CsaV3_7G000550 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTGACTTTTTGATTTTATTAAATAAATATTGGGGTATTGTTTAAGAAAAATTAACCAAAACCGAATGATTTATTTTGGAAAATTTACCAAAGATTAAAGTGGACCTGAGCGCACAGAATCTAAACTGCAAGTAGAGAGAGTGAGTCGAAGCTTCAAATTCCTTAGGGCTCCTCGCTTCTTCTAATCGGCTTCTACTTCTACCAAAATTTTCATTCGTTCTTCTTCTCTGCTTCCCTTTGCAAAATCCTTTCATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTATGTTTTTCTTTATTTCCCATCGTTTTCACTAATTTTTCGGTCTATACATTTCATGTTGCCATTGCTATTTGTGGATCTGACTTTGATTCAATACTCGAATTTAATGTTCATATTCAACGTTTTTTTACCCTTCTCCTTCTCAGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGTTTGTTCATCTGGGATCTATTTCTGTTTGCTTGTTTTTCTCGACAATCTTGGATTTCTTTCGATTACAGATGTAGATGCAGGATATATTTTTAGGGCCAATCTGAATGTCTCTGTGCTTTGAGATTAGTTTCAAGTGTATTCTTCAAGAATTTTTATTTCTATTTATAAGACCCGAAGTCTTTAGATTGATTCAAATATGCCGTTTGAGAATTTTACCTTTAAAAAGAGTTAAGAAAATTGATGCGGTCTGGCTGCTTAGTTGTTAGAGTAAATTCGCAGACATGGCTTTTATAAAAATGAAGGGCCACAATGTAGTTTGAACAAATGATGGTCTTGGTTAATTTATCATTTTGAAATTTATATTTTGAACATTTTTTTTTCTTGAAGCACAATTCGTCTATTTATGTTTACATAATATTTGATAACTATATTAAAATAGATTATTTGGTCTAAATGTCTAATGCCGTGAAAGGATCAATTGTTTTTAATGGGCTGTCAAACTTCTTTGAACTTGGAGATCATGGAATGAAATTATTTTCAGAGTTCGAACATAGAGTTTGGTTTGTGAACCATGGTAAATATGCTTGGTCTAGGACTTCATTTGTGAAATTCCATTAATATACTCAATGACGACCAATGGTTTAGTCTTCTACTTCTAGTTTCATTCCTTTTCAATTTCAGTTTGACTTATAGGAATTGTGCTCTTACAATCTCATGTTATTTCTAGCTGTCTTTTGAGGCCATTCTAAATGCACCTGTCTGATTTTAGAATTTTATTTCCGTTACTATTTTATCACCACAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTAATTTCGGTCTGTGTCAAAAACGAGGCACTGGTTGAATTTCAAAGGGAAATAATACATTGTAGTTGGTCAAAATCTATTTTTCTTTAATAATTTTTTTCCCATGTTGCATTGGATGGCTCTATATTCCTTGAAGAGTTATATAGATGTATCTTACATCGGTCTTAAGGACTATATTTGAAAGCTACAATTAGTTTTGATGGATTGATGAGAGGACAAACAGATCACGATTCCTTTCTTTGATTGAAAATGAATAATTTGCTTGTCATCTTTCTTGGTGCAGGTGTTGGGTTAATTCATTAATGTTTATTCATCTGTATGTTATTTTTTTTTTCTAATAAACGTACTCTACTTGGAATTTGAAATATGATGGGGTTTATTTATTTATTTTTTGTTATAAGATAAGAAATTAAGTTTTAGAAAACAAGGGAACATCCAACAGCCATCGTGTTGAGGGTCTAGTGGTACTGGGATGTGCCAAAAAAACAAAGAGAACGGCATAATAGGCTCAAGGTTCAAATTTTTGTGACCACTTAGTTTGTGATACTAAGATTCTATTATTTCTATTTTCTCGTAATTAAATCTTGTAGGTAGAGGTGGTTGACCATGGGGTGAGTCGAGATCAAGGTTTAAAATTTGTGTTGGCATGTCAATACAATAATCAACATTTCAAACTTTGCTTGTCGTTTCAGGTTAATTTTTGGTATTGGTACAAAATGGTAAATCTTTAGTTTGAGGAATAGTATTTGAAAGTTTGAATTTATGTAACTGTCGCATAGCTTCCAGACCAAGCATCGTTGTCTTGAATCAGCTCATTGGCTTTATCGTGTTCTCCATCCAAACATCTTCTTACCATGTCTTAACTGAAATGCTTTTATTTTTCATGTGACTATTATTTTTCTTAAATACATTTTTTGTACTCTTTCACTACTTTGAGGAGGAGCATGTTGCTTTGAGCATTAGTTTTTTTTCGTTATATCAATGAAAATTTCAGTTTCTTGTTTAAAGATTTTCACGTAGTACAAATCCTTCATAATCGGAGGCTGCTTTGTGTTATAGGTTCATTTTGTTGGGGCCTCGCTCCTCTGCCCTCAGGCTGTGCTTTTTTCTGATTACTACATAATTGCTCCTCATAGAAAAAGTTATCTAGTGATTAGGTTTTGTAAATTCATAGTTTAAGAGAGTAAATTCACCTATCAATTGTTAGCTTTGTTTTTCAAACTCCATACAAACAAAACCTTGGAGTTCAAACCTACTCCTAGGATGAAGGAAATTCCAAATAGAAGCTTGTTATAACTTATAAGTACACACAAACTTTCAGTTTTGTATTTATTTCAAAATTCAATGTTTGGAAATACTCAGACAAGGTTCTTTATAAAATACTTTTCCCCCCTTAGAAATATCGAAACATTAGATATCTGTTATCTACATTGACACAACATAAAACTTGTTGATACGGGTGTAGCTCAACAAGCAT ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
BLAST of CsaV3_7G000550 vs. NCBI nr
Match: KGN43194.1 (hypothetical protein Csa_7G007920 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 8.1e-19 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. NCBI nr
Match: XP_022952755.1 (uncharacterized protein LOC111455357 [Cucurbita moschata]) HSP 1 Score: 100.1 bits (248), Expect = 2.4e-18 Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. NCBI nr
Match: XP_022136306.1 (uncharacterized protein LOC111008022 [Momordica charantia]) HSP 1 Score: 98.2 bits (243), Expect = 9.0e-18 Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. NCBI nr
Match: PON36954.1 (ATPase, F0 complex, subunit E, mitochondrial [Parasponia andersonii] >PON99950.1 ATPase, F0 complex, subunit E, mitochondrial [Trema orientalis]) HSP 1 Score: 95.1 bits (235), Expect = 7.6e-17 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. NCBI nr
Match: XP_024020903.1 (uncharacterized protein LOC21395468 [Morus notabilis]) HSP 1 Score: 95.1 bits (235), Expect = 7.6e-17 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TAIR10
Match: AT3G01130.1 (unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-14 Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TAIR10
Match: AT5G15320.1 (unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 5.6e-14 Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A0A0K2E7|A0A0A0K2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 5.4e-19 Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2P5FQC9|A0A2P5FQC9_9ROSA (ATPase, F0 complex, subunit E, mitochondrial OS=Trema orientalis OX=63057 GN=TorRG33x02_043680 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2R6QQ22|A0A2R6QQ22_ACTCH (FAD-dependent cmnm(5)s(2)U34 oxidoreductase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16240 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2P5AKB4|A0A2P5AKB4_PARAD (ATPase, F0 complex, subunit E, mitochondrial OS=Parasponia andersonii OX=3476 GN=PanWU01x14_324020 PE=4 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0
BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2N9G4U9|A0A2N9G4U9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25569 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.9e-16 Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |