Cucsa.031630.1 (mRNA) Cucumber (Gy14) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cucsa.031630.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Gy14) v1)
Description	Ribosome biogenesis ERB1
Location	scaffold00429 : 782910 .. 784750 (+)
Sequence length	1017

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACCACCGAATCCTAAACTCGAAAGCCCGAGTTGAGGTTTAACCAACTCAAAAGCGAGAGGAGACGAGAAAAAAAGATGCTTCTTTTGAAACTTGATCTTCTTCTACAACCCCGTCGATTCCTCTCCCTGTCTCTAGAACTACTGCGACAGCATCCTTAACGATTCTCTCACAGGTCTTTGGCGTTTTTGTTGTTAAGATCCTCTAATGGTTGTTGTTCAGGCTACCAAGCTCAGCCTTCCCAACCCTTCTCTCTCTTCCCCACAAATTTCTTCCCTTCTCTTTGAACCTCATTCTCTTTCTCTTGCTCTAATGCACTCAGATTCTTCTTTCTCCCTCTACCCTTCTTTTTCCCCTCTCTCACTTTCCTCTCTTCCTTCCCCTCAAGTGGTTGTGCCTTCTCCGTGTTCTTCTGCGGCTTTTGTTGCCCTTCAGAATTCTAATTCCAACTCCGATACTAAGGTTCTGTTTGTGGTCTCTGGCCCCCACAAGGGTGGCTCTCAGATTCTCCTTCGGTTTTATGTTTTGGAGGGTTCTAAATTGTTCAGGAGAGCTCCAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTCAATTTTAGACATGGGATTTCGGTTCGTTTAGCTGGGTCAGTCAATTTCTTCGCCATGTACTCTGTTTCGAGCATGAAGATTTGGGTTTTTGCGGTGAAGATGGTGGGAGACGGCGATGATGGGATAGGTTTGAAATTGATGAGATGTGCTGTGATTGATTGCTGCAAACCCATTTGGTCGCTTAACATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGGATTAGGGTTGTTAATTTGAGGCCCTTTGTGAGAGGGCGTGGTCGAAAAGTTAGGAATCTGAATGCAAATACCTCTTCTAATGCCAAGCGTGAAGTTCAGAAGTCATTTTTGCCTCATGTAGATGTTTGTGGAACTTCTGGTGGCAATGACTTGAACGGTGGTTCTTTAGTTGTTAGCAGCAATGGATTCAATTTACAAGCCAGTAGAAGTGAAGATGCTGGAAGCTTAGCTTGCAATGGATGCTTGGACGGGAAGTTGGACAAAATTTCTAGTTCTGGTAAGTTAAGAGAGTTTTATTACTTTAGTTTATTTGATTTATCTTTTTAGTTTTCACAGTAAGAGGGATACATTTAAATGTATATTATGCGTACATTTTATTTATATTGGTTGTGTCTCCTGTAATTTGGAACTTTTGATCATAATTTTAATCCTGGGGGCCTTCTTTTAATTGCCCAAGGTAGGTGTGAGCATAATTATAATACCATGCGTTTGCTGAAGTTTGAGGCGGCATGTTAAAAATTTCAAGAGTTTGGAGCAATCTTTATTCAAAGTGTATGTGATGTAGCATTATAGCTATGTAGTTTTTGGTCAATGTTGGGGTCTGTTATGAATTTGTTAGCTTGTCTTCTTTAATTCTGTTTTATAGAGCATTTTATTTAGAGCTGGCTGGTTAGTTAGTCATTACCCTTGACTGCTTTGGTTAGGATTTTAGGGAATTAGTTATTCCCCGTCAGAACCTTTAAATAGCTGCCATTAGGTTGCTAAAAAGGATCATTCAATAAAGAAGATGTTGGAGTACTCAATTGTCATTTGTATGCAACTGTATGCAACTGTATGCTATCAAGAATTATAATTTATAGGAGTGTTCAAGAAAGTTTGTTTTACTATAGATGGAGATGAGAGAAATCTATGCTGTTGTTTTTTAAGGAACAGGACGGACTCAAGAAGATTCTTTCTCAGACCAAAGCAGATTCTACATTTGTGGCCAGGCAAATTCTTGA

mRNA sequence

ATGAAACCACCGAATCCTAAACTCGAAAGCCCGAATCCTCTAATGGTTGTTGTTCAGGCTACCAAGCTCAGCCTTCCCAACCCTtctctctcttccccacaaatttcttcccttctctttgaacctcattctctttctcttgctctaatgcactcagattcttctttctccctctacccttctttttcccctctctcactttcctctcttccttcccctcAAGTGGTTGTGCCTTCTCCGTGTTCTTCTGCGGCTTTTGTTGCCCTTCAGAATTCTAATTCCAACTCCGATACTAAGGTTCTGTTTGTGGTCTCTGGCCCCCACAAGGGTGGCTCTCAGATTCTCCTTCGGTTTTATGTTTTGGAGGGTTCTAAATTGTTCAGGAGAGCTCCAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTCAATTTTAGACATGGGATTTCGGTTCGTTTAGCTGGGTCAGTCAATTTCTTCGCCATGTACTCTGTTTCGAGCATGAAGATTTGGGTTTTTGCGGTGAAGATGGTGGGAGACGGCGATGATGGGATAGGTTTGAAATTGATGAGATGTGCTGTGATTGATTGCTGCAAACCCATTTGGTCGCTTAACATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGGATTAGGGTTGTTAATTTGAGGCCCTTTGTGAGAGGGCGTGGTCGAAAAGTTAGGAATCTGAATGCAAATACCTCTTCTAATGCCAAGCGTGAAGTTCAGAAGTCATTTTTGCCTCATGTAGATGTTTGTGGAACTTCTGGTGGCAATGACTTGAACGGTGGTTCTTTAGTTGTTAGCAGCAATGGATTCAATTTACAAGCCAGTAGAAGTGAAGATGCTGGAAGCTTAGCTTGCAATGGATGCTTGGACGGGAAGTTGGACAAAATTTCTAGTTCTGGACGGACTCAAGAAGATTCTTTCTCAGAccaaagcagattctacatttgtggccaggcaaattcttga

Coding sequence (CDS)

ATGAAACCACCGAATCCTAAACTCGAAAGCCCGAATCCTCTAATGGTTGTTGTTCAGGCTACCAAGCTCAGCCTTCCCAACCCTTCTCTCTCTTCCCCACAAATTTCTTCCCTTCTCTTTGAACCTCATTCTCTTTCTCTTGCTCTAATGCACTCAGATTCTTCTTTCTCCCTCTACCCTTCTTTTTCCCCTCTCTCACTTTCCTCTCTTCCTTCCCCTCAAGTGGTTGTGCCTTCTCCGTGTTCTTCTGCGGCTTTTGTTGCCCTTCAGAATTCTAATTCCAACTCCGATACTAAGGTTCTGTTTGTGGTCTCTGGCCCCCACAAGGGTGGCTCTCAGATTCTCCTTCGGTTTTATGTTTTGGAGGGTTCTAAATTGTTCAGGAGAGCTCCAGTTGTTTGCACGCAGAAGGATCTTCGATCTGATGATAAATTGGGTGTTTTGGTCAATTTTAGACATGGGATTTCGGTTCGTTTAGCTGGGTCAGTCAATTTCTTCGCCATGTACTCTGTTTCGAGCATGAAGATTTGGGTTTTTGCGGTGAAGATGGTGGGAGACGGCGATGATGGGATAGGTTTGAAATTGATGAGATGTGCTGTGATTGATTGCTGCAAACCCATTTGGTCGCTTAACATTTCGTTTGGGTTTTTGCTTTTGGGGGAAGATAATGGGATTAGGGTTGTTAATTTGAGGCCCTTTGTGAGAGGGCGTGGTCGAAAAGTTAGGAATCTGAATGCAAATACCTCTTCTAATGCCAAGCGTGAAGTTCAGAAGTCATTTTTGCCTCATGTAGATGTTTGTGGAACTTCTGGTGGCAATGACTTGAACGGTGGTTCTTTAGTTGTTAGCAGCAATGGATTCAATTTACAAGCCAGTAGAAGTGAAGATGCTGGAAGCTTAGCTTGCAATGGATGCTTGGACGGGAAGTTGGACAAAATTTCTAGTTCTGGACGGACTCAAGAAGATTCTTTCTCAGACCAAAGCAGATTCTACATTTGTGGCCAGGCAAATTCTTGA

Protein sequence

MKPPNPKLESPNPLMVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQVVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKISSSGRTQEDSFSDQSRFYICGQANS*

Homology

[Close]

BLAST of Cucsa.031630.1 vs. TrEMBL
Match: M5WXB1_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 3.1e-90
Identity = 181/303 (59.74%), Postives = 221/303 (72.94%), Query Frame = 1


Query: 14  LMVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSP 73
           LMVVVQA+KL LPNPSLSSP I+SLLFEPHSLSLALMHSDS+ SLYPS SPLSLSSLP P
Sbjct: 26  LMVVVQASKLRLPNPSLSSPNITSLLFEPHSLSLALMHSDSTLSLYPSISPLSLSSLPPP 85

Query: 74  QVVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVV 133
           Q ++  P SS+ F+ LQN N N +T+VLF+VSGP++GGSQ+LLRFY+L   K F RA VV
Sbjct: 86  QTLIAPPSSSSTFLLLQNPNPNPNTRVLFIVSGPYRGGSQVLLRFYILHKQKQFVRAQVV 145

Query: 134 CTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV----GDGDD 193
           CTQK+L+ D KLGVLV+  HG+S++LAGSVNFFAMYSVSS KIWVFAVK +     D +D
Sbjct: 146 CTQKELQFDQKLGVLVDAHHGVSIKLAGSVNFFAMYSVSSSKIWVFAVKSIDNDDNDDND 205

Query: 194 GIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTS 253
           G+ +KLMRCAVI+CCK +WS++ISFGFL+LGEDNG+RV NLR  V+GR RK + LN    
Sbjct: 206 GMVVKLMRCAVIECCKLVWSISISFGFLILGEDNGVRVFNLRQLVKGRVRKAKLLN---- 265

Query: 254 SNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGK 313
           S++K E +   LP+  V G    +DL          G      +      + CNG L GK
Sbjct: 266 SSSKTEGRNLCLPN-GVIGDHAHSDL-------GDKGNKYGGGKFHGTSEIPCNGDLCGK 316

[Close]

BLAST of Cucsa.031630.1 vs. TrEMBL
Match: W9RM69_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 3.1e-82
Identity = 175/299 (58.53%), Postives = 216/299 (72.24%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSL-SSLPSP 74
           MVVVQA+KL+LPNPSLSSP I+SLLFEP SLSLALMHSDSSFSLYPS SPL + SSLP P
Sbjct: 1   MVVVQASKLNLPNPSLSSPHITSLLFEPTSLSLALMHSDSSFSLYPSLSPLRISSSLPPP 60

Query: 75  QVVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVV 134
           Q  VP+PCSS+ FV LQN NS ++ + LFV SGPH GGS+ILLRFY+L+G KLF +A VV
Sbjct: 61  QTTVPAPCSSSTFVLLQNPNS-AEPRPLFVASGPHAGGSRILLRFYILQGKKLFHKARVV 120

Query: 135 CTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGL 194
           C QKD +  ++ GVLV+  HG+SV+LAGSVNFFAMYSVS  K W+FAVK+V   DD + +
Sbjct: 121 CNQKDFQFVERFGVLVDSVHGVSVKLAGSVNFFAMYSVSGSKAWIFAVKLV---DDEV-V 180

Query: 195 KLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAK 254
           KLMRCAVI+C KP++S+ +SFG L+LGE+ G+RV NLR  V+GR +KV+NL  N+ S+ +
Sbjct: 181 KLMRCAVIECSKPVFSITLSFGVLILGEEWGVRVFNLRQLVKGRAKKVKNLQPNSKSDGR 240

Query: 255 REVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDK 313
               KS LP+  V G     DL     V S  G        E +    CN  LDGK ++
Sbjct: 241 ----KSRLPN-GVIGADVLGDLK--DYVHSEGGDRCGKCVIEGSSERTCNCYLDGKSNR 287

[Close]

BLAST of Cucsa.031630.1 vs. TrEMBL
Match: V4UWE2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1)

HSP 1 Score: 283.1 bits (723), Expect = 4.4e-73
Identity = 156/320 (48.75%), Postives = 213/320 (66.56%), Query Frame = 1


Query: 14  LMVVVQATKLSLPNPSLSS--PQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLP 73
           ++V+ +A+KLSLPNPSL S  PQI+S L+EP+SLSLALMHSDSS SLY S S  +LSSLP
Sbjct: 1   MVVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMHSDSSISLYSSISLFTLSSLP 60

Query: 74  S-PQVVVPSPCSSAAFVALQNS-NSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRR 133
           S PQV++PSP  S  F+ L ++ N N   +V F+  GPH+   +++LR YVL+ +  + +
Sbjct: 61  STPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGK 120

Query: 134 APVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV-GDGD 193
           A V C QK +  D+KLGVL++  HG+ ++L GSVNFFAMYS+SS KIWVF VK++ GDGD
Sbjct: 121 AQVFCKQKGVSFDEKLGVLLDINHGLGLKLVGSVNFFAMYSLSSSKIWVFGVKLMDGDGD 180

Query: 194 DGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANT 253
           DG+ +KLMRCAVI+CCKP+WSL++SFGF++LGEDNG+RV+NLR  V+G+ +K++N     
Sbjct: 181 DGVRVKLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN----- 240

Query: 254 SSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDG 313
                     S LP             NG   ++   GF+    R      +ACNG LD 
Sbjct: 241 ----------SSLP-------------NG---IIGDYGFDGPTER------IACNGYLDE 283

Query: 314 KLDKISSSGRTQEDSFSDQS 329
           K+DK S S + +   +   S
Sbjct: 301 KIDKHSVSVKQRSVKYKQDS 283

[Close]

BLAST of Cucsa.031630.1 vs. TrEMBL
Match: A0A067EV01_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1)

HSP 1 Score: 273.9 bits (699), Expect = 2.7e-70
Identity = 152/320 (47.50%), Postives = 210/320 (65.62%), Query Frame = 1


Query: 14  LMVVVQATKLSLPNPSLSS--PQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLP 73
           ++V+ +A+KLSLPNPSL S  PQI+S L+EP+SLSLALM SDSS SLY S S  +LSSLP
Sbjct: 1   MVVISRASKLSLPNPSLPSSPPQITSALYEPNSLSLALMRSDSSISLYSSISLFTLSSLP 60

Query: 74  S-PQVVVPSPCSSAAFVALQNS-NSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRR 133
           S PQV++PSP  S  F+ L ++ N N   +V F+  GPH+   +++LR YVL+ +  + +
Sbjct: 61  STPQVLIPSPSYSFTFLLLNHTPNPNPSPRVAFIAVGPHRSEPKLVLRLYVLKRNNFYGK 120

Query: 134 APVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMV-GDGD 193
           A V C QK +  D+KLGVL++  HG+ ++L GSVNFFAM+S+SS KIWVF V ++ GDGD
Sbjct: 121 AQVFCKQKGVSFDEKLGVLLDITHGVGLKLVGSVNFFAMHSLSSSKIWVFGVMLMDGDGD 180

Query: 194 DGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANT 253
           DG+ + LMRCAVI+CCKP+WSL++SFGF++LGEDNG+RV+NLR  V+G+ +K++N     
Sbjct: 181 DGVRVNLMRCAVIECCKPVWSLSLSFGFMILGEDNGVRVLNLRSLVKGKVKKIKN----- 240

Query: 254 SSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDG 313
                     S LP             NG   ++   GF+    R      +ACNG LD 
Sbjct: 241 ----------SSLP-------------NG---IIGDYGFDGPTER------IACNGYLDE 283

Query: 314 KLDKISSSGRTQEDSFSDQS 329
           K+DK S S + +   +   S
Sbjct: 301 KIDKHSVSVKQRSVKYKQDS 283

[Close]

BLAST of Cucsa.031630.1 vs. TrEMBL
Match: A5C8T8_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011687 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 6.6e-69
Identity = 157/306 (51.31%), Postives = 199/306 (65.03%), Query Frame = 1


Query: 6   PKLESPNPLMVVVQATKLSLPNPSLSS-PQISSLLFEPHSLSLALMHSDSSFSLYPSFSP 65
           P L +   LM  VQA KLSLP PS SS P I+SLLFEPHS SLALMHSDSSFSLYPS SP
Sbjct: 3   PVLPAVAALMFEVQACKLSLPRPSFSSLPPITSLLFEPHSNSLALMHSDSSFSLYPSLSP 62

Query: 66  LSLSSLPSPQ------VVVPSPCSSAAFVALQNSNSNS---DTKVLFVVSGPHKGGSQIL 125
            S    PSPQ       +VP P S A F+ LQN   NS   + +VLFVV+ PH+ G+ ++
Sbjct: 63  FSP---PSPQSQAPTLTLVPPPSSFATFLLLQNPRPNSGAHNPRVLFVVAAPHRAGAAVI 122

Query: 126 LRFYVLEGSKLFRRAPVVCTQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMK 185
           LRFYVL+ ++LF +A V+CTQ+DL+ D KLGVL N  HG+SV+L GS+N FAMYSVS+ K
Sbjct: 123 LRFYVLQKTQLFTKAEVLCTQRDLQFDPKLGVLFNANHGVSVKLGGSINIFAMYSVSNSK 182

Query: 186 IWVFAVKMVGDG-DDGIGLKLMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFV 245
           IWVF+VKM GD  DDG+ LKL +CAVIDC  P++S+++S  FL+LGE+NG+RV  LRP V
Sbjct: 183 IWVFSVKMAGDDRDDGVVLKLRKCAVIDCGVPVFSISVSGEFLILGEENGVRVFQLRPLV 242

Query: 246 RG----RGRKVRNLN---------ANTSSNAKREVQKSFLPHVDVCGTSGGNDLNGGSLV 288
           +G      R+ +NLN         A   +N +           D+   SG N L G + +
Sbjct: 243 KGWIRKEQRESKNLNFPNGCGSKSAGVEANMEIACNGDLEGRTDLHRVSGMNILQGRNKL 302

[Close]

BLAST of Cucsa.031630.1 vs. NCBI nr
Match: gi|778680625|ref|XP_011651361.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.3e-166
Identity = 301/304 (99.01%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGV VNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR
Sbjct: 181 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSL+CNGCLDGKLDKIS
Sbjct: 241 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLSCNGCLDGKLDKIS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630.1 vs. NCBI nr
Match: gi|778680623|ref|XP_011651360.1| (PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus])

HSP 1 Score: 594.3 bits (1531), Expect = 1.3e-166
Identity = 301/304 (99.01%), Postives = 302/304 (99.34%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGV VNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK
Sbjct: 121 TQKDLRSDDKLGVWVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR
Sbjct: 181 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSL+CNGCLDGKLDKIS
Sbjct: 241 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLSCNGCLDGKLDKIS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630.1 vs. NCBI nr
Match: gi|659123263|ref|XP_008461571.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFS LSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSS+KIWVFAVKMVGDGDD IGLK
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMVGDGDDDIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWS+NISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN KR
Sbjct: 181 LMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNGKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPH DVCGTSGG DLNGGSLVVSSNGFNLQASRSEDAGS ACNGCLDGK DK S
Sbjct: 241 EVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSACNGCLDGKFDKNS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630.1 vs. NCBI nr
Match: gi|659123261|ref|XP_008461570.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFS LSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSS+KIWVFAVKMVGDGDD IGLK
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMVGDGDDDIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWS+NISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN KR
Sbjct: 181 LMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNGKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPH DVCGTSGG DLNGGSLVVSSNGFNLQASRSEDAGS ACNGCLDGK DK S
Sbjct: 241 EVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSACNGCLDGKFDKNS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

[Close]

BLAST of Cucsa.031630.1 vs. NCBI nr
Match: gi|659123257|ref|XP_008461569.1| (PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo])

HSP 1 Score: 577.0 bits (1486), Expect = 2.1e-161
Identity = 293/304 (96.38%), Postives = 295/304 (97.04%), Query Frame = 1


Query: 15  MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSPLSLSSLPSPQ 74
           MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFS LSLSSLPSPQ
Sbjct: 1   MVVVQATKLSLPNPSLSSPQISSLLFEPHSLSLALMHSDSSFSLYPSFSALSLSSLPSPQ 60

Query: 75  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 134
           VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC
Sbjct: 61  VVVPSPCSSAAFVALQNSNSNSDTKVLFVVSGPHKGGSQILLRFYVLEGSKLFRRAPVVC 120

Query: 135 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSMKIWVFAVKMVGDGDDGIGLK 194
           TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSS+KIWVFAVKMVGDGDD IGLK
Sbjct: 121 TQKDLRSDDKLGVLVNFRHGISVRLAGSVNFFAMYSVSSLKIWVFAVKMVGDGDDDIGLK 180

Query: 195 LMRCAVIDCCKPIWSLNISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNAKR 254
           LMRCAVIDCCKPIWS+NISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSN KR
Sbjct: 181 LMRCAVIDCCKPIWSINISFGFLLLGEDNGIRVVNLRPFVRGRGRKVRNLNANTSSNGKR 240

Query: 255 EVQKSFLPHVDVCGTSGGNDLNGGSLVVSSNGFNLQASRSEDAGSLACNGCLDGKLDKIS 314
           EVQKSFLPH DVCGTSGG DLNGGSLVVSSNGFNLQASRSEDAGS ACNGCLDGK DK S
Sbjct: 241 EVQKSFLPHGDVCGTSGGTDLNGGSLVVSSNGFNLQASRSEDAGSSACNGCLDGKFDKNS 300

Query: 315 SSGR 319
           SS R
Sbjct: 301 SSVR 304

The following BLAST results are available for this feature:

BLAST of Cucsa.031630.1 vs. TrEMBL


Match Name	E-value	Identity	Description
M5WXB1_PRUPE	3.1e-90	59.74	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppb003710mg PE=4 SV=1	[more]
W9RM69_9ROSA	3.1e-82	58.53	Uncharacterized protein OS=Morus notabilis GN=L484_008668 PE=4 SV=1	[more]
V4UWE2_9ROSI	4.4e-73	48.75	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10011716mg PE=4 SV=1	[more]
A0A067EV01_CITSI	2.7e-70	47.50	Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g013116mg PE=4 SV=1	[more]
A5C8T8_VITVI	6.6e-69	51.31	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_011687 PE=4 SV=1	[more]

BLAST of Cucsa.031630.1 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680625\|ref\|XP_011651361.1\|	1.3e-166	99.01	PREDICTED: uncharacterized protein LOC101211683 isoform X2 [Cucumis sativus]	[more]
gi\|778680623\|ref\|XP_011651360.1\|	1.3e-166	99.01	PREDICTED: uncharacterized protein LOC101211683 isoform X1 [Cucumis sativus]	[more]
gi\|659123263\|ref\|XP_008461571.1\|	2.1e-161	96.38	PREDICTED: uncharacterized protein LOC103500140 isoform X3 [Cucumis melo]	[more]
gi\|659123261\|ref\|XP_008461570.1\|	2.1e-161	96.38	PREDICTED: uncharacterized protein LOC103500140 isoform X2 [Cucumis melo]	[more]
gi\|659123257\|ref\|XP_008461569.1\|	2.1e-161	96.38	PREDICTED: uncharacterized protein LOC103500140 isoform X1 [Cucumis melo]	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Cucsa.031630	Cucsa.031630	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Cucsa.031630.1	Cucsa.031630.1-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Cucsa.031630.1.CDS.1	Cucsa.031630.1.CDS.1	CDS
Cucsa.031630.1.CDS.2	Cucsa.031630.1.CDS.2	CDS
Cucsa.031630.1.CDS.3	Cucsa.031630.1.CDS.3	CDS

InterPro

Analysis Name: InterPro Annotations of cucumber (Gy14)
Date Performed: 2017-01-17


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR37383	FAMILY NOT NAMED	coord: 16..276 score: 5.0