CsaV3_6G047390 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_6G047390
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	UPF0434 protein ECH_0194
Location	chr6 : 27961082 .. 27969546 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTCTTCGGCTGTGTATTTAAAAAGCCTTTGGAAGAAGAAATCCAGACTGTGGAAAGGTTGAATACAACTCCTTCAAAACCTCTCCACTTTCTTCCGACTTCATTCTAAAATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTCATCATTATTCCTTTTCGATTCCATCATTTTCAGTCATTCTCCTCAATCTGTGGTGCATAATTTGGTTTTATTTTCTGTTTTTTCATTAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTGTAAGTATCACCTTGAATTCTGTAAAAAAAAAATTGTACTCCGCTATAATTCTTCATCTCTGACCATTTTCTGTTTTCATTGTGATTTTCTTTTTCCTTACTAGCTTTCTGGTTCTTCTTTTAGATCATCTAGGGTGCTGTAGCTGGTTTGTTTTATGAAGTATTTCTCAATTTTGCTAGGTTAGGTAGTAAAAATAGTTGTAGGGATCAGCATCTAGTGTTGAAACCTTTGCTTCTTTTTTTTTCTCTCCTGTTGGAATGCCATCAATCCATTATCTAGCACTATGAATGACCGAGCAAGCATAGGGTTCAGGGAGGTATTCGTATCATATGTTATTTACGATTATAGACTAAAGGTTTAGAGTTAGAGATATATATAAACTCTCTAATCTATTGATGCCCCTTTATTATATGATATGAATAAACTGTTCTCTCTTTGCTTAAAGATATAAGTAGCATAATAGTAGTGAACTACATGGATCTGTATGTTGATGGTTGTTATTTACGCTTTCTTGTTTTCTTTATTTGTCTGTTTTATAACACCCCTTGTTTGGGGGAGTTAGGTTATAGGACATCTGTTTGTTGTATGTTGTAATTTTGCATACTGTTGTGTTAGATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGAGCACTGTTTAGTTTGGGGGTCGAAGACAGTTTTTATTTCTTGAGCTCAATAATCAGAAGAGATGTCAACATAACGCCACAACACTTCACACTTGTATTTGTAAGTTTCCACTTTAGAATGAATTGAATGGTTTCATTTTCTCAAACTCACTGGTGTTGCCCAATAAAATAGTCAGATTAGACCACTTGTCCACAGTTCTTTCTTAGGGTGATTTGAAATTGTTATGGTGGAAACTAAACAAGAGAATATCCTCTAAAATTTTCTGTTCAAAACTTTTGGGCTTGTGCTGAACTATCTGATGGTGATTTGAAAAGTTGCTGGTTTAACCTACCTTTATTCCTTGTTTTCCGTAACATCAACTCCTTATCCTTTGGGTTTAACACAACATACCACAATCGCAGGTGATTTGATAATTGATAATATTTTTCTTCCATGAGGTGAGAAGAACGGGGAAACAGGCGGTGCCATAGTCACGATAGTTATGGTTATGGCTATTATCGTTATTATTATAGTTTTCTACCTTTACCAATTTACTGTTTTTCAAATTGTATAGTGGGCACCATCTCATTGAGTTCTTGATAGTTAAATGGGGGTTGAAGTGTGAAAAACTCTTTGATGGGTTTGCATTCATGCCATCGCAAAAGGCATCAAAGTTGAGTGGCAATATTCAATTGGCTGAGATTGTTCTCAATTCGGAACCAGTCAAGGTTATGCAATACATTTATATTAATTTTGTGAAACTCTTTTTTTAGTAGAGCTTCGTAACCTGATTTAGGAGACTTCTTGTGTAAAATGACGATGTTCAAGTGTTTGGTTTAGTTGTTAATTTCATTCTTCACCCTTGTTGATGCGAGTGAGAATAAATTATCCCGTCCATTTTAGGTGATCTTGTAATAAGTTGGACACGATATTATTTGAAATTTTTTAGACAATTGTTGTGAAAACAAGTGCATCCTTAGAAGCTAAAATTATGTCTGAGCTTGTATTGCATGAAATTCCTGATTTTGGGAGTTCTGTTTAAACTTATATATGTTATTAAGGGGAGCTATTAGAAATCACAAACCATAACCACCAATGGATTGACTAGACTAGCCATTTTGTCAAGGATGCTAAGGTGAGCTTTAAATTGGCATCATCTTCCATTCTAATTAATTGTAGAAGGTTTGATACCTAAAAAATCTGACTAAAAGTTAAACATGTTTTTCTTGGTATTTGAGAAAAAGTACTAAGAGATGTAGACTTCAAACAAATGGAACCATATAAATTATATAAATATACATGAACAAAAGCAATTTAGGGCATGTTCGGCCCGACGAGTAAATTGACAAACTAAAATTAATTATTGAACTTATTAGTGCCTTAACTTATGACGACTAAACAACTTTGTCTCTAATCCTCAACGCTTGGAGTTTAGGAACCTGGGAAATAGGGTTTATTTGGATTTAATTTTTAAGAAAGAAAAAAAGAAGAGAGAAAAATCACCAAACAAGTAAAATAAAGAAGAAGAAGAAGAGAAAAATCTCCCCACCCTGTTTATCCTATAGATGCATTTAACGAAATTCATACAAAGAGCAGCATATGAAACAGGATAAAGAACAAAAGGGTTGCGAGAAATGCAGAAATAATGTTAACTGGTATTCCAAATTCCCATTCTCAAGAATGTTTGTTCCGAAACAAAACGTATCAATAAAATGAAGATATGTCAAGCAAAATAATATATCAATTGGACAAAAAACTTCAGAACATATAATTAGGTGGGGAGTCCAATCTTCAGAAGTTCCTAATGCCTCATCATCATTCAAAGTTGAAAGATATTTATAGAGCAAAACGCCATGGCAAAGTCTCTGATAAAACAATAATAATAAAAGAAGATGGAAAGAACCTTCAAGATTTAGAACAGCAATTGCAGCTCTAGATACTCACCTTGCACAACGAAACTCAAAACATTTCCCAACTTCTTTTACCAATCACCGTGTTGTTTGTTTGTTCTCTCATTGAAGAGCTCGAAGTTCTCTGACCCCAAAGATATCAAAAAACCAGCTTAGGGGCAGCCATGGGGAAGCAAATCAAAATTCCCCCACATCATTAAGTACATGCCACCATCACCAAAAACCAAAATCACAACAAAAAAAGAATATAAACTTAAGAAACAAAGCATACCAGCCAGCCAACAGCAGCCCACAAAACCAAAAATGCTACCCTCCACCATAAAAGGAACTTCTGTTATAGTCTTTTTTTTTTTCTTTTTCTTAATAATTTTTTAAGTTTAAGTTATAGACTTTTTGTTTTTTCTTTTCTTTTTTTTTTTTTCTTTTTTTGTTTAGAAAAATTGTTCCTCCTCCTCTTCAACTTCAGCTTACCAATTTACTTGGCATCAAGAGAAGAGAATATTCGTCGAG

mRNA sequence

ATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGA

Coding sequence (CDS)

ATGGTGAGAATAACCAAAGCCCTTCTGAAGGAAGCGACCTCTGGTTTCACCAACACGCTCTCCCAAATCCTTGTCTGCCCCCTCTCCAAACAACCTCTAAGGTATTGTGCGGCCTCGAATTCTCTCATCAGCGATACGATTGGTGTTTCTTTCCCTATAAGGGACGGAATTCCTTGTTTGGTGCCGAAGGAAGGAAGAATAATTGAAAATGATGATGCATTGAAAGATGAGGATACTGTTGAGATTACTCGAGAAAAATGA

Protein sequence

MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALKDEDTVEITREK

Homology

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_011658060.1 (PREDICTED: protein preY, mitochondrial [Cucumis sativus] >KGN48943.1 hypothetical protein Csa_6G507170 [Cucumis sativus])

HSP 1 Score: 171.8 bits (434), Expect = 1.0e-39
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALKDEDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKDEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_008440859.1 (PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo])

HSP 1 Score: 164.1 bits (414), Expect = 2.2e-37
Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+KALLKEA+SGFTNTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRISKALLKEASSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALK EDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKGEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_022949957.1 (uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 uncharacterized protein LOC111804007 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.1 bits (357), Expect = 8.8e-31
Identity = 71/86 (82.56%), Postives = 76/86 (88.37%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCL
Sbjct: 1  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIE DD LK EDTVEI REK
Sbjct: 61 VPKEGRIIETDDGLKGEDTVEIPREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_022977422.1 (uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima])

HSP 1 Score: 139.8 bits (351), Expect = 4.3e-30
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+++LLKEA SG T TLS+ILVCPLSKQPLRYC ASNSLISDTI VSFPIR G+PCL
Sbjct: 1  MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEG IIE DD LK EDTVEI REK
Sbjct: 61 VPKEGTIIETDDGLKGEDTVEIPREK 86

[Close]

BLAST of CsaV3_6G047390 vs. NCBI nr
Match: XP_022132378.1 (uncharacterized protein LOC111005251 isoform X2 [Momordica charantia])

HSP 1 Score: 128.6 bits (322), Expect = 1.0e-26
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+ ALLK+A SG T TLS+ILVCPL+KQPLRYC ASNSLISDTIGVSFPI+ GIPCL
Sbjct: 1  MVRISGALLKDAGSGLTKTLSEILVCPLTKQPLRYCEASNSLISDTIGVSFPIKGGIPCL 60

Query: 61 VPKEGRIIENDDALKDED 79
          VP++GRIIE DDALK ED
Sbjct: 61 VPRDGRIIETDDALKRED 78

[Close]

BLAST of CsaV3_6G047390 vs. TAIR10
Match: AT4G35905.1 (unknown protein)

HSP 1 Score: 104.8 bits (260), Expect = 2.8e-23
Identity = 50/76 (65.79%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVR+ + LLK+A +    TLS+ILVCPLSKQPLR+C  + SL+SDTIGVSFPI+DGIPCL
Sbjct: 1  MVRLNRVLLKDAGNVIDKTLSEILVCPLSKQPLRFCEKTKSLVSDTIGVSFPIKDGIPCL 60

Query: 61 VPKEGRIIEND-DALK 76
          VPK+G+I+E + DA K
Sbjct: 61 VPKDGKILEEEGDASK 76

[Close]

BLAST of CsaV3_6G047390 vs. Swiss-Prot
Match: sp|Q5M8Z2|PREY_XENTR (Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 4.0e-11
Identity = 34/83 (40.96%), Postives = 55/83 (66.27%), Query Frame = 0


Query: 1   MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
           + R  +  LK++ + F  TL Q LVCPLS++ LRY  ++N LI+D +G+++PI DGIP +
Sbjct: 41  VARSPEQSLKDSKT-FDPTLLQFLVCPLSRKSLRYEESTNELINDELGIAYPIVDGIPNM 100

Query: 61  VPKEGRIIENDDALKDEDTVEIT 84
           +P++ R+I  D   +  DT + T
Sbjct: 101 IPQDARMIHKDRKPESPDTEQTT 122

[Close]

BLAST of CsaV3_6G047390 vs. Swiss-Prot
Match: sp|Q5U1Z8|PREY_RAT (Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 7.6e-10
Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 16  FTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALK 75
           F   L Q LVCPLSK+PLRY A++N LI+D +G+++PI DG+P ++P+  R     +  K
Sbjct: 48  FHPALLQFLVCPLSKKPLRYDASTNELINDELGIAYPIIDGVPNMIPQAARTTRQKE--K 107

Query: 76  DEDT 80
            E+T
Sbjct: 108 QEET 109

[Close]

BLAST of CsaV3_6G047390 vs. Swiss-Prot
Match: sp|Q2T9V7|PREY_BOVIN (Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-09
Identity = 29/66 (43.94%), Postives = 46/66 (69.70%), Query Frame = 0


Query: 16  FTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALK 75
           F   L + LVCPLSK+PLRY A++N LI++ +G+++PI DGIP ++P+  R+   +   K
Sbjct: 50  FDQALLEFLVCPLSKKPLRYEASTNELINEELGIAYPIIDGIPNMIPQAARMTHQN---K 109

Query: 76  DEDTVE 82
            ++ VE
Sbjct: 110 KQEEVE 112

[Close]

BLAST of CsaV3_6G047390 vs. Swiss-Prot
Match: sp|Q96I23|PREY_HUMAN (Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.2e-09
Identity = 30/72 (41.67%), Postives = 47/72 (65.28%), Query Frame = 0


Query: 10  KEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIE 69
           +E    F   L + LVCPLSK+PLRY A++N LI++ +G+++PI DGIP ++P+  R+  
Sbjct: 44  EEPPRDFDPALLEFLVCPLSKKPLRYEASTNELINEELGIAYPIIDGIPNMIPQAARMTR 103

Query: 70  NDDALKDEDTVE 82
                K ++ VE
Sbjct: 104 QS---KKQEEVE 112

[Close]

BLAST of CsaV3_6G047390 vs. Swiss-Prot
Match: sp|Q9D1C3|PREY_MOUSE (Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 2.9e-09
Identity = 26/63 (41.27%), Postives = 44/63 (69.84%), Query Frame = 0


Query: 16  FTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCLVPKEGRIIENDDALK 75
           F   L Q LVCPLSK+PLRY A++N L+++ +G+++PI DGIP ++P+  R    ++  +
Sbjct: 48  FHPALLQFLVCPLSKKPLRYEASTNELVNEELGIAYPIIDGIPNMIPQAARTTRQNEKQE 107

Query: 76  DED 79
           + +
Sbjct: 108 EAE 110

[Close]

BLAST of CsaV3_6G047390 vs. TrEMBL
Match: tr|A0A0A0KHC1|A0A0A0KHC1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 6.8e-40
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALKDEDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKDEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. TrEMBL
Match: tr|A0A1S3B2Q6|A0A1S3B2Q6_CUCME (UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-37
Identity = 82/86 (95.35%), Postives = 84/86 (97.67%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVRI+KALLKEA+SGFTNTLSQILVCPLSKQPLRYC ASNSLISDTIGVSFPIRDGIPCL
Sbjct: 1  MVRISKALLKEASSGFTNTLSQILVCPLSKQPLRYCEASNSLISDTIGVSFPIRDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VPKEGRIIENDDALK EDTVEITREK
Sbjct: 61 VPKEGRIIENDDALKGEDTVEITREK 86

[Close]

BLAST of CsaV3_6G047390 vs. TrEMBL
Match: tr|A0A067JVF8|A0A067JVF8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25368 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.8e-22
Identity = 50/73 (68.49%), Postives = 63/73 (86.30%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVR+ +ALLKEA +G   TL ++LVCPLSKQPLRYC  +NSLISD IGVS+PI+DG+PCL
Sbjct: 1  MVRLNRALLKEARNGINKTLFEVLVCPLSKQPLRYCEETNSLISDAIGVSYPIKDGVPCL 60

Query: 61 VPKEGRIIENDDA 74
          VP++G+I+END A
Sbjct: 61 VPRDGKILENDGA 73

[Close]

BLAST of CsaV3_6G047390 vs. TrEMBL
Match: tr|A0A2I4FD70|A0A2I4FD70_9ROSI (uncharacterized protein LOC108997695 OS=Juglans regia OX=51240 GN=LOC108997695 PE=4 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 4.9e-22
Identity = 53/86 (61.63%), Postives = 67/86 (77.91%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          M R +  +LK+A +G   TLS+ILVCPLSKQPLRYC  +NSLISD IGVSFPI+DGIPCL
Sbjct: 1  MARASFTILKDAGNGLCKTLSEILVCPLSKQPLRYCEETNSLISDAIGVSFPIKDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VP +G+I+E DD  K +D+V+ +  K
Sbjct: 61 VPNDGKIMEADDTPKTDDSVDSSSTK 86

[Close]

BLAST of CsaV3_6G047390 vs. TrEMBL
Match: tr|A0A2R6Q230|A0A2R6Q230_ACTCH (Protein preY like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc24423 PE=4 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-21
Identity = 54/86 (62.79%), Postives = 66/86 (76.74%), Query Frame = 0


Query: 1  MVRITKALLKEATSGFTNTLSQILVCPLSKQPLRYCAASNSLISDTIGVSFPIRDGIPCL 60
          MVR+++ALLK+   G + TLS+ILVCPLSKQPLR C   NSLISD IGVS+PI DGIPCL
Sbjct: 1  MVRVSRALLKDGGLGISKTLSEILVCPLSKQPLRICEERNSLISDAIGVSYPIVDGIPCL 60

Query: 61 VPKEGRIIENDDALKDEDTVEITREK 87
          VP +G+II+N+D  K E  V+   EK
Sbjct: 61 VPNDGKIIDNNDMPKPEGAVDSPDEK 86

The following BLAST results are available for this feature:

BLAST of CsaV3_6G047390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011658060.1	1.0e-39	100.00	PREDICTED: protein preY, mitochondrial [Cucumis sativus] >KGN48943.1 hypothetica...	[more]
XP_008440859.1	2.2e-37	95.35	PREDICTED: UPF0434 protein ECH_0194 [Cucumis melo]	[more]
XP_022949957.1	8.8e-31	82.56	uncharacterized protein LOC111453193 [Cucurbita moschata] >XP_023544418.1 unchar...	[more]
XP_022977422.1	4.3e-30	81.40	uncharacterized protein LOC111477769 isoform X2 [Cucurbita maxima]	[more]
XP_022132378.1	1.0e-26	80.77	uncharacterized protein LOC111005251 isoform X2 [Momordica charantia]	[more]

BLAST of CsaV3_6G047390 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G35905.1	2.8e-23	65.79	unknown protein	[more]

BLAST of CsaV3_6G047390 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q5M8Z2\|PREY_XENTR	4.0e-11	40.96	Protein preY, mitochondrial OS=Xenopus tropicalis OX=8364 GN=pyurf PE=2 SV=1	[more]
sp\|Q5U1Z8\|PREY_RAT	7.6e-10	46.88	Protein preY, mitochondrial OS=Rattus norvegicus OX=10116 GN=Pyurf PE=3 SV=1	[more]
sp\|Q2T9V7\|PREY_BOVIN	2.2e-09	43.94	Protein preY, mitochondrial OS=Bos taurus OX=9913 GN=PREY PE=3 SV=1	[more]
sp\|Q96I23\|PREY_HUMAN	2.2e-09	41.67	Protein preY, mitochondrial OS=Homo sapiens OX=9606 GN=PYURF PE=1 SV=1	[more]
sp\|Q9D1C3\|PREY_MOUSE	2.9e-09	41.27	Protein preY, mitochondrial OS=Mus musculus OX=10090 GN=Pyurf PE=1 SV=1	[more]

BLAST of CsaV3_6G047390 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KHC1\|A0A0A0KHC1_CUCSA	6.8e-40	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G507170 PE=4 SV=1	[more]
tr\|A0A1S3B2Q6\|A0A1S3B2Q6_CUCME	1.4e-37	95.35	UPF0434 protein ECH_0194 OS=Cucumis melo OX=3656 GN=LOC103485154 PE=4 SV=1	[more]
tr\|A0A067JVF8\|A0A067JVF8_JATCU	3.8e-22	68.49	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_25368 PE=4 SV=1	[more]
tr\|A0A2I4FD70\|A0A2I4FD70_9ROSI	4.9e-22	61.63	uncharacterized protein LOC108997695 OS=Juglans regia OX=51240 GN=LOC108997695 P...	[more]
tr\|A0A2R6Q230\|A0A2R6Q230_ACTCH	1.4e-21	62.79	Protein preY like OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc2...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005651	Trm112-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0032259	methylation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0008168	methyltransferase activity
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G047390.1	CsaV3_6G047390.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:2.20.25.10		coord: 23..80 e-value: 3.0E-16 score: 60.9
None	No IPR available	SUPERFAMILY	SSF158997	Trm112p-like	coord: 17..70
IPR005651	Trm112-like	PFAM	PF03966	Trm112p	coord: 19..56 e-value: 8.5E-5 score: 23.0
IPR005651	Trm112-like	PANTHER	PTHR33505	FAMILY NOT NAMED	coord: 10..77

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_6G047390	CSPI06G32040	Wild cucumber (PI 183967)	cpicucB363
CsaV3_6G047390	Cucsa.043840	Cucumber (Gy14) v1	cgycucB028
CsaV3_6G047390	CmaCh03G006670	Cucurbita maxima (Rimu)	cmacucB0809
CsaV3_6G047390	CmoCh03G006920	Cucurbita moschata (Rifu)	cmocucB0793
CsaV3_6G047390	Cp4.1LG10g00100	Cucurbita pepo (Zucchini)	cpecucB0092
CsaV3_6G047390	CsGy6G031580	Cucumber (Gy14) v2	cgybcucB298
CsaV3_6G047390	Carg00573	Silver-seed gourd	carcucB0442
CsaV3_6G047390	Cla014309	Watermelon (97103) v1	cucwmB526
CsaV3_6G047390	MELO3C007931	Melon (DHL92) v3.5.1	cucmeB517
CsaV3_6G047390	ClCG01G020510	Watermelon (Charleston Gray)	cucwcgB455
CsaV3_6G047390	Lsi01G005770	Bottle gourd (USVL1VR-Ls)	cuclsiB462
CsaV3_6G047390	MELO3C007931.2	Melon (DHL92) v3.6.1	cucmedB505
CsaV3_6G047390	Cla97C01G019960	Watermelon (97103) v2	cucwmbB430

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_6G047390	Silver-seed gourd	carcucB0674
CsaV3_6G047390	Silver-seed gourd	carcucB1025
CsaV3_6G047390	Cucumber (Gy14) v2	cgybcucB148
CsaV3_6G047390	Cucumber (Gy14) v1	cgycucB503
CsaV3_6G047390	Cucurbita maxima (Rimu)	cmacucB0412
CsaV3_6G047390	Cucurbita maxima (Rimu)	cmacucB0952
CsaV3_6G047390	Cucurbita maxima (Rimu)	cmacucB1035
CsaV3_6G047390	Cucurbita moschata (Rifu)	cmocucB0406
CsaV3_6G047390	Cucurbita moschata (Rifu)	cmocucB0669
CsaV3_6G047390	Cucurbita moschata (Rifu)	cmocucB0939
CsaV3_6G047390	Cucurbita moschata (Rifu)	cmocucB1019
CsaV3_6G047390	Cucurbita pepo (Zucchini)	cpecucB0133
CsaV3_6G047390	Cucurbita pepo (Zucchini)	cpecucB0282
CsaV3_6G047390	Cucurbita pepo (Zucchini)	cpecucB0353
CsaV3_6G047390	Cucurbita pepo (Zucchini)	cpecucB0618
CsaV3_6G047390	Wild cucumber (PI 183967)	cpicucB184
CsaV3_6G047390	Bottle gourd (USVL1VR-Ls)	cuclsiB437
CsaV3_6G047390	Bottle gourd (USVL1VR-Ls)	cuclsiB480
CsaV3_6G047390	Bottle gourd (USVL1VR-Ls)	cuclsiB498
CsaV3_6G047390	Bottle gourd (USVL1VR-Ls)	cuclsiB515
CsaV3_6G047390	Melon (DHL92) v3.5.1	cucmeB458
CsaV3_6G047390	Melon (DHL92) v3.5.1	cucmeB507
CsaV3_6G047390	Melon (DHL92) v3.6.1	cucmedB447
CsaV3_6G047390	Melon (DHL92) v3.6.1	cucmedB496
CsaV3_6G047390	Watermelon (Charleston Gray)	cucwcgB448
CsaV3_6G047390	Watermelon (Charleston Gray)	cucwcgB532
CsaV3_6G047390	Watermelon (97103) v1	cucwmB475
CsaV3_6G047390	Watermelon (97103) v1	cucwmB500
CsaV3_6G047390	Watermelon (97103) v2	cucwmbB438
CsaV3_6G047390	Watermelon (97103) v2	cucwmbB522
CsaV3_6G047390	Wax gourd	cucwgoB547
CsaV3_6G047390	Wax gourd	cucwgoB648
CsaV3_6G047390	Cucumber (Chinese Long) v3	cuccucB088
CsaV3_6G047390	Cucumber (Chinese Long) v3	cuccucB138
CsaV3_6G047390	Cucumber (Chinese Long) v3	cuccucB146