Cucsa.143870 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.143870
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Two-component response regulator
Location	scaffold01080 : 247170 .. 248504 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACTTCATCTTCTTCTTCGTCTTCTTCTTCTTCATGTATGAAATGGAGCTGTGAAAATGGGTATCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTGCTAAAAAACTCCTCTTGTAAAGGTAATACTACTACTTGATTACTTCTTAACTTTCTATTTTTTTGGATTTATTAACATTGGTAGTTATTATATAATAAATATATGCAGTAACGACGGCAGAAAATGGTGTGAGTGCTTTGGAGTTCTTAGGATTGTTGGATGAACATAATCAACACACCAACTTTGAACGCTCCAATGTAAGTACTGAATTCAATTAATTATTTGTAAATTTTTTTTTATTAATATTAATAATTAAAATGATTGGGACTTAGGAGTGGCAGCAGAGGTCAAAAGTGAATATGATCATCACTGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGGTCGTCTTCTTCTTCTTCTTCTTCTTTTTCTCAAGAAAATTTGTTCGTTTGTAGAATAAAAAAAGAAAAAAAGTGATATAATTAATATATTGAATGCAGAGATCTTCGAAGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCAGAAAACGTGCCCACTCGCATCAACAAGTTTGTCTTTTCCCTTTCTTTTCCTTTTTTCACTCACTTTTTTCACTTTTACCATTTCTCTTTTTATTATTTCATCTTACAAACAAAGAGTATTTTTAAGATAACAATCTCTTTTAAAGCACCAACACATTTATGAGTTAAGAGTCATATATTGCAAATTAAATATATAGTTAAAGTTTGTTAAACCATTTTGCAAAACAAAACAACCACATTCACTATCTTTAGATTATCTAAAGAAATTAAAAATATGTTTTCCTTTTCTAAATTATATTTTTAAAACTATTTTTGAGTGGTTGTCAACCCTATAAATTTGTTTGAAAATGAACCTTTAAACGAAATTGAACACTTCAAGATATACTGTTAATAGAGGGAGTAGAATGTATTATTTAGTGCTTTTAAATTTATGAGCTAAATAAATTGATGCCACCTTAAAGTTTATAAACACCATTTAAAAGAATTCACATCTTAAAAATAAAACCAAATTTGTAATATGGAAATGATCCTTCTTCTTAATTTTATTGTTTCCATGTTTTATCAATGTAAAGCAGTTTCTTATTGTTTTGTTTTGTTATAAATATATTTGTAGGTGTTTAGAGGAAGGGGCAGAGATGTTTATGCTGAAACCCTTGAAACAATCTGATGTTGTGAAGCTCAAATGCCAATTCATGAACTGA

mRNA sequence

ATGGAGActtcatcttcttcttcgtcttcttcttcttcATGTATGAAATGGAGCTGTGAAAATGGGTATCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTGCTAAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTGAGTGCTTTGGAGTTCTTAGGATTGTTGGATGAACATAATCAACACACCAACTTTGAACGCTCCAATCAGAGGTCAAAAGTGAATATGATCATCACTGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGAAGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCAGAAAACGTGCCCACTCGCATCAACAAGTGTTTAGAGGAAGGGGCAGAGATGTTTATGCTGAAACCCTTGAAACAATCTGATGTTGTGAAGCTCAAATGCCAATTCATGAACTGA

Coding sequence (CDS)

ATGGAGACTTCATCTTCTTCTTCGTCTTCTTCTTCTTCATGTATGAAATGGAGCTGTGAAAATGGGTATCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTGCTAAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTGAGTGCTTTGGAGTTCTTAGGATTGTTGGATGAACATAATCAACACACCAACTTTGAACGCTCCAATCAGAGGTCAAAAGTGAATATGATCATCACTGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGAAGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCAGAAAACGTGCCCACTCGCATCAACAAGTGTTTAGAGGAAGGGGCAGAGATGTTTATGCTGAAACCCTTGAAACAATCTGATGTTGTGAAGCTCAAATGCCAATTCATGAACTGA

Protein sequence

METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN*

Homology

[Close]

BLAST of Cucsa.143870 vs. Swiss-Prot
Match: ARR17_ARATH (Two-component response regulator ARR17 OS=Arabidopsis thaliana GN=ARR17 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-46
Identity = 97/151 (64.24%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 9   SSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD 68
           S S SC+    E   + HVLAVDDNL+DRKLVE++LK SSCKVTTAENG+ ALE+LGL D
Sbjct: 7   SGSDSCLSSMEE---ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 66

Query: 69  EHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTR 128
                   +      KVN+IITDYCMPGM+G+ELLKK+K SS +KEVPVV++SSEN+PTR
Sbjct: 67  PQQT----DSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTR 126

Query: 129 INKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           INKCL  GA+MFM KPLK SDV KLKC  +N
Sbjct: 127 INKCLASGAQMFMQKPLKLSDVEKLKCHLLN 150

[Close]

BLAST of Cucsa.143870 vs. Swiss-Prot
Match: ARR16_ARATH (Two-component response regulator ARR16 OS=Arabidopsis thaliana GN=ARR16 PE=1 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.2e-45
Identity = 93/134 (69.40%), Postives = 111/134 (82.84%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRSKV 85
           HVLAVDDNL+DRKLVE+LLK S CKVTTAEN + ALE+LGL D+ NQH +    N   KV
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQ-NQHIDALTCNVM-KV 89

Query: 86  NMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPL 145
           ++IITDYCMPGM+G+ELLKK+K SS ++EVPVV++SSEN+PTRINKCL  GA+MFM KPL
Sbjct: 90  SLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKPL 149

Query: 146 KQSDVVKLKCQFMN 160
           K +DV KLKC  MN
Sbjct: 150 KLADVEKLKCHLMN 161

[Close]

BLAST of Cucsa.143870 vs. Swiss-Prot
Match: ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=2 SV=2)

HSP 1 Score: 164.9 bits (416), Expect = 7.5e-40
Identity = 78/129 (60.47%), Postives = 104/129 (80.62%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRSKV 85
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +   + +   Q   V
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69

Query: 86  NMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPL 145
           N+IITDYCMPGM+GY+LLKKIK SS ++++PVV++SS+N+P+RIN+CLEEGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

Query: 146 KQSDVVKLK 155
           + SD+ KLK
Sbjct: 130 RLSDMSKLK 138

[Close]

BLAST of Cucsa.143870 vs. Swiss-Prot
Match: ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 7.5e-40
Identity = 78/129 (60.47%), Postives = 104/129 (80.62%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRSKV 85
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +   + +   Q   V
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69

Query: 86  NMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPL 145
           N+IITDYCMPGM+GY+LLKKIK SS ++++PVV++SS+N+P+RIN+CLEEGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

Query: 146 KQSDVVKLK 155
           + SD+ KLK
Sbjct: 130 RLSDMSKLK 138

[Close]

BLAST of Cucsa.143870 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.8e-40
Identity = 78/129 (60.47%), Postives = 104/129 (80.62%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRSKV 85
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +   + +   Q   V
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVGV 69

Query: 86  NMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKPL 145
           N+IITDYCMPGM+GY+LLKKIK SS ++++PVV++SS+N+P+RIN+CLEEGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

Query: 146 KQSDVVKLK 155
           + SD+ KLK
Sbjct: 130 RLSDMSKLK 138

[Close]

BLAST of Cucsa.143870 vs. TrEMBL
Match: A0A0A0KMB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223020 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 1.1e-82
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA
Sbjct: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60

Query: 61  LEFLGLLDEHNQHTNFERSN---QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120
           LEFLGLLDEHNQHTNFERSN   QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV
Sbjct: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120

Query: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN
Sbjct: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 162

[Close]

BLAST of Cucsa.143870 vs. TrEMBL
Match: M5XFZ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017797mg PE=4 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 2.8e-54
Identity = 113/158 (71.52%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           ME SS+SSSSSSS  K   EN  QPHVLAVDD+++DRKL+EKLLKN SCKVTTAENG+ A
Sbjct: 1   MEASSASSSSSSSSSKGFMENVEQPHVLAVDDSIIDRKLIEKLLKNLSCKVTTAENGLRA 60

Query: 61  LEFLGLLDEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 120
           LEFLGL D    H N       SKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++
Sbjct: 61  LEFLGLGD----HQNSSLEGNISKVNLVITDYCMPGMTGYELLKKIKESSLMKEVPVVIM 120

Query: 121 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFM 159
           SSE VP RINKCLEEGA+MFMLKPL+QSD+ KL+C  M
Sbjct: 121 SSEYVPNRINKCLEEGAQMFMLKPLRQSDIKKLRCHLM 154

[Close]

BLAST of Cucsa.143870 vs. TrEMBL
Match: C6SX49_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G223000 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 9.2e-53
Identity = 110/150 (73.33%), Postives = 122/150 (81.33%), Query Frame = 1


Query: 10  SSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDE 69
           ++SS   W  E+G  PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE LGL   
Sbjct: 2   AASSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSG 61

Query: 70  HNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRI 129
              + N      RSKVNMIITDYCMPGM+GYELLKKIK SS MKEVPVV++SSEN+PTRI
Sbjct: 62  GQNNMN-----GRSKVNMIITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRI 121

Query: 130 NKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           NKCLEEGA+MF+LKPLKQSDV KL CQ MN
Sbjct: 122 NKCLEEGAQMFILKPLKQSDVRKLTCQLMN 146

[Close]

BLAST of Cucsa.143870 vs. TrEMBL
Match: A0A151SG03_CAJCA (Two-component response regulator ARR17 OS=Cajanus cajan GN=KK1_024334 PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 5.9e-52
Identity = 110/152 (72.37%), Postives = 123/152 (80.92%), Query Frame = 1


Query: 8   SSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 67
           ++ SSS   W  E    PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE LGL 
Sbjct: 2   AAPSSSSSTWVMETSDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLT 61

Query: 68  DEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPT 127
               Q+T     N RSKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++SSEN+PT
Sbjct: 62  SG-GQNT----MNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPT 121

Query: 128 RINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           RINKCLEEGA+MF+LKPLKQSDV KL CQ MN
Sbjct: 122 RINKCLEEGAQMFILKPLKQSDVKKLTCQLMN 148

[Close]

BLAST of Cucsa.143870 vs. TrEMBL
Match: C6TAY9_SOYBN (Uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.0e-51
Identity = 109/150 (72.67%), Postives = 122/150 (81.33%), Query Frame = 1


Query: 10  SSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDE 69
           ++ S   W  E+G  PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE LGL   
Sbjct: 2   AAGSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSG 61

Query: 70  HNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRI 129
             Q+T     N RSKVNM+ITDYCMPGM+GYELLKKIK SS  KEVPVV++SSEN+PTRI
Sbjct: 62  -GQNT----MNGRSKVNMVITDYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRI 121

Query: 130 NKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           NKCLEEGA+MF+LKPLKQSDV KL CQ MN
Sbjct: 122 NKCLEEGAQMFILKPLKQSDVKKLTCQLMN 146

[Close]

BLAST of Cucsa.143870 vs. TAIR10
Match: AT3G56380.1 (AT3G56380.1 response regulator 17)

HSP 1 Score: 186.8 bits (473), Expect = 1.0e-47
Identity = 97/151 (64.24%), Postives = 115/151 (76.16%), Query Frame = 1


Query: 9   SSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD 68
           S S SC+    E   + HVLAVDDNL+DRKLVE++LK SSCKVTTAENG+ ALE+LGL D
Sbjct: 7   SGSDSCLSSMEE---ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 66

Query: 69  EHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTR 128
                   +      KVN+IITDYCMPGM+G+ELLKK+K SS +KEVPVV++SSEN+PTR
Sbjct: 67  PQQT----DSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTR 126

Query: 129 INKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           INKCL  GA+MFM KPLK SDV KLKC  +N
Sbjct: 127 INKCLASGAQMFMQKPLKLSDVEKLKCHLLN 150

[Close]

BLAST of Cucsa.143870 vs. TAIR10
Match: AT2G40670.2 (AT2G40670.2 response regulator 16)

HSP 1 Score: 179.9 bits (455), Expect = 1.3e-45
Identity = 93/135 (68.89%), Postives = 112/135 (82.96%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRSKV 85
           HVLAVDDNL+DRKLVE+LLK S CKVTTAEN + ALE+LGL D+ NQH +    N   KV
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQ-NQHIDALTCNVM-KV 89

Query: 86  NMIITDYCMPGMSGYELLKKIKR-SSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLKP 145
           ++IITDYCMPGM+G+ELLKK+K+ SS ++EVPVV++SSEN+PTRINKCL  GA+MFM KP
Sbjct: 90  SLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQKP 149

Query: 146 LKQSDVVKLKCQFMN 160
           LK +DV KLKC  MN
Sbjct: 150 LKLADVEKLKCHLMN 162

[Close]

BLAST of Cucsa.143870 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 161.8 bits (408), Expect = 3.6e-40
Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERS---NQR 85
           HVLAVDD+L DRK++E+LL+ SSC+VTT ++G  ALEFLGL  + N       S   +Q 
Sbjct: 10  HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69

Query: 86  SKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFML 145
            ++N+IITDYCMPGM+GY+LLKK+K S+  + +PVV++SSENVP RI++CLEEGAE F L
Sbjct: 70  VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129

Query: 146 KPLKQSDVVKLKCQFM 159
           KP+K +D+ KLK   M
Sbjct: 130 KPVKLADLTKLKPHMM 145

[Close]

BLAST of Cucsa.143870 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-39
Identity = 81/140 (57.86%), Postives = 108/140 (77.14%), Query Frame = 1


Query: 24  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD--EHNQHTNFERS-- 83
           Q HVLAVDD+L DRKL+E+LL+ SSC+VTT ++G  ALEFLGL    + N    F ++  
Sbjct: 8   QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67

Query: 84  -NQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAE 143
            +Q  +VN+IITDYCMPGM+GY+LLKK+K SS  +++PVV++SSENVP RI++CLEEGAE
Sbjct: 68  NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 127

Query: 144 MFMLKPLKQSDVVKLKCQFM 159
            F LKP++ +D+ KLK   M
Sbjct: 128 EFFLKPVRLADLNKLKPHMM 147

[Close]

BLAST of Cucsa.143870 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 158.7 bits (400), Expect = 3.0e-39
Identity = 82/131 (62.60%), Postives = 105/131 (80.15%), Query Frame = 1


Query: 24  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNQRS 83
           Q HVLAVDD+LVDR ++E+LL+ +SCKVT  ++G  ALEFLGL D+      F+R     
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL-DDDKAAVEFDRL---- 91

Query: 84  KVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFMLK 143
           KV++IITDYCMPGM+GYELLKKIK S+  KEVPVV++SSENV TRI++CLEEGAE F+LK
Sbjct: 92  KVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDFLLK 151

Query: 144 PLKQSDVVKLK 155
           P+K +DV +L+
Sbjct: 152 PVKLADVKRLR 157

[Close]

BLAST of Cucsa.143870 vs. NCBI nr
Match: gi|449457395|ref|XP_004146434.1| (PREDICTED: two-component response regulator ARR17 isoform X1 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 1.6e-82
Identity = 159/162 (98.15%), Postives = 159/162 (98.15%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA
Sbjct: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60

Query: 61  LEFLGLLDEHNQHTNFERSN---QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120
           LEFLGLLDEHNQHTNFERSN   QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV
Sbjct: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120

Query: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN
Sbjct: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 162

[Close]

BLAST of Cucsa.143870 vs. NCBI nr
Match: gi|778701578|ref|XP_011655050.1| (PREDICTED: two-component response regulator ARR17 isoform X2 [Cucumis sativus])

HSP 1 Score: 312.8 bits (800), Expect = 3.5e-82
Identity = 158/159 (99.37%), Postives = 158/159 (99.37%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA
Sbjct: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60

Query: 61  LEFLGLLDEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 120
           LEFLGLLDEHNQHTNFERSN RSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV
Sbjct: 61  LEFLGLLDEHNQHTNFERSN-RSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 120

Query: 121 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN
Sbjct: 121 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 158

[Close]

BLAST of Cucsa.143870 vs. NCBI nr
Match: gi|1012256750|ref|XP_015945037.1| (PREDICTED: two-component response regulator ARR17-like [Arachis duranensis])

HSP 1 Score: 226.1 bits (575), Expect = 4.4e-56
Identity = 115/156 (73.72%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 4   SSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 63
           S+ SSSSS S   W  EN   PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALEF
Sbjct: 3   STGSSSSSWSSSNWVMENAATPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEF 62

Query: 64  LGLLDEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSE 123
           LGL D           N RSKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++SSE
Sbjct: 63  LGLTDSEQN-----AMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSE 122

Query: 124 NVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           N+PTRIN+CLEEGA+MFMLKPLKQSDV KL CQ MN
Sbjct: 123 NIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153

[Close]

BLAST of Cucsa.143870 vs. NCBI nr
Match: gi|1021576127|ref|XP_016179276.1| (PREDICTED: two-component response regulator ARR17-like [Arachis ipaensis])

HSP 1 Score: 226.1 bits (575), Expect = 4.4e-56
Identity = 115/156 (73.72%), Postives = 126/156 (80.77%), Query Frame = 1


Query: 4   SSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 63
           S+ SSSSS S   W  EN   PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALEF
Sbjct: 3   STGSSSSSWSSSNWVMENAAAPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEF 62

Query: 64  LGLLDEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSE 123
           LGL D           N RSKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++SSE
Sbjct: 63  LGLTDSEQN-----AMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSE 122

Query: 124 NVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 160
           N+PTRIN+CLEEGA+MFMLKPLKQSDV KL CQ MN
Sbjct: 123 NIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153

[Close]

BLAST of Cucsa.143870 vs. NCBI nr
Match: gi|596026968|ref|XP_007219229.1| (hypothetical protein PRUPE_ppa017797mg [Prunus persica])

HSP 1 Score: 219.5 bits (558), Expect = 4.1e-54
Identity = 113/158 (71.52%), Postives = 128/158 (81.01%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           ME SS+SSSSSSS  K   EN  QPHVLAVDD+++DRKL+EKLLKN SCKVTTAENG+ A
Sbjct: 1   MEASSASSSSSSSSSKGFMENVEQPHVLAVDDSIIDRKLIEKLLKNLSCKVTTAENGLRA 60

Query: 61  LEFLGLLDEHNQHTNFERSNQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 120
           LEFLGL D    H N       SKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++
Sbjct: 61  LEFLGLGD----HQNSSLEGNISKVNLVITDYCMPGMTGYELLKKIKESSLMKEVPVVIM 120

Query: 121 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFM 159
           SSE VP RINKCLEEGA+MFMLKPL+QSD+ KL+C  M
Sbjct: 121 SSEYVPNRINKCLEEGAQMFMLKPLRQSDIKKLRCHLM 154

The following BLAST results are available for this feature:

BLAST of Cucsa.143870 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARR17_ARATH	1.8e-46	64.24	Two-component response regulator ARR17 OS=Arabidopsis thaliana GN=ARR17 PE=2 SV=...	[more]
ARR16_ARATH	1.2e-45	69.40	Two-component response regulator ARR16 OS=Arabidopsis thaliana GN=ARR16 PE=1 SV=...	[more]
ORR9_ORYSJ	7.5e-40	60.47	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=...	[more]
ORR9_ORYSI	7.5e-40	60.47	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 ...	[more]
ORR10_ORYSI	9.8e-40	60.47	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=...	[more]

BLAST of Cucsa.143870 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMB0_CUCSA	1.1e-82	98.15	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223020 PE=4 SV=1	[more]
M5XFZ6_PRUPE	2.8e-54	71.52	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017797mg PE=4 SV=1	[more]
C6SX49_SOYBN	9.2e-53	73.33	Uncharacterized protein OS=Glycine max GN=GLYMA_04G223000 PE=2 SV=1	[more]
A0A151SG03_CAJCA	5.9e-52	72.37	Two-component response regulator ARR17 OS=Cajanus cajan GN=KK1_024334 PE=4 SV=1	[more]
C6TAY9_SOYBN	1.0e-51	72.67	Uncharacterized protein OS=Glycine max PE=2 SV=1	[more]

BLAST of Cucsa.143870 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56380.1	1.0e-47	64.24	response regulator 17	[more]
AT2G40670.2	1.3e-45	68.89	response regulator 16	[more]
AT2G41310.1	3.6e-40	57.35	response regulator 3	[more]
AT3G57040.1	1.0e-39	57.86	response regulator 9	[more]
AT1G59940.1	3.0e-39	62.60	response regulator 3	[more]

BLAST of Cucsa.143870 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457395\|ref\|XP_004146434.1\|	1.6e-82	98.15	PREDICTED: two-component response regulator ARR17 isoform X1 [Cucumis sativus]	[more]
gi\|778701578\|ref\|XP_011655050.1\|	3.5e-82	99.37	PREDICTED: two-component response regulator ARR17 isoform X2 [Cucumis sativus]	[more]
gi\|1012256750\|ref\|XP_015945037.1\|	4.4e-56	73.72	PREDICTED: two-component response regulator ARR17-like [Arachis duranensis]	[more]
gi\|1021576127\|ref\|XP_016179276.1\|	4.4e-56	73.72	PREDICTED: two-component response regulator ARR17-like [Arachis ipaensis]	[more]
gi\|596026968\|ref\|XP_007219229.1\|	4.1e-54	71.52	hypothetical protein PRUPE_ppa017797mg [Prunus persica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.143870.1	Cucsa.143870.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 27..152 score: 1.1
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 25..154 score: 1.7
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 26..158 score: 33
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 25..152 score: 6.97
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 24..152 score: 8.6
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 25..64 score: 1.6E-72coord: 81..159 score: 1.6
None	No IPR available	PANTHER	PTHR26402:SF521	TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED	coord: 25..64 score: 1.6E-72coord: 81..159 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.143870	Cla007300	Watermelon (97103) v1	cgywmB253
Cucsa.143870	Csa5G223020	Cucumber (Chinese Long) v2	cgycuB209
Cucsa.143870	ClCG07G005170	Watermelon (Charleston Gray)	cgywcgB244
Cucsa.143870	CSPI05G11620	Wild cucumber (PI 183967)	cgycpiB212
Cucsa.143870	CmaCh04G001000	Cucurbita maxima (Rimu)	cgycmaB0401
Cucsa.143870	CmoCh04G000990	Cucurbita moschata (Rifu)	cgycmoB0401
Cucsa.143870	Lsi04G010150	Bottle gourd (USVL1VR-Ls)	cgylsiB232
Cucsa.143870	Cp4.1LG01g05900	Cucurbita pepo (Zucchini)	cgycpeB0388
Cucsa.143870	CsaV3_5G011030	Cucumber (Chinese Long) v3	cgycucB217
Cucsa.143870	Cla97C07G133530	Watermelon (97103) v2	cgywmbB244
Cucsa.143870	Bhi07G000410	Wax gourd	cgywgoB283
Cucsa.143870	Carg24469	Silver-seed gourd	carcgyB1028

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.143870	Cucurbita maxima (Rimu)	cgycmaB0400
Cucsa.143870	Cucurbita moschata (Rifu)	cgycmoB0400
Cucsa.143870	Melon (DHL92) v3.5.1	cgymeB241
Cucsa.143870	Cucurbita pepo (Zucchini)	cgycpeB0387
Cucsa.143870	Bottle gourd (USVL1VR-Ls)	cgylsiB231
Cucsa.143870	Melon (DHL92) v3.6.1	cgymedB238
Cucsa.143870	Silver-seed gourd	carcgyB0745
Cucsa.143870	Watermelon (97103) v2	cgywmbB243