CmaCh03G006670 (gene) Cucurbita maxima (Rimu)
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACCCTCAATTGCCGACTCTCCGACGTTTCGAAGCAGAAACTCAAACCGCGAAAAATTGAATCCAGCTCAACTTTCTTCAAAGTTCGAAGTAAAATGGTGCGAATAAGCCAATCGCTTCTGAAGGAAGCGGGCTCTGGTCTCACCAAAACTCTCTCTGAGATCCTGGTCTGCCCTCTCTCCAAACAACCTCTAAGGTGATGGTTCCATTTGAATTCATCATTTTCCTTCATTCTCCTCAATCTGTTATGCATAATTTGGTTTCTTGTCTGTTTTGATCGTTAGGTATTGCGAGGCGTCGAATTCTCTAATCAGCGATACGATTCGTGTTTCTTTCCCTGTAAGTACATCAACACTCGGCTTGAATTGTGTAAAAATATGAATTCCAGTATAATTCTTCGCCTATGGCCATTTTCTGTTTTCATTCTGTCTTTCCTTTTCGATACTAGCTCTCGGTTCATTTTTTTAGATCATCTAGAATGCGTAGCTGTTATTCGACTTGCTAGCGAAAGCTCACATTAACTCTTGAGTCATATTAAGACCTACCTACTGGTAGATCGTAGATCAAGACATTCCTTGGTTTCATTAGTTTAATGAAGTATTTCTCAGTTTTTCTGGATTAGGTAGTAAAAATGGCTGTGGGAACCAGAAAGTAGTGTTCAAACCCTCCCCTCATCCGTGGAGTTAGGTTGTAGGTCATGTGCCTGTTTCTATTGTATGTTGTAATTTTACTCATGGTTGTGTTAGATAAGGGGCGGAGTTCCTTGCTTGGTGCCAAAGGAAGGAACGATAATCGAAACTGACGATGGATTGAAAGGTGAGGATACCGTCGAGATTCCTCGAGAAAAATGA AACCCTCAATTGCCGACTCTCCGACGTTTCGAAGCAGAAACTCAAACCGCGAAAAATTGAATCCAGCTCAACTTTCTTCAAAGTTCGAAGTAAAATGGTGCGAATAAGCCAATCGCTTCTGAAGGAAGCGGGCTCTGGTCTCACCAAAACTCTCTCTGAGATCCTGGTCTGCCCTCTCTCCAAACAACCTCTAAGGTATTGCGAGGCGTCGAATTCTCTAATCAGCGATACGATTCGTGTTTCTTTCCCTATAAGGGGCGGAGTTCCTTGCTTGGTGCCAAAGGAAGGAACGATAATCGAAACTGACGATGGATTGAAAGGTGAGGATACCGTCGAGATTCCTCGAGAAAAATGA ATGGTGCGAATAAGCCAATCGCTTCTGAAGGAAGCGGGCTCTGGTCTCACCAAAACTCTCTCTGAGATCCTGGTCTGCCCTCTCTCCAAACAACCTCTAAGGTATTGCGAGGCGTCGAATTCTCTAATCAGCGATACGATTCGTGTTTCTTTCCCTATAAGGGGCGGAGTTCCTTGCTTGGTGCCAAAGGAAGGAACGATAATCGAAACTGACGATGGATTGAAAGGTGAGGATACCGTCGAGATTCCTCGAGAAAAATGA MVRISQSLLKEAGSGLTKTLSEILVCPLSKQPLRYCEASNSLISDTIRVSFPIRGGVPCLVPKEGTIIETDDGLKGEDTVEIPREK
BLAST of CmaCh03G006670 vs. Swiss-Prot
Match: Y3545_HYPNA (UPF0434 protein HNE_3545 OS=Hyphomonas neptunium (strain ATCC 15444) GN=HNE_3545 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.8e-08 Identity = 28/70 (40.00%), Postives = 46/70 (65.71%), Query Frame = 1
BLAST of CmaCh03G006670 vs. Swiss-Prot
Match: PREY_XENTR (Protein preY, mitochondrial OS=Xenopus tropicalis GN=pyurf PE=2 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 5.3e-08 Identity = 25/61 (40.98%), Postives = 42/61 (68.85%), Query Frame = 1
BLAST of CmaCh03G006670 vs. Swiss-Prot
Match: Y313_BRASO (UPF0434 protein BRADO0313 OS=Bradyrhizobium sp. (strain ORS278) GN=BRADO0313 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.6e-07 Identity = 24/61 (39.34%), Postives = 39/61 (63.93%), Query Frame = 1
BLAST of CmaCh03G006670 vs. Swiss-Prot
Match: PREY_RAT (Protein preY, mitochondrial OS=Rattus norvegicus GN=Pyurf PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06 Identity = 22/44 (50.00%), Postives = 34/44 (77.27%), Query Frame = 1
BLAST of CmaCh03G006670 vs. Swiss-Prot
Match: Y126_EHRRG (UPF0434 protein ERGA_CDS_01260 OS=Ehrlichia ruminantium (strain Gardel) GN=ERGA_CDS_01260 PE=3 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-06 Identity = 24/54 (44.44%), Postives = 36/54 (66.67%), Query Frame = 1
BLAST of CmaCh03G006670 vs. TrEMBL
Match: A0A0A0KHC1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G507170 PE=4 SV=1) HSP 1 Score: 140.2 bits (352), Expect = 1.2e-30 Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 1
BLAST of CmaCh03G006670 vs. TrEMBL
Match: B9SYS9_RICCO (Protein preY, mitochondrial, putative OS=Ricinus communis GN=RCOM_0362130 PE=4 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 4.1e-23 Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = 1
BLAST of CmaCh03G006670 vs. TrEMBL
Match: M5VPJ2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025515mg PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.0e-21 Identity = 55/82 (67.07%), Postives = 67/82 (81.71%), Query Frame = 1
BLAST of CmaCh03G006670 vs. TrEMBL
Match: V4UH54_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10026827mg PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-21 Identity = 54/86 (62.79%), Postives = 67/86 (77.91%), Query Frame = 1
BLAST of CmaCh03G006670 vs. TrEMBL
Match: A0A078IA93_BRANA (BnaAnng08300D protein OS=Brassica napus GN=BnaAnng08300D PE=4 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 2.2e-21 Identity = 50/71 (70.42%), Postives = 62/71 (87.32%), Query Frame = 1
BLAST of CmaCh03G006670 vs. TAIR10
Match: AT4G35905.1 (AT4G35905.1 unknown protein) HSP 1 Score: 105.5 bits (262), Expect = 1.6e-23 Identity = 48/71 (67.61%), Postives = 62/71 (87.32%), Query Frame = 1
BLAST of CmaCh03G006670 vs. NCBI nr
Match: gi|659080560|ref|XP_008440859.1| (PREDICTED: protein preY, mitochondrial [Cucumis melo]) HSP 1 Score: 147.1 bits (370), Expect = 1.4e-32 Identity = 73/86 (84.88%), Postives = 77/86 (89.53%), Query Frame = 1
BLAST of CmaCh03G006670 vs. NCBI nr
Match: gi|778719790|ref|XP_011658060.1| (PREDICTED: protein preY, mitochondrial [Cucumis sativus]) HSP 1 Score: 140.2 bits (352), Expect = 1.7e-30 Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 1
BLAST of CmaCh03G006670 vs. NCBI nr
Match: gi|223529261|gb|EEF31233.1| (Protein preY, mitochondrial precursor, putative [Ricinus communis]) HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23 Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = 1
BLAST of CmaCh03G006670 vs. NCBI nr
Match: gi|1000943050|ref|XP_002531148.2| (PREDICTED: UPF0434 protein Pmen_1615 [Ricinus communis]) HSP 1 Score: 115.2 bits (287), Expect = 5.8e-23 Identity = 56/80 (70.00%), Postives = 70/80 (87.50%), Query Frame = 1
BLAST of CmaCh03G006670 vs. NCBI nr
Match: gi|1009144369|ref|XP_015889761.1| (PREDICTED: UPF0434 protein GDI0182/Gdia_2252 [Ziziphus jujuba]) HSP 1 Score: 111.7 bits (278), Expect = 6.4e-22 Identity = 51/72 (70.83%), Postives = 63/72 (87.50%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of Cucurbita maxima
Date Performed: 2017-05-20
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |