CmaCh01G003950 (gene) Cucurbita maxima (Rimu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmaCh01G003950
Type	gene
Organism	Cucurbita maxima (Cucurbita maxima (Rimu))
Description	Ribosome biogenesis ERB1
Location	Cma_Chr01 : 1998211 .. 2005259 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCTTTACCTTCGTCTGCAACTAGAAATGGAAGAATCCCTTCAATTTTGACCACCCAATTGAAACTTTCGACTTCCGGGTCTTGCATTTCTCAATCGTACACTAACCAAGTGGAGCAGCCAAATCCCAAACCCAAACCCAAACCCAAAGCCCTGAGTTAAGGTTTCTTAACCCAAATCAAAAGAATGCTTCCCTTGAATCTTCATCTTCTTCTTCTTCTACAGCCCCATCGACTCCTCTCTCTTTGAAAGGATTTAAGCGTTTCTGGTGTTAAGATCCTCTAATGGTTGTTGTACAGGCCACCAAGCTTAGCCTCCCTAACCCTTCTCTCTCTTCCCCTCAAATCACTTCCTTTCTCTTTGAACCCCATTCTCTTTCTCTTGCTCTAATGCACTCTGATTCTTCTTTCTCTCTCTACCCTTCATTTTCCCCTTTCTTTCTCTCCTCCCTTCCGTCCCCTCAACTGGTTGTGCCTTCTCCCTCTTCTTCTGCGGCCTTCGTTGCGCTTCTGAATTCTGATTCCAACTCTGATTCTAAAGTTCTGTTTGTGGTCTCTGGCCCCCATCAGGGCGGCTCTCGAATTCTCCTCCGGTTTTATGTTTTGGAGACTTGTAATTTGTTCAGGAGAGTTCGAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATCATAAATTGGGTGTTTTGGTTAATTTTAAACATGGGCTTTCGGTTCGTTTAGCTGGGTCGGTCAATTTCTTCGCCATGTACTCTATTTCGAGCTCCAAGATATGGGTTTTTGCGGTGAAGATGGTGGCCGGCGGTGATGGTAGGGATGATGTGATGGATTTGAAATTGATGAGGTGTGTTGTGATTGACTGCTGCAAACCCATTTGGTCGATTAGCATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGAGTTAGGGTTGTTAATTTGAGGCCTTTTGTGAAAGGGCGTGGTCGAAAAGTTAGAAATCTGAATGCCAAACGTGAAGTCCATAAGTCATTTTTGCCTCATGGAGAAGTAGTTTATGGAACTTCTGGTGGTACCGACTTGAACGGTGGTTCCCTTTTTGTTGGCAACAATGGACTCAACGAACATGCCAGTAAAAGTGATGCTGCTCAAAGTTCAGCCATTTGCAATGGATCCTTGGATGGGAAGTTGGACAAACATTTTGATTCTGGTGAGTTAAGAAATCTATATGACATTTTTTTTTTATTAGCCATATTGGTCGTGTATCCTGGAATTTGGCTAATACTTTGTTGATTTTTTATTCGTTCTGAGAGTTTAATCACAAGTTTAATCCCGGGAGCATTCGCTATGCGTAAGAGTAATTCAAACACTAGGCGTTTGCTGGACTGTGGTGGTTAATTGATGATTATCGTATGTTAACAATGATTTCTTTGTAGGAATTTATCCTTGAACTTAAATTGTGGTAGGAGTTTATTGAGTCTGATCACAGATTGAAAATAATTTATCAGCTTCCATTGGCTTGATACGTGCTGAAGTTTGAGACTGAGCGATAAAAGTTTGAGGAGTTTGGAACAATGCTTTATTCGAAGTGAATGCTTTTAGTAACTGCAGGAGTGTCCAAGAAAGCTTGCTTCATTATAAATGAAGGAGACGAGAGAAATCTATCGAGTTGGTATCGAGTTGCTGCATTGGTAGGGGAGGTTGAATTGAAACAATATCTAAATCGAGATTTCTGCCAATTATAATGTGAAGCTCAATGATCCATGGGATATGAAATAAAGCCTTCCTTGTTGGGTATCGCAGATAGACATATCGTTTTTTTTAGCTGATTCATTTTGGATGGATACATGCAACATTTCTTTAACTGTGGCCAGCTACCTGATTTGCACTCAAAATACTTTTCATGACAACAACATATGTTTGATCTATTATATTAGCTAACGACTTGTTTTTTAGGTTTTCCTTATATGGCCCGGACATGGGTGCTGAAGGTGCCGTCCTTTGGTTTATTTCATAAGGATGCCTCTAGATGGTAAATTACTGATTGTTAAAGAGGTTTAACTTGGATAGTTCATTCATATCTAAAAAAAACTTGGACAGTTCACCTATTTTCCACTTGAAACGAAATCCTTAGCTGGAGTGACGATCTTTGTTTTTCAATGTCTATTGTATTATTATTATTGCTATAATTTCTGGATCTCGTTCATGCCAAAACATTGTAGTTGTCAAGTTGTTGGCATATGCCTCTGATCGTGTATTTTTAATTGCAGTGAGATCAAGATCTGTAAAATTGAGACAAGATTCGAGTGAAGGAGGACTATATTTTGTGGCGCTGAAGGGCAGAGGAATTGAAGAACTGAGATCTGCAAAAATGATGCCATTAAAGGCATTATCAATTCAAGCACTTTCTCCCAGGAAAATCTTAATCCTGGACTCTGTTGGTGGTTTACATCTGCTGCACCTTGCTAGCAGTGCTACTGGATCAGATTTTTCTTACAACATTCGACCATTGCCTCATCTAATGAAAGTTCAAACGCTGACCAGCGTTCCTGATACATCCATAAGTATGCTTGTCCGAATTCTATGTTCTATACGTTTCTTCTCTTTGCTACCTTTTCAAAGGATTCTCCTTGTTTTTAGTCATTCTATTAGGTGCTTGAAAGAGAGAAAAAATATACTGGAAGGTTGGCCGAAGTAGTTTGTACAAGTGTGAGCCTTGGAGGAACCCCAAGATGCCCAATTTGATTGGGCCACTATGTTGCATTCTCTGTAGGCAGGTGTCAAAGGACATCGATCATATCCTATGGAGCTGTAATTTACCCCATGCTGTTTAGAGCAAACAAGGAGTTCGGCTTGAGTTTGAATAGACATAGGGGTTTCAAAGAGATGATTGAGGAGTTTAGTCTCTACCCTCCATTCCCGAGAAAGAAAGGTTTTCGTGGCAGGCTACGGAGTGTGTTGTTTTATGGGGCCTGCGAAGGGAAAAGAATAATAGAGTCTTTTGAGGGCTTGAGAGGTGTTAAAGTGATGTTTGGCTTGTTGCTATTTCACAACTCAGAACTAATAGAAATATAATACTTTTGCAGGGAATCAAACTGTCTGGCTATCTGACAAGCAACATTCAGTGCATATGATGATGATACCTGATGTTGATTCTGATGTCACTGAAAATAGGGGAAATGAGATCGAGGAAGTCCCGATGAAAAAAATATCAGGTCTCTATCGATGCAGATGTTTCGGGTTATAACTTATTGGTCTGAATAATATTTGTATTATCAAGAACTAGGAATTGCGTATATGCTCAACTTAGTCCCAACTTTGGGTTGTTTTTATTGCCAGATATGCAAGTTATATTTGCTGGTGAAAAGATTCAAGATATAACATCCTTGAGTGCGAATGCTGTTTTAATTCTTGGACAAGGTAATTTCTTGTTATTCGTATCGAAATTCCTGCAAACACTTTCTCGTTGTATGTGAAAAAATTGCTTGTGTTTTAAAGATTATGTTGCAAATGGAACTACCCTGCCTGCTATTTTGAGTGCCTGTAGTGTTTGATTGGCTGCCAAACACCATCTTATTTTAAGAAAAAGTGATTTAATTTTTTAAGATACTTTCTGCATATTCGGAAAAGGATCCCAAGCGCACTACTAGTTTGGATTTGGTGGAATCAATATAGAGAGACTTTTATCCAGTTTAACCATGGGTTGTAGTTTCAAAACGTGGAGGCTCGGGGACATGAGAAACTTTGTGTGCATCCTAGTTACGTCATGTATGTTTTTAGGGTCAACTGGTAGTTCCCTTTTGCCTTTTCTAATCCAATGATCCATCAAGGGTTGGAGAGCTTTCTTTCATGGCTACTATTATATTTCTCTAATTGTAACTCCAGCCACGTACTCTGTAAATAGGACTGCTGGTTGTAATCTAATGGTGATGATTTCTAATGAAATTTAATTGTTGAGAAACTAAGTGGCATCTTGGGTAGAGCTATGGTCTTCTCCTCAGCCCAAGCCTACTGCTAACAAATATTGTCCGCTTTGGCCTGTTAAGTATCACCGTCAGCTTCACGGTTTTAAAACGCCTTTGCTAGGAAGAGGTTTCCACACGCTTATAAAGAATGCTTCGTTCTCCTTTACAGCCGATGTGGGATCTCACAATCTACCCTCTTTCAGGGCCTATTGTCCTAGCTGACACTCGTTCCCTTCTCCAATCGATGTGATACCCCCTAATTCCACCCCCCTTTAGGCCTTGCGTCCTTGCTGGCACACTGCATCATGTCCACCCCCTTTTGGGGCTCAGCCTCCTCGTTGGCACATCGCCCAGTGGGACTCTGATGCCAATAGCCCAAGTCCACCACTAGTAGATATTGTCCGCTTTGGCCCATTGCGTATCGCCGCTATGGGATCTCACAATCCACCCTCCTTTGGGGCCCAGTGTCTTCACTGACACTTGTTCCCTTCTCCAATCGATGTGAGACCCCCCAATCCACCCCCCTTCGGGGCCCATCGTCCTTGCATGTCCACCCCCTTCAGGGCTCAGTCTCCTCGTTGGCACATCGCTCAGTGTGGCTTTGATACCATTTGTAATGACTGAAACCCACCCCTAGCAGATATTGTCCTTTTTGGACTTTTCCTTTCGGGCTTCCCCTCAAGGATTTTAAGACACATCTACTAGGGAGAGGTTTCCACACCCTTATAAAGAATGCTTCGTTCTCCTCCCCAACCAATGTGGAATCTCACACCTCAAAAAAGTGATCAAAGTTGCTTCTACTATTGGAGGTTTCAAGTGATAATTAGACCCTCAGCTGTGCATCCTCTTTATATGGAGACGGTTAGGGAAATCAAGGTGTGTTCTAAGGTTAGGACAAGAAGATTATTACTATAAACAATTAGGAAAATCTAGAGGGATTAGGCAAAAGGATAGGGTGCTACTTTGGCCAGCTATAGAAACGAAAAGGAACGAGAGAGGGGATCTTTGTTCTAAGGCTTGCTTCGTTGGCTTTTTTTGACCTTGTATTTCTTATAGCTTCAGGTTGGAATGCTGTCCCCATAGTCTTGTAATTCTTCATTTTCAATCAACTTGTTTGCAAAAATGACCATGTGAATTTCCATCAATTAAATTTTCCCTATAATTGAATCATACACATGTTAGCTTGTAAAACTCGACAATAATGTCCTGTATTCTTATATACAAATAAAGAGAAGAAAGAAATGAAAAAAAGACGAGGGAAGTCGAACATAAATTATAGAAAAAAAAGTTGGATGAAAAAAGGAAAAATACTGCGGCCAAGGAACATTATATACTTTTCAAGTTTTATTCTTTGTTCTTTATCATGGCATTTTCTTCTCTTGTTAACAATGTTCATTTCTGTTAAGCAGGCAGCTTATATGCGTATACAATTTCCTGAAGTTTCCTCGGTGCCATTTTTAAGGGTAAGCAGCTTCTTATCTAGTTGCACGTTTCCTCATGCATGCGCTTGAATGTTCATTTTTCGTTCTTGGTTATTTGTAGGACATTTTTCATTCAAGGCTGTGTTAGATGATCTCGTCCAGAGTGGTGGCTTCTTGGCTTCATGTTGTGCTCAAGTAAGAAACTGACCTATTCTACAAGTTAGTTCATGGTGGCTTCTTGGTTCCTAATTATTGTGTTACTGTACTGCAGTTTTCTCACATGTCCATGGTGAATAAGATTCAAGAAGACAGCTCTGAATAGGTATGTTTTTATCTTTATTCAATTTTTTATTATTGAGAAATTGGTTGAAGAGGGGAACGAAGCACCCTTTGGGTGTGGAAACTTCTCTCTAATAGACGTGTTTTAAAACTGTGAGGCTAACGATGATATGTAACGAGCCAAAGCGGACAATATTTGTTAGCGGTGGGCTTGGGCTGTTACAAATGGTATCCGAGCCAAACTCTAGGCGGTGTGCCAGCGAGGACGCTGGCTCCCAAGGAGGGTGGATTGTGAGATCCCACATTGATTGGAGAGAGTAACAAAACATCCTTTATAAGGGTGTGGGAACCTCTCTCTAAGAGATTCATTTTAAAACCGTGAGGCTGACGACGATAATGTAACGGGCCAAAGTGAACAATATCTGTTAGCGGTGGTTTACTTGTAAAGCTTTTAGGGTCCTTATCTGTTTTATTTTCATATATATATATATATTTTGGTCTTTGTGATGCTATTGGTGGTTTATAACCTGTTTTGAACATCCGTCTATCGTAATGAAGTTCTCGTCGCTCAGTTTTCTTTGAAAGGACTGAATCTATTCTGCCTCGAGAGACAATTTCAGTGAATTAATCTAATTTTTGCTTCTATATACGTTCACAATCTTCCAGACTTATTTTGCATCAAGAGTATCTAATATTATTATTTGTCTGATTGAGATCTGTGGTCTATGGCACAGGACAATGCTTTGGGAATATTCGTTATTGAAGTTCTGAAATTCTGAATATGGAAGTCTTTCAACCCAATAGGGAATAATGCACATGTGATGGAAGTCTTTCAACAGAATAGAGCCACCCCATCTGCTTAGCCTTGGCCTTGCATCCATGAGCTGCAAGACAAGTTTGGGGCCAAGAAACGAGCATTCTAGCCATTGGTACGTCTGTTTCGTTGCATCTTGGTTCAACTCGCAGACAGAATATCGTATATTTATTCAATCCGCTATCATGAAAGATACAACACATCAGAGACCTTGAGCTGGGTTTAGTGTTGCAAGATGAATATCATAATTGCATGAAACCTTCATAACTCGCAACATTCTAGTTTGAATCTATATATGCATCTACGACTCGTTCTCATTCGGGAATGTAGCCTGCTTTCGTCCTAATATTAGCTTTCTTTTCTTTTCATCAGATGAAACACATTTTCTCTCAGAGATGACTGTTTTGAGAACTTTTTACTGTGTTTAGACTGCTAAATCTGCATTTGTTCTGTTCATCATTCAAATTTTTGTTACAGTTCTATGAGTTCCTCAGCCAAATGAAGTGAAAGTTGTTTGTGTGAAAGGGCAATGGAAGCCCATAGCCCCAGAACAGAGCCTCTGTTTTTCATGGGATTGCATTTAGATGAGACAG

mRNA sequence

TTTCTTTACCTTCGTCTGCAACTAGAAATGGAAGAATCCCTTCAATTTTGACCACCCAATTGAAACTTTCGACTTCCGGGTCTTGCATTTCTCAATCGTACACTAACCAAGTGGAGCAGCCAAATCCCAAACCCAAACCCAAACCCAAAGCCCTGAGTTAAGGTTTCTTAACCCAAATCAAAAGAATGCTTCCCTTGAATCTTCATCTTCTTCTTCTTCTACAGCCCCATCGACTCCTCTCTCTTTGAAAGGATTTAAGCGTTTCTGGTGTTAAGATCCTCTAATGGTTGTTGTACAGGCCACCAAGCTTAGCCTCCCTAACCCTTCTCTCTCTTCCCCTCAAATCACTTCCTTTCTCTTTGAACCCCATTCTCTTTCTCTTGCTCTAATGCACTCTGATTCTTCTTTCTCTCTCTACCCTTCATTTTCCCCTTTCTTTCTCTCCTCCCTTCCGTCCCCTCAACTGGTTGTGCCTTCTCCCTCTTCTTCTGCGGCCTTCGTTGCGCTTCTGAATTCTGATTCCAACTCTGATTCTAAAGTTCTGTTTGTGGTCTCTGGCCCCCATCAGGGCGGCTCTCGAATTCTCCTCCGGTTTTATGTTTTGGAGACTTGTAATTTGTTCAGGAGAGTTCGAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATCATAAATTGGGTGTTTTGGTTAATTTTAAACATGGGCTTTCGGTTCGTTTAGCTGGGTCGGTCAATTTCTTCGCCATGTACTCTATTTCGAGCTCCAAGATATGGGTTTTTGCGGTGAAGATGGTGGCCGGCGGTGATGGTAGGGATGATGTGATGGATTTGAAATTGATGAGGTGTGTTGTGATTGACTGCTGCAAACCCATTTGGTCGATTAGCATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGAGTTAGGGTTGTTAATTTGAGGCCTTTTGTGAAAGGGCGTGGTCGAAAAGTTAGAAATCTGAATGCCAAACGTGAAGTCCATAAGTCATTTTTGCCTCATGGAGAAGTAGTTTATGGAACTTCTGGTGGTACCGACTTGAACGGTGGTTCCCTTTTTGTTGGCAACAATGGACTCAACGAACATGCCAGTAAAAGTGATGCTGCTCAAAGTTCAGCCATTTGCAATGGATCCTTGGATGGGAAGTTGGACAAACATTTTGATTCTGTGAGATCAAGATCTGTAAAATTGAGACAAGATTCGAGTGAAGGAGGACTATATTTTGTGGCGCTGAAGGGCAGAGGAATTGAAGAACTGAGATCTGCAAAAATGATGCCATTAAAGGCATTATCAATTCAAGCACTTTCTCCCAGGAAAATCTTAATCCTGGACTCTGTTGGTGGTTTACATCTGCTGCACCTTGCTAGCAGTGCTACTGGATCAGATTTTTCTTACAACATTCGACCATTGCCTCATCTAATGAAAGTTCAAACGCTGACCAGCGTTCCTGATACATCCATAATGCATATGATGATGATACCTGATGTTGATTCTGATGTCACTGAAAATAGGGGAAATGAGATCGAGGAAGTCCCGATGAAAAAAATATCAGATATGCAAGTTATATTTGCTGGTGAAAAGATTCAAGATATAACATCCTTGAGTGCGAATGCTGTTTTAATTCTTGGACAAGGACATTTTTCATTCAAGGCTGTGTTAGATGATCTCGTCCAGAGTGGTGGCTTCTTGGCTTCATGTTGTGCTCAAGACAATGCTTTGGGAATATTCGTTATTGAAGTTCTGAAATTCTGAATATGGAAGTCTTTCAACCCAATAGGGAATAATGCACATGTGATGGAAGTCTTTCAACAGAATAGAGCCACCCCATCTGCTTAGCCTTGGCCTTGCATCCATGAGCTGCAAGACAAGTTTGGGGCCAAGAAACGAGCATTCTAGCCATTGGTACGTCTGTTTCGTTGCATCTTGGTTCAACTCGCAGACAGAATATCGTATATTTATTCAATCCGCTATCATGAAAGATACAACACATCAGAGACCTTGAGCTGGGTTTAGTGTTGCAAGATGAATATCATAATTGCATGAAACCTTCATAACTCGCAACATTCTAGTTTGAATCTATATATGCATCTACGACTCGTTCTCATTCGGGAATGTAGCCTGCTTTCGTCCTAATATTAGCTTTCTTTTCTTTTCATCAGATGAAACACATTTTCTCTCAGAGATGACTGTTTTGAGAACTTTTTACTGTGTTTAGACTGCTAAATCTGCATTTGTTCTGTTCATCATTCAAATTTTTGTTACAGTTCTATGAGTTCCTCAGCCAAATGAAGTGAAAGTTGTTTGTGTGAAAGGGCAATGGAAGCCCATAGCCCCAGAACAGAGCCTCTGTTTTTCATGGGATTGCATTTAGATGAGACAG

Coding sequence (CDS)

ATGGTTGTTGTACAGGCCACCAAGCTTAGCCTCCCTAACCCTTCTCTCTCTTCCCCTCAAATCACTTCCTTTCTCTTTGAACCCCATTCTCTTTCTCTTGCTCTAATGCACTCTGATTCTTCTTTCTCTCTCTACCCTTCATTTTCCCCTTTCTTTCTCTCCTCCCTTCCGTCCCCTCAACTGGTTGTGCCTTCTCCCTCTTCTTCTGCGGCCTTCGTTGCGCTTCTGAATTCTGATTCCAACTCTGATTCTAAAGTTCTGTTTGTGGTCTCTGGCCCCCATCAGGGCGGCTCTCGAATTCTCCTCCGGTTTTATGTTTTGGAGACTTGTAATTTGTTCAGGAGAGTTCGAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATCATAAATTGGGTGTTTTGGTTAATTTTAAACATGGGCTTTCGGTTCGTTTAGCTGGGTCGGTCAATTTCTTCGCCATGTACTCTATTTCGAGCTCCAAGATATGGGTTTTTGCGGTGAAGATGGTGGCCGGCGGTGATGGTAGGGATGATGTGATGGATTTGAAATTGATGAGGTGTGTTGTGATTGACTGCTGCAAACCCATTTGGTCGATTAGCATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGAGTTAGGGTTGTTAATTTGAGGCCTTTTGTGAAAGGGCGTGGTCGAAAAGTTAGAAATCTGAATGCCAAACGTGAAGTCCATAAGTCATTTTTGCCTCATGGAGAAGTAGTTTATGGAACTTCTGGTGGTACCGACTTGAACGGTGGTTCCCTTTTTGTTGGCAACAATGGACTCAACGAACATGCCAGTAAAAGTGATGCTGCTCAAAGTTCAGCCATTTGCAATGGATCCTTGGATGGGAAGTTGGACAAACATTTTGATTCTGTGAGATCAAGATCTGTAAAATTGAGACAAGATTCGAGTGAAGGAGGACTATATTTTGTGGCGCTGAAGGGCAGAGGAATTGAAGAACTGAGATCTGCAAAAATGATGCCATTAAAGGCATTATCAATTCAAGCACTTTCTCCCAGGAAAATCTTAATCCTGGACTCTGTTGGTGGTTTACATCTGCTGCACCTTGCTAGCAGTGCTACTGGATCAGATTTTTCTTACAACATTCGACCATTGCCTCATCTAATGAAAGTTCAAACGCTGACCAGCGTTCCTGATACATCCATAATGCATATGATGATGATACCTGATGTTGATTCTGATGTCACTGAAAATAGGGGAAATGAGATCGAGGAAGTCCCGATGAAAAAAATATCAGATATGCAAGTTATATTTGCTGGTGAAAAGATTCAAGATATAACATCCTTGAGTGCGAATGCTGTTTTAATTCTTGGACAAGGACATTTTTCATTCAAGGCTGTGTTAGATGATCTCGTCCAGAGTGGTGGCTTCTTGGCTTCATGTTGTGCTCAAGACAATGCTTTGGGAATATTCGTTATTGAAGTTCTGAAATTCTGA

Protein sequence

MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQLVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVCTQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDVMDLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLNAKREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGKLDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILILDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSIMHMMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGHFSFKAVLDDLVQSGGFLASCCAQDNALGIFVIEVLKF

Homology

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BLAST of CmaCh01G003950 vs. TrEMBL
Match: M5WXB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1)

HSP 1 Score: 458.0 bits (1177), Expect = 1.5e-125
Identity = 265/485 (54.64%), Postives = 334/485 (68.87%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQ 60
           MVVVQA+KL LPNPSLSSP ITS LFEPHSLSLALMHSDS+ SLYPS SP  LSSLP PQ
Sbjct: 27  MVVVQASKLRLPNPSLSSPNITSLLFEPHSLSLALMHSDSTLSLYPSISPLSLSSLPPPQ 86

Query: 61  LVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
            ++  PSSS+ F+ L N + N +++VLF+VSGP++GGS++LLRFY+L     F R +VVC
Sbjct: 87  TLIAPPSSSSTFLLLQNPNPNPNTRVLFIVSGPYRGGSQVLLRFYILHKQKQFVRAQVVC 146

Query: 121 TQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRD-DV 180
           TQK+L+ D KLGVLV+  HG+S++LAGSVNFFAMYS+SSSKIWVFAVK +   D  D D 
Sbjct: 147 TQKELQFDQKLGVLVDAHHGVSIKLAGSVNFFAMYSVSSSKIWVFAVKSIDNDDNDDNDG 206

Query: 181 MDLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLN--AKR 240
           M +KLMRC VI+CCK +WSISISFGFL+LGEDNGVRV NLR  VKGR RK + LN  +K 
Sbjct: 207 MVVKLMRCAVIECCKLVWSISISFGFLILGEDNGVRVFNLRQLVKGRVRKAKLLNSSSKT 266

Query: 241 EVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGKLDK 300
           E     LP+G  V G    +DL       G+ G N++        S   CNG L GK D+
Sbjct: 267 EGRNLCLPNG--VIGDHAHSDL-------GDKG-NKYGGGKFHGTSEIPCNGDLCGKNDR 326

Query: 301 HFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILILDS 360
           ++ S + RSVKLRQDS E G+ FV  KG+  E  +S +M+P KA+SI+ALSP K LILDS
Sbjct: 327 NYVSAKQRSVKLRQDSPEEGVCFVTFKGKEFETSKSTRMIPAKAISIEALSPNKFLILDS 386

Query: 361 VGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDT-------------SIMHMMM 420
            G L +LH++S   GS+ +  +R LPH+MKVQ L  +PD              + +HMM+
Sbjct: 387 NGALRILHISSPVLGSNITSYLRELPHIMKVQKLAVLPDIASRTQSVWASDGFNSVHMML 446

Query: 421 IPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGHFSFKAV 470
             D+D+   EN  N+ EE  +  IS +  IFA EKIQD+  L+ANA+LILGQG+  F + 
Sbjct: 447 ASDMDNAGNENDRNDSEE-KLIHISVVLTIFASEKIQDLIPLAANAILILGQGNMWFSSF 500

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BLAST of CmaCh01G003950 vs. TrEMBL
Match: W9RM69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1)

HSP 1 Score: 402.1 bits (1032), Expect = 9.6e-109
Identity = 249/490 (50.82%), Postives = 321/490 (65.51%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFL-SSLPSP 60
           MVVVQA+KL+LPNPSLSSP ITS LFEP SLSLALMHSDSSFSLYPS SP  + SSLP P
Sbjct: 1   MVVVQASKLNLPNPSLSSPHITSLLFEPTSLSLALMHSDSSFSLYPSLSPLRISSSLPPP 60

Query: 61  QLVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVV 120
           Q  VP+P SS+ FV L N +S ++ + LFV SGPH GGSRILLRFY+L+   LF + RVV
Sbjct: 61  QTTVPAPCSSSTFVLLQNPNS-AEPRPLFVASGPHAGGSRILLRFYILQGKKLFHKARVV 120

Query: 121 CTQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDV 180
           C QKD +   + GVLV+  HG+SV+LAGSVNFFAMYS+S SK W+FAVK+V      DD 
Sbjct: 121 CNQKDFQFVERFGVLVDSVHGVSVKLAGSVNFFAMYSVSGSKAWIFAVKLV------DDE 180

Query: 181 MDLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNL--NAKR 240
           + +KLMRC VI+C KP++SI++SFG L+LGE+ GVRV NLR  VKGR +KV+NL  N+K 
Sbjct: 181 V-VKLMRCAVIECSKPVFSITLSFGVLILGEEWGVRVFNLRQLVKGRAKKVKNLQPNSKS 240

Query: 241 EVHKSFLPHGEVVYGTSGGTDLNGG-SLFVGNNGLNEHASKSDAAQSSAICNGSLDGKLD 300
           +  KS LP+G +      G D+ G    +V + G +          S   CN  LDGK +
Sbjct: 241 DGRKSRLPNGVI------GADVLGDLKDYVHSEGGDRCGKCVIEGSSERTCNCYLDGKSN 300

Query: 301 KHFDS-----------------VRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPL 360
           +H  S                 V+ R+V+LRQDSSE G  F+A  G+ +E  +S  +  +
Sbjct: 301 RHLVSDNIVNFAHVANQVVEHAVKQRAVRLRQDSSEAGACFLAFSGKDVEASKSRVITSV 360

Query: 361 KALSIQALSPRKILILDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI 420
           KA+SIQALSP+K LILDS G LHLL   +  TGSD + +IR LP +  VQ L  + D+SI
Sbjct: 361 KAISIQALSPKKFLILDSAGNLHLLCWFNRVTGSDMTPHIRQLPQVTNVQKLAVLADSSI 420

Query: 421 -------------MHMMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSL 457
                        +H++   D+ + V+EN   E EE  + +IS +Q IFA EKI+D+  L
Sbjct: 421 RTQTVWLSDGHHSLHVVAASDIVAAVSENDRTENEE-KLMQISVIQAIFASEKIEDVIPL 475

[Close]

BLAST of CmaCh01G003950 vs. TrEMBL
Match: V4UWE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 9.0e-107
Identity = 237/477 (49.69%), Postives = 315/477 (66.04%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSS--PQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPS 60
           +V+ +A+KLSLPNPSL S  PQITS L+EP+SLSLALMHSDSS SLY S S F LSSLPS
Sbjct: 2   VVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMHSDSSISLYSSISLFTLSSLPS 61

Query: 61  -PQLVVPSPSSSAAFVALLNSDS-NSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRV 120
            PQ+++PSPS S  F+ L ++ + N   +V F+  GPH+   +++LR YVL+  N + + 
Sbjct: 62  TPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGKA 121

Query: 121 RVVCTQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGR 180
           +V C QK +  D KLGVL++  HGL ++L GSVNFFAMYS+SSSKIWVF VK++  GDG 
Sbjct: 122 QVFCKQKGVSFDEKLGVLLDINHGLGLKLVGSVNFFAMYSLSSSKIWVFGVKLM-DGDG- 181

Query: 181 DDVMDLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLNAK 240
           DD + +KLMRC VI+CCKP+WS+S+SFGF++LGEDNGVRV+NLR  VKG+ +K++N    
Sbjct: 182 DDGVRVKLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN---- 241

Query: 241 REVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGKLD 300
                S LP+G                  +G+ G        D       CNG LD K+D
Sbjct: 242 -----SSLPNG-----------------IIGDYGF-------DGPTERIACNGYLDEKID 301

Query: 301 KHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKM--MPLKALSIQALSPRKILI 360
           KH  SV+ RSVK +QDS EGG  F+A + + +E L+S KM  M LKA+SIQA+S +K LI
Sbjct: 302 KHSVSVKQRSVKYKQDSDEGGACFLAFRMKEVEGLKSTKMPLMSLKAISIQAVSLKKFLI 361

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI-------------MH 420
           LDS G LH+LHL+S   GS+   +IR LPH+M VQ L   PD S+             ++
Sbjct: 362 LDSSGNLHMLHLSSPVAGSNIIGHIRQLPHVMNVQKLAVHPDISLRTQTIWITDGYHSVN 421

Query: 421 MMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGH 459
           +M+  D+D+   EN  NE EE  + + S ++ IF GEKIQD+  L+AN +LILGQG+
Sbjct: 422 VMVSSDMDAADNENGRNESEE-NLTQCSVIEAIFVGEKIQDLVPLAANGLLILGQGN 442

[Close]

BLAST of CmaCh01G003950 vs. TrEMBL
Match: A0A067EV01_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 5.4e-104
Identity = 233/477 (48.85%), Postives = 312/477 (65.41%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSS--PQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPS 60
           +V+ +A+KLSLPNPSL S  PQITS L+EP+SLSLALM SDSS SLY S S F LSSLPS
Sbjct: 2   VVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMRSDSSISLYSSISLFTLSSLPS 61

Query: 61  -PQLVVPSPSSSAAFVALLNSDS-NSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRV 120
            PQ+++PSPS S  F+ L ++ + N   +V F+  GPH+   +++LR YVL+  N + + 
Sbjct: 62  TPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGKA 121

Query: 121 RVVCTQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGR 180
           +V C QK +  D KLGVL++  HG+ ++L GSVNFFAM+S+SSSKIWVF V M+  GDG 
Sbjct: 122 QVFCKQKGVSFDEKLGVLLDITHGVGLKLVGSVNFFAMHSLSSSKIWVFGV-MLMDGDG- 181

Query: 181 DDVMDLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLNAK 240
           DD + + LMRC VI+CCKP+WS+S+SFGF++LGEDNGVRV+NLR  VKG+ +K++N    
Sbjct: 182 DDGVRVNLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN---- 241

Query: 241 REVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGKLD 300
                S LP+G                  +G+ G        D       CNG LD K+D
Sbjct: 242 -----SSLPNG-----------------IIGDYGF-------DGPTERIACNGYLDEKID 301

Query: 301 KHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKM--MPLKALSIQALSPRKILI 360
           KH  SV+ RSVK +QDS EGG  F+A + + +E L+S KM  M LKA+SIQA+S +K LI
Sbjct: 302 KHSVSVKQRSVKYKQDSDEGGACFLAFRMKEVEGLKSTKMPLMSLKAISIQAVSLKKFLI 361

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI-------------MH 420
           LDS G LH+LHL+S   GS+   +IR LPH+M VQ L   PD S+             ++
Sbjct: 362 LDSSGNLHMLHLSSPVAGSNIIGHIRQLPHVMNVQKLAVHPDISLRTQTIWITDGYHSVN 421

Query: 421 MMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGH 459
           +M+  D+D+   EN  NE EE  + + S ++ IF GEKIQD+  L+AN +LILGQG+
Sbjct: 422 VMVASDMDAADNENGRNESEE-NLTQCSVIEAIFVGEKIQDLVPLAANGLLILGQGN 442

[Close]

BLAST of CmaCh01G003950 vs. TrEMBL
Match: F6GVQ5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00100 PE=4 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 7.9e-103
Identity = 242/482 (50.21%), Postives = 302/482 (62.66%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSS-PQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSP 60
           M  VQA KLSLP PS SS P ITS LFEPHS SLALMHSDSSFSLYPS SPF   S PSP
Sbjct: 12  MFEVQACKLSLPRPSFSSLPPITSLLFEPHSNSLALMHSDSSFSLYPSLSPF---SPPSP 71

Query: 61  Q------LVVPSPSSSAAFVALLNSDSNSDS---KVLFVVSGPHQGGSRILLRFYVLETC 120
           Q       +VP PSS A F+ L N   NS +   +VLFVV+ PH+ G+ ++LRFYVL+  
Sbjct: 72  QSQAPTLTLVPPPSSFATFLLLQNPRPNSGAHNPRVLFVVAAPHRAGAAVILRFYVLQKT 131

Query: 121 NLFRRVRVVCTQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMV 180
            LF +  V+CTQ+DL+ D KLGVL N  HG+SV+L GS+N FAMYS+S+SKIWVF+VKM 
Sbjct: 132 QLFTKAEVLCTQRDLQFDPKLGVLFNANHGVSVKLGGSINIFAMYSVSNSKIWVFSVKM- 191

Query: 181 AGGDGRDDVMDLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKV 240
             GD RDD + LKL +C VIDC  P++SIS+S  FL+LGE+NGVRV  LRP VKG  RK 
Sbjct: 192 -AGDDRDDGVVLKLRKCAVIDCGVPVFSISVSGEFLILGEENGVRVFQLRPLVKGWIRK- 251

Query: 241 RNLNAKREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGS 300
                +RE      P+G      S G + N                          CNG 
Sbjct: 252 ----EQRESKNLNFPNG--CGSKSAGVEAN----------------------MEIACNGD 311

Query: 301 LDGKLDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRS--AKMMPLKALSIQALS 360
           L+G+ D H  SV+ RSV+ RQDSSEG   FVA KG+ +  L+S    ++P+KA+SIQALS
Sbjct: 312 LEGRTDLHRVSVKRRSVRFRQDSSEGSACFVAFKGKEVGHLKSMMPPLIPVKAVSIQALS 371

Query: 361 PRKILILDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI--------- 420
            +K LILDS G +HLL L+    GS+ + ++R   + MKVQ L  +PDTS          
Sbjct: 372 AKKFLILDSDGDVHLLCLSIYHLGSEITCHMRQFTNTMKVQKLAVLPDTSTRGRTVWISD 431

Query: 421 ----MHMMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILG 458
               +HMM + D D+   E+  N+ EE  +K+IS  Q IFA E+IQDI  L+ANA+LILG
Sbjct: 432 GFYSVHMMTVSDTDTSANEDDENDSEE-KLKQISVTQAIFASERIQDIIPLAANALLILG 458

[Close]

BLAST of CmaCh01G003950 vs. NCBI nr
Match: gi|659123257|ref|XP_008461569.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo])

HSP 1 Score: 671.4 bits (1731), Expect = 1.2e-189
Identity = 378/502 (75.30%), Postives = 413/502 (82.27%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFS   LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSD KLGVLVNF+HG+SVRLAGSVNFFAMYS+SS KIWVFAVKMV  GDG DD+ 
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMV--GDGDDDI- 180

Query: 181 DLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLNA----- 240
            LKLMRC VIDCCKPIWSI+ISFGFLLLGEDNG+RVVNLRPFV+GRGRKVRNLNA     
Sbjct: 181 GLKLMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 -KREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGK 300
            KREV KSFLPHG+V  GTSGGTDLNGGSL V +NG N  AS+S+ A SSA CNG LDGK
Sbjct: 241 GKREVQKSFLPHGDVC-GTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSA-CNGCLDGK 300

Query: 301 LDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILI 360
            DK+  SVR R +KLRQDSSE GLYFVALK R  E+L+SAKMM LKA+SIQALSP+KILI
Sbjct: 301 FDKNSSSVRPRCIKLRQDSSE-GLYFVALKRRANEDLKSAKMMSLKAISIQALSPKKILI 360

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI-------------MH 420
           LDSVG LHLLHLA++A G DFS NIRPLPHLMKVQ LTS PDTSI             +H
Sbjct: 361 LDSVGDLHLLHLANAANGFDFSCNIRPLPHLMKVQMLTSFPDTSIRNQTVWLSDGNHSVH 420

Query: 421 MMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGHFSF 480
           +M+IPDVDS V EN GNE EEV MK+IS MQ IF+GEKIQDITSL+ANAVLILGQG  S+
Sbjct: 421 IMVIPDVDSVVPENMGNESEEVLMKRISVMQAIFSGEKIQDITSLAANAVLILGQGPHSW 480

[Close]

BLAST of CmaCh01G003950 vs. NCBI nr
Match: gi|659123261|ref|XP_008461570.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo])

HSP 1 Score: 667.9 bits (1722), Expect = 1.3e-188
Identity = 372/476 (78.15%), Postives = 403/476 (84.66%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFS   LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSD KLGVLVNF+HG+SVRLAGSVNFFAMYS+SS KIWVFAVKMV  GDG DD+ 
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMV--GDGDDDI- 180

Query: 181 DLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLNA----- 240
            LKLMRC VIDCCKPIWSI+ISFGFLLLGEDNG+RVVNLRPFV+GRGRKVRNLNA     
Sbjct: 181 GLKLMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 -KREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGK 300
            KREV KSFLPHG+V  GTSGGTDLNGGSL V +NG N  AS+S+ A SSA CNG LDGK
Sbjct: 241 GKREVQKSFLPHGDVC-GTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSA-CNGCLDGK 300

Query: 301 LDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILI 360
            DK+  SVR R +KLRQDSSE GLYFVALK R  E+L+SAKMM LKA+SIQALSP+KILI
Sbjct: 301 FDKNSSSVRPRCIKLRQDSSE-GLYFVALKRRANEDLKSAKMMSLKAISIQALSPKKILI 360

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI-------------MH 420
           LDSVG LHLLHLA++A G DFS NIRPLPHLMKVQ LTS PDTSI             +H
Sbjct: 361 LDSVGDLHLLHLANAANGFDFSCNIRPLPHLMKVQMLTSFPDTSIRNQTVWLSDGNHSVH 420

Query: 421 MMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQG 458
           +M+IPDVDS V EN GNE EEV MK+IS MQ IF+GEKIQDITSL+ANAVLILGQG
Sbjct: 421 IMVIPDVDSVVPENMGNESEEVLMKRISVMQAIFSGEKIQDITSLAANAVLILGQG 470

[Close]

BLAST of CmaCh01G003950 vs. NCBI nr
Match: gi|778680623|ref|XP_011651360.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus])

HSP 1 Score: 660.6 bits (1703), Expect = 2.1e-186
Identity = 370/484 (76.45%), Postives = 402/484 (83.06%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFSP  LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSD KLGV VNF+HG+SVRLAGSVNFFAMYS+SS KIWVFAVKMV  GDG DD +
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV--GDG-DDGI 180

Query: 181 DLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNL------N 240
            LKLMRC VIDCCKPIWS++ISFGFLLLGEDNG+RVVNLRPFV+GRGRKVRNL      N
Sbjct: 181 GLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 AKREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGK 300
           AKREV KSFLPH +V  GTSGG DLNGGSL V +NG N  AS+S+ A  S  CNG LDGK
Sbjct: 241 AKREVQKSFLPHVDVC-GTSGGNDLNGGSLVVSSNGFNLQASRSEDA-GSLSCNGCLDGK 300

Query: 301 LDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILI 360
           LDK   SVR R +KLRQDSSE GLYFVALKGRG E L+SAKMM LKA+SIQALSP+KILI
Sbjct: 301 LDKISSSVRPRCIKLRQDSSE-GLYFVALKGRGNEGLKSAKMMSLKAISIQALSPKKILI 360

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI-------------MH 420
           LDSVG LHLLH+A++A G DFS NIRPLPHLMK Q LTS PDT I             +H
Sbjct: 361 LDSVGDLHLLHIANTANGFDFSCNIRPLPHLMKAQMLTSFPDTIIRNQTVWLSDGNHSVH 420

Query: 421 MMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGHFSF 466
           +M+IPDVDS V EN GNE EEV MK+IS MQ IFAGEKIQDITSL+ANAVLILGQG  S+
Sbjct: 421 IMVIPDVDSVVPENMGNESEEVLMKRISVMQAIFAGEKIQDITSLAANAVLILGQGPHSW 478

[Close]

BLAST of CmaCh01G003950 vs. NCBI nr
Match: gi|778680625|ref|XP_011651361.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus])

HSP 1 Score: 658.7 bits (1698), Expect = 8.2e-186
Identity = 368/476 (77.31%), Postives = 398/476 (83.61%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFSP  LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSD KLGV VNF+HG+SVRLAGSVNFFAMYS+SS KIWVFAVKMV  GDG DD +
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV--GDG-DDGI 180

Query: 181 DLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNL------N 240
            LKLMRC VIDCCKPIWS++ISFGFLLLGEDNG+RVVNLRPFV+GRGRKVRNL      N
Sbjct: 181 GLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 AKREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGK 300
           AKREV KSFLPH +V  GTSGG DLNGGSL V +NG N  AS+S+ A  S  CNG LDGK
Sbjct: 241 AKREVQKSFLPHVDVC-GTSGGNDLNGGSLVVSSNGFNLQASRSEDA-GSLSCNGCLDGK 300

Query: 301 LDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILI 360
           LDK   SVR R +KLRQDSSE GLYFVALKGRG E L+SAKMM LKA+SIQALSP+KILI
Sbjct: 301 LDKISSSVRPRCIKLRQDSSE-GLYFVALKGRGNEGLKSAKMMSLKAISIQALSPKKILI 360

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSI-------------MH 420
           LDSVG LHLLH+A++A G DFS NIRPLPHLMK Q LTS PDT I             +H
Sbjct: 361 LDSVGDLHLLHIANTANGFDFSCNIRPLPHLMKAQMLTSFPDTIIRNQTVWLSDGNHSVH 420

Query: 421 MMMIPDVDSDVTENRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQG 458
           +M+IPDVDS V EN GNE EEV MK+IS MQ IFAGEKIQDITSL+ANAVLILGQG
Sbjct: 421 IMVIPDVDSVVPENMGNESEEVLMKRISVMQAIFAGEKIQDITSLAANAVLILGQG 470

[Close]

BLAST of CmaCh01G003950 vs. NCBI nr
Match: gi|659123263|ref|XP_008461571.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo])

HSP 1 Score: 628.6 bits (1620), Expect = 9.0e-177
Identity = 357/489 (73.01%), Postives = 389/489 (79.55%), Query Frame = 1


Query: 1   MVVVQATKLSLPNPSLSSPQITSFLFEPHSLSLALMHSDSSFSLYPSFSPFFLSSLPSPQ 60
           MVVVQATKLSLPNPSLSSPQI+S LFEPHSLSLALMHSDSSFSLYPSFS   LSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 61  LVVPSPSSSAAFVALLNSDSNSDSKVLFVVSGPHQGGSRILLRFYVLETCNLFRRVRVVC 120
           +VVPSP SSAAFVAL NS+SNSD+KVLFVVSGPH+GGS+ILLRFYVLE   LFRR  VVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 121 TQKDLRSDHKLGVLVNFKHGLSVRLAGSVNFFAMYSISSSKIWVFAVKMVAGGDGRDDVM 180
           TQKDLRSD KLGVLVNF+HG+SVRLAGSVNFFAMYS+SS KIWVFAVKMV  GDG DD+ 
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMV--GDGDDDI- 180

Query: 181 DLKLMRCVVIDCCKPIWSISISFGFLLLGEDNGVRVVNLRPFVKGRGRKVRNLNA----- 240
            LKLMRC VIDCCKPIWSI+ISFGFLLLGEDNG+RVVNLRPFV+GRGRKVRNLNA     
Sbjct: 181 GLKLMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN 240

Query: 241 -KREVHKSFLPHGEVVYGTSGGTDLNGGSLFVGNNGLNEHASKSDAAQSSAICNGSLDGK 300
            KREV KSFLPHG+V  GTSGGTDLNGGSL V +NG N  AS+S+ A SSA CNG LDGK
Sbjct: 241 GKREVQKSFLPHGDVC-GTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSA-CNGCLDGK 300

Query: 301 LDKHFDSVRSRSVKLRQDSSEGGLYFVALKGRGIEELRSAKMMPLKALSIQALSPRKILI 360
            DK+  SVR R +KLRQDSSE GLYFVALK R  E+L+SAKMM LKA+SIQALSP+KILI
Sbjct: 301 FDKNSSSVRPRCIKLRQDSSE-GLYFVALKRRANEDLKSAKMMSLKAISIQALSPKKILI 360

Query: 361 LDSVGGLHLLHLASSATGSDFSYNIRPLPHLMKVQTLTSVPDTSIMHMMMIPDVDSDVTE 420
           LDSVG LHLLHLA++A G DFS NIRPLPHLMKVQ LTS PDTSI+              
Sbjct: 361 LDSVGDLHLLHLANAANGFDFSCNIRPLPHLMKVQMLTSFPDTSII-------------- 420

Query: 421 NRGNEIEEVPMKKISDMQVIFAGEKIQDITSLSANAVLILGQGHFSFKAVLDDLVQSGGF 480
                           MQ IF+GEKIQDITSL+ANAVLILGQG  S++  L +  +   F
Sbjct: 421 ----------------MQAIFSGEKIQDITSLAANAVLILGQGPHSWEFALMEFGRLKSF 453

The following BLAST results are available for this feature:

BLAST of CmaCh01G003950 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CmaCh01G003950 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WXB1_PRUPE	1.5e-125	54.64	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1	[more]
W9RM69_9ROSA	9.6e-109	50.82	Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1	[more]
V4UWE2_9ROSI	9.0e-107	49.69	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1	[more]
A0A067EV01_CITSI	5.4e-104	48.85	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1	[more]
F6GVQ5_VITVI	7.9e-103	50.21	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0083g00100 PE=4 SV=...	[more]

BLAST of CmaCh01G003950 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CmaCh01G003950 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659123257\|ref\|XP_008461569.1\|	1.2e-189	75.30	PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo]	[more]
gi\|659123261\|ref\|XP_008461570.1\|	1.3e-188	78.15	PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo]	[more]
gi\|778680623\|ref\|XP_011651360.1\|	2.1e-186	76.45	PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus]	[more]
gi\|778680625\|ref\|XP_011651361.1\|	8.2e-186	77.31	PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus]	[more]
gi\|659123263\|ref\|XP_008461571.1\|	9.0e-177	73.01	PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmaCh01G003950.1	CmaCh01G003950.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37383	FAMILY NOT NAMED	coord: 2..477 score: 4.9E
None	No IPR available	PANTHER	PTHR37383:SF1	SUBFAMILY NOT NAMED	coord: 2..477 score: 4.9E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmaCh01G003950	Cucsa.031630	Cucumber (Gy14) v1	cgycmaB0011
CmaCh01G003950	Cla007115	Watermelon (97103) v1	cmawmB437
CmaCh01G003950	Csa3G260210	Cucumber (Chinese Long) v2	cmacuB455
CmaCh01G003950	MELO3C023764	Melon (DHL92) v3.5.1	cmameB431
CmaCh01G003950	ClCG05G012060	Watermelon (Charleston Gray)	cmawcgB407
CmaCh01G003950	CSPI03G20410	Wild cucumber (PI 183967)	cmacpiB458
CmaCh01G003950	CmoCh01G004190	Cucurbita moschata (Rifu)	cmacmoB468
CmaCh01G003950	Lsi05G004020	Bottle gourd (USVL1VR-Ls)	cmalsiB440
CmaCh01G003950	Cp4.1LG02g17150	Cucurbita pepo (Zucchini)	cmacpeB491
CmaCh01G003950	MELO3C023764.2	Melon (DHL92) v3.6.1	cmamedB497
CmaCh01G003950	CsaV3_3G020350	Cucumber (Chinese Long) v3	cmacucB0547
CmaCh01G003950	Cla97C05G093960	Watermelon (97103) v2	cmawmbB473
CmaCh01G003950	Bhi01G001440	Wax gourd	cmawgoB0562
CmaCh01G003950	CsGy3G020140	Cucumber (Gy14) v2	cgybcmaB368
CmaCh01G003950	Carg07488	Silver-seed gourd	carcmaB1059

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CmaCh01G003950	Cucurbita maxima (Rimu)	cmacmaB255
CmaCh01G003950	Cucurbita moschata (Rifu)	cmacmoB462
CmaCh01G003950	Cucurbita pepo (Zucchini)	cmacpeB494
CmaCh01G003950	Melon (DHL92) v3.6.1	cmamedB496
CmaCh01G003950	Silver-seed gourd	carcmaB0365
CmaCh01G003950	Silver-seed gourd	carcmaB0669