Cucsa.077150 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.077150
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Thioredoxin
Location	scaffold00791 : 278905 .. 280097 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCTTCCACTCCACACCTCAATATCCTCTTCTTCCATTTTTTATTCCAATTTCCCCCAAAAAAATTCACCAAAATACCATTAACAAATTAAAAAAAAATTCCCCCAAACATCTTAATTTCCTCCATACAATTACATAATAAAAAAACAAAGACATCCCCCTGTTTATGCCCTAGTTTTATCCATCCCCAAAATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGGTAAGTCTTTCCATCCATTCATTTATGACTTGTTCTTACTTTCTTTGGGTTTATGGGGTTTGTGGGGTTTGTGGGGTTTGATGGGATTTTGTTGTTTGTTAGTTCAGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGGTTTGATTTTCAAGAATCCCCTCTTATCCAATTTCACCATATACCCTTTCTTCCAATCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTTTTCTTGTATATGTATATCATCTTGTGTAGAATTGGGAAAACTTTTTGTCCATCTCTTCTTTAATTGTTTCTGTTGTAACGATGATTTTCTTTTTCTACTTTGTGTGTTTCACTCATTAGTGTTCCAATTGTTCATTCTCAGACTCAAAAAATTAAAAATTTGAGAAGAATGAATGTGAAGCATGGTAGATTAAAGGTTCCGAAATATGAATTTTAGGGTTTGGAGGGGAGTAATGGAAGGAGTCAGACCGAATAAGTAGTTGAGAAATGAGTA

mRNA sequence

ATCTTCCACTCCACACCTCAATATCCTCTTCTTCCATTTTTTATTCCAATTTCCCCCAAAAAAATTCACCAAAATACCATTAACAAATTAAAAAAAAATTCCCCCAAACATCTTAATTTCCTCCATACAATTACATAATAAAAAAACAAAGACATCCCCCTGTTTATGCCCTAGTTTTATCCATCCCCAAAATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGGTTTGATTTTCAAGAATCCCCTCTTATCCAATTTCACCATATACCCTTTCTTCCAAtctccttcttcttcttcttcttcttcttcttcttctttttcttGTATATGTATATCATCTTGTGTAGAATTGGGAAAACTTTTTGTCCATCTCTTCTTTAATTGTTTCTGTTGTAACGATGATTTTCTTTTTCTACTTTGTGTGTTTCACTCATTAGTGTTCCAATTGTTCATTCTCAGACTCAAAAAATTAAAAATTTGAGAAGAATGAATGTGAAGCATGGTAGATTAAAGGTTCCGAAATATGAATTTTAGGGTTTGGAGGGGAGTAATGGAAGGAGTCAGACCGAATAAGTAGTTGAGAAATGAGTA

Coding sequence (CDS)

ATGGCACTCGACAACTGTATACAACTGAGCACCGCCGCCACCATGTGCGCCGCCGCTTCCATACCCAAATCTCACTATTTCTCTTCAACCACAAATTACCCTCAAAAAACATCCTTCTCCACCCTCTCCCTTCAACGCCTTAACAAATCTCCCACGCCCACTTTCAGAAAACCCTTCTCCCTCACGTGCCAAGCCCGTGGAGCCGTCGACGACGTGAAAGAAGTAACAGAATCGAGTTGGAATAATTTGGTGGTGGAGAATCAAAAGGCTGTTTTGGTTGAATTTTGGGCACCATGGTGTGGACCTTGTAAGATAATTGAGCCAGTGATTAAGGAATTGGCAGCAGAATATGCTGGGAAGATTGTGTGTTTGAAGCTTAATACGGATCTCAGTCCAAATGTGGCTTCTAAATATGGGATTAGAAGTATTCCTACGGTTCTGTTTTTTAAGAATGGAGAGAAGAGAGAAAGTGTTATTGGGGCTGTGCCTAAATCTACTTTGACTGCCTCCATTGATAAGTATATTGAGGTTTGA

Protein sequence

MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV*

Homology

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BLAST of Cucsa.077150 vs. Swiss-Prot
Match: TRXM_SPIOL (Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 185.7 bits (470), Expect = 4.6e-46
Identity = 98/181 (54.14%), Postives = 128/181 (70.72%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYF--SSTTNYPQ----KTSFSTLSLQRLNKSPTPT 60
           MA++NC+QLST+A++   A     H+   SS  N P     K SF  LS    + SP   
Sbjct: 1   MAIENCLQLSTSASVGTVAVKSHVHHLQPSSKVNVPTFRGLKRSFPALSSSVSSSSPRQ- 60

Query: 61  FRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELA 120
           FR   S+ C+A  AV +V++V +SSW   V+E++  V+V+FWAPWCGPCK+I PVI ELA
Sbjct: 61  FRYS-SVVCKASEAVKEVQDVNDSSWKEFVLESEVPVMVDFWAPWCGPCKLIAPVIDELA 120

Query: 121 AEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKY 176
            EY+GKI   KLNTD +P +A++Y IRSIPTVLFFKNGE++ES+IGAVPKSTLT SI+KY
Sbjct: 121 KEYSGKIAVYKLNTDEAPGIATQYNIRSIPTVLFFKNGERKESIIGAVPKSTLTDSIEKY 179

[Close]

BLAST of Cucsa.077150 vs. Swiss-Prot
Match: TRXM_MAIZE (Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 3.4e-41
Identity = 92/175 (52.57%), Postives = 114/175 (65.14%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MA++ C +    A    A +  K          P K + + LS+ R+        R+P  
Sbjct: 1   MAMETCFR----AWALHAPAGSKDRLLVGNLVLPSKRALAPLSVGRV------ATRRPRH 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           + CQ++ AVD+V    E +W+ LV+  +  VLVEFWAPWCGPC++I PVI ELA +YAGK
Sbjct: 61  V-CQSKNAVDEVVVADEKNWDGLVMACETPVLVEFWAPWCGPCRMIAPVIDELAKDYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
           I C K+NTD SPNVAS YGIRSIPTVL FK GEK+ESVIGAVPKSTLT  IDKYI
Sbjct: 121 ITCCKVNTDDSPNVASTYGIRSIPTVLIFKGGEKKESVIGAVPKSTLTTLIDKYI 164

[Close]

BLAST of Cucsa.077150 vs. Swiss-Prot
Match: TRXM_PEA (Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 4.9e-40
Identity = 75/111 (67.57%), Postives = 95/111 (85.59%), Query Frame = 1


Query: 65  ARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCL 124
           AR AV++V+ V +SSW+ LV+ ++  VLV+FWAPWCGPC++I P+I ELA EYAGKI C 
Sbjct: 62  AREAVNEVQVVNDSSWDELVIGSETPVLVDFWAPWCGPCRMIAPIIDELAKEYAGKIKCY 121

Query: 125 KLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
           KLNTD SPN A+KYGIRSIPTVLFFKNGE+++SVIGAVPK+TL+  ++KYI
Sbjct: 122 KLNTDESPNTATKYGIRSIPTVLFFKNGERKDSVIGAVPKATLSEKVEKYI 172

[Close]

BLAST of Cucsa.077150 vs. Swiss-Prot
Match: TRXM5_ORYSJ (Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.1e-39
Identity = 78/136 (57.35%), Postives = 97/136 (71.32%), Query Frame = 1


Query: 40  STLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPW 99
           S+ S  RL+ +     R      CQ    VD+V    E +W+++V+ ++  VLVEFWAPW
Sbjct: 35  SSQSKPRLSVASPSPLRPASRFACQCSNVVDEVVVADEKNWDSMVLGSEAPVLVEFWAPW 94

Query: 100 CGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVI 159
           CGPC++I PVI ELA EY GKI C K+NTD SPN+A+ YGIRSIPTVL FKNGEK+ESVI
Sbjct: 95  CGPCRMIAPVIDELAKEYVGKIKCCKVNTDDSPNIATNYGIRSIPTVLMFKNGEKKESVI 154

Query: 160 GAVPKSTLTASIDKYI 176
           GAVPK+TL   IDKY+
Sbjct: 155 GAVPKTTLATIIDKYV 170

[Close]

BLAST of Cucsa.077150 vs. Swiss-Prot
Match: TRXM_WHEAT (Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.4e-39
Identity = 76/127 (59.84%), Postives = 93/127 (73.23%), Query Frame = 1


Query: 49  KSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEP 108
           KS     R+P    C+ +  VD+V    E +W+N+V+  +  VLVEFWAPWCGPC++I P
Sbjct: 47  KSALVAARRPSRFVCKCKNVVDEVIVADEKNWDNMVIACESPVLVEFWAPWCGPCRMIAP 106

Query: 109 VIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLT 168
           VI ELA +Y GKI C K+NTD  PN+AS YGIRSIPTVL FK+GEK+ESVIGAVPK+TL 
Sbjct: 107 VIDELAKDYVGKIKCCKVNTDDCPNIASTYGIRSIPTVLMFKDGEKKESVIGAVPKTTLC 166

Query: 169 ASIDKYI 176
             IDKYI
Sbjct: 167 TIIDKYI 173

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BLAST of Cucsa.077150 vs. TrEMBL
Match: A0A0A0KIC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G343710 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 9.7e-96
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV 178
           IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV
Sbjct: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV 177

[Close]

BLAST of Cucsa.077150 vs. TrEMBL
Match: A0A061FPW8_THECC (Thioredoxin M-type 4 OS=Theobroma cacao GN=TCM_035372 PE=4 SV=1)

HSP 1 Score: 200.3 bits (508), Expect = 2.0e-48
Identity = 104/185 (56.22%), Postives = 133/185 (71.89%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSST--TNYPQKTSFSTLSLQRLNKSPTPTFRKP 60
           MAL+NC QLS+A T  A+  +   H+FSS    + P    F+  +L   + S + +    
Sbjct: 1   MALENCFQLSSACTTRASV-LQSYHHFSSVEKVHLPTFRGFNKPNLSFTSSSSSSSLAHS 60

Query: 61  FS-------LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIK 120
           F+       L C+AR AVD+V  VTESSW  LVV ++  VLVEFWAPWCGPC++IEPVI 
Sbjct: 61  FTRRSQKSRLICKAREAVDEVAVVTESSWGELVVGSETPVLVEFWAPWCGPCRMIEPVIA 120

Query: 121 ELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASI 177
           ELA EYAGKI C KLNTD SPN+A+++GIRSIPT+LFFK+GEK+ES+IGAVPKSTL A+I
Sbjct: 121 ELAKEYAGKIACYKLNTDDSPNIATEFGIRSIPTMLFFKDGEKKESIIGAVPKSTLAATI 180

[Close]

BLAST of Cucsa.077150 vs. TrEMBL
Match: E0CQM3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15310 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 9.9e-48
Identity = 106/187 (56.68%), Postives = 138/187 (73.80%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHY-FSSTTNY---------PQKTSFSTLSLQRLNKS 60
           MAL+NC Q+ST +  CA A + +SH+ FS+             P   SFS+ S   L+ S
Sbjct: 1   MALENCFQVSTVS--CARAGVLQSHHPFSAKEKLNLPTCKGVKPSILSFSS-SPSSLDYS 60

Query: 61  PTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVI 120
                RK   + C+AR AVD+V+ VT+SSW+N+V+ ++  VLVEFWAPWCGPC++I PVI
Sbjct: 61  FHRICRKS-RIVCKAREAVDEVQVVTDSSWSNVVIASENPVLVEFWAPWCGPCRMIAPVI 120

Query: 121 KELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTAS 178
            ELA EYAGKIVC K+NTD  PN+A++YGIRSIPTVLFFKNGE++ESVIGAVPKSTLTA+
Sbjct: 121 DELAKEYAGKIVCCKVNTDDCPNIATQYGIRSIPTVLFFKNGERKESVIGAVPKSTLTAT 180

[Close]

BLAST of Cucsa.077150 vs. TrEMBL
Match: A0A151TS81_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_009116 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 1.3e-47
Identity = 100/182 (54.95%), Postives = 130/182 (71.43%), Query Frame = 1


Query: 1   MALDNCIQLSTAAT---MCAAASIPKSH---YFSSTTNYPQKTSFSTLSLQRLNKSPTPT 60
           MA++NC++L+T AT    C +   P S     F + T + +    S +S      S   T
Sbjct: 1   MAMENCLRLTTVATTTPQCLSPFFPTSREKLVFPTQTGFKKSMLNSKVSYPSSLYSTGAT 60

Query: 61  FRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELA 120
           ++K     C+AR AV++VK V +SSWNNLV+ +   VLVEFWAPWCGPC++I PVI ELA
Sbjct: 61  YKKS-RFVCKAREAVNEVKVVNDSSWNNLVIASDTPVLVEFWAPWCGPCRMIAPVIDELA 120

Query: 121 AEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKY 177
            EYAGKI C KLNTD SPN A++YGIRSIPTVLFFKNGEK+ES+IGAVPKSTL+A+++KY
Sbjct: 121 KEYAGKIACYKLNTDDSPNTATQYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSATVEKY 180

[Close]

BLAST of Cucsa.077150 vs. TrEMBL
Match: I3SJS4_LOTJA (Uncharacterized protein OS=Lotus japonicus PE=2 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 1.7e-47
Identity = 100/184 (54.35%), Postives = 131/184 (71.20%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTN--YPQKTSFSTLSLQRLNKSPTPTF--- 60
           MA+++C+Q++T  T+    S+   H FS+     +P    F     +    S    +   
Sbjct: 1   MAMESCLQVTTVGTVARPQSL---HPFSAREKVVFPTYRGFKKCFSKSATSSNPSLYSAA 60

Query: 61  --RKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKEL 120
              + FS+ C AR AV++VK VTESSWN+LV+ ++  VLV+FWAPWCGPC++I P+I EL
Sbjct: 61  GTNRKFSVICNAREAVNEVKVVTESSWNDLVIASEIPVLVDFWAPWCGPCRMIAPLIDEL 120

Query: 121 AAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDK 178
           A EYAGKI C KLNTD SPN+A++YGIRSIPTVLFFKNGEK+ESVIGAVPKSTLTAS++K
Sbjct: 121 AKEYAGKIACYKLNTDDSPNIATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLTASLEK 180

[Close]

BLAST of Cucsa.077150 vs. TAIR10
Match: AT4G03520.1 (AT4G03520.1 Thioredoxin superfamily protein)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-35
Identity = 64/140 (45.71%), Postives = 101/140 (72.14%), Query Frame = 1


Query: 36  KTSFSTLSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEF 95
           + S S  SL  +++      R+  ++ C+A+    D++ V +S+W++LV++    V+V+F
Sbjct: 48  RLSLSPASLTSIHQPRVSRLRR--AVVCEAQETTTDIQVVNDSTWDSLVLKATGPVVVDF 107

Query: 96  WAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKR 155
           WAPWCGPCK+I+P++ +LA  Y GKI   KLNTD SPN   +YG+RSIPT++ F  GEK+
Sbjct: 108 WAPWCGPCKMIDPLVNDLAQHYTGKIKFYKLNTDESPNTPGQYGVRSIPTIMIFVGGEKK 167

Query: 156 ESVIGAVPKSTLTASIDKYI 176
           +++IGAVPK+TLT+S+DK++
Sbjct: 168 DTIIGAVPKTTLTSSLDKFL 185

[Close]

BLAST of Cucsa.077150 vs. TAIR10
Match: AT3G15360.1 (AT3G15360.1 thioredoxin M-type 4)

HSP 1 Score: 136.7 bits (343), Expect = 1.4e-32
Identity = 58/118 (49.15%), Postives = 88/118 (74.58%), Query Frame = 1


Query: 61  LTCQAR---GAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEY 120
           + C+A+    A  +V  +++S W   V+E+   VLVEFWAPWCGPC++I P++ +LA ++
Sbjct: 74  IACEAQDTTAAAVEVPNLSDSEWQTKVLESDVPVLVEFWAPWCGPCRMIHPIVDQLAKDF 133

Query: 121 AGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
           AGK    K+NTD SPN A++YGIRS+PTV+ FK GEK++S+IGAVP+ TL  +I++++
Sbjct: 134 AGKFKFYKINTDESPNTANRYGIRSVPTVIIFKGGEKKDSIIGAVPRETLEKTIERFL 191

[Close]

BLAST of Cucsa.077150 vs. TAIR10
Match: AT1G03680.1 (AT1G03680.1 thioredoxin M-type 1)

HSP 1 Score: 136.3 bits (342), Expect = 1.8e-32
Identity = 63/143 (44.06%), Postives = 98/143 (68.53%), Query Frame = 1


Query: 34  PQKTSFST-LSLQRLNKSPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVL 93
           P+ +   T +SL  L+K+   + R    + C+A+     +  V +S+W++LV++  + V 
Sbjct: 38  PESSGLRTRVSLSSLSKNSRVS-RLRRGVICEAQDTATGIPVVNDSTWDSLVLKADEPVF 97

Query: 94  VEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNG 153
           V+FWAPWCGPCK+I+P++ ELA +YAG+    KLNTD SP    +YG+RSIPT++ F NG
Sbjct: 98  VDFWAPWCGPCKMIDPIVNELAQKYAGQFKFYKLNTDESPATPGQYGVRSIPTIMIFVNG 157

Query: 154 EKRESVIGAVPKSTLTASIDKYI 176
           EK++++IGAV K TL  SI+K++
Sbjct: 158 EKKDTIIGAVSKDTLATSINKFL 179

[Close]

BLAST of Cucsa.077150 vs. TAIR10
Match: AT2G15570.2 (AT2G15570.2 Thioredoxin superfamily protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25
Identity = 61/157 (38.85%), Postives = 94/157 (59.87%), Query Frame = 1


Query: 24  SHYFSSTTNYPQKTSFSTLSLQ---RLNKSPTPTFRKPFSLTC--QARGAVDDVKEVTES 83
           + + SS +     TSFS  SL+   R +   +   R   S  C   +R A     EVT+ 
Sbjct: 20  ARHISSPSRLFPVTSFSPRSLRFSDRRSLLSSSASRLRLSPLCVRDSRAAA----EVTQR 79

Query: 84  SWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGKIVCLKLNTDLSPNVASKY 143
           SW + V++++  VLVEF+  WCGPC+++  +I E+A +YAGK+ C  LN D    VA +Y
Sbjct: 80  SWEDSVLKSETPVLVEFYTSWCGPCRMVHRIIDEIAGDYAGKLNCYLLNADNDLPVAEEY 139

Query: 144 GIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 176
            I+++P VL FKNGEKRES++G +PK    ++I++ +
Sbjct: 140 EIKAVPVVLLFKNGEKRESIMGTMPKEFYISAIERVL 172

[Close]

BLAST of Cucsa.077150 vs. TAIR10
Match: AT1G43560.1 (AT1G43560.1 thioredoxin Y2)

HSP 1 Score: 84.7 bits (208), Expect = 6.2e-17
Identity = 41/122 (33.61%), Postives = 76/122 (62.30%), Query Frame = 1


Query: 56  RKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAA 115
           + P S T  A   V   K+ T +S+++L+  + K VLV+F+A WCGPC+++ P++ E++ 
Sbjct: 44  QSPSSSTRFAPLTVRAAKKQTFNSFDDLLQNSDKPVLVDFYATWCGPCQLMVPILNEVSE 103

Query: 116 EYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYI 175
                I  +K++T+  P++A+KY I ++PT + FK+G+  +   GA+P + L   I+  +
Sbjct: 104 TLKDIIAVVKIDTEKYPSLANKYQIEALPTFILFKDGKLWDRFEGALPANQLVERIENSL 163

Query: 176 EV 178
           +V
Sbjct: 164 QV 165

[Close]

BLAST of Cucsa.077150 vs. NCBI nr
Match: gi|449466020|ref|XP_004150725.1| (PREDICTED: thioredoxin M-type, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 357.5 bits (916), Expect = 1.4e-95
Identity = 177/177 (100.00%), Postives = 177/177 (100.00%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60
           MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS
Sbjct: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTSFSTLSLQRLNKSPTPTFRKPFS 60

Query: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120
           LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK
Sbjct: 61  LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELAAEYAGK 120

Query: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV 178
           IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV
Sbjct: 121 IVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKYIEV 177

[Close]

BLAST of Cucsa.077150 vs. NCBI nr
Match: gi|470108568|ref|XP_004290587.1| (PREDICTED: thioredoxin M-type, chloroplastic-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 202.2 bits (513), Expect = 7.5e-49
Identity = 106/183 (57.92%), Postives = 129/183 (70.49%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSS------TTNYPQKTSFSTLSLQRLNKSPTPT 60
           MAL+NC+QLST  T    A+    H FSS      T N  +K+     S       P  T
Sbjct: 1   MALENCLQLSTVCTTRVGAA-QCYHPFSSEKLVVPTCNGLRKSGLKFSSSSSFVARPKST 60

Query: 61  FRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIKELA 120
             +     C+AR AVD V+ VT+SSWNNLV+ ++  VLVEFWAPWCGPC++I PVI ELA
Sbjct: 61  RLQKSGFVCKAREAVDQVQVVTDSSWNNLVIASENPVLVEFWAPWCGPCRMIAPVIDELA 120

Query: 121 AEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASIDKY 178
            EYAGKI C KLNTD SPN A++YGIRSIPTVLFFKNGEK+ESVIGAVPKSTL+A+I+KY
Sbjct: 121 KEYAGKISCFKLNTDDSPNTATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSATIEKY 180

[Close]

BLAST of Cucsa.077150 vs. NCBI nr
Match: gi|590600036|ref|XP_007019349.1| (Thioredoxin M-type 4 [Theobroma cacao])

HSP 1 Score: 200.3 bits (508), Expect = 2.9e-48
Identity = 104/185 (56.22%), Postives = 133/185 (71.89%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSST--TNYPQKTSFSTLSLQRLNKSPTPTFRKP 60
           MAL+NC QLS+A T  A+  +   H+FSS    + P    F+  +L   + S + +    
Sbjct: 1   MALENCFQLSSACTTRASV-LQSYHHFSSVEKVHLPTFRGFNKPNLSFTSSSSSSSLAHS 60

Query: 61  FS-------LTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPVIK 120
           F+       L C+AR AVD+V  VTESSW  LVV ++  VLVEFWAPWCGPC++IEPVI 
Sbjct: 61  FTRRSQKSRLICKAREAVDEVAVVTESSWGELVVGSETPVLVEFWAPWCGPCRMIEPVIA 120

Query: 121 ELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTASI 177
           ELA EYAGKI C KLNTD SPN+A+++GIRSIPT+LFFK+GEK+ES+IGAVPKSTL A+I
Sbjct: 121 ELAKEYAGKIACYKLNTDDSPNIATEFGIRSIPTMLFFKDGEKKESIIGAVPKSTLAATI 180

[Close]

BLAST of Cucsa.077150 vs. NCBI nr
Match: gi|694362443|ref|XP_009360706.1| (PREDICTED: thioredoxin M-type, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 198.7 bits (504), Expect = 8.3e-48
Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKTS-----------FSTLSLQRLNK 60
           MAL+NC+QLST  T    A+    H FSST  +   TS            S+ S  R  K
Sbjct: 1   MALENCLQLSTVCTTRVGAAA--HHPFSSTDKFVVPTSNGLKKSALKFSSSSSSFSRSGK 60

Query: 61  SPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPV 120
           S    F       C+AR AV++V+ V +SSWN LV+ ++  VLVEFWAPWCGPC++I PV
Sbjct: 61  SQKSRF------ICKAREAVNEVQVVNDSSWNTLVIASENPVLVEFWAPWCGPCRMIAPV 120

Query: 121 IKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTA 178
           I ELA EYAGKI C KLNTD SPN A++YGIRSIPTVLFFKNGEK+ESVIGAVPKSTL+A
Sbjct: 121 IDELAKEYAGKISCFKLNTDESPNTATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSA 180

[Close]

BLAST of Cucsa.077150 vs. NCBI nr
Match: gi|657979511|ref|XP_008381719.1| (PREDICTED: thioredoxin M-type, chloroplastic-like [Malus domestica])

HSP 1 Score: 198.4 bits (503), Expect = 1.1e-47
Identity = 106/188 (56.38%), Postives = 130/188 (69.15%), Query Frame = 1


Query: 1   MALDNCIQLSTAATMCAAASIPKSHYFSSTTNYPQKT-----------SFSTLSLQRLNK 60
           MAL+NC+QLST  T    A+    H FSST  +   T           S S+ S  R  K
Sbjct: 1   MALENCLQLSTVCTTRVGAAA--HHPFSSTDKFVVPTXNGLKKSALKFSSSSSSFPRSGK 60

Query: 61  SPTPTFRKPFSLTCQARGAVDDVKEVTESSWNNLVVENQKAVLVEFWAPWCGPCKIIEPV 120
           S    F       C+AR AV++V+ V +SSWN LV+ ++  VLVEFWAPWCGPC++I PV
Sbjct: 61  SQKSRF------ICKAREAVNEVQVVNDSSWNTLVIASENPVLVEFWAPWCGPCRMIAPV 120

Query: 121 IKELAAEYAGKIVCLKLNTDLSPNVASKYGIRSIPTVLFFKNGEKRESVIGAVPKSTLTA 178
           I ELA EYAGKI C KLNTD SPN A++YGIRSIPTVLFFKNGEK+ESVIGAVPKSTL+A
Sbjct: 121 IDELAKEYAGKISCFKLNTDESPNTATQYGIRSIPTVLFFKNGEKKESVIGAVPKSTLSA 180

The following BLAST results are available for this feature:

BLAST of Cucsa.077150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TRXM_SPIOL	4.6e-46	54.14	Thioredoxin M-type, chloroplastic OS=Spinacia oleracea PE=1 SV=2	[more]
TRXM_MAIZE	3.4e-41	52.57	Thioredoxin M-type, chloroplastic OS=Zea mays GN=TRM1 PE=2 SV=1	[more]
TRXM_PEA	4.9e-40	67.57	Thioredoxin M-type, chloroplastic OS=Pisum sativum PE=2 SV=1	[more]
TRXM5_ORYSJ	1.1e-39	57.35	Thioredoxin M5, chloroplastic OS=Oryza sativa subsp. japonica GN=TRXM PE=2 SV=1	[more]
TRXM_WHEAT	2.4e-39	59.84	Thioredoxin M-type, chloroplastic OS=Triticum aestivum PE=2 SV=1	[more]

BLAST of Cucsa.077150 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KIC1_CUCSA	9.7e-96	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_6G343710 PE=4 SV=1	[more]
A0A061FPW8_THECC	2.0e-48	56.22	Thioredoxin M-type 4 OS=Theobroma cacao GN=TCM_035372 PE=4 SV=1	[more]
E0CQM3_VITVI	9.9e-48	56.68	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_18s0001g15310 PE=4 SV=...	[more]
A0A151TS81_CAJCA	1.3e-47	54.95	Uncharacterized protein OS=Cajanus cajan GN=KK1_009116 PE=4 SV=1	[more]
I3SJS4_LOTJA	1.7e-47	54.35	Uncharacterized protein OS=Lotus japonicus PE=2 SV=1	[more]

BLAST of Cucsa.077150 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G03520.1	1.3e-35	45.71	Thioredoxin superfamily protein	[more]
AT3G15360.1	1.4e-32	49.15	thioredoxin M-type 4	[more]
AT1G03680.1	1.8e-32	44.06	thioredoxin M-type 1	[more]
AT2G15570.2	3.6e-25	38.85	Thioredoxin superfamily protein	[more]
AT1G43560.1	6.2e-17	33.61	thioredoxin Y2	[more]

BLAST of Cucsa.077150 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449466020\|ref\|XP_004150725.1\|	1.4e-95	100.00	PREDICTED: thioredoxin M-type, chloroplastic-like [Cucumis sativus]	[more]
gi\|470108568\|ref\|XP_004290587.1\|	7.5e-49	57.92	PREDICTED: thioredoxin M-type, chloroplastic-like [Fragaria vesca subsp. vesca]	[more]
gi\|590600036\|ref\|XP_007019349.1\|	2.9e-48	56.22	Thioredoxin M-type 4 [Theobroma cacao]	[more]
gi\|694362443\|ref\|XP_009360706.1\|	8.3e-48	56.38	PREDICTED: thioredoxin M-type, chloroplastic-like [Pyrus x bretschneideri]	[more]
gi\|657979511\|ref\|XP_008381719.1\|	1.1e-47	56.38	PREDICTED: thioredoxin M-type, chloroplastic-like [Malus domestica]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005746	Thioredoxin
IPR012336	Thioredoxin-like_fold
IPR013766	Thioredoxin_domain
IPR017937	Thioredoxin_CS

Vocabulary: **Biological Process**
Term	Definition
GO:0006662	glycerol ether metabolic process
GO:0045454	cell redox homeostasis

Vocabulary: **Molecular Function**
Term	Definition
GO:0015035	protein disulfide oxidoreductase activity

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006662	glycerol ether metabolic process
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005623	cell
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0015035	protein disulfide oxidoreductase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.077150.1	Cucsa.077150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005746	Thioredoxin	PANTHER	PTHR10438	THIOREDOXIN	coord: 2..176 score: 8.4
IPR005746	Thioredoxin	TIGRFAMs	TIGR01068	TIGR01068	coord: 76..173 score: 1.1
IPR012336	Thioredoxin-like fold	GENE3D	G3DSA:3.40.30.10		coord: 65..175 score: 1.4
IPR012336	Thioredoxin-like fold	unknown	SSF52833	Thioredoxin-like	coord: 60..175 score: 1.03
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 72..173 score: 2.2
IPR013766	Thioredoxin domain	PROFILE	PS51352	THIOREDOXIN_2	coord: 50..176 score: 14
IPR017937	Thioredoxin, conserved site	PROSITE	PS00194	THIOREDOXIN_1	coord: 92..110 scor
None	No IPR available	PRINTS	PR00421	THIOREDOXIN	coord: 91..99 score: 2.3E-9coord: 99..108 score: 2.3E-9coord: 139..150 score: 2.
None	No IPR available	PANTHER	PTHR10438:SF290	SUBFAMILY NOT NAMED	coord: 2..176 score: 8.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.077150	Cla013870	Watermelon (97103) v1	cgywmB082
Cucsa.077150	Csa6G343710	Cucumber (Chinese Long) v2	cgycuB074
Cucsa.077150	MELO3C008421	Melon (DHL92) v3.5.1	cgymeB079
Cucsa.077150	ClCG08G006360	Watermelon (Charleston Gray)	cgywcgB080
Cucsa.077150	CSPI06G18180	Wild cucumber (PI 183967)	cgycpiB077
Cucsa.077150	CmaCh15G006320	Cucurbita maxima (Rimu)	cgycmaB0130
Cucsa.077150	CmaCh04G024160	Cucurbita maxima (Rimu)	cgycmaB0131
Cucsa.077150	CmoCh04G025340	Cucurbita moschata (Rifu)	cgycmoB0128
Cucsa.077150	CmoCh15G006400	Cucurbita moschata (Rifu)	cgycmoB0127
Cucsa.077150	Lsi08G005140	Bottle gourd (USVL1VR-Ls)	cgylsiB079
Cucsa.077150	Cp4.1LG13g04310	Cucurbita pepo (Zucchini)	cgycpeB0127
Cucsa.077150	Cp4.1LG01g20890	Cucurbita pepo (Zucchini)	cgycpeB0128
Cucsa.077150	MELO3C008421.2	Melon (DHL92) v3.6.1	cgymedB078
Cucsa.077150	CsaV3_6G031060	Cucumber (Chinese Long) v3	cgycucB078
Cucsa.077150	Cla97C08G149150	Watermelon (97103) v2	cgywmbB076
Cucsa.077150	Bhi04G001429	Wax gourd	cgywgoB089
Cucsa.077150	Carg15765	Silver-seed gourd	carcgyB0070
Cucsa.077150	Carg01574	Silver-seed gourd	carcgyB0944

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.077150	Cucurbita pepo (Zucchini)	cgycpeB0129