CsaV3_7G000550 (gene) Cucumber (Chinese Long) v3

NameCsaV3_7G000550
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionATP synthase E chain
Locationchr7 : 604327 .. 607173 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGACTTTTTGATTTTATTAAATAAATATTGGGGTATTGTTTAAGAAAAATTAACCAAAACCGAATGATTTATTTTGGAAAATTTACCAAAGATTAAAGTGGACCTGAGCGCACAGAATCTAAACTGCAAGTAGAGAGAGTGAGTCGAAGCTTCAAATTCCTTAGGGCTCCTCGCTTCTTCTAATCGGCTTCTACTTCTACCAAAATTTTCATTCGTTCTTCTTCTCTGCTTCCCTTTGCAAAATCCTTTCATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTATGTTTTTCTTTATTTCCCATCGTTTTCACTAATTTTTCGGTCTATACATTTCATGTTGCCATTGCTATTTGTGGATCTGACTTTGATTCAATACTCGAATTTAATGTTCATATTCAACGTTTTTTTACCCTTCTCCTTCTCAGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGTTTGTTCATCTGGGATCTATTTCTGTTTGCTTGTTTTTCTCGACAATCTTGGATTTCTTTCGATTACAGATGTAGATGCAGGATATATTTTTAGGGCCAATCTGAATGTCTCTGTGCTTTGAGATTAGTTTCAAGTGTATTCTTCAAGAATTTTTATTTCTATTTATAAGACCCGAAGTCTTTAGATTGATTCAAATATGCCGTTTGAGAATTTTACCTTTAAAAAGAGTTAAGAAAATTGATGCGGTCTGGCTGCTTAGTTGTTAGAGTAAATTCGCAGACATGGCTTTTATAAAAATGAAGGGCCACAATGTAGTTTGAACAAATGATGGTCTTGGTTAATTTATCATTTTGAAATTTATATTTTGAACATTTTTTTTTCTTGAAGCACAATTCGTCTATTTATGTTTACATAATATTTGATAACTATATTAAAATAGATTATTTGGTCTAAATGTCTAATGCCGTGAAAGGATCAATTGTTTTTAATGGGCTGTCAAACTTCTTTGAACTTGGAGATCATGGAATGAAATTATTTTCAGAGTTCGAACATAGAGTTTGGTTTGTGAACCATGGTAAATATGCTTGGTCTAGGACTTCATTTGTGAAATTCCATTAATATACTCAATGACGACCAATGGTTTAGTCTTCTACTTCTAGTTTCATTCCTTTTCAATTTCAGTTTGACTTATAGGAATTGTGCTCTTACAATCTCATGTTATTTCTAGCTGTCTTTTGAGGCCATTCTAAATGCACCTGTCTGATTTTAGAATTTTATTTCCGTTACTATTTTATCACCACAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTAATTTCGGTCTGTGTCAAAAACGAGGCACTGGTTGAATTTCAAAGGGAAATAATACATTGTAGTTGGTCAAAATCTATTTTTCTTTAATAATTTTTTTCCCATGTTGCATTGGATGGCTCTATATTCCTTGAAGAGTTATATAGATGTATCTTACATCGGTCTTAAGGACTATATTTGAAAGCTACAATTAGTTTTGATGGATTGATGAGAGGACAAACAGATCACGATTCCTTTCTTTGATTGAAAATGAATAATTTGCTTGTCATCTTTCTTGGTGCAGGTGTTGGGTTAATTCATTAATGTTTATTCATCTGTATGTTATTTTTTTTTTCTAATAAACGTACTCTACTTGGAATTTGAAATATGATGGGGTTTATTTATTTATTTTTTGTTATAAGATAAGAAATTAAGTTTTAGAAAACAAGGGAACATCCAACAGCCATCGTGTTGAGGGTCTAGTGGTACTGGGATGTGCCAAAAAAACAAAGAGAACGGCATAATAGGCTCAAGGTTCAAATTTTTGTGACCACTTAGTTTGTGATACTAAGATTCTATTATTTCTATTTTCTCGTAATTAAATCTTGTAGGTAGAGGTGGTTGACCATGGGGTGAGTCGAGATCAAGGTTTAAAATTTGTGTTGGCATGTCAATACAATAATCAACATTTCAAACTTTGCTTGTCGTTTCAGGTTAATTTTTGGTATTGGTACAAAATGGTAAATCTTTAGTTTGAGGAATAGTATTTGAAAGTTTGAATTTATGTAACTGTCGCATAGCTTCCAGACCAAGCATCGTTGTCTTGAATCAGCTCATTGGCTTTATCGTGTTCTCCATCCAAACATCTTCTTACCATGTCTTAACTGAAATGCTTTTATTTTTCATGTGACTATTATTTTTCTTAAATACATTTTTTGTACTCTTTCACTACTTTGAGGAGGAGCATGTTGCTTTGAGCATTAGTTTTTTTTCGTTATATCAATGAAAATTTCAGTTTCTTGTTTAAAGATTTTCACGTAGTACAAATCCTTCATAATCGGAGGCTGCTTTGTGTTATAGGTTCATTTTGTTGGGGCCTCGCTCCTCTGCCCTCAGGCTGTGCTTTTTTCTGATTACTACATAATTGCTCCTCATAGAAAAAGTTATCTAGTGATTAGGTTTTGTAAATTCATAGTTTAAGAGAGTAAATTCACCTATCAATTGTTAGCTTTGTTTTTCAAACTCCATACAAACAAAACCTTGGAGTTCAAACCTACTCCTAGGATGAAGGAAATTCCAAATAGAAGCTTGTTATAACTTATAAGTACACACAAACTTTCAGTTTTGTATTTATTTCAAAATTCAATGTTTGGAAATACTCAGACAAGGTTCTTTATAAAATACTTTTCCCCCCTTAGAAATATCGAAACATTAGATATCTGTTATCTACATTGACACAACATAAAACTTGTTGATACGGGTGTAGCTCAACAAGCAT

mRNA sequence

ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA

Coding sequence (CDS)

ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA

Protein sequence

MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
BLAST of CsaV3_7G000550 vs. NCBI nr
Match: KGN43194.1 (hypothetical protein Csa_7G007920 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 8.1e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. NCBI nr
Match: XP_022952755.1 (uncharacterized protein LOC111455357 [Cucurbita moschata])

HSP 1 Score: 100.1 bits (248), Expect = 2.4e-18
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MTLPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. NCBI nr
Match: XP_022136306.1 (uncharacterized protein LOC111008022 [Momordica charantia])

HSP 1 Score: 98.2 bits (243), Expect = 9.0e-18
Identity = 51/53 (96.23%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFS GLVYGS KLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSFGLVYGSFKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. NCBI nr
Match: PON36954.1 (ATPase, F0 complex, subunit E, mitochondrial [Parasponia andersonii] >PON99950.1 ATPase, F0 complex, subunit E, mitochondrial [Trema orientalis])

HSP 1 Score: 95.1 bits (235), Expect = 7.6e-17
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYL+AKAKSHKKAE KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLKAKAKSHKKAEEKAHH 53

BLAST of CsaV3_7G000550 vs. NCBI nr
Match: XP_024020903.1 (uncharacterized protein LOC21395468 [Morus notabilis])

HSP 1 Score: 95.1 bits (235), Expect = 7.6e-17
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVAR SAFS+GLVYG+LKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARVSAFSLGLVYGNLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. TAIR10
Match: AT3G01130.1 (unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-14
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K  S  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. TAIR10
Match: AT5G15320.1 (unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-14
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK L+ K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A0A0K2E7|A0A0A0K2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 5.4e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2P5FQC9|A0A2P5FQC9_9ROSA (ATPase, F0 complex, subunit E, mitochondrial OS=Trema orientalis OX=63057 GN=TorRG33x02_043680 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYL+AKAKSHKKAE KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLKAKAKSHKKAEEKAHH 53

BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2R6QQ22|A0A2R6QQ22_ACTCH (FAD-dependent cmnm(5)s(2)U34 oxidoreductase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc16240 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVAR SAFSVGLVYGS+KLKYL+AKAKSHKKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARVSAFSVGLVYGSMKLKYLKAKAKSHKKAEAKAHH 53

BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2P5AKB4|A0A2P5AKB4_PARAD (ATPase, F0 complex, subunit E, mitochondrial OS=Parasponia andersonii OX=3476 GN=PanWU01x14_324020 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 5.0e-17
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS+GLVYGSLKLKYL+AKAKSHKKAE KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSIGLVYGSLKLKYLKAKAKSHKKAEEKAHH 53

BLAST of CsaV3_7G000550 vs. TrEMBL
Match: tr|A0A2N9G4U9|A0A2N9G4U9_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25569 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 1.9e-16
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKSH+KAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSHQKAEAKAHH 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43194.18.1e-19100.00hypothetical protein Csa_7G007920 [Cucumis sativus][more]
XP_022952755.12.4e-1898.11uncharacterized protein LOC111455357 [Cucurbita moschata][more]
XP_022136306.19.0e-1896.23uncharacterized protein LOC111008022 [Momordica charantia][more]
PON36954.17.6e-1792.45ATPase, F0 complex, subunit E, mitochondrial [Parasponia andersonii] >PON99950.1... [more]
XP_024020903.17.6e-1792.45uncharacterized protein LOC21395468 [Morus notabilis][more]
Match NameE-valueIdentityDescription
AT3G01130.15.6e-1473.58unknown protein[more]
AT5G15320.15.6e-1471.70unknown protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K2E7|A0A0A0K2E7_CUCSA5.4e-19100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G007920 PE=4 SV=1[more]
tr|A0A2P5FQC9|A0A2P5FQC9_9ROSA5.0e-1792.45ATPase, F0 complex, subunit E, mitochondrial OS=Trema orientalis OX=63057 GN=Tor... [more]
tr|A0A2R6QQ22|A0A2R6QQ22_ACTCH5.0e-1792.45FAD-dependent cmnm(5)s(2)U34 oxidoreductase OS=Actinidia chinensis var. chinensi... [more]
tr|A0A2P5AKB4|A0A2P5AKB4_PARAD5.0e-1792.45ATPase, F0 complex, subunit E, mitochondrial OS=Parasponia andersonii OX=3476 GN... [more]
tr|A0A2N9G4U9|A0A2N9G4U9_FAGSY1.9e-1690.57Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25569 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: INTERPRO
TermDefinition
IPR008386ATP_synth_F0_esu_mt
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G000550.1CsaV3_7G000550.1mRNA


Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008386ATP synthase, F0 complex, subunit E, mitochondrialPFAMPF05680ATP-synt_Ecoord: 12..51
e-value: 2.9E-5
score: 24.2
NoneNo IPR availablePANTHERPTHR36028FAMILY NOT NAMEDcoord: 1..53

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_7G000550Cucumber (Chinese Long) v3cuccucB098
CsaV3_7G000550Cucumber (Chinese Long) v3cuccucB101
CsaV3_7G000550Silver-seed gourdcarcucB0347
CsaV3_7G000550Silver-seed gourdcarcucB1026
CsaV3_7G000550Cucumber (Gy14) v2cgybcucB093
CsaV3_7G000550Cucumber (Gy14) v2cgybcucB095
CsaV3_7G000550Cucumber (Gy14) v1cgycucB257
CsaV3_7G000550Cucurbita maxima (Rimu)cmacucB0231
CsaV3_7G000550Cucurbita maxima (Rimu)cmacucB0769
CsaV3_7G000550Cucurbita maxima (Rimu)cmacucB0958
CsaV3_7G000550Cucurbita moschata (Rifu)cmocucB0219
CsaV3_7G000550Cucurbita moschata (Rifu)cmocucB0757
CsaV3_7G000550Cucurbita moschata (Rifu)cmocucB0948
CsaV3_7G000550Cucurbita pepo (Zucchini)cpecucB0139
CsaV3_7G000550Cucurbita pepo (Zucchini)cpecucB0947
CsaV3_7G000550Cucurbita pepo (Zucchini)cpecucB1042
CsaV3_7G000550Wild cucumber (PI 183967)cpicucB118
CsaV3_7G000550Wild cucumber (PI 183967)cpicucB119
CsaV3_7G000550Bottle gourd (USVL1VR-Ls)cuclsiB524
CsaV3_7G000550Bottle gourd (USVL1VR-Ls)cuclsiB570
CsaV3_7G000550Melon (DHL92) v3.5.1cucmeB568
CsaV3_7G000550Melon (DHL92) v3.6.1cucmedB554
CsaV3_7G000550Watermelon (Charleston Gray)cucwcgB558
CsaV3_7G000550Watermelon (Charleston Gray)cucwcgB599
CsaV3_7G000550Watermelon (97103) v1cucwmB604
CsaV3_7G000550Watermelon (97103) v1cucwmB634
CsaV3_7G000550Watermelon (97103) v1cucwmB640
CsaV3_7G000550Watermelon (97103) v2cucwmbB539
CsaV3_7G000550Watermelon (97103) v2cucwmbB578
CsaV3_7G000550Wax gourdcucwgoB701
CsaV3_7G000550Wax gourdcucwgoB706