Cucsa.031630 (gene) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.031630
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ribosome biogenesis ERB1
Location	scaffold00429 : 782910 .. 784750 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCACCGAATCCTAAACTCGAAAGCCCGAGTTGAGGTTTAACCAACTCAAAAGCGAGAGGAGACGAGAAAAAAAGATGCTTCTTTTGAAACTTGATCTTCTTCTACAACCCCGTCGATTCCTCTCCCTGTCTCTAGAACTACTGCGACAGCATCCTTAACGATTCTCTCACAGGTCTTTGGCGTTTTTGTTGTTAAGATCCTCTAATGGTTGTTGTTCAGGCTACCAAGCTCAGCCTTCCCAACCCTTCTCTCTCTTCCCCACAAATTTCTTCCCTTCTCTTTGAACCTCATTCTCTTTCTCTTGCTCTAATGCACTCAGATTCTTCTTTCTCCCTCTACCCTTCTTTTTCCCCTCTCTCACTTTCCTCTCTTCCTTCCCCTCAAGTGGTTGTGCCTTCTCCGTGTTCTTCTGCGGCTTTTGTTGCCCTTCAGAATTCTAATTCCAACTCCGATACTAAGGTTCTGTTTGTGGTCTCTGGCCCCCACAAGGGTGGCTCTCAGATTCTCCTTCGGTTTTATGTTTTGGAGGGTTCTAAATTGTTCAGGAGAGCTCCAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTCAATTTTAGACATGGGATTTCGGTTCGTTTAGCTGGGTCAGTCAATTTCTTCGCCATGTACTCTGTTTCGAGCATGAAGATTTGGGTTTTTGCGGTGAAGATGGTGGGAGACGGCGATGATGGGATAGGTTTGAAATTGATGAGATGTGCTGTGATTGATTGCTGCAAACCCATTTGGTCGCTTAACATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGGATTAGGGTTGTTAATTTGAGGCCCTTTGTGAGAGGGCGTGGTCGAAAAGTTAGGAATCTGAATGCAAATACCTCTTCTAATGCCAAGCGTGAAGTTCAGAAGTCATTTTTGCCTCATGTAGATGTTTGTGGAACTTCTGGTGGCAATGACTTGAACGGTGGTTCTTTAGTTGTTAGCAGCAATGGATTCAATTTACAAGCCAGTAGAAGTGAAGATGCTGGAAGCTTAGCTTGCAATGGATGCTTGGACGGGAAGTTGGACAAAATTTCTAGTTCTGGTAAGTTAAGAGAGTTTTATTACTTTAGTTTATTTGATTTATCTTTTTAGTTTTCACAGTAAGAGGGATACATTTAAATGTATATTATGCGTACATTTTATTTATATTGGTTGTGTCTCCTGTAATTTGGAACTTTTGATCATAATTTTAATCCTGGGGGCCTTCTTTTAATTGCCCAAGGTAGGTGTGAGCATAATTATAATACCATGCGTTTGCTGAAGTTTGAGGCGGCATGTTAAAAATTTCAAGAGTTTGGAGCAATCTTTATTCAAAGTGTATGTGATGTAGCATTATAGCTATGTAGTTTTTGGTCAATGTTGGGGTCTGTTATGAATTTGTTAGCTTGTCTTCTTTAATTCTGTTTTATAGAGCATTTTATTTAGAGCTGGCTGGTTAGTTAGTCATTACCCTTGACTGCTTTGGTTAGGATTTTAGGGAATTAGTTATTCCCCGTCAGAACCTTTAAATAGCTGCCATTAGGTTGCTAAAAAGGATCATTCAATAAAGAAGATGTTGGAGTACTCAATTGTCATTTGTATGCAACTGTATGCAACTGTATGCTATCAAGAATTATAATTTATAGGAGTGTTCAAGAAAGTTTGTTTTACTATAGATGGAGATGAGAGAAATCTATGCTGTTGTTTTTTAAGGAACAGGACGGACTCAAGAAGATTCTTTCTCAGACCAAAGCAGATTCTACATTTGTGGCCAGGCAAATTCTTGA

mRNA sequence

ATGAAACCACCGAATCCTAAACTCGAAAGCCCGAATCCTCTAATGGTTGTTGTTCAGGCTACCAAGCTCAGCCTTCCCAACCCTtctctctcttccccacaaatttcttcccttctctttgaacctcattctctttctcttgctctaatgcactcagattcttctttctccctctacccttctttttcccctctctcactttcctctcttccttcccctcAAGTGGTTGTGCCTTCTCCGTGTTCTTCTGCGGCTTTTGTTGCCCTTCAGAATTCTAATTCCAACTCCGATACTAAGGTTCTGTTTGTGGTCTCTGGCCCCCACAAGGGTGGCTCTCAGATTCTCCTTCGGTTTTATGTTTTGGAGGGTTCTAAATTGTTCAGGAGAGCTCCAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTCAATTTTAGACATGGGATTTCGGTTCGTTTAGCTGGGTCAGTCAATTTCTTCGCCATGTACTCTGTTTCGAGCATGAAGATTTGGGTTTTTGCGGTGAAGATGGTGGGAGACGGCGATGATGGGATAGGTTTGAAATTGATGAGATGTGCTGTGATTGATTGCTGCAAACCCATTTGGTCGCTTAACATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGGATTAGGGTTGTTAATTTGAGGCCCTTTGTGAGAGGGCGTGGTCGAAAAGTTAGGAATCTGAATGCAAATACCTCTTCTAATGCCAAGCGTGAAGTTCAGAAGTCATTTTTGCCTCATGTAGATGTTTGTGGAACTTCTGGTGGCAATGACTTGAACGGTGGTTCTTTAGTTGTTAGCAGCAATGGATTCAATTTACAAGCCAGTAGAAGTGAAGATGCTGGAAGCTTAGCTTGCAATGGATGCTTGGACGGGAAGTTGGACAAAATTTCTAGTTCTGGACGGACTCAAGAAGATTCTTTCTCAGAccaaagcagattctacatttgtggccaggcaaattcttga

Coding sequence (CDS)

ATGAAACCACCGAATCCTAAACTCGAAAGCCCGAATCCTCTAATGGTTGTTGTTCAGGCTACCAAGCTCAGCCTTCCCAACCCTTCTCTCTCTTCCCCACAAATTTCTTCCCTTCTCTTTGAACCTCATTCTCTTTCTCTTGCTCTAATGCACTCAGATTCTTCTTTCTCCCTCTACCCTTCTTTTTCCCCTCTCTCACTTTCCTCTCTTCCTTCCCCTCAAGTGGTTGTGCCTTCTCCGTGTTCTTCTGCGGCTTTTGTTGCCCTTCAGAATTCTAATTCCAACTCCGATACTAAGGTTCTGTTTGTGGTCTCTGGCCCCCACAAGGGTGGCTCTCAGATTCTCCTTCGGTTTTATGTTTTGGAGGGTTCTAAATTGTTCAGGAGAGCTCCAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTCAATTTTAGACATGGGATTTCGGTTCGTTTAGCTGGGTCAGTCAATTTCTTCGCCATGTACTCTGTTTCGAGCATGAAGATTTGGGTTTTTGCGGTGAAGATGGTGGGAGACGGCGATGATGGGATAGGTTTGAAATTGATGAGATGTGCTGTGATTGATTGCTGCAAACCCATTTGGTCGCTTAACATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGGATTAGGGTTGTTAATTTGAGGCCCTTTGTGAGAGGGCGTGGTCGAAAAGTTAGGAATCTGAATGCAAATACCTCTTCTAATGCCAAGCGTGAAGTTCAGAAGTCATTTTTGCCTCATGTAGATGTTTGTGGAACTTCTGGTGGCAATGACTTGAACGGTGGTTCTTTAGTTGTTAGCAGCAATGGATTCAATTTACAAGCCAGTAGAAGTGAAGATGCTGGAAGCTTAGCTTGCAATGGATGCTTGGACGGGAAGTTGGACAAAATTTCTAGTTCTGGACGGACTCAAGAAGATTCTTTCTCAGACCAAAGCAGATTCTACATTTGTGGCCAGGCAAATTCTTGA

Protein sequence

MKPPNPKLESPNPLMVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQVVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKISSSGRTQEDSFSDQSRFYICGQANS*

Homology

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BLAST of Cucsa.031630 vs. TrEMBL
Match: M5WXB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.1e-90
Identity = 181/303 (59.74%), Postives = 221/303 (72.94%), Query Frame = 1


Query: 14  LMVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSP 73
           LMVVVQA+KL LPNPSLSSP I+SLLFEPHSLSLALMHSDS+ SLYPS SPLSLSSLP P
Sbjct: 26  LMVVVQASKLRLPNPSLSSPNITSLLFEPHSLSLALMHSDSTLSLYPSISPLSLSSLPPP 85

Query: 74  QVVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVV 133
           Q ++  P SS+ F+ LQN N N +T+VLF+VSGP++GGSQ+LLRFY+L   K F RA VV
Sbjct: 86  QTLIAPPSSSSTFLLLQNPNPNPNTRVLFIVSGPYRGGSQVLLRFYILHKQKQFVRAQVV 145

Query: 134 CTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV----GDGDD 193
           CTQK+L+ D KLGVLV+  HG+S++LAGSVNFFAMYSVSS KIWVFAVK +     D +D
Sbjct: 146 CTQKELQFDQKLGVLVDAHHGVSIKLAGSVNFFAMYSVSSSKIWVFAVKSIDNDDNDDND 205

Query: 194 GIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTS 253
           G+ +KLMRCAVI+CCK +WS++ISFGFL+LGEDNG+RV NLR  V+GR RK + LN    
Sbjct: 206 GMVVKLMRCAVIECCKLVWSISISFGFLILGEDNGVRVFNLRQLVKGRVRKAKLLN---- 265

Query: 254 SNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGK 313
           S++K E +   LP+  V G    +DL          G      +      + CNG L GK
Sbjct: 266 SSSKTEGRNLCLPN-GVIGDHAHSDL-------GDKGNKYGGGKFHGTSEIPCNGDLCGK 316

[Close]

BLAST of Cucsa.031630 vs. TrEMBL
Match: W9RM69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.1e-82
Identity = 175/299 (58.53%), Postives = 216/299 (72.24%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSL-SSLPSP 74
           MVVVQA+KL+LPNPSLSSP I+SLLFEP SLSLALMHSDSSFSLYPS SPL + SSLP P
Sbjct: 1   MVVVQASKLNLPNPSLSSPHITSLLFEPTSLSLALMHSDSSFSLYPSLSPLRISSSLPPP 60

Query: 75  QVVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVV 134
           Q  VP+PCSS+ FV LQN NS ++ + LFV SGPH GGS+ILLRFY+L+G KLF +A VV
Sbjct: 61  QTTVPAPCSSSTFVLLQNPNS-AEPRPLFVASGPHAGGSRILLRFYILQGKKLFHKARVV 120

Query: 135 CTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGL 194
           C QKD +  ++ GVLV+  HG+SV+LAGSVNFFAMYSVS  K W+FAVK+V   DD + +
Sbjct: 121 CNQKDFQFVERFGVLVDSVHGVSVKLAGSVNFFAMYSVSGSKAWIFAVKLV---DDEV-V 180

Query: 195 KLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAK 254
           KLMRCAVI+C KP++S+ +SFG L+LGE+ G+RV NLR  V+GR +KV+NL  N+ S+ +
Sbjct: 181 KLMRCAVIECSKPVFSITLSFGVLILGEEWGVRVFNLRQLVKGRAKKVKNLQPNSKSDGR 240

Query: 255 REVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDK 313
               KS LP+  V G     DL     V S  G        E +    CN  LDGK ++
Sbjct: 241 ----KSRLPN-GVIGADVLGDLK--DYVHSEGGDRCGKCVIEGSSERTCNCYLDGKSNR 287

[Close]

BLAST of Cucsa.031630 vs. TrEMBL
Match: V4UWE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.4e-73
Identity = 156/320 (48.75%), Postives = 213/320 (66.56%), Query Frame = 1


Query: 14  LMVVVQATKLSLPNPSLSS--PQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLP 73
           ++V+ +A+KLSLPNPSL S  PQI+S L+EP+SLSLALMHSDSS SLY S S  +LSSLP
Sbjct: 1   MVVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMHSDSSISLYSSISLFTLSSLP 60

Query: 74  S-PQVVVPSPCSSAAFVALQNS-NSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRR 133
           S PQV++PSP  S  F+ L ++ N N   +V F+  GPH+   +++LR YVL+ +  + +
Sbjct: 61  STPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGK 120

Query: 134 APVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV-GDGD 193
           A V C QK +  D+KLGVL++  HG+ ++L GSVNFFAMYS+SS KIWVF VK++ GDGD
Sbjct: 121 AQVFCKQKGVSFDEKLGVLLDINHGLGLKLVGSVNFFAMYSLSSSKIWVFGVKLMDGDGD 180

Query: 194 DGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANT 253
           DG+ +KLMRCAVI+CCKP+WSL++SFGF++LGEDNG+RV+NLR  V+G+ +K++N     
Sbjct: 181 DGVRVKLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN----- 240

Query: 254 SSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDG 313
                     S LP             NG   ++   GF+    R      +ACNG LD 
Sbjct: 241 ----------SSLP-------------NG---IIGDYGFDGPTER------IACNGYLDE 283

Query: 314 KLDKISSSGRTQEDSFSDQS 329
           K+DK S S + +   +   S
Sbjct: 301 KIDKHSVSVKQRSVKYKQDS 283

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BLAST of Cucsa.031630 vs. TrEMBL
Match: A0A067EV01_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 152/320 (47.50%), Postives = 210/320 (65.62%), Query Frame = 1


Query: 14  LMVVVQATKLSLPNPSLSS--PQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLP 73
           ++V+ +A+KLSLPNPSL S  PQI+S L+EP+SLSLALM SDSS SLY S S  +LSSLP
Sbjct: 1   MVVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMRSDSSISLYSSISLFTLSSLP 60

Query: 74  S-PQVVVPSPCSSAAFVALQNS-NSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRR 133
           S PQV++PSP  S  F+ L ++ N N   +V F+  GPH+   +++LR YVL+ +  + +
Sbjct: 61  STPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGK 120

Query: 134 APVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV-GDGD 193
           A V C QK +  D+KLGVL++  HG+ ++L GSVNFFAM+S+SS KIWVF V ++ GDGD
Sbjct: 121 AQVFCKQKGVSFDEKLGVLLDITHGVGLKLVGSVNFFAMHSLSSSKIWVFGVMLMDGDGD 180

Query: 194 DGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANT 253
           DG+ + LMRCAVI+CCKP+WSL++SFGF++LGEDNG+RV+NLR  V+G+ +K++N     
Sbjct: 181 DGVRVNLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN----- 240

Query: 254 SSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDG 313
                     S LP             NG   ++   GF+    R      +ACNG LD 
Sbjct: 241 ----------SSLP-------------NG---IIGDYGFDGPTER------IACNGYLDE 283

Query: 314 KLDKISSSGRTQEDSFSDQS 329
           K+DK S S + +   +   S
Sbjct: 301 KIDKHSVSVKQRSVKYKQDS 283

[Close]

BLAST of Cucsa.031630 vs. TrEMBL
Match: A5C8T8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011687 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.6e-69
Identity = 157/306 (51.31%), Postives = 199/306 (65.03%), Query Frame = 1


Query: 6   PKLESPNPLMVVVQATKLSLPNPSLSS-PQISSLLFEPHSLSLALMHSDSSFSLYPSFSP 65
           P L +   LM  VQA KLSLP PS SS P I+SLLFEPHS SLALMHSDSSFSLYPS SP
Sbjct: 3   PVLPAVAALMFEVQACKLSLPRPSFSSLPPITSLLFEPHSNSLALMHSDSSFSLYPSLSP 62

Query: 66  LSLSSLPSPQ------VVVPSPCSSAAFVALQNSNSNS---DTKVLFVVSGPHKGGSQIL 125
            S    PSPQ       +VP P S A F+ LQN   NS   + +VLFVV+ PH+ G+ ++
Sbjct: 63  FSP---PSPQSQAPTLTLVPPPSSFATFLLLQNPRPNSGAHNPRVLFVVAAPHRAGAAVI 122

Query: 126 LRFYVLEGSKLFRRAPVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMK 185
           LRFYVL+ ++LF +A V+CTQ+DL+ D KLGVL N  HG+SV+L GS+N FAMYSVS+ K
Sbjct: 123 LRFYVLQKTQLFTKAEVLCTQRDLQFDPKLGVLFNANHGVSVKLGGSINIFAMYSVSNSK 182

Query: 186 IWVFAVKMVGDG-DDGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFV 245
           IWVF+VKM GD  DDG+ LKL +CAVIDC  P++S+++S  FL+LGE+NG+RV  LRP V
Sbjct: 183 IWVFSVKMAGDDRDDGVVLKLRKCAVIDCGVPVFSISVSGEFLILGEENGVRVFQLRPLV 242

Query: 246 RG----RGRKVRNLN---------ANTSSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLV 288
           +G      R+ +NLN         A   +N +           D+   SG N L G + +
Sbjct: 243 KGWIRKEQRESKNLNFPNGCGSKSAGVEANMEIACNGDLEGRTDLHRVSGMNILQGRNKL 302

[Close]

BLAST of Cucsa.031630 vs. NCBI nr
Match: gi|778680625|ref|XP_011651361.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.3e-166
Identity = 301/304 (99.01%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGV VNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR
Sbjct: 181 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSL+CNGCLDGKLDKIS
Sbjct: 241 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLSCNGCLDGKLDKIS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630 vs. NCBI nr
Match: gi|778680623|ref|XP_011651360.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.3e-166
Identity = 301/304 (99.01%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGV VNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR
Sbjct: 181 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSL+CNGCLDGKLDKIS
Sbjct: 241 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLSCNGCLDGKLDKIS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630 vs. NCBI nr
Match: gi|659123263|ref|XP_008461571.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFS LSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSS+KIWVFAVKMVGDGDD IGLK
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMVGDGDDDIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWS+NISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN KR
Sbjct: 181 LMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNGKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPH DVCGTSGG DLNGGSLVVSSNGFNLQASRSEDAGS ACNGCLDGK DK S
Sbjct: 241 EVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSACNGCLDGKFDKNS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630 vs. NCBI nr
Match: gi|659123261|ref|XP_008461570.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFS LSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSS+KIWVFAVKMVGDGDD IGLK
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMVGDGDDDIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWS+NISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN KR
Sbjct: 181 LMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNGKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPH DVCGTSGG DLNGGSLVVSSNGFNLQASRSEDAGS ACNGCLDGK DK S
Sbjct: 241 EVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSACNGCLDGKFDKNS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630 vs. NCBI nr
Match: gi|659123257|ref|XP_008461569.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFS LSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSS+KIWVFAVKMVGDGDD IGLK
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMVGDGDDDIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWS+NISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN KR
Sbjct: 181 LMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNGKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPH DVCGTSGG DLNGGSLVVSSNGFNLQASRSEDAGS ACNGCLDGK DK S
Sbjct: 241 EVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSACNGCLDGKFDKNS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

The following BLAST results are available for this feature:

BLAST of Cucsa.031630 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WXB1_PRUPE	3.1e-90	59.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1	[more]
W9RM69_9ROSA	3.1e-82	58.53	Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1	[more]
V4UWE2_9ROSI	4.4e-73	48.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1	[more]
A0A067EV01_CITSI	2.7e-70	47.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1	[more]
A5C8T8_VITVI	6.6e-69	51.31	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011687 PE=4 SV=1	[more]

BLAST of Cucsa.031630 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680625\|ref\|XP_011651361.1\|	1.3e-166	99.01	PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus]	[more]
gi\|778680623\|ref\|XP_011651360.1\|	1.3e-166	99.01	PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus]	[more]
gi\|659123263\|ref\|XP_008461571.1\|	2.1e-161	96.38	PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo]	[more]
gi\|659123261\|ref\|XP_008461570.1\|	2.1e-161	96.38	PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo]	[more]
gi\|659123257\|ref\|XP_008461569.1\|	2.1e-161	96.38	PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cucsa.031630.1	Cucsa.031630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37383	FAMILY NOT NAMED	coord: 16..276 score: 5.0

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cucsa.031630	Cla007115	Watermelon (97103) v1	cgywmB003
Cucsa.031630	MELO3C023764	Melon (DHL92) v3.5.1	cgymeB003
Cucsa.031630	ClCG05G012060	Watermelon (Charleston Gray)	cgywcgB004
Cucsa.031630	CSPI03G20420	Wild cucumber (PI 183967)	cgycpiB003
Cucsa.031630	CmaCh01G003950	Cucurbita maxima (Rimu)	cgycmaB0011
Cucsa.031630	CmoCh01G004190	Cucurbita moschata (Rifu)	cgycmoB0010
Cucsa.031630	Lsi05G004020	Bottle gourd (USVL1VR-Ls)	cgylsiB004
Cucsa.031630	Cp4.1LG02g17150	Cucurbita pepo (Zucchini)	cgycpeB0008
Cucsa.031630	MELO3C023764.2	Melon (DHL92) v3.6.1	cgymedB004
Cucsa.031630	CsaV3_3G020350	Cucumber (Chinese Long) v3	cgycucB006
Cucsa.031630	Cla97C05G093960	Watermelon (97103) v2	cgywmbB004
Cucsa.031630	Bhi01G001440	Wax gourd	cgywgoB005
Cucsa.031630	Carg07488	Silver-seed gourd	carcgyB0854

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cucsa.031630	Cucurbita maxima (Rimu)	cgycmaB0005
Cucsa.031630	Cucurbita moschata (Rifu)	cgycmoB0004
Cucsa.031630	Cucumber (Chinese Long) v2	cgycuB003
Cucsa.031630	Cucurbita pepo (Zucchini)	cgycpeB0009
Cucsa.031630	Silver-seed gourd	carcgyB0552