Cla007300 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla007300
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Response regulator protein (AHRD V1 ***- Q9AXD7_DIACA); contains Interpro domain(s) IPR001789 Signal transduction response regulator, receiver region
Location	Chr7 : 6650988 .. 6653145 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCTCCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTACTCAAAAACTCCTCTTGTAAAGGTCAACTTCTTCCCCATTTTTATTTACTACTCCTCTAATCATATCTTTTCATTTCATTTACCCTTTCTTCCATCCTAACCTTTTCATTTTATTTATATTTCTACCCAATTCTTTTTTTCTTTTAACTAAAAACAACTATATTTGTTTTTTTTACTGATTCCATGTCTAAATTTTTAAATTTTTTAAAGAAATAAGTCGATTTTCGATAACTAAAACAAATTGTTTTTGTTTTTTAAACTTGACTAAGAATTCAACTCTTCTATTTTAAAAATATCCTAATCTTATTTTTGAAAAATGGATAATAATTAAATTGATGATTTAAAAAATATGAAGACGACGAGGTACAATTTTAAAAAACAAAAAACGGAAAATCAAATAGTTACTTAACTGAATTTTAGTATTTAATCTTTTTGGTTCCCGAACATATAGGTCAGTTTTATAATATTTTAACCAATTGTGCTAATGAAAATATATATATGTACTAAAATTGTTAAAAGTTTTAAACTAGAAAGACCAAAATGAAAAGTTATTTTTTATTAATTTGTTTTATTTCTATTATTTGCAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATGTAAGTAATTAATTATTAAAAAAAAAACAATTATTTATTTATTTATTTAATAATTATTAAAAAGGAACAGAAAAAAGAATGTCAAGTTATTTATGAAAAAAGTGATTAATTAATGGCAGAGGTCAAAGGTGAACATGATCATCACAGATTATTGCATGCCAGGAATGTCTGGATATGAACTTCTCAAGAAAATCAAGGTTCTATTTTCTTTTATTATCATTTTTTTTTTAATTTTTAAGCCCCCAAAAAAACAATAAAAATTAAATACCATTTTCATCCTTTTCAAACCATACTTACTCAATTTCTAATTTTTCTATTTTTTCACGAAATCTTAAATTTTGTTTGTACTTAATTATTCATTTTTTTTATATAATTTTAATCAAATTTAGTCTTATGAAATTAATTTTTTTTATTAAAACTAGTTAAATAATTATAATAAATTTCATTAAAGGACAAATTTTCACAATTTATGAAGAGCAACCTACTAAAGCTATTTTTTTTTTTTTTTTTTTTTAAAAGCAACCATAAACTAAATAGTATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTATAAAAGCAACCATAGACTAAATAGTATGGACTAATTTTACAATTTATTCAATGTACAAGAACCAATAATTAATTTGGAATGGTAGATTTAAAATTAAATTGAATGAGCTCTAAATACAAGGGCAATTAGATTTTTTTTTTCTTTTTTTAAAATGTGTTTAAGAAAAAAGTAAAAAAGAATCTATTATTTATTGCAGAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTTAGTTTTTCTTTTTCTTTTTCTTTTTCAAAGTAATTAATTAATTTATTTCTTCTTCAATTTTAGCATTTATCTATTTAGTATGTTTTTAATATATATATTTAATTTTTAAAAGAATATTTTTAAGATAACAAATTTATGAGTTAAAAGACATATATTACCAATCAAGCAATTAAGAGTTTGTCGAACTCTTTAAAAAGATGAAAAAAAGAGGAGAAAAAAAAAAAGAAAAAAGAAAAAAGGGTGTATGAGTATTAGCTTAGCTCTAATTAATAATTATTCTCTTAAAGTCAAAGGTTTAAAAATTGGAAATTCAATATCTTATTAAGCGGTTTTAAATGTAGAAACTAAATAAGTCGAATTTTCTCTCTATTGTTTCCACATTTTATCTAAAGCACTTTGTTTTTTGGTTAGGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA

mRNA sequence

ATGGAGGCTCCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA

Coding sequence (CDS)

ATGGAGGCTCCTTCTTCTTCTTCTTCAATCAAATGGAGCTCTGAAAATGAAAATGGATCTCAACCTCATGTTCTTGCTGTTGATGATAATCTTGTTGATCGTAAACTTGTTGAGAAATTACTCAAAAACTCCTCTTGTAAAGTAACGACGGCAGAAAATGGTGTTAGTGCTTTGGAGTTCTTAGGTTTGTTGGATGAACATAATCAACACAGCAACTTAGAATGCTCCAATAGATCTTCGATGATGAAGGAAGTTCCTGTGGTGGTTGTATCATCGGAAAACGTGCCCACTCGCATCAACAAGTGTTTGAAAGAAGGAGCAGAGATGTTCATGCTGAAACCTTTGAAACAATCTGATGTGGTGAAACTCAAGTGCCAGTTGATGAACTGA

Protein sequence

MEAPSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQHSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN

Homology

[Close]

BLAST of Cla007300 vs. Swiss-Prot
Match: ORR9_ORYSJ (Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-22
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 1


Query: 23  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQ------------- 82
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +              
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69

Query: 83  --------------HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPL 129
                         +  L+    SS ++++PVV++SS+N+P+RIN+CL+EGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

[Close]

BLAST of Cla007300 vs. Swiss-Prot
Match: ORR9_ORYSI (Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-22
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 1


Query: 23  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQ------------- 82
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +              
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVAV 69

Query: 83  --------------HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPL 129
                         +  L+    SS ++++PVV++SS+N+P+RIN+CL+EGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

[Close]

BLAST of Cla007300 vs. Swiss-Prot
Match: ORR10_ORYSI (Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=2 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-22
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 1


Query: 23  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQ------------- 82
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +              
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVGV 69

Query: 83  --------------HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPL 129
                         +  L+    SS ++++PVV++SS+N+P+RIN+CL+EGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

[Close]

BLAST of Cla007300 vs. Swiss-Prot
Match: ORR10_ORYSJ (Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 PE=2 SV=2)

HSP 1 Score: 105.9 bits (263), Expect = 3.3e-22
Identity = 57/133 (42.86%), Postives = 81/133 (60.90%), Query Frame = 1


Query: 23  HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQ------------- 82
           HVLAVDD+L DRKL+E+LLK SS +VTT ++G  ALEFLGL D  +              
Sbjct: 10  HVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDHEDSPISTQSDQQEVGV 69

Query: 83  --------------HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPL 129
                         +  L+    SS ++++PVV++SS+N+P+RIN+CL+EGA+ F LKP+
Sbjct: 70  NLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADEFFLKPV 129

[Close]

BLAST of Cla007300 vs. Swiss-Prot
Match: ARR15_ARATH (Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 7.4e-22
Identity = 60/140 (42.86%), Postives = 84/140 (60.00%), Query Frame = 1


Query: 13  SSENENGSQP--HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQ- 72
           SS   + S P  HVLAVDD+ VDRK++E+LLK S+CKVTT E+G  AL++LGL  ++   
Sbjct: 7   SSSLSSSSSPELHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGLDGDNGSS 66

Query: 73  ---------------------HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAE 129
                                +  L+    SS ++E+PVV++SSEN+  RI +C+ EGAE
Sbjct: 67  GLKDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAE 126

[Close]

BLAST of Cla007300 vs. TrEMBL
Match: A0A0A0KMB0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223020 PE=4 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 6.1e-39
Identity = 96/155 (61.94%), Postives = 104/155 (67.10%), Query Frame = 1


Query: 5   SSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 64
           SSSS +KWS EN  G QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL
Sbjct: 10  SSSSCMKWSCEN--GYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 69

Query: 65  DEHNQHSNLECSNRSSMMKEVPVVVV--------------------SSENVPTR------ 124
           DEHNQH+N E SN      +V +++                       + VP        
Sbjct: 70  DEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSEN 129

Query: 125 ----INKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
               INKCL+EGAEMFMLKPLKQSDVVKLKCQ MN
Sbjct: 130 VPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 162

[Close]

BLAST of Cla007300 vs. TrEMBL
Match: W9SAW3_9ROSA (Two-component response regulator OS=Morus notabilis GN=L484_011250 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 6.3e-36
Identity = 91/152 (59.87%), Postives = 107/152 (70.39%), Query Frame = 1


Query: 1   MEAPSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 60
           ME+ SSSSS K   EN    QPHVLAVDDN++DRKLVEKLL+NSSC+VTTAENG  ALEF
Sbjct: 1   MESGSSSSSSKVLMENIV-DQPHVLAVDDNVIDRKLVEKLLQNSSCRVTTAENGPRALEF 60

Query: 61  LGLLDE-HNQ----------------------HSNLECSNRSSMMKEVPVVVVSSENVPT 120
           LGL D  HN                       +  L+    SS+MKEVPVV++SSENVPT
Sbjct: 61  LGLGDHRHNALEGNVSKVNLIITDYCMPGMTGYDLLKKIKESSVMKEVPVVIMSSENVPT 120

Query: 121 RINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
           RINKCL+EGA+MFM+KPLKQSD+ +L+C LMN
Sbjct: 121 RINKCLEEGAQMFMIKPLKQSDIKRLRCHLMN 151

[Close]

BLAST of Cla007300 vs. TrEMBL
Match: M5XFZ6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017797mg PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 2.4e-35
Identity = 88/154 (57.14%), Postives = 104/154 (67.53%), Query Frame = 1


Query: 1   MEAPSSSSSIKWSSEN---ENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSA 60
           MEA S+SSS   SS     EN  QPHVLAVDD+++DRKL+EKLLKN SCKVTTAENG+ A
Sbjct: 1   MEASSASSSSSSSSSKGFMENVEQPHVLAVDDSIIDRKLIEKLLKNLSCKVTTAENGLRA 60

Query: 61  LEFLGLLDEHNQ-----------------------HSNLECSNRSSMMKEVPVVVVSSEN 120
           LEFLGL D  N                        +  L+    SS+MKEVPVV++SSE 
Sbjct: 61  LEFLGLGDHQNSSLEGNISKVNLVITDYCMPGMTGYELLKKIKESSLMKEVPVVIMSSEY 120

Query: 121 VPTRINKCLKEGAEMFMLKPLKQSDVVKLKCQLM 129
           VP RINKCL+EGA+MFMLKPL+QSD+ KL+C LM
Sbjct: 121 VPNRINKCLEEGAQMFMLKPLRQSDIKKLRCHLM 154

[Close]

BLAST of Cla007300 vs. TrEMBL
Match: B9IQ64_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08690g PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-35
Identity = 82/132 (62.12%), Postives = 97/132 (73.48%), Query Frame = 1


Query: 21  QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLDEHNQ----------- 80
           +PHVLAVDD+LVDRKLVE+LLKNSSCKVTTAENG+ ALE+LGL DE              
Sbjct: 20  EPHVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNVSKVNL 79

Query: 81  ------------HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQ 130
                       +  L+    SSM+KE+PVV++SSEN+PTRINKCL+EGA+MFMLKPLKQ
Sbjct: 80  IITDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPTRINKCLEEGAQMFMLKPLKQ 139

[Close]

BLAST of Cla007300 vs. TrEMBL
Match: A0A151SG03_CAJCA (Two-component response regulator ARR17 OS=Cajanus cajan GN=KK1_024334 PE=4 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 4.1e-35
Identity = 90/151 (59.60%), Postives = 102/151 (67.55%), Query Frame = 1


Query: 1   MEAPSSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEF 60
           M APSSSSS  W  E  +   PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE 
Sbjct: 1   MAAPSSSSST-WVMETSD--VPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALEL 60

Query: 61  LGLLDEHNQ----------------------HSNLECSNRSSMMKEVPVVVVSSENVPTR 120
           LGL                            +  L+    SS+MKEVPVV++SSEN+PTR
Sbjct: 61  LGLTSGGQNTMNGRSKVNLVITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTR 120

Query: 121 INKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
           INKCL+EGA+MF+LKPLKQSDV KL CQLMN
Sbjct: 121 INKCLEEGAQMFILKPLKQSDVKKLTCQLMN 148

[Close]

BLAST of Cla007300 vs. NCBI nr
Match: gi|657955804|ref|XP_008369376.1| (PREDICTED: two-component response regulator ARR17 isoform X2 [Malus domestica])

HSP 1 Score: 169.9 bits (429), Expect = 3.0e-39
Identity = 92/126 (73.02%), Postives = 103/126 (81.75%), Query Frame = 1


Query: 5   SSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 64
           SSSSS K    N    QPHVLAVDD+LVDRKL+EKLL N SCKVTTAENG SALEFLGL 
Sbjct: 3   SSSSSSKGFMANVE--QPHVLAVDDSLVDRKLIEKLLTNLSCKVTTAENGASALEFLGLG 62

Query: 65  DEHNQ-HSNLECSNRSSMMKEVPVVVVSSENVPTRINKCLKEGAEMFMLKPLKQSDVVKL 124
           D+HN   SN+  S  SS+MKEVPVV++SSENVPTRINKCL+EGA+MFMLKPLKQSD+ KL
Sbjct: 63  DQHNSLESNVSNSKESSIMKEVPVVIMSSENVPTRINKCLEEGAQMFMLKPLKQSDMKKL 122

Query: 125 KCQLMN 130
           +  LMN
Sbjct: 123 RYHLMN 126

[Close]

BLAST of Cla007300 vs. NCBI nr
Match: gi|778701578|ref|XP_011655050.1| (PREDICTED: two-component response regulator ARR17 isoform X2 [Cucumis sativus])

HSP 1 Score: 168.7 bits (426), Expect = 6.7e-39
Identity = 99/152 (65.13%), Postives = 106/152 (69.74%), Query Frame = 1


Query: 5   SSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 64
           SSSS +KWS EN  G QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL
Sbjct: 10  SSSSCMKWSCEN--GYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 69

Query: 65  DEHNQHSNLECSNRS-----------------SMMKEVPVVVVSSENVPTR--------- 124
           DEHNQH+N E SNRS                  ++K++       E VP           
Sbjct: 70  DEHNQHTNFERSNRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKE-VPVVVVSSENVPT 129

Query: 125 -INKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
            INKCL+EGAEMFMLKPLKQSDVVKLKCQ MN
Sbjct: 130 RINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 158

[Close]

BLAST of Cla007300 vs. NCBI nr
Match: gi|449457395|ref|XP_004146434.1| (PREDICTED: two-component response regulator ARR17 isoform X1 [Cucumis sativus])

HSP 1 Score: 168.3 bits (425), Expect = 8.7e-39
Identity = 96/155 (61.94%), Postives = 104/155 (67.10%), Query Frame = 1


Query: 5   SSSSSIKWSSENENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 64
           SSSS +KWS EN  G QPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL
Sbjct: 10  SSSSCMKWSCEN--GYQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLL 69

Query: 65  DEHNQHSNLECSNRSSMMKEVPVVVV--------------------SSENVPTR------ 124
           DEHNQH+N E SN      +V +++                       + VP        
Sbjct: 70  DEHNQHTNFERSNEWQQRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSEN 129

Query: 125 ----INKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
               INKCL+EGAEMFMLKPLKQSDVVKLKCQ MN
Sbjct: 130 VPTRINKCLEEGAEMFMLKPLKQSDVVKLKCQFMN 162

[Close]

BLAST of Cla007300 vs. NCBI nr
Match: gi|1021576127|ref|XP_016179276.1| (PREDICTED: two-component response regulator ARR17-like [Arachis ipaensis])

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-38
Identity = 92/152 (60.53%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 3   APSSSSSIKWSSEN---ENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALE 62
           A + SSS  WSS N   EN + PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE
Sbjct: 2   ASTGSSSSSWSSSNWVMENAAAPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALE 61

Query: 63  FLGLLDEHNQ----------------------HSNLECSNRSSMMKEVPVVVVSSENVPT 122
           FLGL D                          +  L+    SS MKEVPVV++SSEN+PT
Sbjct: 62  FLGLTDSEQNAMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSENIPT 121

Query: 123 RINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
           RIN+CL+EGA+MFMLKPLKQSDV KL CQLMN
Sbjct: 122 RINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153

[Close]

BLAST of Cla007300 vs. NCBI nr
Match: gi|1012256750|ref|XP_015945037.1| (PREDICTED: two-component response regulator ARR17-like [Arachis duranensis])

HSP 1 Score: 166.8 bits (421), Expect = 2.5e-38
Identity = 92/152 (60.53%), Postives = 104/152 (68.42%), Query Frame = 1


Query: 3   APSSSSSIKWSSEN---ENGSQPHVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALE 62
           A + SSS  WSS N   EN + PHVLAVDDNL+DRKLVEKLL+NSSCKVTTAENG  ALE
Sbjct: 2   ASTGSSSSSWSSSNWVMENAATPHVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALE 61

Query: 63  FLGLLDEHNQ----------------------HSNLECSNRSSMMKEVPVVVVSSENVPT 122
           FLGL D                          +  L+    SS MKEVPVV++SSEN+PT
Sbjct: 62  FLGLTDSEQNAMNGRSKVNLVITDYCMPGMTGYELLKKIKESSSMKEVPVVIMSSENIPT 121

Query: 123 RINKCLKEGAEMFMLKPLKQSDVVKLKCQLMN 130
           RIN+CL+EGA+MFMLKPLKQSDV KL CQLMN
Sbjct: 122 RINQCLEEGAQMFMLKPLKQSDVKKLTCQLMN 153

The following BLAST results are available for this feature:

BLAST of Cla007300 vs. Swiss-Prot


Match Name	E-value	Identity	Description
ORR9_ORYSJ	3.3e-22	42.86	Two-component response regulator ORR9 OS=Oryza sativa subsp. japonica GN=RR9 PE=...	[more]
ORR9_ORYSI	3.3e-22	42.86	Two-component response regulator ORR9 OS=Oryza sativa subsp. indica GN=RR9 PE=2 ...	[more]
ORR10_ORYSI	3.3e-22	42.86	Two-component response regulator ORR10 OS=Oryza sativa subsp. indica GN=RR10 PE=...	[more]
ORR10_ORYSJ	3.3e-22	42.86	Two-component response regulator ORR10 OS=Oryza sativa subsp. japonica GN=RR10 P...	[more]
ARR15_ARATH	7.4e-22	42.86	Two-component response regulator ARR15 OS=Arabidopsis thaliana GN=ARR15 PE=1 SV=...	[more]

BLAST of Cla007300 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMB0_CUCSA	6.1e-39	61.94	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G223020 PE=4 SV=1	[more]
W9SAW3_9ROSA	6.3e-36	59.87	Two-component response regulator OS=Morus notabilis GN=L484_011250 PE=4 SV=1	[more]
M5XFZ6_PRUPE	2.4e-35	57.14	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa017797mg PE=4 SV=1	[more]
B9IQ64_POPTR	4.1e-35	62.12	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0019s08690g PE=4 SV=1	[more]
A0A151SG03_CAJCA	4.1e-35	59.60	Two-component response regulator ARR17 OS=Cajanus cajan GN=KK1_024334 PE=4 SV=1	[more]

BLAST of Cla007300 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|657955804\|ref\|XP_008369376.1\|	3.0e-39	73.02	PREDICTED: two-component response regulator ARR17 isoform X2 [Malus domestica]	[more]
gi\|778701578\|ref\|XP_011655050.1\|	6.7e-39	65.13	PREDICTED: two-component response regulator ARR17 isoform X2 [Cucumis sativus]	[more]
gi\|449457395\|ref\|XP_004146434.1\|	8.7e-39	61.94	PREDICTED: two-component response regulator ARR17 isoform X1 [Cucumis sativus]	[more]
gi\|1021576127\|ref\|XP_016179276.1\|	2.5e-38	60.53	PREDICTED: two-component response regulator ARR17-like [Arachis ipaensis]	[more]
gi\|1012256750\|ref\|XP_015945037.1\|	2.5e-38	60.53	PREDICTED: two-component response regulator ARR17-like [Arachis duranensis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001789	Sig_transdc_resp-reg_receiver
IPR011006	CheY-like_superfamily

Vocabulary: **Biological Process**
Term	Definition
GO:0000160	phosphorelay signal transduction system

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0016310	phosphorylation
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0005622	intracellular
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016301	kinase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla007300	Cla007300.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001789	Signal transduction response regulator, receiver domain	PROFILE	PS50110	RESPONSE_REGULATORY	coord: 23..128 score: 17
IPR011006	CheY-like superfamily	unknown	SSF52172	CheY-like	coord: 21..123 score: 2.99
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 19..61 score: 3.0E-10coord: 81..122 score: 6.
None	No IPR available	PANTHER	PTHR26402	RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM	coord: 22..129 score: 7.5
None	No IPR available	PANTHER	PTHR26402:SF521	TWO-COMPONENT RESPONSE REGULATOR ARR16-RELATED	coord: 22..129 score: 7.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla007300	Cla97C07G133530	Watermelon (97103) v2	wmwmbB167
Cla007300	Csa5G223020	Cucumber (Chinese Long) v2	cuwmB387
Cla007300	ClCG07G005170	Watermelon (Charleston Gray)	wcgwmB365
Cla007300	CSPI05G11620	Wild cucumber (PI 183967)	cpiwmB395
Cla007300	Cucsa.143870	Cucumber (Gy14) v1	cgywmB253
Cla007300	CmaCh04G001000	Cucurbita maxima (Rimu)	cmawmB691
Cla007300	CmoCh04G000990	Cucurbita moschata (Rifu)	cmowmB685
Cla007300	Lsi04G010150	Bottle gourd (USVL1VR-Ls)	lsiwmB306
Cla007300	Cp4.1LG01g05900	Cucurbita pepo (Zucchini)	cpewmB418
Cla007300	CsGy5G008880	Cucumber (Gy14) v2	cgybwmB359
Cla007300	Carg24469	Silver-seed gourd	carwmB0910
Cla007300	CsaV3_5G011030	Cucumber (Chinese Long) v3	cucwmB410
Cla007300	Bhi07G000410	Wax gourd	wgowmB548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla007300	Cucurbita pepo (Zucchini)	cpewmB177
Cla007300	Cucurbita pepo (Zucchini)	cpewmB417
Cla007300	Bottle gourd (USVL1VR-Ls)	lsiwmB253
Cla007300	Melon (DHL92) v3.6.1	medwmB053
Cla007300	Silver-seed gourd	carwmB0254
Cla007300	Silver-seed gourd	carwmB0667
Cla007300	Watermelon (97103) v2	wmwmbB152
Cla007300	Cucurbita maxima (Rimu)	cmawmB690
Cla007300	Cucurbita moschata (Rifu)	cmowmB684
Cla007300	Melon (DHL92) v3.5.1	mewmB056
Cla007300	Watermelon (Charleston Gray)	wcgwmB094