Cucsa.181910.2 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.181910.2
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Dormancy/auxin associated family protein
Location	scaffold01251 : 119327 .. 121788 (+)
Sequence length	990

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAACTTCACACCGTTCTCCCCTCTCCCTTCTTCTCTGTAAACCCTTCCGTTGATTGATCCCAATTTCCTCTCTCTACCTTCCGCCGCGAATTACTCTTAAGTCCGCCCTCGCCGTCGTAGCGTTGTTGGCGATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGGTATGCCACAGCGGACCCATAAGTTCTAACCATTCATTTCATTAAAAAGTTTCGTTCTTTTTTtAATACCAAACAGTTTAGTAAGTACTTGACCTTAACAACTAAATATCTGATCTCTTACTTTCTAAAACTTTCAAGATTTGTAACAATTTAGTGACTTAATATGCTATGTTTTATAATTTAAATACAAATACTGTTTATTTTCATATTGCTTACTGGTTTTTACACTTTACACTCCTCTCCGATCCCCTTTTCCTCTAAGACTGTTATATAATTCAGATTAAGTTGGTCCATAGTTCATTACAAACCCTCATACAATAAACTATGGACCCCATATTACTCTAAAACAACAAACTATGGACAATAATTACTAACTATATGTCATGACAGTCCGGACTTAATTGTTATACATTTAAAAGTCCAGTTACTAGCAGAACGATTATTATCTTGGGACGTTGAGTTGACTAGCTATAAGAAGCTCTAACAAAAAACTAAAAGAAAGAAGAGAGCTAGATTTGAAACAATAATAATACGAAAAGTTTAATTATCTCTGTTGCTAATTTGGGAGCAGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGGTAAGTTTCCCAACCACCGTTCCATGATATGCCACTCTAAGTTAAGTATATGTGTGGCTTTTGATTACGTCTTTTTGTGGGGTTTGTGAGCTGTGCCCTTCTCATTGGGCATTCCATTAATCCTAAGTTCTAATAATAATTTTAATTCAATATGTATTGATTATTGTTATTATGAAATGACTATTCTACCCCTCCTTTGTACCTACAAATAATAATGCATTATTCCCAAATTGCCCATACTCTCTTTTTTtGATGTGAAACAAAATATTTCTTTCAATTTCACTCCTACTATGTTTAGCTATGTATATATATACAAACTTTATTCATCAAATTAAAACTTGCCCTAACATGGATTATTTTCTTTTTtCTTTTTtGTTAACTTCAATAATTATAGTCTATAGTGTGAACCATTAATTTTTGAGGTGGTAATTATTAGGGGAAAAAAaTTAAACTATTGAAATACAAATTGTTTAAATTAGTATGTTATAGGAAATATGAGTGTATTATCTAAAAGAAAGAGGGAGATATTGTGTTTTCTTTAAGCATTTTATTTTTGTATGCATTTGTCTTGTAATTTTAATATGTAGGGATAGGGGTTGAGATTTGATTCTTGATATATATTTGTTTGATCGGTCATGAAGGTAATTATTTTTAATAAGTTGAATTGCATCTTAGTGGATCTTGATAAGGGTGGTTTCTTCTTTTTCAATGTGGGGACGAATCTATTTTGTATTTAATGAATCTTTTAATTATGCCCACAAGGCTACTTGATGTTGATTTTTCTAGACATAGATTCATCTACTGTAATTATTTGATGAAAGTAATAAATGTGATTTAAAAAACGATTATGCAACAAGTCAATATTAACATGGTTGGTTCGGTTGTGTTATTACTTACGGAGGTAGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGACAGTGATATCAACTCGATCATAATCTTCGGCCCCAAAACTTTGGATGAGATCAATGACGAGTGAAAATCCTTGTATCTTTTAGGGTTTGCTTAATAATGTCTATAGCTTTTTGTCGAGAAACGTTGAAAGACTTTAGTGAGCCCGTTCGAATTACATAGGTGTGCTTTGGTCATATAATAGATGTGTAGGTTTGTCGTCCCGTGGCCTGCTGAGAATAATTATAGGAAAGGATTTTGTTTGTGTGGTCTTCATGTTCTTTTGTGTATGGTTTGTAGTTTTATCACTTGTAGTAATATCTCTCAGTTGACAATGATGGTGTCTTTACTTTGTGTAAAAGAGAGACCAACATTTTCCTTTTACCTATTTTTTCTGTTTAATTCATCATAATTTTGAGTTATAGTTTAAAAGAATTAATGAGTACCAAAGAGATCTATATATACGTGTTAAAGAATCAA

mRNA sequence

TAACTTCACACCGTTCTCCCCTCTCCCTTCTTCTCTGTAAACCCTTCCGTTGATTGATCCCAATTTCCTCTCTCTACCTTCCGCCGCGAATTACTCTTAAGTCCGCCCTCGCCGTCGTAGCGTTGTTGGCGATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGGTAGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGAGATATGACAGTGATATCAACTCGATCATAATCTTCGGCCCCAAAACTTTGGATGAGATCAATGACGAGTGAAAATCCTTGTATCTTTTAGGGTTTGCTTAATAATGTCTATAGCTTTTTGTCGAGAAACGTTGAAAGACTTTAGTGAGCCCGTTCGAATTACATAGGTGTGCTTTGGTCATATAATAGATGTGTAGGTTTGTCGTCCCGTGGCCTGCTGAGAATAATTATAGGAAAGGATTTTGTTTGTGTGGTCTTCATGTTCTTTTGTGTATGGTTTGTAGTTTTATCACTTGTAGTAATATCTCTCAGTTGACAATGATGGTGTCTTTACTTTGTGTAAAAGAGAGACCAACATTTTCCTTTTACCTATTTTTTCTGTTTAATTCATCATAATTTTGAGTTATAGTTTAAAAGAATTAATGAGTACCAAAGAGATCTATATATACGTGTTAAAGAATCAA

Coding sequence (CDS)

ATGGGACTATTGGATCAGCTCTGGGATGACACGCTTGCCGGACCGACCCCGGATTCCGGCCTCGGCAAGCTCAGGAAGCACCCATCTCTCACTTCCCGATCCGCCGCCGTGAAGGAATCCTCCAATGGGAAGAGGTACGAGGAAGGAGTAGTAATGTCGTCATCGTCCTCGGAGGATAGTGTGAAAGTTTCTCGGAGGATTATGATCGTAAAGCCACCTGGTGGTTACCAGTATGGTTCACCGCCGGTGTCGCCTGCCGCCTCTTCCACTCCACCGTCATCTCCTTTTTCCGGTAGAGAATCATTTAGATTTCGAAGAAGATCGACATCGGACGCTTATGGGAAGACGACAAGTGAAGTCGGAGCTCGGACTCCTACTTCTCCTTTTGACATGTGA

Protein sequence

MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEVGARTPTSPFDM*

Homology

[Close]

BLAST of Cucsa.181910.2 vs. Swiss-Prot
Match: DRMH3_ARATH (Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana GN=At1g56220 PE=1 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26
Identity = 73/144 (50.69%), Postives = 91/144 (63.19%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAA---VKESSNGKRYEEGVVMSSSSS 60
           MGLLD LWDDT+AGP P++GLGKLRKH + + R ++     E+ + + Y E      S  
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGE-----DSLP 60

Query: 61  EDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS--------GRESFRFRRRST 120
           E++VKV+R IMI+KPP GYQ  S P SP A STPP SPFS        G+E FRFRRRST
Sbjct: 61  EEAVKVTRSIMIIKPP-GYQGSSAPASP-AGSTPPLSPFSPPLSPFSGGKEPFRFRRRST 120

Query: 121 SDAYGKTT--SEVGARTPTSPFDM 132
           SDA+ K    SE G R+    + M
Sbjct: 121 SDAFEKAAGGSETGPRSSPPTYGM 137

[Close]

BLAST of Cucsa.181910.2 vs. Swiss-Prot
Match: DRMH4_ARATH (Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana GN=At1g54070 PE=3 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 8.7e-10
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MG L +LWD+T+AGPTPD+GLGKLRKH SL++                  V SS  S  S
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLST------------------VRSSPPSLSS 60

Query: 61 VKVSRRIMIVK----PPGGYQYGSPPVSPAASSTPPSSPFS 98
           +V+R IM+ K      G  +    P SP  SS+ P +P +
Sbjct: 61 DQVTRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]

BLAST of Cucsa.181910.2 vs. TrEMBL
Match: A0A0A0LWE4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569400 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 1.1e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV 120
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV 120

Query: 121 GARTPTSPFDM 132
           GARTPTSPFDM
Sbjct: 121 GARTPTSPFDM 131

[Close]

BLAST of Cucsa.181910.2 vs. TrEMBL
Match: B9RFD0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1433630 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.4e-35
Identity = 86/132 (65.15%), Postives = 98/132 (74.24%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP PD+GLGKLRKH +   RS   KES      + G  +   +SE+ 
Sbjct: 1   MGLLDQLWDDTVAGPPPDNGLGKLRKHSTFNFRSTTGKESDG----QNGRSLGDDASEEV 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSG-RESFRFRRRSTSDAYGKTTSE 120
            KV+R IMIVKPPG YQ+GSPPVSPA S TPP SPFSG RESFRFRRRSTSDAY K  SE
Sbjct: 61  TKVTRSIMIVKPPG-YQFGSPPVSPAGS-TPPVSPFSGGRESFRFRRRSTSDAYEK-ASE 120

Query: 121 VGARTPTSPFDM 132
           VG R+P  P+D+
Sbjct: 121 VGPRSPAPPYDV 125

[Close]

BLAST of Cucsa.181910.2 vs. TrEMBL
Match: A0A061F398_THECC (Drm3-like protein isoform 1 OS=Theobroma cacao GN=TCM_026669 PE=4 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 2.1e-34
Identity = 84/132 (63.64%), Postives = 98/132 (74.24%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP PD+GLGKLRKH + T R ++ KES  G     G      +SE+ 
Sbjct: 1   MGLLDQLWDDTVAGPRPDNGLGKLRKHSTFTFRPSSAKESDGGSVRSYG----DETSEEP 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS-GRESFRFRRRSTSDAYGKTTSE 120
            +V+R IMIVKPP GYQ GSPP+SP A STPP SPFS GRESFRFRR+STSDAY K  SE
Sbjct: 61  TRVTRSIMIVKPP-GYQNGSPPISP-AGSTPPVSPFSGGRESFRFRRKSTSDAYEK-ASE 120

Query: 121 VGARTPTSPFDM 132
           VG R+P  P+D+
Sbjct: 121 VGPRSPHPPYDV 125

[Close]

BLAST of Cucsa.181910.2 vs. TrEMBL
Match: A0A067EQR9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-34
Identity = 85/133 (63.91%), Postives = 100/133 (75.19%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP P+SGLGKLRKH S + RS++ KES  G      V     +  D+
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKHSSFSFRSSSGKESDGGNVIRSDV---DETPMDA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS--GRESFRFRRRSTSDAYGKTTS 120
           +KV+R IMIVKPP GYQ GSPPVSP A STPP SPFS  GR+SFRFRRRS SDAY K  +
Sbjct: 61  MKVTRSIMIVKPP-GYQSGSPPVSP-AGSTPPVSPFSAGGRDSFRFRRRSASDAYEK-RN 120

Query: 121 EVGARTPTSPFDM 132
           EVG R+PT+P+D+
Sbjct: 121 EVGLRSPTTPYDV 127

[Close]

BLAST of Cucsa.181910.2 vs. TrEMBL
Match: V4T0R3_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002843mg PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 2.7e-34
Identity = 85/133 (63.91%), Postives = 100/133 (75.19%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP P+SGLGKLRKH S + RS++ KES  G      V     +  D+
Sbjct: 1   MGLLDQLWDDTVAGPRPESGLGKLRKHSSFSFRSSSGKESDGGNVIRSDV---DETPMDA 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS--GRESFRFRRRSTSDAYGKTTS 120
           +KV+R IMIVKPP GYQ GSPPVSP A STPP SPFS  GR+SFRFRRRS SDAY K  +
Sbjct: 61  MKVTRSIMIVKPP-GYQSGSPPVSP-AGSTPPVSPFSAGGRDSFRFRRRSASDAYEK-RN 120

Query: 121 EVGARTPTSPFDM 132
           EVG R+PT+P+D+
Sbjct: 121 EVGLRSPTTPYDV 127

[Close]

BLAST of Cucsa.181910.2 vs. TAIR10
Match: AT1G56220.3 (AT1G56220.3 Dormancy/auxin associated family protein)

HSP 1 Score: 119.4 bits (298), Expect = 1.7e-27
Identity = 73/147 (49.66%), Postives = 91/147 (61.90%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAA---VKESSNGKRYEEGVVMSSSSS 60
           MGLLD LWDDT+AGP P++GLGKLRKH + + R ++     E+ + + Y E      S  
Sbjct: 1   MGLLDHLWDDTVAGPRPENGLGKLRKHHTFSFRPSSGNDQSEAGSARSYGE-----DSLP 60

Query: 61  EDSVKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS-----------GRESFRFRR 120
           E++VKV+R IMI+KPP GYQ  S P SP A STPP SPFS           G+E FRFRR
Sbjct: 61  EEAVKVTRSIMIIKPP-GYQGSSAPASP-AGSTPPLSPFSPPLSPFSANAGGKEPFRFRR 120

Query: 121 RSTSDAYGKTT--SEVGARTPTSPFDM 132
           RSTSDA+ K    SE G R+    + M
Sbjct: 121 RSTSDAFEKAAGGSETGPRSSPPTYGM 140

[Close]

BLAST of Cucsa.181910.2 vs. TAIR10
Match: AT1G54070.1 (AT1G54070.1 Dormancy/auxin associated family protein)

HSP 1 Score: 64.7 bits (156), Expect = 4.9e-11
Identity = 41/101 (40.59%), Postives = 54/101 (53.47%), Query Frame = 1


Query: 1  MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
          MG L +LWD+T+AGPTPD+GLGKLRKH SL++                  V SS  S  S
Sbjct: 1  MGFLHKLWDETVAGPTPDNGLGKLRKHDSLST------------------VRSSPPSLSS 60

Query: 61 VKVSRRIMIVK----PPGGYQYGSPPVSPAASSTPPSSPFS 98
           +V+R IM+ K      G  +    P SP  SS+ P +P +
Sbjct: 61 DQVTRSIMVTKGNNNVRGLRKLKMDPDSPTCSSSNPGTPLT 83

[Close]

BLAST of Cucsa.181910.2 vs. NCBI nr
Match: gi|449435651|ref|XP_004135608.1| (PREDICTED: uncharacterized protein LOC101205077 isoform X1 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 1.6e-67
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV 120
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV 120

Query: 121 GARTPTSPFDM 132
           GARTPTSPFDM
Sbjct: 121 GARTPTSPFDM 131

[Close]

BLAST of Cucsa.181910.2 vs. NCBI nr
Match: gi|659099501|ref|XP_008450631.1| (PREDICTED: uncharacterized protein LOC103492161 [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 9.8e-62
Identity = 124/137 (90.51%), Postives = 128/137 (93.43%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSS--- 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPS TSRSAA KES+NGKRYEEG+++SSSSS   
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSFTSRSAAAKESNNGKRYEEGIMLSSSSSAAA 60

Query: 61  --EDSVKVSRRIMIVKPPGGYQYGS-PPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYG 120
             ED VKVSRRIMIVKPPGGYQYGS PPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYG
Sbjct: 61  AAEDGVKVSRRIMIVKPPGGYQYGSSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYG 120

Query: 121 KTTSEVGARTPTSPFDM 132
           KTTSEVGARTPTSPFDM
Sbjct: 121 KTTSEVGARTPTSPFDM 137

[Close]

BLAST of Cucsa.181910.2 vs. NCBI nr
Match: gi|778662447|ref|XP_011659889.1| (PREDICTED: uncharacterized protein LOC101205077 isoform X2 [Cucumis sativus])

HSP 1 Score: 198.7 bits (504), Expect = 6.2e-48
Identity = 100/105 (95.24%), Postives = 100/105 (95.24%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS
Sbjct: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFR 106
           VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFS  E  R R
Sbjct: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSDFEEDRHR 105

[Close]

BLAST of Cucsa.181910.2 vs. NCBI nr
Match: gi|1000981107|ref|XP_015570609.1| (PREDICTED: uncharacterized protein LOC8287105 isoform X3 [Ricinus communis])

HSP 1 Score: 161.0 bits (406), Expect = 1.4e-36
Identity = 86/131 (65.65%), Postives = 98/131 (74.81%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP PD+GLGKLRKH +   RS   KES      + G  +   +SE+ 
Sbjct: 1   MGLLDQLWDDTVAGPPPDNGLGKLRKHSTFNFRSTTGKESDG----QNGRSLGDDASEEV 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSGRESFRFRRRSTSDAYGKTTSEV 120
            KV+R IMIVKPP GYQ+GSPPVSP A STPP SPFSGRESFRFRRRSTSDAY K  SEV
Sbjct: 61  TKVTRSIMIVKPP-GYQFGSPPVSP-AGSTPPVSPFSGRESFRFRRRSTSDAYEK-ASEV 120

Query: 121 GARTPTSPFDM 132
           G R+P  P+D+
Sbjct: 121 GPRSPAPPYDV 124

[Close]

BLAST of Cucsa.181910.2 vs. NCBI nr
Match: gi|1000981103|ref|XP_015570607.1| (PREDICTED: uncharacterized protein LOC8287105 isoform X1 [Ricinus communis])

HSP 1 Score: 156.4 bits (394), Expect = 3.5e-35
Identity = 86/132 (65.15%), Postives = 98/132 (74.24%), Query Frame = 1


Query: 1   MGLLDQLWDDTLAGPTPDSGLGKLRKHPSLTSRSAAVKESSNGKRYEEGVVMSSSSSEDS 60
           MGLLDQLWDDT+AGP PD+GLGKLRKH +   RS   KES      + G  +   +SE+ 
Sbjct: 1   MGLLDQLWDDTVAGPPPDNGLGKLRKHSTFNFRSTTGKESDG----QNGRSLGDDASEEV 60

Query: 61  VKVSRRIMIVKPPGGYQYGSPPVSPAASSTPPSSPFSG-RESFRFRRRSTSDAYGKTTSE 120
            KV+R IMIVKPPG YQ+GSPPVSPA S TPP SPFSG RESFRFRRRSTSDAY K  SE
Sbjct: 61  TKVTRSIMIVKPPG-YQFGSPPVSPAGS-TPPVSPFSGGRESFRFRRRSTSDAYEK-ASE 120

Query: 121 VGARTPTSPFDM 132
           VG R+P  P+D+
Sbjct: 121 VGPRSPAPPYDV 125

The following BLAST results are available for this feature:

BLAST of Cucsa.181910.2 vs. Swiss-Prot


Match Name	E-value	Identity	Description
DRMH3_ARATH	1.3e-26	50.69	Dormancy-associated protein homolog 3 OS=Arabidopsis thaliana GN=At1g56220 PE=1 ...	[more]
DRMH4_ARATH	8.7e-10	40.59	Dormancy-associated protein homolog 4 OS=Arabidopsis thaliana GN=At1g54070 PE=3 ...	[more]

BLAST of Cucsa.181910.2 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LWE4_CUCSA	1.1e-67	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G569400 PE=4 SV=1	[more]
B9RFD0_RICCO	2.4e-35	65.15	Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1433630 PE=4 SV=1	[more]
A0A061F398_THECC	2.1e-34	63.64	Drm3-like protein isoform 1 OS=Theobroma cacao GN=TCM_026669 PE=4 SV=1	[more]
A0A067EQR9_CITSI	2.7e-34	63.91	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g033116mg PE=4 SV=1	[more]
V4T0R3_9ROSI	2.7e-34	63.91	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10002843mg PE=4 SV=1	[more]

BLAST of Cucsa.181910.2 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G56220.3	1.7e-27	49.66	Dormancy/auxin associated family protein	[more]
AT1G54070.1	4.9e-11	40.59	Dormancy/auxin associated family protein	[more]

BLAST of Cucsa.181910.2 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449435651\|ref\|XP_004135608.1\|	1.6e-67	100.00	PREDICTED: uncharacterized protein LOC101205077 isoform X1 [Cucumis sativus]	[more]
gi\|659099501\|ref\|XP_008450631.1\|	9.8e-62	90.51	PREDICTED: uncharacterized protein LOC103492161 [Cucumis melo]	[more]
gi\|778662447\|ref\|XP_011659889.1\|	6.2e-48	95.24	PREDICTED: uncharacterized protein LOC101205077 isoform X2 [Cucumis sativus]	[more]
gi\|1000981107\|ref\|XP_015570609.1\|	1.4e-36	65.65	PREDICTED: uncharacterized protein LOC8287105 isoform X3 [Ricinus communis]	[more]
gi\|1000981103\|ref\|XP_015570607.1\|	3.5e-35	65.15	PREDICTED: uncharacterized protein LOC8287105 isoform X1 [Ricinus communis]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR008406	DRM/ARP

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.181910	Cucsa.181910	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.181910.2	Cucsa.181910.2-protein	polypeptide

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.181910.2.five_prime_UTR.1	Cucsa.181910.2.five_prime_UTR.1	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.181910.2.CDS.1	Cucsa.181910.2.CDS.1	CDS
Cucsa.181910.2.CDS.2	Cucsa.181910.2.CDS.2	CDS
Cucsa.181910.2.CDS.3	Cucsa.181910.2.CDS.3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.181910.2.three_prime_UTR.1	Cucsa.181910.2.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008406	Dormancy/auxin associated protein	PFAM	PF05564	Auxin_repressed	coord: 7..85 score: 3.
None	No IPR available	PANTHER	PTHR33565	FAMILY NOT NAMED	coord: 2..128 score: 3.4
None	No IPR available	PANTHER	PTHR33565:SF1	DORMANCY/AUXIN ASSOCIATED PROTEIN	coord: 2..128 score: 3.4