CmoCh01G004190 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh01G004190
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Ribosome biogenesis ERB1
Location	Cmo_Chr01 : 2050690 .. 2058074 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTAGATGTATTGAAGTTTAATGGCTTGGTGTGTCGTTTCTCTCTCTTTACCTTCGTCTGCAACTAGAAATGGAAGAATCCCTTCAATTTTGACCACCCAATTGAAACTTTCGACTTCCGGGTCTTGCATTTCTCAATCGAACACTAATCAAGTGGAGCAGCCAAATCCCAAACCCAACCCCAAAGCCCTGAGTTACGGTTTCTTAACCCAAATCAAAAGAATGCTTCCCTTCAATCTCGATCTTCTTCTTCTACAGCACCATCGATTCCTGTCTCTTTGAAAGGTTTTAAGCGTTTCTGGTGTTAAGATCCTCTAATGGTTGTTGTACAGGCCACCAAGCTTAGCCTCCCTAACCCTTCTCTCTCTTCCCCTCAAATCACTTCCTTTCTCTTCGAACCCCATTCCCTTTCTCTTGCTCTAATGCACTCTGATTCTTCTTTCTCTCTCTACCCTTCATTTTCCCCTTCCTTTCTCTCCTCCCTTCCGTCCCCTCAACTGGTTGTGCCTTCTCCCTCTTCTTCTGCGGCCTTCGTTGCGCTTCGGAATTCTGATTCCAACTCTGATTCTAAAGTTCTGTTTGTGGTCTCTGGCCCCCATCAGGGCGGCTCTCGAATTCTCCTCCGCTTTTATGTTTTGGAGACTTGTAATTTGTTCAGGAGAGTTCGAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTTAATTTGAGACATGGGCTTTCGGTTCGTTTAGCTGGGTCGGTCAATTTCTTCGCCATCTACTCTATTTCGAGCTCCAAGATATGGGTTTTTGCGGTGAAGATGGTGGCCGGCGGTGATGGTAGGGATGATGTGATGGATTTGAAATTGATGAGGTGTGCTGTGATTGACTGCTGCAAACCCATTTGGTCGATTAGCATTTCTTTTGGGTATTTGCTTTTGGGGGAAGATAATGGAGTTAGGGTTCTTAATTTGAGGCCTTTTGTGAGAGGGCGTGGGCGAAAAGTTAGAAATCTGTATGCCAAACGTGAAGTTCACAAGTCATTTTTGCCTCATGGAGAAGTTTATGGAACTTCTGGTGGTACAGACTTGAATGGTGGTTCCCTTTTTGTTGGCAACAATGGACTCAACGAACATGCCAGTAGAAGTGATGGTGCTCAAAGTTCAGCGATTTGCAATGGATCTTTGGATGGGAAGATGGACAAACATTTTGATTCTGGTGAGTTAAGAAATCTATATGACTTATTAGCCATATTGGTCGTGTATCCTGGAATTTGGCTAATACTTTGTTGATTTTTTATTCGTTCTGAAAGTTCAATCACAAGTTTAATCCCGGGAGCATTTGCTATGCGTAAGAGTAATTCAAACACTAGGCGAATCCGTGATTATCGTATGTTAACAATGATTTCTTTGTAGGAATTTATCCTTGAACTTAAATTGTGGTAGGAGTTTATTGAGTCTGTGGTCACAGATTGAAGATAATTTATCAGCTTCCATTGGCTTGATACGTGCTGAAGTTTGAGACTGAGCGATAAAAGTTTGAGGAGTTTGGAACAATGCTTTATTCGAAGTGTATGCTTTTAGTAACTACAGGAGTGTCCAAGAAAGCTTGCTTCATTATAAATGAAGGAGACGGGAGAAATCTATCGAGTTGATATCGAGTTGCTGCATTGGTGTTGGGGAGGTTGAATTGAAACAATATCTAAATTCAAGATTTCTGCCAATTATAATGTGAAGCTCAATGATCCATGGGATATGAAATAAAGCCTTCCTTGTTGGGTATCGCAGATAGACGTATCGTTTTTTTTAGCTGATTCATTTTGGATGGATACACGCAACATTTCTTTAACTGTGGCCAGCTACCTGATTTGCACTCGAATACTTTTCATGACAACAACATATGTTTGATCTATTATATTAGCTAACGACTTGTTTTTAGGTTTTCCTTATATGGCCCGGACATGGGTGCTGAAGGTGTCGTCCTTTGGTTTATTTCATAAGGATGCCTCTAGATGGTAAATTACTGATTGTTGAAGGGGTTAAACTTGGATAGTTCATTCATATCCAAAAAAAACTTGGACAGTTCACCAATTTTCCACTTGAAACGAAATCCTTAGCTGGAGTGACGATCTTTGTTTTTCAATGTCTATTATATTATTATTATTGCTATAATTTCTGGATCTCGTTCATGCCAAAACATTGTAGTTGTCAAGTTGTTGGCATATGCCTCTGATCGTGTATTTTTAATTGCAGTGAGATCAAGATCTGTAAAACTGAGACAAGATTCGAGTGAAGGACTGTATTTTGTGGCACTGAAGGGCAGAGGAAATGAAGATCTGCGATCTGCAAAAATGATGCCATTAAAGGCATTATCAATTCAAGCACTTTCTCCCAGGAAAATCTTAATCCTGGACTCTGTTGGTGATTTACATCTGTTGCACCTTGCTAGCAGTGCTAATGGATCAGATTTTTCGTACAACATTCGACCATTGCCTCATCTAATGAAAGTTCAAACGCTGACCAGCGTTCCTGATACATCCATAAGTATGCTTGTCTGAATTCTTTGTTCTATACGTTTCTTCTCTTTGCTACCTTTTCAAAGGATTCTCCTTGTTTTTAGTCATTCTATTAGGTGCTTGAAAGAGAGAAAAAATATACTGGAAGGTTGGCCGAAGTAGTTTGTACAAGTGTGAGCCTTGGAGGAACCCCAAGATGCCCAATTTGATTGGGCCACGATGTTGCATTCTCTGTAGACAGGTGTCAAAGGACGTCCGATCATATCCTATGGAGCTGTAATTTACCCGATGCTGTTTAGAGCAAACAACGAGTTCGGCTTGAGTTTGAATAGACATAGGGGTTTCAAAGAGATGATTGAGAAGTTTAGTCTCTACCCTCCATTCCGAGAAAGAAAGGTTTTCGTGGCAGGCTACGGAGTGTGTTGTTTTATGGGGCCTGCGAAGGGAAAAGAATAATAGAGTCTTTTGAGGGCTTGAGAGGTGTTAAAGTGATGTTTGGCTTGTTGCTATTTCACAACTCTCAGAACTAATAGAAATATAATACTTTTGCAGGGAATCAAACTGTGTGGCTATCTGACAAGCAACATTCAGTTCATATGATGATGATACCTGATGTTGATTCTGATGTCACTGAAAATAGGGGAAATGAGAGCGAGGAAGTCCCGATGAAAAAAATATCAGGTCTCTATCGATGCAGATGTTTCGGGTTATAACTTATTGGTCTGAATAGTATTTGTATTATCAAGAACTAGGAATTGCGTATATGCTCAACTTAGTCCCAACTTTGGGTTGTTTTTATTGCCAGATATGCAAGTTATATTTGCTGGTGAAAAGATTCAAGATATAACATCCTTGAGCGCGAATGCTGTTTTAATTCTTGGACAAGGTAATTTCTTGTTATTCGTATCGAAGTTCCTGCAAACACTTTGTTGTTGTATGCGAAAAAAATTGATTTAAGCTGCATGCTATCATTGCTTGTGTTTTAAAGATTATGTTGCAAATGGAACTACCCTGCCTGCTATTTTGAGTGCCTGTAGTGTTTGATTGGCTGCCAAACACCATTTTATTTTTGAAAGTACTTTCTGTATATTCGAAAAAGGATCCCAAATGCACTACTAATTTGGATTTGGTCTAATCAATATAGAGACTTTTATCCAGTTTAACCACGGGTTGTAGGTGCAAAACGTGGAGGCTCGGGGACATGGAAAACTTTGTGCGCATACTAGTTACTTCATATATGTTTTTAGGGTCAACTGGTAGTTCCCTTTTGCCATTTCTAATCCAATGATCAATCAAAGGTTGGAGAGCTTTCTTTCAGGGCTACTATTATATTTCTCTAATTGTAACTCCAGCCACGTACACCGTAAATAGGACCGCTGGTTGTAATCAAATGGTGATGATTTCTAATGAAATTTAATGGTTGAGAAACTAAGTAGCATCTTGGGTAGAGCTATGACTTTCTCCTCATGTAACAGCCTAAGTCTACCGTTAACAAATATTGTCCGCTTTGGCCTATTGCCTATCACTGTCAACCTCACGGTTTTAAAACGTGTATGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTTTCCAGCCGATGTGGGATCTCACAATCTACCCTCCTTCAGGGCCTATCGTCCTAGCTGACACTTGTTCCCTTCTCCAATCGATGTGATACCCCCCAATTCCACCCCCCTTTAAGGCCTAGCGTCCTTGCTGGCACACCGCATCATGTCCACCCCCTTTTGGGGCTCAGCCTCCTCGCTGGCACATCGCCCGGGTGACTCGGATGCCAATAGCCAAGCCCACCGCTAACAAATATTGTTCGCTTTGGCCCATTACGCATCGCCGTCTGTGGGATCTCACAATCCACCCTCCTTTGGAGCCCAGTGTCCTCATTGGCACTCGTTCCCTTCTCCAATCGATGTGAGACCCCCCACCACCCCCCTTCGGGGCCCATCGTCCTTGCATGTCCACCCCCTTCAGGGCTCAGCCTCCTCGCTGGCACATCGCTCGGTGTGGCTCTGATACCATTTGTAATGACTCAAACCCACCACTAACAGATATTGTCCTCTTTGGACTTTCCCTTTCGGGGTTCCCCTTAAGGTTTTTAAAACACGTCTACTAGGGAGAGGCTTCCACACCCTTATAAAGATTGCTTCGTTCTCCTCCCCAACCGATGTGAGATCTCGCACCTCAAATAAAAGTGGTCAAAGTTACTTCTACTGTTGGAGGTTTCAAGTGATAATTAGACCTTCAGCTGTGCATCCTCATTCTATGGAGACGGTTAGGGAAATCAAGGTGTGTTCTAAGGTTAGGACGAGAAGATTATTACTATAAACAATTAGGAAAATGTAGAGGGATTAGGCGAAAGGATAGGTGCTACTTTGGCCAGCTATAAAAACGAAAAGGAAAGAAGATCTTTGTGCTAACGCTTGCTTCGTCGGTTTTTTTTTTACCTTGTATATTCTTCATTTTCTATCAACTTATTTACAAAAATGACCATGTGAATTGCCACCAATGAAAAATTTCCCTTTAATTGAATCATACGCATGGTAGCTTGTAAAACTCGAATAATATCCTGTAATTCTTATATACAAATAAAGAAAAGAAAAGAAATGAAAAAAGGAAAAGTACTGCGGCCAAGAAACATCATATACTTTTCAAACTTTGTTCTTTGTTCTTTATCATGGCATTTTCTTCCGTTGTCAACAATGCTGATTTCTGTTAAGCAGGCAGCTTATATGCGTATACAATTTCCTGAAGTTTCCTCGGTGCCATTTTTAAGGGTAAGCAGCTTCTTATCTTGTCGCACGTTTCCTCATGCATGCGCTTGAATGTTCGTTTTTCGTTCTTGGTTATTTGTAGGACATTTTTCATTCAAGGCTGTGTTAGATGATCTCGTCCAGAGTGGTGGCTTCTTGGCTTCATGTTGTGCTCAAGTAAGAAACTGACCTATTCTACAAGTTAGTTCATGGTGGCTTCTTGGTTCCTAATTATTGTGTTACTGTACTGCAGTCTTCTCACATGTCCATGTCCATGGTGAATAAGATTCAAGAAGACCGCTCTGAATAGGTATGTTTTTATTTTTACTCAACTTTTTATTATTGAGAAACTGGTTGGAGAGGGGAACGAAGCACCCTATAAAGGGTGTGGAAACCTCTCCCTAATAGACGCGTTTTAAAACTGTGAGGCTAACGATGATATGTAACGAGCCAAAGCGGACAATATTTGTTAGCGGTGGGCTTAGGCTGTTACAAATGGTATCAGAGCCTGACACCGGGTGGTGTGCCAGCGAGGACACTGGCCCCCAAAGGAGGGTGGATTGTGAGATCCTACATTGGTTGGAGAGGGGAACGAAGCATCCTTTATAAGCGTGTGAGAACCTCTCCCTAAGAGATGCATTTTAAAACTGGGAGACTGACGACGATATGTAACGGGCCAAAGTGAACAATATCTGTTAGCGGTGGTTTACTCGTAAAGCTTTTAGGGTCTTTATCTGTTTTATTTTCATATATATATTGTTTTGGTCTTTTTGATGCCATTGGTGGTTTATAACCTGTTTTGAACATCCGTCTATCGTAATGAAGTTCTCGTCTCGCTCAGTTTTCTTTGAAAGGACTGGATCTATTCTGCTTCGAGAGATGATTTCACTGAATTAATCTAATTTTTGCTTCTATATATGTTCACAATCCTCCAGACTTATTTTGCATCAAGAGTATCTAATATTATTATTTGTCTGATTGAGATCTGTGGTCTATGGCACAGGACAATGCTTGGGAATATTCTTTTATGAAGTTCTGAAATTCTGAATATGGAAGTCTTTCAACCCAATAGGGAATAATGCACATGTGATGGAAGTCTTTCAACCCAATAGGGAATAATGCACATGTGATGGAAGTCTTTCAACAGAATAGAGCCACCCCCTCTGCTTAGCCTTGGCCTTGCATCCATGAGCTGCAAGACAAGTTTGGGGCCAAGAAACGAGCATGCTAGCCATTGGTACGTCTGTTTCGTTGCATCTTGGTTCAACTCGCAGACAGAATATCGTATATTTATTCAATCCGCTATCATGAAAGATACAACACAACAGAGACCTTGAGCTGGATTTAGTGTTGCAAGATGAATATCATAATTGCATGAAACCTTCCTAACTCGCAACATTCTAGTTTGAATCTATATATGCATCTACGACTCGTTCTCATTCGGGAATGTAGCTGTTCTTTTCTTTTCATCAGATGAACACATTTTCTCTCAGAGATGACTGTTTTGAGAACTTTTTACTGTGTTTAGACTGCTAAATCTGCATTTGTTTTGTTCATCATTCAAATTTTTGTTACAGTTGTATGAGCTCCTCAGCCAAATGAAGTGAAAGTTGTTTGTGTGAAGGGCAATGGAAGCCCATAGCCCCAGAACAGAGCCTCTGTTTTTCATGGGATTGCATTTAGATGAGACAGAATTGATGGGTATGATGAGTCCCCAACAGTTGGGACCCTCCCACGCCCATAATTGAAACCCTTCACTGTCATTACAATGTTGATAGCTTCCATCACATGTGCGCATGCCATTTTCGTCCCTTCATCCACTCCTTTTTGCTCATACAACTCAAAGATAACTACTTCACACTTCCATCCATATCTTATGCTCTCCCCCTCCCATCTTTTTCCCACCCATATCTTCTCATGGAAGACAGTGATTACTGATTAGACATGAAGATGAGGAGAATATTATTTGTATCTCTCTTTTTCTAACGCTTTAATCTCGACCATGTCTACCAAACATTGGAGATCGACACGATTTCGCCACACAACGTTTACTTTAAAGTGGCACTGTTCTTATATTGTTCTTATATCAATT

mRNA sequence

TTTAGATGTATTGAAGTTTAATGGCTTGGTGTGTCGTTTCTCTCTCTTTACCTTCGTCTGCAACTAGAAATGGAAGAATCCCTTCAATTTTGACCACCCAATTGAAACTTTCGACTTCCGGGTCTTGCATTTCTCAATCGAACACTAATCAAGTGGAGCAGCCAAATCCCAAACCCAACCCCAAAGCCCTGAGTTACGGTTTCTTAACCCAAATCAAAAGAATGCTTCCCTTCAATCTCGATCTTCTTCTTCTACAGCACCATCGATTCCTGTCTCTTTGAAAGGTTTTAAGCGTTTCTGGTGTTAAGATCCTCTAATGGTTGTTGTACAGGCCACCAAGCTTAGCCTCCCTAACCCTTCTCTCTCTTCCCCTCAAATCACTTCCTTTCTCTTCGAACCCCATTCCCTTTCTCTTGCTCTAATGCACTCTGATTCTTCTTTCTCTCTCTACCCTTCATTTTCCCCTTCCTTTCTCTCCTCCCTTCCGTCCCCTCAACTGGTTGTGCCTTCTCCCTCTTCTTCTGCGGCCTTCGTTGCGCTTCGGAATTCTGATTCCAACTCTGATTCTAAAGTTCTGTTTGTGGTCTCTGGCCCCCATCAGGGCGGCTCTCGAATTCTCCTCCGCTTTTATGTTTTGGAGACTTGTAATTTGTTCAGGAGAGTTCGAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTTAATTTGAGACATGGGCTTTCGGTTCGTTTAGCTGGGTCGGTCAATTTCTTCGCCATCTACTCTATTTCGAGCTCCAAGATATGGGTTTTTGCGGTGAAGATGGTGGCCGGCGGTGATGGTAGGGATGATGTGATGGATTTGAAATTGATGAGGTGTGCTGTGATTGACTGCTGCAAACCCATTTGGTCGATTAGCATTTCTTTTGGGTATTTGCTTTTGGGGGAAGATAATGGAGTTAGGGTTCTTAATTTGAGGCCTTTTGTGAGAGGGCGTGGGCGAAAAGTTAGAAATCTGTATGCCAAACGTGAAGTTCACAAGTCATTTTTGCCTCATGGAGAAGTTTATGGAACTTCTGGTGGTACAGACTTGAATGGTGGTTCCCTTTTTGTTGGCAACAATGGACTCAACGAACATGCCAGTAGAAGTGATGGTGCTCAAAGTTCAGCGATTTGCAATGGATCTTTGGATGGGAAGATGGACAAACATTTTGATTCTGTGAGATCAAGATCTGTAAAACTGAGACAAGATTCGAGTGAAGGACTGTATTTTGTGGCACTGAAGGGCAGAGGAAATGAAGATCTGCGATCTGCAAAAATGATGCCATTAAAGGCATTATCAATTCAAGCACTTTCTCCCAGGAAAATCTTAATCCTGGACTCTGTTGGTGATTTACATCTGTTGCACCTTGCTAGCAGTGCTAATGGATCAGATTTTTCGTACAACATTCGACCATTGCCTCATCTAATGAAAGTTCAAACGCTGACCAGCGTTCCTGATACATCCATAAGGAATCAAACTGTGTGGCTATCTGACAAGCAACATTCAGTTCATATGATGATGATACCTGATGTTGATTCTGATGTCACTGAAAATAGGGGAAATGAGAGCGAGGAAGTCCCGATGAAAAAAATATCAGATATGCAAGTTATATTTGCTGGTGAAAAGATTCAAGATATAACATCCTTGAGCGCGAATGCTGTTTTAATTCTTGGACAAGGCAGCTTATATGCGTATACAATTTCCTGAAGTTTCCTCGGTGCCATTTTTAAGGGACATTTTTCATTCAAGGCTGTGTTAGATGATCTCGTCCAGAGTGGTGGCTTCTTGGCTTCATGTTGTGCTCAATCTTCTCACATGTCCATGTCCATGGTGAATAAGATTCAAGAAGACCGCTCTGAATAGGACAATGCTTGGGAATATTCTTTTATGAAGTTCTGAAATTCTGAATATGGAAGTCTTTCAACCCAATAGGGAATAATGCACATGTGATGGAAGTCTTTCAACCCAATAGGGAATAATGCACATGTGATGGAAGTCTTTCAACAGAATAGAGCCACCCCCTCTGCTTAGCCTTGGCCTTGCATCCATGAGCTGCAAGACAAGTTTGGGGCCAAGAAACGAGCATGCTAGCCATTGTTGTATGAGCTCCTCAGCCAAATGAAGTGAAAGTTGTTTGTGTGAAGGGCAATGGAAGCCCATAGCCCCAGAACAGAGCCTCTGTTTTTCATGGGATTGCATTTAGATGAGACAGAATTGATGGGTATGATGAGTCCCCAACAGTTGGGACCCTCCCACGCCCATAATTGAAACCCTTCACTGTCATTACAATGTTGATAGCTTCCATCACATGTGCGCATGCCATTTTCGTCCCTTCATCCACTCCTTTTTGCTCATACAACTCAAAGATAACTACTTCACACTTCCATCCATATCTTATGCTCTCCCCCTCCCATCTTTTTCCCACCCATATCTTCTCATGGAAGACAGTGATTACTGATTAGACATGAAGATGAGGAGAATATTATTTGTATCTCTCTTTTTCTAACGCTTTAATCTCGACCATGTCTACCAAACATTGGAGATCGACACGATTTCGCCACACAACGTTTACTTTAAAGTGGCACTGTTCTTATATTGTTCTTATATCAATT

Coding sequence (CDS)

ATGGTTGTTGTACAGGCCACCAAGCTTAGCCTCCCTAACCCTTCTCTCTCTTCCCCTCAAATCACTTCCTTTCTCTTCGAACCCCATTCCCTTTCTCTTGCTCTAATGCACTCTGATTCTTCTTTCTCTCTCTACCCTTCATTTTCCCCTTCCTTTCTCTCCTCCCTTCCGTCCCCTCAACTGGTTGTGCCTTCTCCCTCTTCTTCTGCGGCCTTCGTTGCGCTTCGGAATTCTGATTCCAACTCTGATTCTAAAGTTCTGTTTGTGGTCTCTGGCCCCCATCAGGGCGGCTCTCGAATTCTCCTCCGCTTTTATGTTTTGGAGACTTGTAATTTGTTCAGGAGAGTTCGAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTTAATTTGAGACATGGGCTTTCGGTTCGTTTAGCTGGGTCGGTCAATTTCTTCGCCATCTACTCTATTTCGAGCTCCAAGATATGGGTTTTTGCGGTGAAGATGGTGGCCGGCGGTGATGGTAGGGATGATGTGATGGATTTGAAATTGATGAGGTGTGCTGTGATTGACTGCTGCAAACCCATTTGGTCGATTAGCATTTCTTTTGGGTATTTGCTTTTGGGGGAAGATAATGGAGTTAGGGTTCTTAATTTGAGGCCTTTTGTGAGAGGGCGTGGGCGAAAAGTTAGAAATCTGTATGCCAAACGTGAAGTTCACAAGTCATTTTTGCCTCATGGAGAAGTTTATGGAACTTCTGGTGGTACAGACTTGAATGGTGGTTCCCTTTTTGTTGGCAACAATGGACTCAACGAACATGCCAGTAGAAGTGATGGTGCTCAAAGTTCAGCGATTTGCAATGGATCTTTGGATGGGAAGATGGACAAACATTTTGATTCTGTGAGATCAAGATCTGTAAAACTGAGACAAGATTCGAGTGAAGGACTGTATTTTGTGGCACTGAAGGGCAGAGGAAATGAAGATCTGCGATCTGCAAAAATGATGCCATTAAAGGCATTATCAATTCAAGCACTTTCTCCCAGGAAAATCTTAATCCTGGACTCTGTTGGTGATTTACATCTGTTGCACCTTGCTAGCAGTGCTAATGGATCAGATTTTTCGTACAACATTCGACCATTGCCTCATCTAATGAAAGTTCAAACGCTGACCAGCGTTCCTGATACATCCATAAGGAATCAAACTGTGTGGCTATCTGACAAGCAACATTCAGTTCATATGATGATGATACCTGATGTTGATTCTGATGTCACTGAAAATAGGGGAAATGAGAGCGAGGAAGTCCCGATGAAAAAAATATCAGATATGCAAGTTATATTTGCTGGTGAAAAGATTCAAGATATAACATCCTTGAGCGCGAATGCTGTTTTAATTCTTGGACAAGGCAGCTTATATGCGTATACAATTTCCTGA

Homology

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BLAST of CmoCh01G004190 vs. TrEMBL
Match: M5WXB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1)

HSP 1 Score: 474.6 bits (1220), Expect = 1.5e-130
Identity = 268/475 (56.42%), Postives = 342/475 (72.00%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSPQ 60
           MVVVQA+KL LPNPSLSSP ITS LFEPHSLSLALMHSDS+ SLYPS SP  LSSLP PQ
Sbjct: 27  MVVVQASKLRLPNPSLSSPNITSLLFEPHSLSLALMHSDSTLSLYPSISPLSLSSLPPPQ 86

Query: 61  LVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
            ++  PSSS+ F+ L+N + N +++VLF+VSGP++GGS++LLRFY+L     F R +VVC
Sbjct: 87  TLIAPPSSSSTFLLLQNPNPNPNTRVLFIVSGPYRGGSQVLLRFYILHKQKQFVRAQVVC 146

Query: 121 TQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRD-DV 180
           TQK+L+ D KLGVLV+  HG+S++LAGSVNFFA+YS+SSSKIWVFAVK +   D  D D 
Sbjct: 147 TQKELQFDQKLGVLVDAHHGVSIKLAGSVNFFAMYSVSSSKIWVFAVKSIDNDDNDDNDG 206

Query: 181 MDLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVR--NLYAKR 240
           M +KLMRCAVI+CCK +WSISISFG+L+LGEDNGVRV NLR  V+GR RK +  N  +K 
Sbjct: 207 MVVKLMRCAVIECCKLVWSISISFGFLILGEDNGVRVFNLRQLVKGRVRKAKLLNSSSKT 266

Query: 241 EVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKMDKH 300
           E     LP+G V G    +DL       G+ G N++        S   CNG L GK D++
Sbjct: 267 EGRNLCLPNG-VIGDHAHSDL-------GDKG-NKYGGGKFHGTSEIPCNGDLCGKNDRN 326

Query: 301 FDSVRSRSVKLRQDS-SEGLYFVALKGRGNEDLRSAKMMPLKALSIQALSPRKILILDSV 360
           + S + RSVKLRQDS  EG+ FV  KG+  E  +S +M+P KA+SI+ALSP K LILDS 
Sbjct: 327 YVSAKQRSVKLRQDSPEEGVCFVTFKGKEFETSKSTRMIPAKAISIEALSPNKFLILDSN 386

Query: 361 GDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHMMMI 420
           G L +LH++S   GS+ +  +R LPH+MKVQ L  +PD + R Q+VW SD  +SVHMM+ 
Sbjct: 387 GALRILHISSPVLGSNITSYLRELPHIMKVQKLAVLPDIASRTQSVWASDGFNSVHMMLA 446

Query: 421 PDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGSLY 472
            D+D+   EN  N+SEE  +  IS +  IFA EKIQD+  L+ANA+LILGQG+++
Sbjct: 447 SDMDNAGNENDRNDSEE-KLIHISVVLTIFASEKIQDLIPLAANAILILGQGNMW 491

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BLAST of CmoCh01G004190 vs. TrEMBL
Match: W9RM69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 8.6e-115
Identity = 259/499 (51.90%), Postives = 337/499 (67.54%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSP-SFLSSLPSP 60
           MVVVQA+KL+LPNPSLSSP ITS LFEP SLSLALMHSDSSFSLYPS SP    SSLP P
Sbjct: 1   MVVVQASKLNLPNPSLSSPHITSLLFEPTSLSLALMHSDSSFSLYPSLSPLRISSSLPPP 60

Query: 61  QLVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVV 120
           Q  VP+P SS+ FV L+N +S ++ + LFV SGPH GGSRILLRFY+L+   LF + RVV
Sbjct: 61  QTTVPAPCSSSTFVLLQNPNS-AEPRPLFVASGPHAGGSRILLRFYILQGKKLFHKARVV 120

Query: 121 CTQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRDDV 180
           C QKD +  ++ GVLV+  HG+SV+LAGSVNFFA+YS+S SK W+FAVK+V      DD 
Sbjct: 121 CNQKDFQFVERFGVLVDSVHGVSVKLAGSVNFFAMYSVSGSKAWIFAVKLV------DDE 180

Query: 181 MDLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNLY--AKR 240
           + +KLMRCAVI+C KP++SI++SFG L+LGE+ GVRV NLR  V+GR +KV+NL   +K 
Sbjct: 181 V-VKLMRCAVIECSKPVFSITLSFGVLILGEEWGVRVFNLRQLVKGRAKKVKNLQPNSKS 240

Query: 241 EVHKSFLPHGEVYGTSGGTDLNGG-SLFVGNNGLNEHASRSDGAQSSAICNGSLDGKMDK 300
           +  KS LP+G +     G D+ G    +V + G +          S   CN  LDGK ++
Sbjct: 241 DGRKSRLPNGVI-----GADVLGDLKDYVHSEGGDRCGKCVIEGSSERTCNCYLDGKSNR 300

Query: 301 HFDS-----------------VRSRSVKLRQDSSE-GLYFVALKGRGNEDLRSAKMMPLK 360
           H  S                 V+ R+V+LRQDSSE G  F+A  G+  E  +S  +  +K
Sbjct: 301 HLVSDNIVNFAHVANQVVEHAVKQRAVRLRQDSSEAGACFLAFSGKDVEASKSRVITSVK 360

Query: 361 ALSIQALSPRKILILDSVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIR 420
           A+SIQALSP+K LILDS G+LHLL   +   GSD + +IR LP +  VQ L  + D+SIR
Sbjct: 361 AISIQALSPKKFLILDSAGNLHLLCWFNRVTGSDMTPHIRQLPQVTNVQKLAVLADSSIR 420

Query: 421 NQTVWLSDKQHSVHMMMIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLS 476
            QTVWLSD  HS+H++   D+ + V+EN   E+EE  + +IS +Q IFA EKI+D+  L+
Sbjct: 421 TQTVWLSDGHHSLHVVAASDIVAAVSENDRTENEE-KLMQISVIQAIFASEKIEDVIPLA 480

[Close]

BLAST of CmoCh01G004190 vs. TrEMBL
Match: V4UWE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 7.3e-114
Identity = 244/478 (51.05%), Postives = 330/478 (69.04%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSS--PQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPS 60
           +V+ +A+KLSLPNPSL S  PQITS L+EP+SLSLALMHSDSS SLY S S   LSSLPS
Sbjct: 2   VVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMHSDSSISLYSSISLFTLSSLPS 61

Query: 61  -PQLVVPSPSSSAAFVALRNSDS-NSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRV 120
            PQ+++PSPS S  F+ L ++ + N   +V F+  GPH+   +++LR YVL+  N + + 
Sbjct: 62  TPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGKA 121

Query: 121 RVVCTQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGR 180
           +V C QK +  D+KLGVL+++ HGL ++L GSVNFFA+YS+SSSKIWVF VK++  GDG 
Sbjct: 122 QVFCKQKGVSFDEKLGVLLDINHGLGLKLVGSVNFFAMYSLSSSKIWVFGVKLM-DGDG- 181

Query: 181 DDVMDLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNLYAK 240
           DD + +KLMRCAVI+CCKP+WS+S+SFG+++LGEDNGVRVLNLR  V+G+ +K++N    
Sbjct: 182 DDGVRVKLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN---- 241

Query: 241 REVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKMDK 300
                S LP+G                 +G+ G        DG      CNG LD K+DK
Sbjct: 242 -----SSLPNG----------------IIGDYGF-------DGPTERIACNGYLDEKIDK 301

Query: 301 HFDSVRSRSVKLRQDSSEG-LYFVALKGRGNEDLRSAKM--MPLKALSIQALSPRKILIL 360
           H  SV+ RSVK +QDS EG   F+A + +  E L+S KM  M LKA+SIQA+S +K LIL
Sbjct: 302 HSVSVKQRSVKYKQDSDEGGACFLAFRMKEVEGLKSTKMPLMSLKAISIQAVSLKKFLIL 361

Query: 361 DSVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHM 420
           DS G+LH+LHL+S   GS+   +IR LPH+M VQ L   PD S+R QT+W++D  HSV++
Sbjct: 362 DSSGNLHMLHLSSPVAGSNIIGHIRQLPHVMNVQKLAVHPDISLRTQTIWITDGYHSVNV 421

Query: 421 MMIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGSLY 472
           M+  D+D+   EN  NESEE  + + S ++ IF GEKIQD+  L+AN +LILGQG+++
Sbjct: 422 MVSSDMDAADNENGRNESEE-NLTQCSVIEAIFVGEKIQDLVPLAANGLLILGQGNIW 444

[Close]

BLAST of CmoCh01G004190 vs. TrEMBL
Match: A0A067EV01_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.7e-113
Identity = 245/483 (50.72%), Postives = 330/483 (68.32%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSS--PQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPS 60
           +V+ +A+KLSLPNPSL S  PQITS L+EP+SLSLALM SDSS SLY S S   LSSLPS
Sbjct: 2   VVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMRSDSSISLYSSISLFTLSSLPS 61

Query: 61  -PQLVVPSPSSSAAFVALRNSDS-NSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRV 120
            PQ+++PSPS S  F+ L ++ + N   +V F+  GPH+   +++LR YVL+  N + + 
Sbjct: 62  TPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGKA 121

Query: 121 RVVCTQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGR 180
           +V C QK +  D+KLGVL+++ HG+ ++L GSVNFFA++S+SSSKIWVF V M+  GDG 
Sbjct: 122 QVFCKQKGVSFDEKLGVLLDITHGVGLKLVGSVNFFAMHSLSSSKIWVFGV-MLMDGDG- 181

Query: 181 DDVMDLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNLYAK 240
           DD + + LMRCAVI+CCKP+WS+S+SFG+++LGEDNGVRVLNLR  V+G+ +K++N    
Sbjct: 182 DDGVRVNLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN---- 241

Query: 241 REVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKMDK 300
                S LP+G                 +G+ G        DG      CNG LD K+DK
Sbjct: 242 -----SSLPNG----------------IIGDYGF-------DGPTERIACNGYLDEKIDK 301

Query: 301 HFDSVRSRSVKLRQDSSEG-LYFVALKGRGNEDLRSAKM--MPLKALSIQALSPRKILIL 360
           H  SV+ RSVK +QDS EG   F+A + +  E L+S KM  M LKA+SIQA+S +K LIL
Sbjct: 302 HSVSVKQRSVKYKQDSDEGGACFLAFRMKEVEGLKSTKMPLMSLKAISIQAVSLKKFLIL 361

Query: 361 DSVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHM 420
           DS G+LH+LHL+S   GS+   +IR LPH+M VQ L   PD S+R QT+W++D  HSV++
Sbjct: 362 DSSGNLHMLHLSSPVAGSNIIGHIRQLPHVMNVQKLAVHPDISLRTQTIWITDGYHSVNV 421

Query: 421 MMIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGSLYAY 477
           M+  D+D+   EN  NESEE  + + S ++ IF GEKIQD+  L+AN +LILGQG+LYAY
Sbjct: 422 MVASDMDAADNENGRNESEE-NLTQCSVIEAIFVGEKIQDLVPLAANGLLILGQGNLYAY 449

[Close]

BLAST of CmoCh01G004190 vs. TrEMBL
Match: F6GVQ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00100 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 4.0e-112
Identity = 255/489 (52.15%), Postives = 321/489 (65.64%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSS-PQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSP 60
           M  VQA KLSLP PS SS P ITS LFEPHS SLALMHSDSSFSLYPS SP    S PSP
Sbjct: 12  MFEVQACKLSLPRPSFSSLPPITSLLFEPHSNSLALMHSDSSFSLYPSLSPF---SPPSP 71

Query: 61  Q------LVVPSPSSSAAFVALRNSDSNSDS---KVLFVVSGPHQGGSRILLRFYVLETC 120
           Q       +VP PSS A F+ L+N   NS +   +VLFVV+ PH+ G+ ++LRFYVL+  
Sbjct: 72  QSQAPTLTLVPPPSSFATFLLLQNPRPNSGAHNPRVLFVVAAPHRAGAAVILRFYVLQKT 131

Query: 121 NLFRRVRVVCTQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMV 180
            LF +  V+CTQ+DL+ D KLGVL N  HG+SV+L GS+N FA+YS+S+SKIWVF+VKM 
Sbjct: 132 QLFTKAEVLCTQRDLQFDPKLGVLFNANHGVSVKLGGSINIFAMYSVSNSKIWVFSVKM- 191

Query: 181 AGGDGRDDVMDLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKV 240
             GD RDD + LKL +CAVIDC  P++SIS+S  +L+LGE+NGVRV  LRP V+G  RK 
Sbjct: 192 -AGDDRDDGVVLKLRKCAVIDCGVPVFSISVSGEFLILGEENGVRVFQLRPLVKGWIRK- 251

Query: 241 RNLYAKREVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSL 300
                +RE      P+G     S G + N                          CNG L
Sbjct: 252 ----EQRESKNLNFPNG-CGSKSAGVEAN----------------------MEIACNGDL 311

Query: 301 DGKMDKHFDSVRSRSVKLRQDSSEG-LYFVALKGRGNEDLRS--AKMMPLKALSIQALSP 360
           +G+ D H  SV+ RSV+ RQDSSEG   FVA KG+    L+S    ++P+KA+SIQALS 
Sbjct: 312 EGRTDLHRVSVKRRSVRFRQDSSEGSACFVAFKGKEVGHLKSMMPPLIPVKAVSIQALSA 371

Query: 361 RKILILDSVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDK 420
           +K LILDS GD+HLL L+    GS+ + ++R   + MKVQ L  +PDTS R +TVW+SD 
Sbjct: 372 KKFLILDSDGDVHLLCLSIYHLGSEITCHMRQFTNTMKVQKLAVLPDTSTRGRTVWISDG 431

Query: 421 QHSVHMMMIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQ 477
            +SVHMM + D D+   E+  N+SEE  +K+IS  Q IFA E+IQDI  L+ANA+LILGQ
Sbjct: 432 FYSVHMMTVSDTDTSANEDDENDSEE-KLKQISVTQAIFASERIQDIIPLAANALLILGQ 466

[Close]

BLAST of CmoCh01G004190 vs. NCBI nr
Match: gi|659123261|ref|XP_008461570.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo])

HSP 1 Score: 734.6 bits (1895), Expect = 1.1e-208
Identity = 396/482 (82.16%), Postives = 426/482 (88.38%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFS   LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL+NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSDDKLGVLVN RHG+SVRLAGSVNFFA+YS+SS KIWVFAVKMV  GDG DD+ 
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMV--GDGDDDI- 180

Query: 181 DLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNLYA----- 240
            LKLMRCAVIDCCKPIWSI+ISFG+LLLGEDNG+RV+NLRPFVRGRGRKVRNL A     
Sbjct: 181 GLKLMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 -KREVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKM 300
            KREV KSFLPHG+V GTSGGTDLNGGSL V +NG N  ASRS+ A SSA CNG LDGK 
Sbjct: 241 GKREVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSA-CNGCLDGKF 300

Query: 301 DKHFDSVRSRSVKLRQDSSEGLYFVALKGRGNEDLRSAKMMPLKALSIQALSPRKILILD 360
           DK+  SVR R +KLRQDSSEGLYFVALK R NEDL+SAKMM LKA+SIQALSP+KILILD
Sbjct: 301 DKNSSSVRPRCIKLRQDSSEGLYFVALKRRANEDLKSAKMMSLKAISIQALSPKKILILD 360

Query: 361 SVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHMM 420
           SVGDLHLLHLA++ANG DFS NIRPLPHLMKVQ LTS PDTSIRNQTVWLSD  HSVH+M
Sbjct: 361 SVGDLHLLHLANAANGFDFSCNIRPLPHLMKVQMLTSFPDTSIRNQTVWLSDGNHSVHIM 420

Query: 421 MIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGSLYAYT 477
           +IPDVDS V EN GNESEEV MK+IS MQ IF+GEKIQDITSL+ANAVLILGQGSLY YT
Sbjct: 421 VIPDVDSVVPENMGNESEEVLMKRISVMQAIFSGEKIQDITSLAANAVLILGQGSLYTYT 478

[Close]

BLAST of CmoCh01G004190 vs. NCBI nr
Match: gi|778680625|ref|XP_011651361.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus])

HSP 1 Score: 724.9 bits (1870), Expect = 8.9e-206
Identity = 391/482 (81.12%), Postives = 422/482 (87.55%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFSP  LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL+NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSDDKLGV VN RHG+SVRLAGSVNFFA+YS+SS KIWVFAVKMV  GDG DD +
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV--GDG-DDGI 180

Query: 181 DLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNL------Y 240
            LKLMRCAVIDCCKPIWS++ISFG+LLLGEDNG+RV+NLRPFVRGRGRKVRNL       
Sbjct: 181 GLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 AKREVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKM 300
           AKREV KSFLPH +V GTSGG DLNGGSL V +NG N  ASRS+ A  S  CNG LDGK+
Sbjct: 241 AKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDA-GSLSCNGCLDGKL 300

Query: 301 DKHFDSVRSRSVKLRQDSSEGLYFVALKGRGNEDLRSAKMMPLKALSIQALSPRKILILD 360
           DK   SVR R +KLRQDSSEGLYFVALKGRGNE L+SAKMM LKA+SIQALSP+KILILD
Sbjct: 301 DKISSSVRPRCIKLRQDSSEGLYFVALKGRGNEGLKSAKMMSLKAISIQALSPKKILILD 360

Query: 361 SVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHMM 420
           SVGDLHLLH+A++ANG DFS NIRPLPHLMK Q LTS PDT IRNQTVWLSD  HSVH+M
Sbjct: 361 SVGDLHLLHIANTANGFDFSCNIRPLPHLMKAQMLTSFPDTIIRNQTVWLSDGNHSVHIM 420

Query: 421 MIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGSLYAYT 477
           +IPDVDS V EN GNESEEV MK+IS MQ IFAGEKIQDITSL+ANAVLILGQGSLYAYT
Sbjct: 421 VIPDVDSVVPENMGNESEEVLMKRISVMQAIFAGEKIQDITSLAANAVLILGQGSLYAYT 478

[Close]

BLAST of CmoCh01G004190 vs. NCBI nr
Match: gi|659123257|ref|XP_008461569.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo])

HSP 1 Score: 721.8 bits (1862), Expect = 7.5e-205
Identity = 389/474 (82.07%), Postives = 419/474 (88.40%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFS   LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL+NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSDDKLGVLVN RHG+SVRLAGSVNFFA+YS+SS KIWVFAVKMV  GDG DD+ 
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMV--GDGDDDI- 180

Query: 181 DLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNLYA----- 240
            LKLMRCAVIDCCKPIWSI+ISFG+LLLGEDNG+RV+NLRPFVRGRGRKVRNL A     
Sbjct: 181 GLKLMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 -KREVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKM 300
            KREV KSFLPHG+V GTSGGTDLNGGSL V +NG N  ASRS+ A SSA CNG LDGK 
Sbjct: 241 GKREVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSA-CNGCLDGKF 300

Query: 301 DKHFDSVRSRSVKLRQDSSEGLYFVALKGRGNEDLRSAKMMPLKALSIQALSPRKILILD 360
           DK+  SVR R +KLRQDSSEGLYFVALK R NEDL+SAKMM LKA+SIQALSP+KILILD
Sbjct: 301 DKNSSSVRPRCIKLRQDSSEGLYFVALKRRANEDLKSAKMMSLKAISIQALSPKKILILD 360

Query: 361 SVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHMM 420
           SVGDLHLLHLA++ANG DFS NIRPLPHLMKVQ LTS PDTSIRNQTVWLSD  HSVH+M
Sbjct: 361 SVGDLHLLHLANAANGFDFSCNIRPLPHLMKVQMLTSFPDTSIRNQTVWLSDGNHSVHIM 420

Query: 421 MIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQG 469
           +IPDVDS V EN GNESEEV MK+IS MQ IF+GEKIQDITSL+ANAVLILGQG
Sbjct: 421 VIPDVDSVVPENMGNESEEVLMKRISVMQAIFSGEKIQDITSLAANAVLILGQG 470

[Close]

BLAST of CmoCh01G004190 vs. NCBI nr
Match: gi|778680623|ref|XP_011651360.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus])

HSP 1 Score: 710.7 bits (1833), Expect = 1.7e-201
Identity = 383/474 (80.80%), Postives = 414/474 (87.34%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFSP  LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL+NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSDDKLGV VN RHG+SVRLAGSVNFFA+YS+SS KIWVFAVKMV  GDG DD +
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV--GDG-DDGI 180

Query: 181 DLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNL------Y 240
            LKLMRCAVIDCCKPIWS++ISFG+LLLGEDNG+RV+NLRPFVRGRGRKVRNL       
Sbjct: 181 GLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 AKREVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKM 300
           AKREV KSFLPH +V GTSGG DLNGGSL V +NG N  ASRS+ A  S  CNG LDGK+
Sbjct: 241 AKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDA-GSLSCNGCLDGKL 300

Query: 301 DKHFDSVRSRSVKLRQDSSEGLYFVALKGRGNEDLRSAKMMPLKALSIQALSPRKILILD 360
           DK   SVR R +KLRQDSSEGLYFVALKGRGNE L+SAKMM LKA+SIQALSP+KILILD
Sbjct: 301 DKISSSVRPRCIKLRQDSSEGLYFVALKGRGNEGLKSAKMMSLKAISIQALSPKKILILD 360

Query: 361 SVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDKQHSVHMM 420
           SVGDLHLLH+A++ANG DFS NIRPLPHLMK Q LTS PDT IRNQTVWLSD  HSVH+M
Sbjct: 361 SVGDLHLLHIANTANGFDFSCNIRPLPHLMKAQMLTSFPDTIIRNQTVWLSDGNHSVHIM 420

Query: 421 MIPDVDSDVTENRGNESEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQG 469
           +IPDVDS V EN GNESEEV MK+IS MQ IFAGEKIQDITSL+ANAVLILGQG
Sbjct: 421 VIPDVDSVVPENMGNESEEVLMKRISVMQAIFAGEKIQDITSLAANAVLILGQG 470

[Close]

BLAST of CmoCh01G004190 vs. NCBI nr
Match: gi|659123263|ref|XP_008461571.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo])

HSP 1 Score: 617.5 bits (1591), Expect = 2.0e-173
Identity = 333/413 (80.63%), Postives = 361/413 (87.41%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPSFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFS   LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALRNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL+NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDDKLGVLVNLRHGLSVRLAGSVNFFAIYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSDDKLGVLVN RHG+SVRLAGSVNFFA+YS+SS KIWVFAVKMV  GDG DD+ 
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMV--GDGDDDI- 180

Query: 181 DLKLMRCAVIDCCKPIWSISISFGYLLLGEDNGVRVLNLRPFVRGRGRKVRNLYA----- 240
            LKLMRCAVIDCCKPIWSI+ISFG+LLLGEDNG+RV+NLRPFVRGRGRKVRNL A     
Sbjct: 181 GLKLMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 -KREVHKSFLPHGEVYGTSGGTDLNGGSLFVGNNGLNEHASRSDGAQSSAICNGSLDGKM 300
            KREV KSFLPHG+V GTSGGTDLNGGSL V +NG N  ASRS+ A SSA CNG LDGK 
Sbjct: 241 GKREVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSA-CNGCLDGKF 300

Query: 301 DKHFDSVRSRSVKLRQDSSEGLYFVALKGRGNEDLRSAKMMPLKALSIQALSPRKILILD 360
           DK+  SVR R +KLRQDSSEGLYFVALK R NEDL+SAKMM LKA+SIQALSP+KILILD
Sbjct: 301 DKNSSSVRPRCIKLRQDSSEGLYFVALKRRANEDLKSAKMMSLKAISIQALSPKKILILD 360

Query: 361 SVGDLHLLHLASSANGSDFSYNIRPLPHLMKVQTLTSVPDTSIRNQTVWLSDK 408
           SVGDLHLLHLA++ANG DFS NIRPLPHLMKVQ LTS PDTSI  Q ++  +K
Sbjct: 361 SVGDLHLLHLANAANGFDFSCNIRPLPHLMKVQMLTSFPDTSIIMQAIFSGEK 409

The following BLAST results are available for this feature:

BLAST of CmoCh01G004190 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004190 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WXB1_PRUPE	1.5e-130	56.42	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1	[more]
W9RM69_9ROSA	8.6e-115	51.90	Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1	[more]
V4UWE2_9ROSI	7.3e-114	51.05	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1	[more]
A0A067EV01_CITSI	4.7e-113	50.72	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1	[more]
F6GVQ5_VITVI	4.0e-112	52.15	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00100 PE=4 SV=...	[more]

BLAST of CmoCh01G004190 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmoCh01G004190 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123261\|ref\|XP_008461570.1\|	1.1e-208	82.16	PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo]	[more]
gi\|778680625\|ref\|XP_011651361.1\|	8.9e-206	81.12	PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus]	[more]
gi\|659123257\|ref\|XP_008461569.1\|	7.5e-205	82.07	PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo]	[more]
gi\|778680623\|ref\|XP_011651360.1\|	1.7e-201	80.80	PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus]	[more]
gi\|659123263\|ref\|XP_008461571.1\|	2.0e-173	80.63	PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh01G004190.1	CmoCh01G004190.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37383	FAMILY NOT NAMED	coord: 2..476 score: 1.1E
None	No IPR available	PANTHER	PTHR37383:SF1	SUBFAMILY NOT NAMED	coord: 2..476 score: 1.1E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh01G004190	Cucsa.031630	Cucumber (Gy14) v1	cgycmoB0010
CmoCh01G004190	CmaCh01G003950	Cucurbita maxima (Rimu)	cmacmoB468
CmoCh01G004190	Cla007115	Watermelon (97103) v1	cmowmB431
CmoCh01G004190	Csa3G260210	Cucumber (Chinese Long) v2	cmocuB442
CmoCh01G004190	MELO3C023764	Melon (DHL92) v3.5.1	cmomeB421
CmoCh01G004190	ClCG05G012060	Watermelon (Charleston Gray)	cmowcgB406
CmoCh01G004190	CSPI03G20410	Wild cucumber (PI 183967)	cmocpiB446
CmoCh01G004190	Lsi05G004020	Bottle gourd (USVL1VR-Ls)	cmolsiB430
CmoCh01G004190	Cp4.1LG02g17150	Cucurbita pepo (Zucchini)	cmocpeB449
CmoCh01G004190	Cp4.1LG03g06330	Cucurbita pepo (Zucchini)	cmocpeB453
CmoCh01G004190	MELO3C023764.2	Melon (DHL92) v3.6.1	cmomedB484
CmoCh01G004190	CsaV3_3G020350	Cucumber (Chinese Long) v3	cmocucB0532
CmoCh01G004190	Cla97C05G093960	Watermelon (97103) v2	cmowmbB454
CmoCh01G004190	Bhi01G001440	Wax gourd	cmowgoB0559
CmoCh01G004190	CsGy3G020140	Cucumber (Gy14) v2	cgybcmoB339
CmoCh01G004190	Carg07488	Silver-seed gourd	carcmoB1033

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmoCh01G004190	Cucurbita moschata (Rifu)	cmocmoB203
CmoCh01G004190	Cucurbita maxima (Rimu)	cmacmoB257
CmoCh01G004190	Silver-seed gourd	carcmoB0651