Cucsa.165150 (gene) Cucumber (Gy14) v1

NameCucsa.165150
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v1)
DescriptionLOB domain-containing protein, putative
Locationscaffold01153 : 492987 .. 493978 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAGGCCTTAACTCTTCTAATTCTTCTACTTCTTGTGGTGCTTGCAAGTTTCTTAGAAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGATGAAGCTACTTCTCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCTAAACTTCTCTTACACCTCCCCACCCATATCCGAAGCCATGCTGCCATTACCGTTGCCTACGAAGCTCTTGAACGCATGCGTGATCCTACTTATGGTTGTGTTGCGCATATCTTTGCATTGCAACAAGAGGTTGTTTTAAAACCCTAAATAACTTAAGCTGATGGGTTATAGTAAACTTACGTGACAGTAACATTTTTATTCATATAGGACCACTTCAAAACTCTAAAAATTTAAATAGATGGTTACATTTTATTCATATATATTCTTTAACACTTTTATAATTACTTGACCAATATACTGTATTCTAACTTGTCATCATTTAACTCATAAGCTTAAGTTATACTCTTTCTTAATTCTATCATCCTCTTGTAGGTTGCTAGCTTGCAGGAGGAGATAGAAATTCTGGGGAGCCAAATTGCGAATTTTGCCACAACCGGTGGGAGCATTGCAGCGGTCGATAATCCATTTATAGATCAGGTTCAAGTGCCACAGCAGATGGATGGTTTCGGGATGATGAACACAAATTATTATCAAAATGAGCTAGTTTCTGAGTTGCCCTACCAAAGTTTTGATAATGTCCAAAACGATAATACTACTGCTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGAGTTTTCCAACTCAAATAATGTTGTTGAGAGTTCAGCCTTTGATGTTTCAGTTGAGGAGAATTGTATTGGTTACCCATGGATAGTTGGATGATGATGGACAAATTTTTTTGAAGTTTTATAGTTGGCCTTTGGCTTTAAATGGATGAATAATATTAGTCTCTTTGTGTTAGAAAATAA

mRNA sequence

ATGACAGGCCTTAACTCTTCTAATTCTTCTACTTCTTGTGGTGCTTGCAAGTTTCTTAGAAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGATGAAGCTACTTCTCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCTAAACTTCTCTTACACCTCCCCACCCATATCCGAAGCCATGCTGCCATTACCGTTGCCTACGAAGCTCTTGAACGCATGCGTGATCCTACTTATGGTTGTGTTGCGCATATCTTTGCATTGCAACAAGAGGTTGCTAGCTTGCAGGAGGAGATAGAAATTCTGGGGAGCCAAATTGCGAATTTTGCCACAACCGGTGGGAGCATTGCAGCGGTCGATAATCCATTTATAGATCAGGTTCAAGTGCCACAGCAGATGGATGGTTTCGGGATGATGAACACAAATTATTATCAAAATGAGCTAGTTTCTGAGTTGCCCTACCAAAGTTTTGATAATGTCCAAAACGATAATACTACTGCTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGAGTTTTCCAACTCAAATAATGTTGTTGAGAGTTCAGCCTTTGATGTTTCAGTTGAGGAGAATTGTATTGGTTACCCATGGATAGTTGGATGATGATGGACAAATTTTTTTGAAGTTTTATAGTTGGCCTTTGGCTTTAAATGGATGAATAATATTAGTCTCTTTGTGTTAGAAAATAA

Coding sequence (CDS)

ATGACAGGCCTTAACTCTTCTAATTCTTCTACTTCTTGTGGTGCTTGCAAGTTTCTTAGAAGAAAATGTAGTGATCAATGTGTTTTTGCTCCTTTCTTTAGCTATGATGAAGCTACTTCTCATTTTGCAGCTGTTCATAAAGTGTTTGGTGCTAGTAATGTCTCTAAACTTCTCTTACACCTCCCCACCCATATCCGAAGCCATGCTGCCATTACCGTTGCCTACGAAGCTCTTGAACGCATGCGTGATCCTACTTATGGTTGTGTTGCGCATATCTTTGCATTGCAACAAGAGGTTGCTAGCTTGCAGGAGGAGATAGAAATTCTGGGGAGCCAAATTGCGAATTTTGCCACAACCGGTGGGAGCATTGCAGCGGTCGATAATCCATTTATAGATCAGGTTCAAGTGCCACAGCAGATGGATGGTTTCGGGATGATGAACACAAATTATTATCAAAATGAGCTAGTTTCTGAGTTGCCCTACCAAAGTTTTGATAATGTCCAAAACGATAATACTACTGCTCAAATGATATCTCCATTGTTTTGTTTAGGGGAAGAAGATGGGGTTTTTGAGTTTTCCAACTCAAATAATGTTGTTGAGAGTTCAGCCTTTGATGTTTCAGTTGAGGAGAATTGTATTGGTTACCCATGGATAGTTGGATGA

Protein sequence

MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPLFCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG*
BLAST of Cucsa.165150 vs. Swiss-Prot
Match: LBD33_ARATH (LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 5.3e-44
Identity = 86/151 (56.95%), Postives = 115/151 (76.16%), Query Frame = 1

Query: 7   SNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHIR 66
           ++  +SCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP H R
Sbjct: 2   ASHGSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQR 61

Query: 67  SHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAAV 126
           + AAIT++YEAL RMRDP YGCVAHIFAL Q+V +LQEEIE LGSQ+ NF+ +  + + +
Sbjct: 62  NIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQL 121

Query: 127 DNPFIDQVQVPQQMDGFGMMNTNYYQNELVS 158
           +N       +P+ ++   M  TN+    +++
Sbjct: 122 NN-------IPEFVNQMTMATTNFVDESVLN 145

BLAST of Cucsa.165150 vs. Swiss-Prot
Match: LBD29_ARATH (LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.7e-37
Identity = 86/174 (49.43%), Postives = 112/174 (64.37%), Query Frame = 1

Query: 5   NSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTH 64
           +SS+S + CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLP  
Sbjct: 4   SSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPIS 63

Query: 65  IRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIA 124
            R  AAIT++YEA  R++DP YGCV+HIFALQQ+V +LQ E+EIL  Q A       S  
Sbjct: 64  DRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPT 123

Query: 125 AVDNP---FIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQ--SFDNVQNDNTT 174
           + +NP   + D  + P   D     + N Y +   + L YQ  S   VQ+ + T
Sbjct: 124 S-ENPNSYYGDTTKAPYHHD-----HQNIYHHHDQTHLVYQTGSSGTVQHGDAT 171

BLAST of Cucsa.165150 vs. Swiss-Prot
Match: LBD18_ARATH (LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.0e-34
Identity = 67/113 (59.29%), Postives = 85/113 (75.22%), Query Frame = 1

Query: 3   GLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLP 62
           G +       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+P
Sbjct: 28  GSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIP 87

Query: 63  THIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIAN 116
            H RS A +T+ YEA  R+RDP YGCVAHIFALQQ+V +LQ E+  L + +A+
Sbjct: 88  VHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

BLAST of Cucsa.165150 vs. Swiss-Prot
Match: LBD16_ARATH (LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.7e-34
Identity = 82/198 (41.41%), Postives = 115/198 (58.08%), Query Frame = 1

Query: 6   SSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHI 65
           ++ + + CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL++P H 
Sbjct: 9   TAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHD 68

Query: 66  RSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAA 125
           R  A +T+AYEA  R+ DP YGCV+HIFALQQ+VA LQ ++  + +QIA   T+      
Sbjct: 69  RCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLR 128

Query: 126 VDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPLFCLGE 185
             +   +Q    QQ     + +   Y        PY    N  N       +SP   L E
Sbjct: 129 HSSESTNQFMTWQQTSVSPIGSA--YSTPYNHHQPYYGHVNPNNP------VSPQSSLEE 188

Query: 186 EDGVFEFSNSNNVVESSA 204
                 FSN+++ V ++A
Sbjct: 189 -----SFSNTSSDVTTTA 193

BLAST of Cucsa.165150 vs. Swiss-Prot
Match: LBD17_ARATH (LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 8.5e-34
Identity = 73/147 (49.66%), Postives = 95/147 (64.63%), Query Frame = 1

Query: 7   SNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHIR 66
           + S + CGACKFLRR+C   CVFAP+F +++  SHFAA+H+VFGASN SKLL HLP   R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 67  SHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAAV 126
             AA T+ YEA  R +DP YGCV+HIF+LQQ+V +LQ ++EIL  Q         S+ A+
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQ------SMMAI 121

Query: 127 DNPFIDQVQVPQQMDGFGMMNTNYYQN 154
           D+P I+              N NYYQ+
Sbjct: 122 DSPSIE--------------NPNYYQD 128

BLAST of Cucsa.165150 vs. TrEMBL
Match: A0A0A0KNX8_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G182740 PE=4 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 6.8e-123
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG
Sbjct: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120

Query: 121 GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL 180
           GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL
Sbjct: 121 GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL 180

Query: 181 FCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 221
           FCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG
Sbjct: 181 FCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 220

BLAST of Cucsa.165150 vs. TrEMBL
Match: W9R256_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_025355 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.6e-47
Identity = 119/240 (49.58%), Postives = 141/240 (58.75%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTG  S     SCGACKFLRRKCS +C+FAP+F YDEA SHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGFGS-----SCGACKFLRRKCSSECIFAPYFCYDEAPSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LP H RS AA T++YEAL RMRDP YGCVAHIF LQQ++A LQEEIEILG+QIAN  T G
Sbjct: 61  LPVHNRSDAATTISYEALARMRDPIYGCVAHIFTLQQQIACLQEEIEILGNQIANNLTAG 120

Query: 121 ----GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNE---LVSELPYQSFDNVQNDNTT 180
               GS  A +N     V   Q       MN+ YYQN+   L+S++   + +N       
Sbjct: 121 IASCGSSEATNNNNSSNVNETQIFPQNDAMNSQYYQNQQEILLSQIGNSTENNNNQSGFD 180

Query: 181 AQMIS----PLFCLGEED-----------GVFEFSNSNNVVESSAF-DVSVEENCIGYPW 218
              +     P +  GEE+            +FE +       S    D+    NCIG  W
Sbjct: 181 GHNMGVHFPPFYGWGEENVPCHTFSDPLRKLFEGTEQEKFGNSPWLDDIPNMGNCIGPIW 235

BLAST of Cucsa.165150 vs. TrEMBL
Match: B9HT79_POPTR (LOB domain protein 33 OS=Populus trichocarpa GN=POPTR_0010s20800g PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 4.7e-47
Identity = 113/192 (58.85%), Postives = 131/192 (68.23%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGL S     SCGACKFLRRKC+ +CVFAP+F YD+A +HFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLGS-----SCGACKFLRRKCTSECVFAPYFCYDQAAAHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LP H R  AAIT++YEAL RMRDP YGCVAHIFALQQ+VASLQEEIEIL +Q+A+  T G
Sbjct: 61  LPVHNRGDAAITISYEALARMRDPIYGCVAHIFALQQQVASLQEEIEILENQMASL-TVG 120

Query: 121 ----GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQM 180
               GS   + NP  + +   QQ      MNT YYQN   ++L +  +    N     QM
Sbjct: 121 VAGFGSSPTISNPNCEMLFSFQQ----DAMNTQYYQNPQSAQLNHSGY-TTGNQTFDGQM 180

Query: 181 ISPLFCL-GEED 188
             PL  L G ED
Sbjct: 181 NVPLTPLYGWED 181

BLAST of Cucsa.165150 vs. TrEMBL
Match: A0A0D2UYI0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G267700 PE=4 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.1e-46
Identity = 116/215 (53.95%), Postives = 136/215 (63.26%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGL       SCGACKFLRRKC+++CVFAP+F YDEA +HFAAVHKVFGASN SKLLLH
Sbjct: 1   MTGLGC-----SCGACKFLRRKCTNECVFAPYFCYDEAANHFAAVHKVFGASNASKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LP H RS AAIT+AYEAL R+RDP YGCVAHIFALQQ+VA LQEEIE L +Q+AN A   
Sbjct: 61  LPIHNRSDAAITIAYEALARIRDPIYGCVAHIFALQQQVAGLQEEIETLINQMANHA--- 120

Query: 121 GSIAAVDNPFIDQVQVPQQMDGFG----MMNTNYYQNELVSELPYQSFDNVQNDNTTAQM 180
                        V+VP +   FG     MNT YYQ+E  + L      N+Q   T  Q+
Sbjct: 121 -------------VEVPIEAVQFGSIDETMNTLYYQDEQATLL------NLQGSITGNQV 180

Query: 181 ISPLFCLGEEDGVFEFSNSNNVVESSAFDVSVEEN 212
           +    C  EED      +S   VE S F  ++ EN
Sbjct: 181 VHSQLC--EEDSA---QHSFKWVEDSKFLSNIHEN 183

BLAST of Cucsa.165150 vs. TrEMBL
Match: D7TLQ3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g02060 PE=4 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 9.7e-45
Identity = 113/223 (50.67%), Postives = 137/223 (61.43%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTG+ +     SCGACKFLRR+C+  CVFAP F YD+A SHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGIGA-----SCGACKFLRRRCTSDCVFAPHFCYDQAASHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFA--T 120
           LP H R  AAIT++YEAL RMRDP YGCVAHIFALQQ+VA+LQEEIEILG+ +A FA  T
Sbjct: 61  LPLHNRGEAAITISYEALARMRDPVYGCVAHIFALQQQVANLQEEIEILGNHMATFAPDT 120

Query: 121 TGGSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSE----LPYQSFDNVQNDNTTA 180
             G      N     +Q   Q D   M +    Q  L+S        Q+FD++ N+    
Sbjct: 121 VTGEHYGATNNLNTGLQFSSQTDTLNMQDYLNQQALLLSHAGNATANQAFDSLMNEQP-- 180

Query: 181 QMISPLFCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPW 218
               PL+  G E+  F F +S+       F+   +E    YPW
Sbjct: 181 ---PPLY--GWENQNF-FCDSDATPLERLFEGIDQEFSAYYPW 210

BLAST of Cucsa.165150 vs. TAIR10
Match: AT5G06080.1 (AT5G06080.1 LOB domain-containing protein 33)

HSP 1 Score: 179.1 bits (453), Expect = 3.0e-45
Identity = 86/151 (56.95%), Postives = 115/151 (76.16%), Query Frame = 1

Query: 7   SNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHIR 66
           ++  +SCGACKFLRRKC+  CVF+P+FSY++A+SHFAAVHKVFGASNVSK LLHLP H R
Sbjct: 2   ASHGSSCGACKFLRRKCNRDCVFSPYFSYEQASSHFAAVHKVFGASNVSKHLLHLPQHQR 61

Query: 67  SHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAAV 126
           + AAIT++YEAL RMRDP YGCVAHIFAL Q+V +LQEEIE LGSQ+ NF+ +  + + +
Sbjct: 62  NIAAITISYEALSRMRDPVYGCVAHIFALHQQVVTLQEEIEFLGSQMKNFSYSNQNGSQL 121

Query: 127 DNPFIDQVQVPQQMDGFGMMNTNYYQNELVS 158
           +N       +P+ ++   M  TN+    +++
Sbjct: 122 NN-------IPEFVNQMTMATTNFVDESVLN 145

BLAST of Cucsa.165150 vs. TAIR10
Match: AT3G58190.1 (AT3G58190.1 lateral organ boundaries-domain 29)

HSP 1 Score: 156.4 bits (394), Expect = 2.1e-38
Identity = 86/174 (49.43%), Postives = 112/174 (64.37%), Query Frame = 1

Query: 5   NSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTH 64
           +SS+S + CGACKFLRRKC+  CVFAP+F +++  SHFAA+HKVFGASN SKLL HLP  
Sbjct: 4   SSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHLPIS 63

Query: 65  IRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIA 124
            R  AAIT++YEA  R++DP YGCV+HIFALQQ+V +LQ E+EIL  Q A       S  
Sbjct: 64  DRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFADSPT 123

Query: 125 AVDNP---FIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQ--SFDNVQNDNTT 174
           + +NP   + D  + P   D     + N Y +   + L YQ  S   VQ+ + T
Sbjct: 124 S-ENPNSYYGDTTKAPYHHD-----HQNIYHHHDQTHLVYQTGSSGTVQHGDAT 171

BLAST of Cucsa.165150 vs. TAIR10
Match: AT2G45420.1 (AT2G45420.1 LOB domain-containing protein 18)

HSP 1 Score: 148.3 bits (373), Expect = 5.6e-36
Identity = 67/113 (59.29%), Postives = 85/113 (75.22%), Query Frame = 1

Query: 3   GLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLP 62
           G +       CGACKFLRRKC   C+FAP+F  ++ +++FAAVHKVFGASNVSKLLLH+P
Sbjct: 28  GSSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIP 87

Query: 63  THIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIAN 116
            H RS A +T+ YEA  R+RDP YGCVAHIFALQQ+V +LQ E+  L + +A+
Sbjct: 88  VHRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLAS 140

BLAST of Cucsa.165150 vs. TAIR10
Match: AT2G42430.1 (AT2G42430.1 lateral organ boundaries-domain 16)

HSP 1 Score: 147.5 bits (371), Expect = 9.6e-36
Identity = 82/198 (41.41%), Postives = 115/198 (58.08%), Query Frame = 1

Query: 6   SSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHI 65
           ++ + + CGACKFLRRKC+  C+FAP+FS ++  + FAA+HKVFGASNVSKLLL++P H 
Sbjct: 9   TAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKLLLNVPIHD 68

Query: 66  RSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAA 125
           R  A +T+AYEA  R+ DP YGCV+HIFALQQ+VA LQ ++  + +QIA   T+      
Sbjct: 69  RCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIAGHQTSAAGDLR 128

Query: 126 VDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPLFCLGE 185
             +   +Q    QQ     + +   Y        PY    N  N       +SP   L E
Sbjct: 129 HSSESTNQFMTWQQTSVSPIGSA--YSTPYNHHQPYYGHVNPNNP------VSPQSSLEE 188

Query: 186 EDGVFEFSNSNNVVESSA 204
                 FSN+++ V ++A
Sbjct: 189 -----SFSNTSSDVTTTA 193

BLAST of Cucsa.165150 vs. TAIR10
Match: AT2G42440.1 (AT2G42440.1 Lateral organ boundaries (LOB) domain family protein)

HSP 1 Score: 145.2 bits (365), Expect = 4.8e-35
Identity = 73/147 (49.66%), Postives = 95/147 (64.63%), Query Frame = 1

Query: 7   SNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLHLPTHIR 66
           + S + CGACKFLRR+C   CVFAP+F +++  SHFAA+H+VFGASN SKLL HLP   R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 67  SHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTGGSIAAV 126
             AA T+ YEA  R +DP YGCV+HIF+LQQ+V +LQ ++EIL  Q         S+ A+
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQ------SMMAI 121

Query: 127 DNPFIDQVQVPQQMDGFGMMNTNYYQN 154
           D+P I+              N NYYQ+
Sbjct: 122 DSPSIE--------------NPNYYQD 128

BLAST of Cucsa.165150 vs. NCBI nr
Match: gi|449459956|ref|XP_004147712.1| (PREDICTED: LOB domain-containing protein 33 [Cucumis sativus])

HSP 1 Score: 448.0 bits (1151), Expect = 9.8e-123
Identity = 220/220 (100.00%), Postives = 220/220 (100.00%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG
Sbjct: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120

Query: 121 GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL 180
           GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL
Sbjct: 121 GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISPL 180

Query: 181 FCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 221
           FCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG
Sbjct: 181 FCLGEEDGVFEFSNSNNVVESSAFDVSVEENCIGYPWIVG 220

BLAST of Cucsa.165150 vs. NCBI nr
Match: gi|659123494|ref|XP_008461694.1| (PREDICTED: LOB domain-containing protein 33-like [Cucumis melo])

HSP 1 Score: 406.8 bits (1044), Expect = 2.5e-110
Identity = 204/222 (91.89%), Postives = 210/222 (94.59%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGLNSS +S+SCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLNSSTTSSSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LPTH RSHAAITVAYEALERMRDPTYGC+AHIFALQQEV SLQEEIEILGSQIAN ATTG
Sbjct: 61  LPTHTRSHAAITVAYEALERMRDPTYGCIAHIFALQQEVVSLQEEIEILGSQIANLATTG 120

Query: 121 GSIAAVDNPFIDQ-VQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQMISP 180
           GSIAAV+NPFIDQ VQV QQMDGF M NTNYYQNEL SELPYQSFDN+QNDN TAQMISP
Sbjct: 121 GSIAAVENPFIDQVVQVSQQMDGFEMTNTNYYQNELASELPYQSFDNIQNDN-TAQMISP 180

Query: 181 LFCLGEEDGVFEFSNSNNVVES-SAFDVSVEENCIGYPWIVG 221
           LFCLGEEDGVFEF NSNNVVES SAFDVSVEENC+GYPWIVG
Sbjct: 181 LFCLGEEDGVFEFCNSNNVVESTSAFDVSVEENCVGYPWIVG 221

BLAST of Cucsa.165150 vs. NCBI nr
Match: gi|703099279|ref|XP_010096608.1| (hypothetical protein L484_025355 [Morus notabilis])

HSP 1 Score: 197.6 bits (501), Expect = 2.3e-47
Identity = 119/240 (49.58%), Postives = 141/240 (58.75%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTG  S     SCGACKFLRRKCS +C+FAP+F YDEA SHFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGFGS-----SCGACKFLRRKCSSECIFAPYFCYDEAPSHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LP H RS AA T++YEAL RMRDP YGCVAHIF LQQ++A LQEEIEILG+QIAN  T G
Sbjct: 61  LPVHNRSDAATTISYEALARMRDPIYGCVAHIFTLQQQIACLQEEIEILGNQIANNLTAG 120

Query: 121 ----GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNE---LVSELPYQSFDNVQNDNTT 180
               GS  A +N     V   Q       MN+ YYQN+   L+S++   + +N       
Sbjct: 121 IASCGSSEATNNNNSSNVNETQIFPQNDAMNSQYYQNQQEILLSQIGNSTENNNNQSGFD 180

Query: 181 AQMIS----PLFCLGEED-----------GVFEFSNSNNVVESSAF-DVSVEENCIGYPW 218
              +     P +  GEE+            +FE +       S    D+    NCIG  W
Sbjct: 181 GHNMGVHFPPFYGWGEENVPCHTFSDPLRKLFEGTEQEKFGNSPWLDDIPNMGNCIGPIW 235

BLAST of Cucsa.165150 vs. NCBI nr
Match: gi|224112721|ref|XP_002316271.1| (LOB domain protein 33 [Populus trichocarpa])

HSP 1 Score: 196.1 bits (497), Expect = 6.7e-47
Identity = 113/192 (58.85%), Postives = 131/192 (68.23%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGL S     SCGACKFLRRKC+ +CVFAP+F YD+A +HFAAVHKVFGASNVSKLLLH
Sbjct: 1   MTGLGS-----SCGACKFLRRKCTSECVFAPYFCYDQAAAHFAAVHKVFGASNVSKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LP H R  AAIT++YEAL RMRDP YGCVAHIFALQQ+VASLQEEIEIL +Q+A+  T G
Sbjct: 61  LPVHNRGDAAITISYEALARMRDPIYGCVAHIFALQQQVASLQEEIEILENQMASL-TVG 120

Query: 121 ----GSIAAVDNPFIDQVQVPQQMDGFGMMNTNYYQNELVSELPYQSFDNVQNDNTTAQM 180
               GS   + NP  + +   QQ      MNT YYQN   ++L +  +    N     QM
Sbjct: 121 VAGFGSSPTISNPNCEMLFSFQQ----DAMNTQYYQNPQSAQLNHSGY-TTGNQTFDGQM 180

Query: 181 ISPLFCL-GEED 188
             PL  L G ED
Sbjct: 181 NVPLTPLYGWED 181

BLAST of Cucsa.165150 vs. NCBI nr
Match: gi|823242334|ref|XP_012453851.1| (PREDICTED: LOB domain-containing protein 33 [Gossypium raimondii])

HSP 1 Score: 192.6 bits (488), Expect = 7.4e-46
Identity = 116/215 (53.95%), Postives = 136/215 (63.26%), Query Frame = 1

Query: 1   MTGLNSSNSSTSCGACKFLRRKCSDQCVFAPFFSYDEATSHFAAVHKVFGASNVSKLLLH 60
           MTGL       SCGACKFLRRKC+++CVFAP+F YDEA +HFAAVHKVFGASN SKLLLH
Sbjct: 1   MTGLGC-----SCGACKFLRRKCTNECVFAPYFCYDEAANHFAAVHKVFGASNASKLLLH 60

Query: 61  LPTHIRSHAAITVAYEALERMRDPTYGCVAHIFALQQEVASLQEEIEILGSQIANFATTG 120
           LP H RS AAIT+AYEAL R+RDP YGCVAHIFALQQ+VA LQEEIE L +Q+AN A   
Sbjct: 61  LPIHNRSDAAITIAYEALARIRDPIYGCVAHIFALQQQVAGLQEEIETLINQMANHA--- 120

Query: 121 GSIAAVDNPFIDQVQVPQQMDGFG----MMNTNYYQNELVSELPYQSFDNVQNDNTTAQM 180
                        V+VP +   FG     MNT YYQ+E  + L      N+Q   T  Q+
Sbjct: 121 -------------VEVPIEAVQFGSIDETMNTLYYQDEQATLL------NLQGSITGNQV 180

Query: 181 ISPLFCLGEEDGVFEFSNSNNVVESSAFDVSVEEN 212
           +    C  EED      +S   VE S F  ++ EN
Sbjct: 181 VHSQLC--EEDSA---QHSFKWVEDSKFLSNIHEN 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
LBD33_ARATH5.3e-4456.95LOB domain-containing protein 33 OS=Arabidopsis thaliana GN=LBD33 PE=2 SV=1[more]
LBD29_ARATH3.7e-3749.43LOB domain-containing protein 29 OS=Arabidopsis thaliana GN=LBD29 PE=2 SV=1[more]
LBD18_ARATH1.0e-3459.29LOB domain-containing protein 18 OS=Arabidopsis thaliana GN=LBD18 PE=1 SV=2[more]
LBD16_ARATH1.7e-3441.41LOB domain-containing protein 16 OS=Arabidopsis thaliana GN=LBD16 PE=1 SV=1[more]
LBD17_ARATH8.5e-3449.66LOB domain-containing protein 17 OS=Arabidopsis thaliana GN=LBD17 PE=2 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KNX8_CUCSA6.8e-123100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G182740 PE=4 SV=1[more]
W9R256_9ROSA1.6e-4749.58Uncharacterized protein OS=Morus notabilis GN=L484_025355 PE=4 SV=1[more]
B9HT79_POPTR4.7e-4758.85LOB domain protein 33 OS=Populus trichocarpa GN=POPTR_0010s20800g PE=4 SV=1[more]
A0A0D2UYI0_GOSRA5.1e-4653.95Uncharacterized protein OS=Gossypium raimondii GN=B456_011G267700 PE=4 SV=1[more]
D7TLQ3_VITVI9.7e-4550.67Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0019g02060 PE=4 SV=... [more]
Match NameE-valueIdentityDescription
AT5G06080.13.0e-4556.95 LOB domain-containing protein 33[more]
AT3G58190.12.1e-3849.43 lateral organ boundaries-domain 29[more]
AT2G45420.15.6e-3659.29 LOB domain-containing protein 18[more]
AT2G42430.19.6e-3641.41 lateral organ boundaries-domain 16[more]
AT2G42440.14.8e-3549.66 Lateral organ boundaries (LOB) domain family protein[more]
Match NameE-valueIdentityDescription
gi|449459956|ref|XP_004147712.1|9.8e-123100.00PREDICTED: LOB domain-containing protein 33 [Cucumis sativus][more]
gi|659123494|ref|XP_008461694.1|2.5e-11091.89PREDICTED: LOB domain-containing protein 33-like [Cucumis melo][more]
gi|703099279|ref|XP_010096608.1|2.3e-4749.58hypothetical protein L484_025355 [Morus notabilis][more]
gi|224112721|ref|XP_002316271.1|6.7e-4758.85LOB domain protein 33 [Populus trichocarpa][more]
gi|823242334|ref|XP_012453851.1|7.4e-4653.95PREDICTED: LOB domain-containing protein 33 [Gossypium raimondii][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004883LOB
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cucsa.165150.1Cucsa.165150.1mRNA


Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004883Lateral organ boundaries, LOBPFAMPF03195DUF260coord: 12..109
score: 3.4
IPR004883Lateral organ boundaries, LOBPROFILEPS50891LOBcoord: 11..113
score: 21
NoneNo IPR availableunknownCoilCoilcoord: 92..112
scor
NoneNo IPR availablePANTHERPTHR31529FAMILY NOT NAMEDcoord: 1..177
score: 2.1
NoneNo IPR availablePANTHERPTHR31529:SF6LOB DOMAIN-CONTAINING PROTEIN 33coord: 1..177
score: 2.1

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Cucsa.165150Cucumber (Chinese Long) v3cgycucB261
Cucsa.165150Cucumber (Chinese Long) v3cgycucB262
Cucsa.165150Cucumber (Chinese Long) v3cgycucB263
Cucsa.165150Watermelon (97103) v2cgywmbB289
Cucsa.165150Watermelon (97103) v2cgywmbB292
Cucsa.165150Watermelon (97103) v2cgywmbB294
Cucsa.165150Wax gourdcgywgoB330
Cucsa.165150Wax gourdcgywgoB337
Cucsa.165150Cucumber (Gy14) v1cgycgyB015
Cucsa.165150Cucumber (Gy14) v1cgycgyB069
Cucsa.165150Cucumber (Gy14) v1cgycgyB084
Cucsa.165150Cucumber (Gy14) v1cgycgyB105
Cucsa.165150Cucurbita maxima (Rimu)cgycmaB0467
Cucsa.165150Cucurbita maxima (Rimu)cgycmaB0470
Cucsa.165150Cucurbita moschata (Rifu)cgycmoB0468
Cucsa.165150Cucurbita moschata (Rifu)cgycmoB0469
Cucsa.165150Cucurbita moschata (Rifu)cgycmoB0473
Cucsa.165150Wild cucumber (PI 183967)cgycpiB254
Cucsa.165150Wild cucumber (PI 183967)cgycpiB255
Cucsa.165150Wild cucumber (PI 183967)cgycpiB257
Cucsa.165150Wild cucumber (PI 183967)cgycpiB259
Cucsa.165150Wild cucumber (PI 183967)cgycpiB261
Cucsa.165150Cucumber (Chinese Long) v2cgycuB247
Cucsa.165150Cucumber (Chinese Long) v2cgycuB248
Cucsa.165150Cucumber (Chinese Long) v2cgycuB250
Cucsa.165150Cucumber (Chinese Long) v2cgycuB254
Cucsa.165150Melon (DHL92) v3.5.1cgymeB292
Cucsa.165150Melon (DHL92) v3.5.1cgymeB293
Cucsa.165150Melon (DHL92) v3.5.1cgymeB294
Cucsa.165150Melon (DHL92) v3.5.1cgymeB295
Cucsa.165150Watermelon (Charleston Gray)cgywcgB288
Cucsa.165150Watermelon (Charleston Gray)cgywcgB292
Cucsa.165150Watermelon (Charleston Gray)cgywcgB293
Cucsa.165150Watermelon (97103) v1cgywmB302
Cucsa.165150Watermelon (97103) v1cgywmB303
Cucsa.165150Watermelon (97103) v1cgywmB305
Cucsa.165150Watermelon (97103) v1cgywmB309
Cucsa.165150Watermelon (97103) v1cgywmB312
Cucsa.165150Bottle gourd (USVL1VR-Ls)cgylsiB275
Cucsa.165150Melon (DHL92) v3.6.1cgymedB287
Cucsa.165150Melon (DHL92) v3.6.1cgymedB286
Cucsa.165150Melon (DHL92) v3.6.1cgymedB288