CSPI07G00530 (gene) Wild cucumber (PI 183967)

Overview
NameCSPI07G00530
Typegene
OrganismCucumis sativus (Wild cucumber (PI 183967))
DescriptionATP synthase E chain
LocationChr7 : 583920 .. 585688 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGGACCTGAGCGCACAGAATCTAAACTGCAAGTAGAGAGAGTGAGTCGAAGCTTCAAATTCCTTAGGGCTCCTCGCTTCTTCTAATCGGCTTCTACTTCTACCAAAATTTTCATTCGTTCTTCTTCTCTGCTTCCCTTTGCAAAATCCTTTCATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTATGTTTTTCTTTATTTCCCATCGTTTTCACTAATTTTTCGGTCTATACATTTCATGTTGCCATTGCTATTTGTGGATCTGACTTTGATTCAATACTCGAATTTAATGTTCATATTCAACGTTTTTTTACCCTTCTCCTTCTCAGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGTTTGTTCATCTGGGATCTATTTCTGTTTGCTTGTTTTTCTCGACAATCTTGGATTTGTTTCGATTACAGATGTAGATGCAGGACATATTTTTAGGGCCAATCTGAATGTCTTTGTGCTTTGAGATTAGTTTCAAGTGTATTCTTCAAGAATTTTTATTTCTATTTATAAGACCCGAAGTCTTTAGATTGATTCAAATATGCCGTTTGAGAATTTTACCTTTAAAAAGAGTTATGAAAATTGATGCGGTCTGGCTGCTTAGTTGTTAGAGTAAATTCGCAGACATGGCTTTTATAAAAATGAAGGGCCACAATGTAGTTTGAACAAATGATGGTCTTGGTTAATTTATCATTTTGAAATTTATATTTTGAACATTTTTTTTTCTTGAAGCACAATTCGTCTATTTATGTTTACATAATATTTGATAACTATATTAAAATAGATTATTTGGTCTAAATGTCTAATGCCGTGAAAGGATCAATTGTTTTTAATGGGCTGTCAAACTTCTTTGAACTTGGAGATCATGGAATGAAATTATTTTCAAAGTTCGAACATAGAGTTTGGTTTGTGAACCATGGTAAATATGCTTGGTCTAGGACTTCATTTGTGAAATTCCATTAATATACTCAATGACGACCAATGGTTTAGTCTTCTACTTCTAGTTTCATTCCTTTTCAATTTCAGTTTGACTTATAGGAATTGTGCTCTTACAATCTCATGTTATTTCTAGCTGTCTTTTGAGGCCATTCTAAATGCACCTGTCTGATTTTAGAATTTTATTTCCGTTACTATTCTATCACCACAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGAGGTATGGCTAATTTCGGTCTGTGTCAAAAACGAGGCACTGGTTGAATTTCAAAGGGAAATAATACATTGTAGTTGGTCAAAATCTATTTTTCTTTAATAATTTTTTTCCCATGTTGCATTGGATGGCTCTATATTCCTTGAAGAGTTATATAGATGTATCTTACATCGGTCTTAAGGACTATATTTGAAAGCTACAATTAGTTTTGATGGATTGATGAGAGGACAAACAGATCACGATTCCTTTCTTTGATTGAAAATGAATAATTTGCTTGTCATTTTTCTTGGTGCAGGTGTTGGGTTAATTCATTAATGTTTATTCATCTGTATGTTATTTTTTTTTCTAATAAACGTACTCTACTTGGAATTTGAAAATGATGGGGTTTATTTATTTATTTTTTGTTATAAGATAAGAAATTAAGTTTTAGAAAACAAGGGAACTTCCAACAGCCATCGTGTTGAGGGTCTAGTGGTACTGGGATGCGCCAAAAAAACAAAGAGAACGGC

mRNA sequence

ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA

Coding sequence (CDS)

ATGGCACTTCCTCCAGGCCCCTATTCTGGAACTAGCACTCTCGCCTTGGTTGCTCGTGCTTCGGCGTTCTCTGTTGGACTTGTCTACGGGAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCAAAATCTCACAAGAAAGCTGAAGCAAAGGCTCATCACTGA
Homology
[Close]
BLAST of CSPI07G00530 vs. TrEMBL
Match: A0A0A0K2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G007920 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 2.9e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. TrEMBL
Match: A0A061E0I0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006763 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.8e-16
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLK+L+AKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSMKLKFLKAKAKSQKKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. TrEMBL
Match: I1LPW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G036000 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 8.8e-16
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKSH+KA+ KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSHQKAQEKAHH 53

[Close]
BLAST of CSPI07G00530 vs. TrEMBL
Match: A0A0D2NDR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G244100 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.1e-15
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKA+S +KAEAKAHH
Sbjct: 1  MASPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKARSQRKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. TrEMBL
Match: K7LFD7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G222500 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 2.0e-15
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYG++KLKYL+AKAKSH+KA+ KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGTIKLKYLKAKAKSHQKAQEKAHH 53

[Close]
BLAST of CSPI07G00530 vs. TAIR10
Match: AT3G01130.1 (AT3G01130.1 unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-14
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K  S  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. TAIR10
Match: AT5G15320.1 (AT5G15320.1 unknown protein)

HSP 1 Score: 73.2 bits (178), Expect = 5.6e-14
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK L+ K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

[Close]
BLAST of CSPI07G00530 vs. NCBI nr
Match: gi|659094364|ref|XP_008448021.1| (PREDICTED: uncharacterized protein LOC103490330 [Cucumis melo])

HSP 1 Score: 101.7 bits (252), Expect = 4.2e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. NCBI nr
Match: gi|743884256|ref|XP_011037235.1| (PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica])

HSP 1 Score: 92.0 bits (227), Expect = 3.3e-16
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVAR SAFS+GLVYGS+KLKYLQAKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARVSAFSLGLVYGSVKLKYLQAKAKSQKKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. NCBI nr
Match: gi|1009149095|ref|XP_015892295.1| (PREDICTED: uncharacterized protein LOC107426588 [Ziziphus jujuba])

HSP 1 Score: 91.7 bits (226), Expect = 4.3e-16
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSQKKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. NCBI nr
Match: gi|590685060|ref|XP_007042000.1| (Uncharacterized protein TCM_006763 [Theobroma cacao])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-15
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLK+L+AKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSMKLKFLKAKAKSQKKAEAKAHH 53

[Close]
BLAST of CSPI07G00530 vs. NCBI nr
Match: gi|356545013|ref|XP_003540940.1| (PREDICTED: uncharacterized protein LOC100527703 [Glycine max])

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-15
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1 

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKSH+KA+ KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSHQKAQEKAHH 53

The following BLAST results are available for this feature:
BLAST of CSPI07G00530 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CSPI07G00530 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K2E7_CUCSA2.9e-19100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G007920 PE=4 SV=1[more]
A0A061E0I0_THECC8.8e-1688.68Uncharacterized protein OS=Theobroma cacao GN=TCM_006763 PE=4 SV=1[more]
I1LPW2_SOYBN8.8e-1686.79Uncharacterized protein OS=Glycine max GN=GLYMA_12G036000 PE=4 SV=1[more]
A0A0D2NDR3_GOSRA1.1e-1586.79Uncharacterized protein OS=Gossypium raimondii GN=B456_001G244100 PE=4 SV=1[more]
K7LFD7_SOYBN2.0e-1584.91Uncharacterized protein OS=Glycine max GN=GLYMA_09G222500 PE=4 SV=1[more]
BLAST of CSPI07G00530 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G01130.15.6e-1473.58 unknown protein[more]
AT5G15320.15.6e-1471.70 unknown protein[more]
BLAST of CSPI07G00530 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094364|ref|XP_008448021.1|4.2e-19100.00PREDICTED: uncharacterized protein LOC103490330 [Cucumis melo][more]
gi|743884256|ref|XP_011037235.1|3.3e-1690.57PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica][more]
gi|1009149095|ref|XP_015892295.1|4.3e-1690.57PREDICTED: uncharacterized protein LOC107426588 [Ziziphus jujuba][more]
gi|590685060|ref|XP_007042000.1|1.3e-1588.68Uncharacterized protein TCM_006763 [Theobroma cacao][more]
gi|356545013|ref|XP_003540940.1|1.3e-1586.79PREDICTED: uncharacterized protein LOC100527703 [Glycine max][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008386ATP_synth_F0_esu_mt
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI07G00530.1CSPI07G00530.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber (PI183967)
Date Performed: 2017-01-17
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008386ATPase, F0 complex, subunit E, mitochondrialPFAMPF05680ATP-synt_Ecoord: 12..51
score: 2.
NoneNo IPR availablePANTHERPTHR36028FAMILY NOT NAMEDcoord: 1..53
score: 7.4
NoneNo IPR availablePANTHERPTHR36028:SF1SUBFAMILY NOT NAMEDcoord: 1..53
score: 7.4

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CSPI07G00530Csa7G007920Cucumber (Chinese Long) v2cpicuB354
CSPI07G00530ClCG02G004430Watermelon (Charleston Gray)cpiwcgB575
CSPI07G00530Lsi11G011530Bottle gourd (USVL1VR-Ls)cpilsiB506
CSPI07G00530MELO3C013404.2Melon (DHL92) v3.6.1cpimedB524
CSPI07G00530CsaV3_7G000550Cucumber (Chinese Long) v3cpicucB415
CSPI07G00530Cla97C02G031380Watermelon (97103) v2cpiwmbB553
CSPI07G00530Bhi05G001529Wax gourdcpiwgoB681
CSPI07G00530Cucsa.382150Cucumber (Gy14) v1cgycpiB564
CSPI07G00530CmaCh11G010630Cucurbita maxima (Rimu)cmacpiB150
CSPI07G00530CmaCh19G007060Cucurbita maxima (Rimu)cmacpiB533
CSPI07G00530CmoCh19G007150Cucurbita moschata (Rifu)cmocpiB524
CSPI07G00530Cp4.1LG15g05650Cucurbita pepo (Zucchini)cpecpiB259
CSPI07G00530Cp4.1LG04g01200Cucurbita pepo (Zucchini)cpecpiB698
CSPI07G00530CsGy7G000450Cucumber (Gy14) v2cgybcpiB332
CSPI07G00530Carg22926Silver-seed gourdcarcpiB0246
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CSPI07G00530Cucurbita moschata (Rifu)cmocpiB189
CSPI07G00530Cucurbita moschata (Rifu)cmocpiB567
CSPI07G00530Cucurbita moschata (Rifu)cmocpiB644
CSPI07G00530Cucumber (Chinese Long) v2cpicuB328
CSPI07G00530Cucumber (Chinese Long) v2cpicuB329
CSPI07G00530Melon (DHL92) v3.5.1cpimeB539
CSPI07G00530Melon (DHL92) v3.5.1cpimeB556
CSPI07G00530Watermelon (Charleston Gray)cpiwcgB563
CSPI07G00530Watermelon (Charleston Gray)cpiwcgB598
CSPI07G00530Watermelon (97103) v1cpiwmB595
CSPI07G00530Watermelon (97103) v1cpiwmB622
CSPI07G00530Watermelon (97103) v1cpiwmB628
CSPI07G00530Cucurbita pepo (Zucchini)cpecpiB124
CSPI07G00530Cucurbita pepo (Zucchini)cpecpiB300
CSPI07G00530Cucurbita pepo (Zucchini)cpecpiB769
CSPI07G00530Cucurbita pepo (Zucchini)cpecpiB850
CSPI07G00530Bottle gourd (USVL1VR-Ls)cpilsiB497
CSPI07G00530Bottle gourd (USVL1VR-Ls)cpilsiB549
CSPI07G00530Melon (DHL92) v3.6.1cpimedB543
CSPI07G00530Cucumber (Gy14) v2cgybcpiB086
CSPI07G00530Cucumber (Gy14) v2cgybcpiB089
CSPI07G00530Silver-seed gourdcarcpiB0165
CSPI07G00530Silver-seed gourdcarcpiB0348
CSPI07G00530Silver-seed gourdcarcpiB1020
CSPI07G00530Cucumber (Chinese Long) v3cpicucB384
CSPI07G00530Cucumber (Chinese Long) v3cpicucB387
CSPI07G00530Watermelon (97103) v2cpiwmbB543
CSPI07G00530Watermelon (97103) v2cpiwmbB581
CSPI07G00530Wax gourdcpiwgoB688
CSPI07G00530Wax gourdcpiwgoB693
CSPI07G00530Wild cucumber (PI 183967)cpicpiB089
CSPI07G00530Wild cucumber (PI 183967)cpicpiB092
CSPI07G00530Cucumber (Gy14) v1cgycpiB249
CSPI07G00530Cucurbita maxima (Rimu)cmacpiB580
CSPI07G00530Cucurbita maxima (Rimu)cmacpiB651