	PREDICTED: uncharacterized protein LOC105761064 isoform X2 [Gossypium raimondii]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR008406	DRM/ARP
IPR008406	DRM/ARP
IPR008406	DRM/ARP
IPR008406	DRM/ARP

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.181910.1	Cucsa.181910.1	mRNA
Cucsa.181910.2	Cucsa.181910.2	mRNA
Cucsa.181910.3	Cucsa.181910.3	mRNA
Cucsa.181910.4	Cucsa.181910.4	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008406	Dormancy/auxin associated protein	PFAM	PF05564	Auxin_repressed	coord: 7..63 score: 2.
None	No IPR available	PANTHER	PTHR33565	FAMILY NOT NAMED	coord: 2..99 score: 3.8
None	No IPR available	PANTHER	PTHR33565:SF1	DORMANCY/AUXIN ASSOCIATED PROTEIN	coord: 2..99 score: 3.8

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.181910	Cla005219	Watermelon (97103) v1	cgywmB348
Cucsa.181910	Csa1G569400	Cucumber (Chinese Long) v2	cgycuB278
Cucsa.181910	MELO3C015306	Melon (DHL92) v3.5.1	cgymeB328
Cucsa.181910	ClCG03G017140	Watermelon (Charleston Gray)	cgywcgB324
Cucsa.181910	CSPI01G26460	Wild cucumber (PI 183967)	cgycpiB288
Cucsa.181910	CmaCh11G011390	Cucurbita maxima (Rimu)	cgycmaB0519
Cucsa.181910	CmaCh12G010550	Cucurbita maxima (Rimu)	cgycmaB0520
Cucsa.181910	CmoCh12G010670	Cucurbita moschata (Rifu)	cgycmoB0521
Cucsa.181910	CmoCh11G011820	Cucurbita moschata (Rifu)	cgycmoB0519
Cucsa.181910	Lsi06G001120	Bottle gourd (USVL1VR-Ls)	cgylsiB304
Cucsa.181910	Cp4.1LG04g00480	Cucurbita pepo (Zucchini)	cgycpeB0500
Cucsa.181910	MELO3C015306.2	Melon (DHL92) v3.6.1	cgymedB323
Cucsa.181910	CsaV3_1G038820	Cucumber (Chinese Long) v3	cgycucB293
Cucsa.181910	Cla97C03G067480	Watermelon (97103) v2	cgywmbB328
Cucsa.181910	Bhi02G001759	Wax gourd	cgywgoB373
Cucsa.181910	Carg25026	Silver-seed gourd	carcgyB0290

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.181910	Wax gourd	cgywgoB372
Cucsa.181910	Cucurbita maxima (Rimu)	cgycmaB0517
Cucsa.181910	Cucurbita moschata (Rifu)	cgycmoB0517
Cucsa.181910	Cucurbita pepo (Zucchini)	cgycpeB0499