CSPI05G11620 (gene) Wild cucumber (PI 183967) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CSPI05G11620
Type	gene
Organism	Cucumis sativus (Wild cucumber (PI 183967))
Description	Two-component response regulator
Location	Chr5 : 10234361 .. 10235854 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTACTTTATTGCTCTAATTTTTATTTCCAGAGAAATTAAAGGTTTTCATATCAATGGAGACTTCATCTTCTTCTTCGTCTTCTTCTTCTTCATGTATGAAATGGAGCTGTGAAAATGGGTATCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTGCTAAAAAACTCCTCTTGTAAAGGTAATACTACTACTTGATTACTTCTTAACTTTCTATTTTTTTGGACTTATTAACATTGGTAGTTATTATACAATAAATATATGCAGTAACGACGGCAGAAAATGGTGTGAGTGCTTTGGAGTTCTTAGGATTGTTGGATGAACATAATCAACACACCAACTTTGAACGCTCCAATGTAAGTACTGAATTCAATTAATTATTTGTAAATTTTTTTTATTAATATTAATAATTAAAATGATTGGGACTTAGGAGTGGCAGCAGAGGTCAAAAGTGAATATGATCATCACTGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGGTCTTCTTCTTCTTCTTCTTTTTCTCAAGAAAATTTGTTCGTTTGTAGAATAAAAAAAAGAAAAAAAGTGATATAATTAATATATTGAATGCAGAGATCTTCGAAGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCAGAAAACGTGCCCACTCGCATCAACAAGTTTGTCTTTTCTTTTTCTTTTCCTTTTTTCACTCACTTTTTTCACTTTTACCATTTCTCTTTTTATTATTTCATCTTACAAACAAAGAGTATTTTTAAGATAACAATCTCTTTTAAAGCACCAACACATTTATGAGTTAAGAGTCATATATTGCAAATTAAATATATAGTTAAAGTTTGTTAAACCATTTTGCAAAACAAAACAACCACATTCACTATCTTTAGATTATCTAAAGAAATTAAAAATATGTTTTCCTTTTCTAAATTATATTTTTAAAACTATTCAAATTTGTTTCAAAATGAACCTTTTCTTTTTTGATTTAAAAAAAAAACGAAATTGAACACTTCAAAATATACTGTCAATAGAGGGAGTAGAATGTATTATTTAGTGCTTTTAAATTTATGAGCTAAATAAATTGATGCCACCTTAAAGTTTATAAACACCATTTAAAAGAATTCACATCTTAAAAATAAAACCCAATTTGTAATATGGAAATGATCTTTCTTCTTAATTTGATTGTTTCCATGTTTTATCAATGTAAAGCAGTTTCTTATTGTTTTGTTTTGTTATAAATATATTTGTAGGTGTTTAGAGGAAGGGGCAGAGATGTTTATGCTGAAACCCTTGAAACAATCTGATGTTGTGAAGCTCAAATGCCAATTCATGAACTGAAAAATGTTTAGAGATTATATATATATATATATGTAATTTCCAATTCTCATAATTAGTTAGGATGAGGGTGAGGTTGAGGGTGTTATATGCAAGTTTTGTGGAAGGGTTAGGGG

mRNA sequence

ATGGAGACTTCATCTTCTTCTTCGTCTTCTTCTTCTTCATGTATGAAATGGAGCTGTGAAAATGGGTATCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTGCTAAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTGAGTGCTTTGGAGTTCTTAGGATTGTTGGATGAACATAATCAACACACCAACTTTGAACGCTCCAATGAGTGGCAGCAGAGGTCAAAAGTGAATATGATCATCACTGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGAAGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCAGAAAACGTGCCCACTCGCATCAACAAGTGTTTAGAGGAAGGGGCAGAGATGTTTATGCTGAAACCCTTGAAACAATCTGATGTTGTGAAGCTCAAATGCCAATTCATGAACTGA

Coding sequence (CDS)

ATGGAGACTTCATCTTCTTCTTCGTCTTCTTCTTCTTCATGTATGAAATGGAGCTGTGAAAATGGGTATCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTGCTAAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTGAGTGCTTTGGAGTTCTTAGGATTGTTGGATGAACATAATCAACACACCAACTTTGAACGCTCCAATGAGTGGCAGCAGAGGTCAAAAGTGAATATGATCATCACTGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGAGATCTTCGAAGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCAGAAAACGTGCCCACTCGCATCAACAAGTGTTTAGAGGAAGGGGCAGAGATGTTTATGCTGAAACCCTTGAAACAATCTGATGTTGTGAAGCTCAAATGCCAATTCATGAACTGA

Homology

[Close]

BLAST of CSPI05G11620 vs. Swiss-Prot
Match: ARR17_ARATH (Two-component response regulator ARR17 OS=Arabidopsis thaliana GN=ARR17 PE=2 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.4e-46
Identity = 97/154 (62.99%), Postives = 118/154 (76.62%), Query Frame = 1


Query: 9   SSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD 68
           S S SC+    E   + HVLAVDDNL+DRKLVE++LK SSCKVTTAENG+ ALE+LGL D
Sbjct: 7   SGSDSCLSSMEE---ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 66

Query: 69  EHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENV 128
                   ++++      KVN+IITDYCMPGM+G+ELLKK+K SS +KEVPVV++SSEN+
Sbjct: 67  P-------QQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENI 126

Query: 129 PTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           PTRINKCL  GA+MFM KPLK SDV KLKC  +N
Sbjct: 127 PTRINKCLASGAQMFMQKPLKLSDVEKLKCHLLN 150

[Close]

BLAST of CSPI05G11620 vs. Swiss-Prot
Match: ARR16_ARATH (Two-component response regulator ARR16 OS=Arabidopsis thaliana GN=ARR16 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 93/137 (67.88%), Postives = 111/137 (81.02%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQQR 85
           HVLAVDDNL+DRKLVE+LLK S CKVTTAEN + ALE+LGL D+ NQH +    N     
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQ-NQHIDALTCNVM--- 89

Query: 86  SKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFML 145
            KV++IITDYCMPGM+G+ELLKK+K SS ++EVPVV++SSEN+PTRINKCL  GA+MFM 
Sbjct: 90  -KVSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMSSENIPTRINKCLASGAQMFMQ 149

Query: 146 KPLKQSDVVKLKCQFMN 163
           KPLK +DV KLKC  MN
Sbjct: 150 KPLKLADVEKLKCHLMN 161

[Close]

BLAST of CSPI05G11620 vs. Swiss-Prot
Match: ARR8_ARATH (Two-component response regulator ARR8 OS=Arabidopsis thaliana GN=ARR8 PE=1 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 3.4e-40
Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQQR 85
           HVLAVDD+L DRK++E+LL+ SSC+VTT ++G  ALEFLGL  + N       S +  Q 
Sbjct: 10  HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69

Query: 86  SKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFML 145
            ++N+IITDYCMPGM+GY+LLKK+K S+  + +PVV++SSENVP RI++CLEEGAE F L
Sbjct: 70  VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129

Query: 146 KPLKQSDVVKLKCQFM 162
           KP+K +D+ KLK   M
Sbjct: 130 KPVKLADLTKLKPHMM 145

[Close]

BLAST of CSPI05G11620 vs. Swiss-Prot
Match: ORR4_ORYSI (Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.9e-40
Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQ-Q 85
           HVLAVDD+L+DRKL+E LLKNSS +VTT ++G  ALE LGL DE +  ++   S+    Q
Sbjct: 11  HVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQ 70

Query: 86  RSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFM 145
              VN+IITDYCMPGM+GY+LLK++K SS +K++PVV++SSENVP RIN+CLE+GAE F 
Sbjct: 71  EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFF 130

Query: 146 LKPLKQSDVVKLKCQFM 162
           LKP+K +D+ KLK   +
Sbjct: 131 LKPVKLADMKKLKSHLL 147

[Close]

BLAST of CSPI05G11620 vs. Swiss-Prot
Match: ORR4_ORYSJ (Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 9.9e-40
Identity = 81/137 (59.12%), Postives = 107/137 (78.10%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQ-Q 85
           HVLAVDD+L+DRKL+E LLKNSS +VTT ++G  ALE LGL DE +  ++   S+    Q
Sbjct: 11  HVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDEGDDSSSSPSSSSPDHQ 70

Query: 86  RSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFM 145
              VN+IITDYCMPGM+GY+LLK++K SS +K++PVV++SSENVP RIN+CLE+GAE F 
Sbjct: 71  EIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEEFF 130

Query: 146 LKPLKQSDVVKLKCQFM 162
           LKP+K +D+ KLK   +
Sbjct: 131 LKPVKLADMKKLKSHLL 147

[Close]

BLAST of CSPI05G11620 vs. TrEMBL
Match: A0A0A0KMB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223020 PE=4 SV=1)

HSP 1 Score: 322.8 bits (826), Expect = 2.4e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA
Sbjct: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60

Query: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120
           LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV
Sbjct: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120

Query: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN
Sbjct: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 162

[Close]

BLAST of CSPI05G11620 vs. TrEMBL
Match: C6SX49_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_04G223000 PE=2 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 3.5e-52
Identity = 110/153 (71.90%), Postives = 122/153 (79.74%), Query Frame = 1


Query: 10  SSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDE 69
           ++SS   W  E+G  PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE LGL   
Sbjct: 2   AASSSSNWVMESGDVPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSG 61

Query: 70  HNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVP 129
              + N         RSKVNMIITDYCMPGM+GYELLKKIK SS MKEVPVV++SSEN+P
Sbjct: 62  GQNNMN--------GRSKVNMIITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIP 121

Query: 130 TRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           TRINKCLEEGA+MF+LKPLKQSDV KL CQ MN
Sbjct: 122 TRINKCLEEGAQMFILKPLKQSDVRKLTCQLMN 146

[Close]

BLAST of CSPI05G11620 vs. TrEMBL
Match: M5XFZ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017797mg PE=4 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 6.0e-52
Identity = 113/161 (70.19%), Postives = 129/161 (80.12%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           ME SS+SSSSSSS  K   EN  QPHVLAVDD+++DRKL+EKLLKN SCKVTTAENG+ A
Sbjct: 1   MEASSASSSSSSSSSKGFMENVEQPHVLAVDDSIIDRKLIEKLLKNLSCKVTTAENGLRA 60

Query: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120
           LEFLGL D  N       S+     SKVN++ITDYCMPGM+GYELLKKIK SS MKEVPV
Sbjct: 61  LEFLGLGDHQN-------SSLEGNISKVNLVITDYCMPGMTGYELLKKIKESSLMKEVPV 120

Query: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFM 162
           V++SSE VP RINKCLEEGA+MFMLKPL+QSD+ KL+C  M
Sbjct: 121 VIMSSEYVPNRINKCLEEGAQMFMLKPLRQSDIKKLRCHLM 154

[Close]

BLAST of CSPI05G11620 vs. TrEMBL
Match: B9IQ64_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08690g PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.3e-51
Identity = 104/139 (74.82%), Postives = 121/139 (87.05%), Query Frame = 1


Query: 24  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQ 83
           +PHVLAVDD+LVDRKLVE+LLKNSSCKVTTAENG+ ALE+LGL DE       +R++   
Sbjct: 20  EPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDE-------KRTSLED 79

Query: 84  QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMF 143
             SKVN+IITDYCMPGM+GYELLKKIK SS +KE+PVV++SSEN+PTRINKCLEEGA+MF
Sbjct: 80  NVSKVNLIITDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPTRINKCLEEGAQMF 139

Query: 144 MLKPLKQSDVVKLKCQFMN 163
           MLKPLKQSDVVKL+C  MN
Sbjct: 140 MLKPLKQSDVVKLRCNLMN 151

[Close]

BLAST of CSPI05G11620 vs. TrEMBL
Match: E3Q1G8_POPCA (Putative A-type response regulator 8 OS=Populus canadensis GN=dkRR8 PE=2 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 6.7e-51
Identity = 103/139 (74.10%), Postives = 121/139 (87.05%), Query Frame = 1


Query: 24  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQ 83
           +PHVLAVDD+LVDRKLVE+LLKNSSCKVTTAENG+ ALE+LGL DE       +R++   
Sbjct: 20  EPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDE-------KRTSLED 79

Query: 84  QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMF 143
             SKVN+IITDYCMPGM+GYELLKKIK SS +K++PVV++SSEN+PTRINKCLEEGA+MF
Sbjct: 80  NVSKVNLIITDYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIPTRINKCLEEGAQMF 139

Query: 144 MLKPLKQSDVVKLKCQFMN 163
           MLKPLKQSDVVKL+C  MN
Sbjct: 140 MLKPLKQSDVVKLRCNLMN 151

[Close]

BLAST of CSPI05G11620 vs. TAIR10
Match: AT3G56380.1 (AT3G56380.1 response regulator 17)

HSP 1 Score: 186.4 bits (472), Expect = 1.4e-47
Identity = 97/154 (62.99%), Postives = 118/154 (76.62%), Query Frame = 1


Query: 9   SSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD 68
           S S SC+    E   + HVLAVDDNL+DRKLVE++LK SSCKVTTAENG+ ALE+LGL D
Sbjct: 7   SGSDSCLSSMEE---ELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD 66

Query: 69  EHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENV 128
                   ++++      KVN+IITDYCMPGM+G+ELLKK+K SS +KEVPVV++SSEN+
Sbjct: 67  P-------QQTDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENI 126

Query: 129 PTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           PTRINKCL  GA+MFM KPLK SDV KLKC  +N
Sbjct: 127 PTRINKCLASGAQMFMQKPLKLSDVEKLKCHLLN 150

[Close]

BLAST of CSPI05G11620 vs. TAIR10
Match: AT2G40670.2 (AT2G40670.2 response regulator 16)

HSP 1 Score: 179.5 bits (454), Expect = 1.7e-45
Identity = 93/138 (67.39%), Postives = 112/138 (81.16%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQQR 85
           HVLAVDDNL+DRKLVE+LLK S CKVTTAEN + ALE+LGL D+ NQH +    N     
Sbjct: 30  HVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGLGDQ-NQHIDALTCNVM--- 89

Query: 86  SKVNMIITDYCMPGMSGYELLKKIKR-SSKMKEVPVVVVSSENVPTRINKCLEEGAEMFM 145
            KV++IITDYCMPGM+G+ELLKK+K+ SS ++EVPVV++SSEN+PTRINKCL  GA+MFM
Sbjct: 90  -KVSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIMSSENIPTRINKCLASGAQMFM 149

Query: 146 LKPLKQSDVVKLKCQFMN 163
            KPLK +DV KLKC  MN
Sbjct: 150 QKPLKLADVEKLKCHLMN 162

[Close]

BLAST of CSPI05G11620 vs. TAIR10
Match: AT2G41310.1 (AT2G41310.1 response regulator 3)

HSP 1 Score: 166.0 bits (419), Expect = 1.9e-41
Identity = 78/136 (57.35%), Postives = 104/136 (76.47%), Query Frame = 1


Query: 26  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQQR 85
           HVLAVDD+L DRK++E+LL+ SSC+VTT ++G  ALEFLGL  + N       S +  Q 
Sbjct: 10  HVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDDNDPNALSTSPQIHQE 69

Query: 86  SKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMFML 145
            ++N+IITDYCMPGM+GY+LLKK+K S+  + +PVV++SSENVP RI++CLEEGAE F L
Sbjct: 70  VEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEEFFL 129

Query: 146 KPLKQSDVVKLKCQFM 162
           KP+K +D+ KLK   M
Sbjct: 130 KPVKLADLTKLKPHMM 145

[Close]

BLAST of CSPI05G11620 vs. TAIR10
Match: AT3G57040.1 (AT3G57040.1 response regulator 9)

HSP 1 Score: 162.5 bits (410), Expect = 2.1e-40
Identity = 81/140 (57.86%), Postives = 107/140 (76.43%), Query Frame = 1


Query: 24  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD--EHNQHTNFERSNE 83
           Q HVLAVDD+L DRKL+E+LL+ SSC+VTT ++G  ALEFLGL    + N    F ++  
Sbjct: 8   QFHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPV 67

Query: 84  WQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAE 143
             Q  +VN+IITDYCMPGM+GY+LLKK+K SS  +++PVV++SSENVP RI++CLEEGAE
Sbjct: 68  NHQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAE 127

Query: 144 MFMLKPLKQSDVVKLKCQFM 162
            F LKP++ +D+ KLK   M
Sbjct: 128 EFFLKPVRLADLNKLKPHMM 147

[Close]

BLAST of CSPI05G11620 vs. TAIR10
Match: AT1G59940.1 (AT1G59940.1 response regulator 3)

HSP 1 Score: 157.9 bits (398), Expect = 5.2e-39
Identity = 82/134 (61.19%), Postives = 105/134 (78.36%), Query Frame = 1


Query: 24  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHTNFERSNEWQ 83
           Q HVLAVDD+LVDR ++E+LL+ +SCKVT  ++G  ALEFLGL D+      F+R     
Sbjct: 32  QVHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL-DDDKAAVEFDRL---- 91

Query: 84  QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMF 143
              KV++IITDYCMPGM+GYELLKKIK S+  KEVPVV++SSENV TRI++CLEEGAE F
Sbjct: 92  ---KVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSENVMTRIDRCLEEGAEDF 151

Query: 144 MLKPLKQSDVVKLK 158
           +LKP+K +DV +L+
Sbjct: 152 LLKPVKLADVKRLR 157

[Close]

BLAST of CSPI05G11620 vs. NCBI nr
Match: gi|449457395|ref|XP_004146434.1| (PREDICTED: two-component response regulator ARR17 isoform X1 [Cucumis sativus])

HSP 1 Score: 322.8 bits (826), Expect = 3.5e-85
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA
Sbjct: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60

Query: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120
           LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV
Sbjct: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120

Query: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN
Sbjct: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 162

[Close]

BLAST of CSPI05G11620 vs. NCBI nr
Match: gi|778701578|ref|XP_011655050.1| (PREDICTED: two-component response regulator ARR17 isoform X2 [Cucumis sativus])

HSP 1 Score: 307.4 bits (786), Expect = 1.5e-80
Identity = 158/162 (97.53%), Postives = 158/162 (97.53%), Query Frame = 1


Query: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA
Sbjct: 1   METSSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60

Query: 61  LEFLGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120
           LEFLGLLDEHNQHTNFERSN    RSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV
Sbjct: 61  LEFLGLLDEHNQHTNFERSN----RSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPV 120

Query: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN
Sbjct: 121 VVVSSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 158

[Close]

BLAST of CSPI05G11620 vs. NCBI nr
Match: gi|1012256750|ref|XP_015945037.1| (PREDICTED: two-component response regulator ARR17-like [Arachis duranensis])

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 115/159 (72.33%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 4   SSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 63
           S+ SSSSS S   W  EN   PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALEF
Sbjct: 3   STGSSSSSWSSSNWVMENAATPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEF 62

Query: 64  LGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 123
           LGL D           N    RSKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++
Sbjct: 63  LGLTD--------SEQNAMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIM 122

Query: 124 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           SSEN+PTRIN+CLEEGA+MFMLKPLKQSDV KL CQ MN
Sbjct: 123 SSENIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153

[Close]

BLAST of CSPI05G11620 vs. NCBI nr
Match: gi|1021576127|ref|XP_016179276.1| (PREDICTED: two-component response regulator ARR17-like [Arachis ipaensis])

HSP 1 Score: 221.5 bits (563), Expect = 1.1e-54
Identity = 115/159 (72.33%), Postives = 126/159 (79.25%), Query Frame = 1


Query: 4   SSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 63
           S+ SSSSS S   W  EN   PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALEF
Sbjct: 3   STGSSSSSWSSSNWVMENAAAPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEF 62

Query: 64  LGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 123
           LGL D           N    RSKVN++ITDYCMPGM+GYELLKKIK SS MKEVPVV++
Sbjct: 63  LGLTD--------SEQNAMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIM 122

Query: 124 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           SSEN+PTRIN+CLEEGA+MFMLKPLKQSDV KL CQ MN
Sbjct: 123 SSENIPTRINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153

[Close]

BLAST of CSPI05G11620 vs. NCBI nr
Match: gi|1009121637|ref|XP_015877566.1| (PREDICTED: two-component response regulator ARR17 [Ziziphus jujuba])

HSP 1 Score: 213.0 bits (541), Expect = 3.9e-52
Identity = 113/159 (71.07%), Postives = 129/159 (81.13%), Query Frame = 1


Query: 4   SSSSSSSSSSCMKWSCENGYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 63
           +S SSSSSSS  K   E G QPHVLAVDD+L+DRKL+EKLLKNSSCKVTTAENG  ALE 
Sbjct: 3   ASFSSSSSSSSSKGFTETGEQPHVLAVDDSLIDRKLIEKLLKNSSCKVTTAENGPRALEV 62

Query: 64  LGLLDEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVV 123
           LGL D  +QH   E +      SKVNMIITDYCMPGM+GYELLKKIK SS ++EVPVV++
Sbjct: 63  LGLGD--HQHNKLESN-----ASKVNMIITDYCMPGMTGYELLKKIKESSNLREVPVVIM 122

Query: 124 SSENVPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 163
           SSENVPTRINKCLEEGA+MF+LKPL QSD+ +L+C  MN
Sbjct: 123 SSENVPTRINKCLEEGAQMFILKPLNQSDIKRLRCHLMN 154

The following BLAST results are available for this feature:

BLAST of CSPI05G11620 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ARR17_ARATH	2.4e-46	62.99	Two-component response regulator ARR17 OS=Arabidopsis thaliana GN=ARR17 PE=2 SV=...	[more]
ARR16_ARATH	1.6e-45	67.88	Two-component response regulator ARR16 OS=Arabidopsis thaliana GN=ARR16 PE=1 SV=...	[more]
ARR8_ARATH	3.4e-40	57.35	Two-component response regulator ARR8 OS=Arabidopsis thaliana GN=ARR8 PE=1 SV=1	[more]
ORR4_ORYSI	9.9e-40	59.12	Two-component response regulator ORR4 OS=Oryza sativa subsp. indica GN=RR4 PE=2 ...	[more]
ORR4_ORYSJ	9.9e-40	59.12	Two-component response regulator ORR4 OS=Oryza sativa subsp. japonica GN=RR4 PE=...	[more]

BLAST of CSPI05G11620 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMB0_CUCSA	2.4e-85	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223020 PE=4 SV=1	[more]
C6SX49_SOYBN	3.5e-52	71.90	Uncharacterized protein OS=Glycine max GN=GLYMA_04G223000 PE=2 SV=1	[more]
M5XFZ6_PRUPE	6.0e-52	70.19	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017797mg PE=4 SV=1	[more]
B9IQ64_POPTR	2.3e-51	74.82	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08690g PE=4 SV=1	[more]
E3Q1G8_POPCA	6.7e-51	74.10	Putative A-type response regulator 8 OS=Populus canadensis GN=dkRR8 PE=2 SV=1	[more]

BLAST of CSPI05G11620 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G56380.1	1.4e-47	62.99	response regulator 17	[more]
AT2G40670.2	1.7e-45	67.39	response regulator 16	[more]
AT2G41310.1	1.9e-41	57.35	response regulator 3	[more]
AT3G57040.1	2.1e-40	57.86	response regulator 9	[more]
AT1G59940.1	5.2e-39	61.19	response regulator 3	[more]

BLAST of CSPI05G11620 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449457395\|ref\|XP_004146434.1\|	3.5e-85	100.00	PREDICTED: two-component response regulator ARR17 isoform X1 [Cucumis sativus]	[more]
gi\|778701578\|ref\|XP_011655050.1\|	1.5e-80	97.53	PREDICTED: two-component response regulator ARR17 isoform X2 [Cucumis sativus]	[more]
gi\|1012256750\|ref\|XP_015945037.1\|	1.1e-54	72.33	PREDICTED: two-component response regulator ARR17-like [Arachis duranensis]	[more]
gi\|1021576127\|ref\|XP_016179276.1\|	1.1e-54	72.33	PREDICTED: two-component response regulator ARR17-like [Arachis ipaensis]	[more]
gi\|1009121637\|ref\|XP_015877566.1\|	3.9e-52	71.07	PREDICTED: two-component response regulator ARR17 [Ziziphus jujuba]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005622	intracellular
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016301	kinase activity
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI05G11620.1	CSPI05G11620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PFAM	PF00072	Response_reg	coord: 27..155 score: 5.3
IPR001789	Signal transduction response regulator, receiver domain	SMART	SM00448	REC_2	coord: 25..157 score: 2.9
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 26..161 score: 32
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 25..155 score: 1.32
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 24..155 score: 1.2
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 25..64 score: 1.6E-72coord: 84..162 score: 1.6
None	No IPR available	PANTHER	PTHR26402:SF521	TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED	coord: 25..64 score: 1.6E-72coord: 84..162 score: 1.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CSPI05G11620	Cla007300	Watermelon (97103) v1	cpiwmB395
CSPI05G11620	Csa5G223020	Cucumber (Chinese Long) v2	cpicuB240
CSPI05G11620	ClCG07G005170	Watermelon (Charleston Gray)	cpiwcgB420
CSPI05G11620	Lsi04G010150	Bottle gourd (USVL1VR-Ls)	cpilsiB373
CSPI05G11620	CsaV3_5G011030	Cucumber (Chinese Long) v3	cpicucB285
CSPI05G11620	Cla97C07G133530	Watermelon (97103) v2	cpiwmbB412
CSPI05G11620	Bhi07G000410	Wax gourd	cpiwgoB517
CSPI05G11620	Cucsa.143870	Cucumber (Gy14) v1	cgycpiB212
CSPI05G11620	CmaCh04G001000	Cucurbita maxima (Rimu)	cmacpiB757
CSPI05G11620	CmoCh04G000990	Cucurbita moschata (Rifu)	cmocpiB747
CSPI05G11620	Cp4.1LG01g05900	Cucurbita pepo (Zucchini)	cpecpiB438
CSPI05G11620	CsGy5G008880	Cucumber (Gy14) v2	cgybcpiB226
CSPI05G11620	Carg24469	Silver-seed gourd	carcpiB0947

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CSPI05G11620	Cucurbita pepo (Zucchini)	cpecpiB437
CSPI05G11620	Melon (DHL92) v3.6.1	cpimedB351
CSPI05G11620	Silver-seed gourd	carcpiB0706
CSPI05G11620	Cucurbita maxima (Rimu)	cmacpiB756
CSPI05G11620	Cucurbita moschata (Rifu)	cmocpiB746
CSPI05G11620	Melon (DHL92) v3.5.1	cpimeB370