CmaCh11G010630 (gene) Cucurbita maxima (Rimu)

NameCmaCh11G010630
Typegene
OrganismCucurbita maxima (Cucurbita maxima (Rimu))
DescriptionATP synthase E chain
LocationCma_Chr11 : 5830346 .. 5834080 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTGCAATAAGTATTTAGTTGAGGGACTAGTTGGTGCAATTTTATTTTTTTAAAAGAATTCAATTTCACGTGTACCACGGCGCAGTGGATTAAATCCTTGACGGTCAGTGAGGGAATTGGAGATTTGTTTAATCTTTGATTCCTAGGGCTCCTCTATTCTCAAAATCGGCTTCTGGTTCTACTGTTGCAACACTTTCTTCTTCTTCTCCATTTACCTTCGGAAAGTCCTTTCCATGGCGCTTCCTCCTGGGCCTTATTCTGGGACCAGCACCCTCGCTTTGGTACGTATGTTCAGTTTTTGTTTCCGATCGATTTCCTTGAAAATTTTCGACTAGAGATTAGGTTGAATTTCGCGTGTTGTAATGCTATATGCGGAATGTGATTTGAGATTTTATAATGGAAAATGATAAATTCAACGGTTTTGATCCTTGGCAGGTTGCTCGTGCTTCGGCTTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGTTTGTTGATTCCGTTTCCTTCTTTTCATATTGTTTGTTTTTTTCCGCTTCAAAACTTAGGCTCATCGAAGTCGGATTGCGTTTCTGGCTTGAATGTTTGTAGGATCTATATTATCATTTCTGATTGCTCTTCCCTGCCGACAGTATCGAGTGCTATCTGCAATTTGTTGTCGCATTCAAGATATAGAATTGTTTTTAGTGCATATATATTTTTTGGGTCAAAATTTCTGGGAAACTACGCAGTTACCCGTCAAATACTTGTTTTTTCAAGGCTAAGTCTCTACTTTTATCCTTTAAATTGATTCACATATGCGCTTGAAATATTTTATTTTTGATACGAATTTTGGAAATTGACTTTTAAAAACTGCACTGAAAACGTGGTTGATGTGCTTGTGAGTTAATAAATGAAAGACAATGTAGCTTGAAAAGTGAATTGTCAGGATATTGAAAGGCCTGTTTGACATTGCTCTGTTATGTCGATTCCATCTCAATGGTAAAATTGTTCAGGCTGTTTTGAAATCGATGTTAAAGGATAGAAGCGAAACTTTTTAAATGAAACAAACTTCTAAGTTTAGGGTCATTTTGAATAATTTAGCCTTTTTTCAATTAGGAAAGTAGAGTAAGAAAGTGAAGGGAGGAAAAAATCTCCTATCAAGTGAAGGGAGTTAGAAAAAGAACCATCTAGCTGACATGAATATTAAAAGAGGAATACTTTCTAGAAAGAATAAACTGCCATAGAACCTTCTCTGGTAGGTTTGATAAGTTCTCTTCAACAATTTGTCGAATACTTCCCCCTCCTTCAAGATGCCCCAAATCTCCTATCAAGTAGAAACAAAAGCGCATGATGGAAAAAGGTGATTTAATGTCTCAATCTCTTAGTGAGGAAGAAGTCACTATGAAGATGATAAAGATGAGTTTGGATCTTTTTCTTGTATTTTATCCCAAGTATGTGCCTTACTATCTAAGGAGAGTACCGGAAAAAAGAGAAGAGCATCTAAGTTTCTGTGGATCCTCCACTTCCATTCAAGTGTCTGTATCTCAAAATTTAGTCATCATGGAGTGAAATTTATTTATTTATTTCAAACTAGAATATTGATTTGTTAGGCCCCGTTTGTTAACCATTTGATTTTTGGTTTTTGAGAACTAAGAATACACACATTACTACTTTTGGGTTTTTTTTCCTTGTTTTGTTATCTACTTTTTACACATGTTGTAAAAAAACCAGACCACGTTATGGAAACTAAAAAAACAGTTTTCAATAACTTGTTTTTATTTTTAGAATTTTTCCGAATATTCAAATGTTTTGTTTTTTAAAGAAATATGAAACTCATTGTAGAGAAATGCAAGCTCAATTTTTTTTTAAAAAAATATATTAAAAATCAATTAGTTATTAAAATGAGCCTTAGAATTTAGGATTTTCAGTGATACCCATTATGCATGATGTAATTGTTGTGTTTTTTGTTTCAATATTTTTGTTTTGTTGTTTACTGATTATTTCACAACAGATTACCATTAATTTTATCATATTGAAATTTAAATTTTAAACATTTTTCTTGAAGCAACTATATATGGTTTACAACATAGCTCATAAACCTATTAAACTAGATGGATTGGTCTAATACCATGAAAGTATTAATTGTTCTTATTGTTCTGTTGAATTTCTTTGAACTTGATGGTTCAGTTGAGTTGGATTGAAAATGATATTAGAAGGAAACTATTTTTTGAAATTGAAACTTCGAGTTTGGTTTTTGAACCTTAGTAAGAATGCTTGAAATAAACTATGCGTGGTCTTGGACCATATTTATTAATTTCCATTAATGTACTTAATGACGACCAATGATTTATTCCCCTATTTTTATTCAACTGAAGATCCAAATTATAGTTAATTTCAAGTTGAGGTTTGATAGAACCCAACATGTTATATGCTATCTTAAAAGTTTAAATGTAGATAACCTTCAACTTAACTGTGGGATTGTTAGTCACAAGTCATAACTTGTGCACATTTGAAAATGGAGCGGAAATAAATTGTTTCATGATATACCATTTTATATTCTATTCATATAGGGCTTATAAATTTCTATATGGATTTTGTTTTCGATCCATTTGGTGTAGCATCTTTTGTATCTGTTGCTGTTGTCTTATTTACGAACAGGATTAGTCAATAGGTCGCCTATTATGAAGCATAGATACTTTGTTTTAGGCTGAGTGTCCGTGTCAGACACATGTTGTACACGTATACGTTCAAACATGCTTTGGACATGTGTGCAACATGCTATTTTACACGACTTTTTTTTGTTTTGTTTTTTTTTTAATTTCGAACATGGCTTGGAAAATTTTGAATTTTAAAAATAGGCCCAACATTTAATCGTGAAATTTGAACCCCTAACAAGTAACACCATTGACTACTTGTTGCTAGCTGTCAGTTCTGTTTTTCACAGTAAGTTCACCACTTAGAATATGTTTTTTATGCCATTTAGTTTAGTATATTTAGTATTTCACGTTAATTTTACATATATCTTAAAATAATAATAAAAAAGAACATACCCCCAACATGTTCGTGTCCTAGTCTCTTAGAAACTGATGTATTGTTGTGCCTATCACGTCGGTATTCATGTCCCGTTTCCGTGCTTCTTAGGTTTGCCCATCTGTAACCTTGAGTTTTAAGGGGAAGAGGATCTATAGTCCATGACATTCCTATTCAATTTCAGTTCAACTTATAATCATATTATGATTTCAAAATTTCATGTTATTTGTGGCTCTCTTTTGAAGTAATTCTAAATTCACATGTCTGTTCTTAAATTTTTACTTCAATTCCTAATTATTCACTGCAGGCGAAGGCTAAATCTCACAAGAAAGCAGAAGCCAAGGCTCATCACTGAGGTATGGGCTGATTCTGGTCAGCGTGAAAACTTAGGAACCGGTTGAATTTGAAAGCGAATAATACATAGTAGATGGTCACGATCTATTTTCTTTCGTACTTTTTTGTTCTGCATTGGATGACTCTATAGTCACTGAAGAGTCGTGGAGATGTATCTAACCTCGGTCTTAGTGGTCGTATTTGAGTTACACAATTCGTTCTGATGGATGGACGAGAGGGTTATCAGATCATGATTCCTTGATTGAAATGAATAACTTGTTTCCCATCTTTCTTGGTGTTTGGATTATGATTATTGGATTTAAGTAATCTACATTTTTTGTTAGAGGTGTAGTCGGAAAAGTAGGATTAAATCG

mRNA sequence

ATGAGTGCAATAAGTATTTAGGCTCCTCTATTCTCAAAATCGGCTTCTGGTTCTACTGTTGCAACACTTTCTTCTTCTTCTCCATTTACCTTCGGAAAGTCCTTTCCATGGCGCTTCCTCCTGGGCCTTATTCTGGGACCAGCACCCTCGCTTTGGTTGCTCGTGCTTCGGCTTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCTAAATCTCACAAGAAAGCAGAAGCCAAGGCTCATCACTGAGGTATGGGCTGATTCTGGTCAGCGTGAAAACTTAGGAACCGGTTGAATTTGAAAGCGAATAATACATAGTAGATGGTCACGATCTATTTTCTTTCGTACTTTTTTGTTCTGCATTGGATGACTCTATAGTCACTGAAGAGTCGTGGAGATGTATCTAACCTCGGTCTTAGTGGTCGTATTTGAGTTACACAATTCGTTCTGATGGATGGACGAGAGGGTTATCAGATCATGATTCCTTGATTGAAATGAATAACTTGTTTCCCATCTTTCTTGGTGTTTGGATTATGATTATTGGATTTAAGTAATCTACATTTTTTGTTAGAGGTGTAGTCGGAAAAGTAGGATTAAATCG

Coding sequence (CDS)

ATGGCGCTTCCTCCTGGGCCTTATTCTGGGACCAGCACCCTCGCTTTGGTTGCTCGTGCTTCGGCTTTCTCTGTTGGACTTGTCTACGGAAGCCTCAAGCTCAAGTACCTTCAGGCGAAGGCTAAATCTCACAAGAAAGCAGAAGCCAAGGCTCATCACTGA

Protein sequence

MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
BLAST of CmaCh11G010630 vs. TrEMBL
Match: A0A0A0K2E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G007920 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 6.4e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CmaCh11G010630 vs. TrEMBL
Match: A0A061E0I0_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_006763 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-15
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLK+L+AKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSMKLKFLKAKAKSQKKAEAKAHH 53

BLAST of CmaCh11G010630 vs. TrEMBL
Match: I1LPW2_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G036000 PE=4 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.9e-15
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKSH+KA+ KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSHQKAQEKAHH 53

BLAST of CmaCh11G010630 vs. TrEMBL
Match: A0A0D2NDR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G244100 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 2.5e-15
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKA+S +KAEAKAHH
Sbjct: 1  MASPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKARSQRKAEAKAHH 53

BLAST of CmaCh11G010630 vs. TrEMBL
Match: K7LFD7_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_09G222500 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 4.3e-15
Identity = 45/53 (84.91%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYG++KLKYL+AKAKSH+KA+ KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGTIKLKYLKAKAKSHQKAQEKAHH 53

BLAST of CmaCh11G010630 vs. TAIR10
Match: AT3G01130.1 (AT3G01130.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-13
Identity = 39/53 (73.58%), Postives = 44/53 (83.02%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPG YSGTSTLALVARASAF +GL+YG++KLK L+ K  S  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

BLAST of CmaCh11G010630 vs. TAIR10
Match: AT5G15320.1 (AT5G15320.1 unknown protein)

HSP 1 Score: 72.0 bits (175), Expect = 1.2e-13
Identity = 38/53 (71.70%), Postives = 44/53 (83.02%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          M LPPG YSGTS+LALVARASAF +GLVYG++KLK L+ K+ S KK EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

BLAST of CmaCh11G010630 vs. NCBI nr
Match: gi|659094364|ref|XP_008448021.1| (PREDICTED: uncharacterized protein LOC103490330 [Cucumis melo])

HSP 1 Score: 100.5 bits (249), Expect = 9.2e-19
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH
Sbjct: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 53

BLAST of CmaCh11G010630 vs. NCBI nr
Match: gi|743884256|ref|XP_011037235.1| (PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica])

HSP 1 Score: 90.9 bits (224), Expect = 7.3e-16
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVAR SAFS+GLVYGS+KLKYLQAKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARVSAFSLGLVYGSVKLKYLQAKAKSQKKAEAKAHH 53

BLAST of CmaCh11G010630 vs. NCBI nr
Match: gi|1009149095|ref|XP_015892295.1| (PREDICTED: uncharacterized protein LOC107426588 [Ziziphus jujuba])

HSP 1 Score: 90.5 bits (223), Expect = 9.5e-16
Identity = 48/53 (90.57%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSQKKAEAKAHH 53

BLAST of CmaCh11G010630 vs. NCBI nr
Match: gi|590685060|ref|XP_007042000.1| (Uncharacterized protein TCM_006763 [Theobroma cacao])

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-15
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLK+L+AKAKS KKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSMKLKFLKAKAKSQKKAEAKAHH 53

BLAST of CmaCh11G010630 vs. NCBI nr
Match: gi|356545013|ref|XP_003540940.1| (PREDICTED: uncharacterized protein LOC100527703 [Glycine max])

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-15
Identity = 46/53 (86.79%), Postives = 50/53 (94.34%), Query Frame = 1

Query: 1  MALPPGPYSGTSTLALVARASAFSVGLVYGSLKLKYLQAKAKSHKKAEAKAHH 54
          MA PPGPYSGTSTLALVARASAFS GLVYGS+KLKYL+AKAKSH+KA+ KAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSHQKAQEKAHH 53

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0K2E7_CUCSA6.4e-19100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_7G007920 PE=4 SV=1[more]
A0A061E0I0_THECC1.9e-1588.68Uncharacterized protein OS=Theobroma cacao GN=TCM_006763 PE=4 SV=1[more]
I1LPW2_SOYBN1.9e-1586.79Uncharacterized protein OS=Glycine max GN=GLYMA_12G036000 PE=4 SV=1[more]
A0A0D2NDR3_GOSRA2.5e-1586.79Uncharacterized protein OS=Gossypium raimondii GN=B456_001G244100 PE=4 SV=1[more]
K7LFD7_SOYBN4.3e-1584.91Uncharacterized protein OS=Glycine max GN=GLYMA_09G222500 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G01130.11.2e-1373.58 unknown protein[more]
AT5G15320.11.2e-1371.70 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659094364|ref|XP_008448021.1|9.2e-19100.00PREDICTED: uncharacterized protein LOC103490330 [Cucumis melo][more]
gi|743884256|ref|XP_011037235.1|7.3e-1690.57PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica][more]
gi|1009149095|ref|XP_015892295.1|9.5e-1690.57PREDICTED: uncharacterized protein LOC107426588 [Ziziphus jujuba][more]
gi|590685060|ref|XP_007042000.1|2.8e-1588.68Uncharacterized protein TCM_006763 [Theobroma cacao][more]
gi|356545013|ref|XP_003540940.1|2.8e-1586.79PREDICTED: uncharacterized protein LOC100527703 [Glycine max][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR008386ATP_synth_F0_esu_mt
Vocabulary: Cellular Component
TermDefinition
GO:0000276mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
Vocabulary: Molecular Function
TermDefinition
GO:0015078hydrogen ion transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0015986ATP synthesis coupled proton transport
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015986 ATP synthesis coupled proton transport
cellular_component GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0015078 hydrogen ion transmembrane transporter activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmaCh11G010630.1CmaCh11G010630.1mRNA


Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008386ATPase, F0 complex, subunit E, mitochondrialPFAMPF05680ATP-synt_Ecoord: 12..51
score: 2.
NoneNo IPR availablePANTHERPTHR36028FAMILY NOT NAMEDcoord: 1..53
score: 7.4

The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmaCh11G010630CmaCh19G007060Cucurbita maxima (Rimu)cmacmaB152