CsaV3_5G031590 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G031590
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionPre-mrna-processing factor 17
Locationchr5 : 25757193 .. 25760728 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AAATTGAAAAAGATAATTTAATCTTTCCTCTTTTTTTGTTTTTTCTCTTTCTGAAAAATAGAGAAATGAAGGAGAGATTTCGTTTTTGAAATTTTGATTTATTATCAAATCGAAAATTCCGCACATAGTTTGGATTAATATCAACTCTCTTCCCTTTGATTTGATCTCATCTTGCAACACTAAAACCCTAGAATCAGGTAATTGAATTTCTTCTACTGGGATTCCTTGTCTCTTCTTCTGATTCATCCTTTCTTTCATCGATTTGTCGGTTAAAGTTCGACCTTTGAATCTCTTCATTAGCTACAGAAGAAGGGACAAAGAAGAAGGTTTGCTTTGGTAGGGAAGAAATTGTGAAACTGCTTTAGGGTTTAAAGAAATAGTAGTACTGTACATTTTTTGTTCATTCAATTCCAGGAAGATTTGGTCTGAGTTGTGGCAAGAAGTCAATTCGGCTTCGAATCGTTCAGAGTATAAATCTGCGTTTTTCTCTGTGTTTCGCTGTTATAACTTCGTGGCAGTACAGTTATGGATCTTCTCCAGTCATACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCACCAGAAGCGTCTCCGCCTCGCCTTCTTCCCTCCAAAACCTCGGCGCCTAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCTAATGCCAACCAAACCCTTTCGAAGCCGATAGACCCAACTCAGCATCTTGTTGCGTTCAACCCCACTTACGATCAACTATGGGCGCCCATTTATGGCCCATCTCATCCCTATGCCAAGGATGGAATTGCACAGGGAATGCGGAACCACAAGCTAGGGTTTGTGGAGAATGCGTCCATTGAGCCATTTGTTTTCGATGAGCAGTACAATACGTTCCATAAATACGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGATATGGAGGCTTTGGAGAAGAATGATGCCATTTCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGAAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAAGATATGGAAGAGGAGGTGAACCCGGCTGAAGTTGATAATCCAGCTTCTGATGTTTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTCTGCAAACCGAGCTAACTGAAGAGCAGAAGAAATATGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACATCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTACCAGGGTAGATCTTGGATTGCACCACCAAAGGATGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTAATTCTTTCAGCTGGTATGGACACCAAAGTGAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCGGTTCGGGACATTTCATTTTGTAATGATGGATCTAAGTTTCTGACCGCCGGATATGATAAAAAGATCAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCTACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATCTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAATGGGATATGAACACAGGACAGATTACACAGGAGTATGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTTACATCGAGCGATGACAAGTCTCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATCAGTGAGCCTCACATGCATTCCATGCCCTCTATTTCTGTACATCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCTCCAGATGGACGTTTTGTCATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTAAAGTGTCACGAGGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACATGCGGATGGGATGGACTGATAAAGTATTGGTAAGTAAATCCCTTTACCTTGGTCTGATACTTTTTTATATTTTGCTTTAAACATTTAATAGGCCATGCTAATTCATGTTTCTTTTACCCTTCAGCATGGTATATTTCTTTTAGAGATAGTTCTGCAGTGAGGGTCAACTATCTCGGGGTTTTGTTGATTATGTGGTGTTCTTTATGACTCTTTGTATGTATTAGTATCTGGATGCAACTTTGGTTATCTTCTTGCATGTTACATCTTGTTAATTAGACTGTGACCCAAAACGACTGGCTTAAAGATTTCAGCTATTTTCTGTTGTTTATATGAACCCTTAGCCGTCATAGTAAATATGAATTATGCTTTGGAGGTTGCTGACAGCCTACGTTTTCCTGTTAGCGAATTCATTGTTCATAGTAACTGTTGATGATTTCACATTGTGGCGAAAGCCTTCATGCCTTGTTGGTATTGCAATAGCGGGAACCTAACGATGTTTCTTCCTTTGTGGGCTTGAGTATTGACCATAACCGGCTTTGCCAATATCTTTTAGTTAGTCATTACAATTGTGTTCTTGTGCACTAAAATTCATTCTGTTATTTCACATGTGAGTCTGTGTAGCTGAAGGTAAGGGATCATTCTGGTTGGTTTTCTTAATCGGTTTAAATATCCATGGCCATTACTATATATAATCTATTTGTAATGCATCAGCCTCTGCACTCTTTGTCATGTGGTATGCAATCGGTCCTCATTGTAATGTTGATGACGAACAATGCATCTTTACTATTTGATTTTGACACGTGGTGTTTGAATGAGACTTTTGGTTTGAAGAACTTCATCTTTTGGGGATGAGATTAGTTGTGTGGATTGATCTTTTTTCTGCTCTCGCTATTTTATACTGCAGAAAATTAAATTTTGTTTGTGGATTGCAGGGACTAGATTTAAGGCTGAGATCATCTTTGGAAGCCACAAGAACAAGGAAATTTCTGGGTGAAAATCTGCCCTTAAAGAATGAGTGTATCTTAACTTGAATTTTGTGTTAGATCAAATCACCTTAGTTTAGTTATCCCAATGACATTGTACTGTTAGCTTCTTACATTTTTGTATACTGAATTAATACAACATTACTTCGTTCAACTTTATGGTGTAGTTCATTTTCCCTCACCTGTTTTGGATTTGTGTAAAACCGTTACTCACTAAAAAGGAAAAAAAGAAAACAAGTTTGATTTGATTTGTGTAAAGCATTTTGAGAATTATAGATTTGAGGTTTGATTTTGTGTGGAAACACTATTAAAGTTTTG

mRNA sequence

ATGGATCTTCTCCAGTCATACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCACCAGAAGCGTCTCCGCCTCGCCTTCTTCCCTCCAAAACCTCGGCGCCTAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCTAATGCCAACCAAACCCTTTCGAAGCCGATAGACCCAACTCAGCATCTTGTTGCGTTCAACCCCACTTACGATCAACTATGGGCGCCCATTTATGGCCCATCTCATCCCTATGCCAAGGATGGAATTGCACAGGGAATGCGGAACCACAAGCTAGGGTTTGTGGAGAATGCGTCCATTGAGCCATTTGTTTTCGATGAGCAGTACAATACGTTCCATAAATACGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGATATGGAGGCTTTGGAGAAGAATGATGCCATTTCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGAAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAAGATATGGAAGAGGAGGTGAACCCGGCTGAAGTTGATAATCCAGCTTCTGATGTTTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTCTGCAAACCGAGCTAACTGAAGAGCAGAAGAAATATGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACATCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTACCAGGGTAGATCTTGGATTGCACCACCAAAGGATGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTAATTCTTTCAGCTGGTATGGACACCAAAGTGAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCGGTTCGGGACATTTCATTTTGTAATGATGGATCTAAGTTTCTGACCGCCGGATATGATAAAAAGATCAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCTACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATCTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAATGGGATATGAACACAGGACAGATTACACAGGAGTATGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTTACATCGAGCGATGACAAGTCTCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATCAGTGAGCCTCACATGCATTCCATGCCCTCTATTTCTGTACATCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCTCCAGATGGACGTTTTGTCATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTAAAGTGTCACGAGGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACATGCGGATGGGATGGACTGATAAAGTATTGGGACTAG

Coding sequence (CDS)

ATGGATCTTCTCCAGTCATACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCACCAGAAGCGTCTCCGCCTCGCCTTCTTCCCTCCAAAACCTCGGCGCCTAAGGTTGATGATACAATGTTAGCCCTCACGGTGGCTAATGCCAACCAAACCCTTTCGAAGCCGATAGACCCAACTCAGCATCTTGTTGCGTTCAACCCCACTTACGATCAACTATGGGCGCCCATTTATGGCCCATCTCATCCCTATGCCAAGGATGGAATTGCACAGGGAATGCGGAACCACAAGCTAGGGTTTGTGGAGAATGCGTCCATTGAGCCATTTGTTTTCGATGAGCAGTACAATACGTTCCATAAATACGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGATATGGAGGCTTTGGAGAAGAATGATGCCATTTCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGAAAGATTGAGAAAAAGAAAGAAATGAGTGAGAATGAAGATATGGAAGAGGAGGTGAACCCGGCTGAAGTTGATAATCCAGCTTCTGATGTTTGGTTGATGAAGAATAGGAAGAGTCCATGGTCTGGAAAGAAGGAAGGTCTGCAAACCGAGCTAACTGAAGAGCAGAAGAAATATGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACATCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTACCAGGGTAGATCTTGGATTGCACCACCAAAGGATGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTAATTCTTTCAGCTGGTATGGACACCAAAGTGAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCGGTTCGGGACATTTCATTTTGTAATGATGGATCTAAGTTTCTGACCGCCGGATATGATAAAAAGATCAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCTACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATCTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAATGGGATATGAACACAGGACAGATTACACAGGAGTATGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTTACATCGAGCGATGACAAGTCTCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATCAGTGAGCCTCACATGCATTCCATGCCCTCTATTTCTGTACATCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCTCCAGATGGACGTTTTGTCATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTAAAGTGTCACGAGGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACATGCGGATGGGATGGACTGATAAAGTATTGGGACTAG

Protein sequence

MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDMEEEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Homology
[Close]
BLAST of CsaV3_5G031590 vs. NCBI nr
Match: XP_011655627.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus] >KGN51808.1 hypothetical protein Csa_5G601580 [Cucumis sativus])

HSP 1 Score: 1014.2 bits (2621), Expect = 1.7e-292
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CsaV3_5G031590 vs. NCBI nr
Match: XP_004135243.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus])

HSP 1 Score: 1011.9 bits (2615), Expect = 8.7e-292
Identity = 580/580 (100.00%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CsaV3_5G031590 vs. NCBI nr
Match: XP_008446211.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 pre-mRNA splicing factor [Cucumis melo subsp. melo])

HSP 1 Score: 1011.1 bits (2613), Expect = 1.5e-291
Identity = 578/581 (99.48%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CsaV3_5G031590 vs. NCBI nr
Match: XP_008446212.1 (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo])

HSP 1 Score: 1008.8 bits (2607), Expect = 7.3e-291
Identity = 577/580 (99.48%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CsaV3_5G031590 vs. NCBI nr
Match: XP_022966828.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1002.7 bits (2591), Expect = 5.3e-289
Identity = 549/581 (94.49%), Postives = 555/581 (95.52%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKI             
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
                       SDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CsaV3_5G031590 vs. TAIR10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 813.9 bits (2101), Expect = 6.3e-236
Identity = 450/583 (77.19%), Postives = 485/583 (83.19%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDL+QSY ++++       + SSPE+SPPR+L +K+SAP+VDDT LALTVAN NQ+ SKP
Sbjct: 1   MDLIQSYEEEDE------AVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP++GP+HPYAKDGIAQGMRNHKLG VE+ASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHK GYAADPS   G NY+GD+EA +KND +SV+NIPQ EQK+RKI  XXXXXXXXXXX
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKI-EXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXX               KKE +Q E        XXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXKKEVVQGELTEEQKKYXXXXXXXXXXXXXXXXX 240

Query: 241 XXT--SDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           XX   +DKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 XXXXYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXX 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F ND    XXXXX    
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFXXXXXDKNI 360

Query: 361 XXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQ 420
                ETGQVISTFSTGKIPYVVKLNPDDDKQNILLA                   EYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           WK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573

[Close]
BLAST of CsaV3_5G031590 vs. TAIR10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 174.9 bits (442), Expect = 1.5e-43
Identity = 92/312 (29.49%), Postives = 153/312 (49.04%), Query Frame = 0 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDXXXXXXXXXXXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAX 397
           V+D+ +                     E G    +F   ++  VVK +PD+   N+ L+ 
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 398 XXXXXXXXXXXXXXXXXXEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEF 457
                             EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

Query: 578 TCGWDGLIKYWD 582
            C W+G +  ++
Sbjct: 448 ACSWNGQVSVFE 457

[Close]
BLAST of CsaV3_5G031590 vs. TAIR10
Match: AT4G32551.2 (LisH dimerisation motif;WD40/YVTN repeat-like-containing domain)

HSP 1 Score: 49.3 bits (116), Expect = 9.4e-06
Identity = 23/58 (39.66%), Postives = 31/58 (53.45%), Query Frame = 0 

Query: 285 TWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISF 343
           T   HT  ++ IRF P    L  S+  D  V++WD  N G  +RT+MGHS  V  + F
Sbjct: 726 TLEEHTAMITDIRFSPSQLRLATSS-FDKTVRVWDADNKGYSLRTFMGHSSMVTSLDF 782

[Close]
BLAST of CsaV3_5G031590 vs. TAIR10
Match: AT2G16405.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 44.7 bits (104), Expect = 2.3e-04
Identity = 31/115 (26.96%), Postives = 55/115 (47.83%), Query Frame = 0 

Query: 419 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHP-NTNW 478
           H   V    F  NN+   +SS DK++RVWE    V I+ I    +     I  HP N N+
Sbjct: 215 HSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQYCIRFHPVNNNF 274

Query: 479 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG 533
           L+A + + ++ +++     ++ KK  F   + +     ++    G+ +  GDG+G
Sbjct: 275 LSAGNANKELTVFNF-STGRIIKKLLFEDEVTS-----MDHDHTGQIIFCGDGQG 321

[Close]
BLAST of CsaV3_5G031590 vs. Swiss-Prot
Match: sp|O60508|PRP17_HUMAN (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 3.8e-129
Identity = 245/572 (42.83%), Postives = 318/572 (55.59%), Query Frame = 0 

Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYNTFHKYGYAADPSA---SAG 139
           P +GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXXXXXXXXXXXXXXSDVW 199
             YIG +E  EKN  ++V+   Q + +KRK                          +D  
Sbjct: 160 AKYIGSVEEAEKNQGLTVFETGQKKTEKRK----------------------KFKENDAS 219

Query: 200 LMKNRKSPWSG-KKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXTSDKSTFHGKEER 259
            +     PW+    E    +                             +K+  H KE  
Sbjct: 220 NIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGEEKTILHVKEMY 279

Query: 260 DYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSA 319
           DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP  GHL+LS 
Sbjct: 280 DYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSC 339

Query: 320 GMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXXXXXETGQVI 379
            MD K+K+W+V+   +C+RT++GHS+AVRDI F                     ETGQ I
Sbjct: 340 SMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCI 399

Query: 380 STFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHLGAVNTITFV 439
           S F+  K+PY VK NPD+DKQN+ +A                   EYD+HLGAVNTI FV
Sbjct: 400 SRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFV 459

Query: 440 DNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILI 499
           D NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQILI
Sbjct: 460 DENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILI 519

Query: 500 YSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLK 559
           +  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++   K
Sbjct: 520 FGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFK 579

Query: 560 CHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
            H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 580 AHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of CsaV3_5G031590 vs. Swiss-Prot
Match: sp|Q9DC48|PRP17_MOUSE (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 463.4 bits (1191), Expect = 3.8e-129
Identity = 234/531 (44.07%), Postives = 303/531 (57.06%), Query Frame = 0 

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP +GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSA---SAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXX 180
           TF  YGYA DPS         YIG +E  EKN  ++V+   Q + +KRK           
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRK----------- 191

Query: 181 XXXXXXXXXXXXXXXSDVWLMKNRKSPWSG-KKEGLQTEXXXXXXXXXXXXXXXXXXXXX 240
                          +D   +     PW+    E    +                     
Sbjct: 192 -----------KFKENDASNIDGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK 251

Query: 241 XXXXXXTSDKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHT 300
                   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WSGHT
Sbjct: 252 QEEEKPGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWSGHT 311

Query: 301 KGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXX 360
           KGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F        
Sbjct: 312 KGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGTQFL 371

Query: 361 XXXXXXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXX 420
                        ETGQ IS F+  K+PY VK NPD+DKQN+ +A               
Sbjct: 372 SAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSG 431

Query: 421 XXXXEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS 480
               EYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP+++
Sbjct: 432 EIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVT 491

Query: 481 VHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 540
           + PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG
Sbjct: 492 LSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDG 551

Query: 541 EGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
            GK   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 552 NGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of CsaV3_5G031590 vs. Swiss-Prot
Match: sp|O43071|PRP17_SCHPO (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 2.8e-84
Identity = 146/346 (42.20%), Postives = 202/346 (58.38%), Query Frame = 0 

Query: 243 TSDKSTFHGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAI 302
           + +++  H     DYQ RS++  P D       +     CYIPK+ + TW GHTKG+S +
Sbjct: 213 SKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKGHTKGISCL 272

Query: 303 RFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXX 362
           RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  D           
Sbjct: 273 RFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFLSTSFDK 332

Query: 363 XXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEY 422
                  E G+ ++ F++ ++   VK   D DK N  LA                    Y
Sbjct: 333 TIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSPDIVQAY 392

Query: 423 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTN 482
           D HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++  MHSMP +++ PN  
Sbjct: 393 DHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVALRPNGK 452

Query: 483 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 542
            +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV SGD  G   F
Sbjct: 453 SIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSGDSSGNACF 512

Query: 543 WDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 582
           WDWKTCK+   L  H G      +HP E SKVAT    DG IKYWD
Sbjct: 513 WDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYWD 558

[Close]
BLAST of CsaV3_5G031590 vs. Swiss-Prot
Match: sp|P40968|PRP17_YEAST (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 6.1e-63
Identity = 117/343 (34.11%), Postives = 185/343 (53.94%), Query Frame = 0 

Query: 247 STFHGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 306
           S F+GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F P
Sbjct: 113 SHFYGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLP 172

Query: 307 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 366
           K GHLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D               
Sbjct: 173 KTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKI 232

Query: 367 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNIL-LAXXXXXXXXXXXXXXXXXXXEYDQH 426
              ETG+V +       P  V+  P +  + I+ L+                    YD H
Sbjct: 233 WDTETGKVKTRLHLNSTPADVESRPTNPHEFIVGLSNSKILHYDDRVSENQGLVQTYDHH 292

Query: 427 LGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLA 486
           L ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  
Sbjct: 293 LSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFC 352

Query: 487 AQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 546
           AQS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW
Sbjct: 353 AQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDW 412

Query: 547 KTCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLIKYWD 582
            T ++   +K      I   +WHP E SKV   G  G I   D
Sbjct: 413 NTSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKIYVCD 455

[Close]
BLAST of CsaV3_5G031590 vs. Swiss-Prot
Match: sp|E9Q349|WDR25_MOUSE (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-32
Identity = 83/313 (26.52%), Postives = 145/313 (46.33%), Query Frame = 0 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDXXXXXXXXXXXXXXXXXXETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +                     ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AXXXXXXXXXXXXXXXXXXXEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
                                Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           +F     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]
BLAST of CsaV3_5G031590 vs. TrEMBL
Match: tr|A0A0A0KQ97|A0A0A0KQ97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 1014.2 bits (2621), Expect = 1.2e-292
Identity = 581/581 (100.00%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CsaV3_5G031590 vs. TrEMBL
Match: tr|A0A1S3BFC4|A0A1S3BFC4_CUCME (pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1011.1 bits (2613), Expect = 9.8e-292
Identity = 578/581 (99.48%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CsaV3_5G031590 vs. TrEMBL
Match: tr|E5GBJ7|E5GBJ7_CUCME (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 1011.1 bits (2613), Expect = 9.8e-292
Identity = 578/581 (99.48%), Postives = 581/581 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CsaV3_5G031590 vs. TrEMBL
Match: tr|A0A1S3BE12|A0A1S3BE12_CUCME (pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 1008.8 bits (2607), Expect = 4.9e-291
Identity = 577/580 (99.48%), Postives = 580/580 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CsaV3_5G031590 vs. TrEMBL
Match: tr|A0A2P4M3M5|A0A2P4M3M5_QUESU (Pre-mrna-processing factor 17 OS=Quercus suber OX=58331 GN=CFP56_08853 PE=4 SV=1)

HSP 1 Score: 926.0 bits (2392), Expect = 4.1e-266
Identity = 481/592 (81.25%), Postives = 506/592 (85.47%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDD--------GSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVAN 60
           MDLLQ+Y DQND+D         +P   TSSPEASPPRLLP+K++APKVDDTMLALTVA 
Sbjct: 1   MDLLQTYKDQNDEDIGELEDQIQNPISTTSSPEASPPRLLPAKSAAPKVDDTMLALTVAQ 60

Query: 61  ANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEP 120
           ANQ  S+PIDP QH+VA+NPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVE+ASIE 
Sbjct: 61  ANQAHSRPIDPVQHVVAYNPTYDQLWAPIVGPAHPYAKDGIAQGMRNHKLGFVEDASIES 120

Query: 121 FVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXX 180
           FVFDEQYNTFHKYGYAADPSASAGNNY+GD++AL+KNDAI+VYNIPQHEQKKRKIXXXXX
Sbjct: 121 FVFDEQYNTFHKYGYAADPSASAGNNYVGDLDALQKNDAITVYNIPQHEQKKRKIXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXS-DVWLMKNRKSPWSGKKEGLQTE--XXXXXXXXXXXXXX 240
           XXXXXXXXXXX         S D WLMKNRKSPW+GKKEGLQ+E                
Sbjct: 181 XXXXXXXXXXXVDKIELQNPSTDTWLMKNRKSPWAGKKEGLQSELTEEQKKYAEEYAKKK 240

Query: 241 XXXXXXXXXXXXXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGH 300
                          DKSTFHGKEERDYQGRSWIAPPKDAKA NDHCYIPKRLVHTWSGH
Sbjct: 241 GEERERGGEKGEILLDKSTFHGKEERDYQGRSWIAPPKDAKANNDHCYIPKRLVHTWSGH 300

Query: 301 TKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXX 360
           TKGVSAIRFFPKHGHL+LSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDI FCND    
Sbjct: 301 TKGVSAIRFFPKHGHLLLSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDIWFCNDGTKF 360

Query: 361 XXXXXXXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXX 420
                         ETGQVISTFSTGKIPYVV+LNPDDDKQNILLA   XXXXXXXXXXX
Sbjct: 361 LTAGYDKNIKYWDTETGQVISTFSTGKIPYVVRLNPDDDKQNILLAGMSXXXXXXXXXXX 420

Query: 421 XXXXXEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 480
           XXX  EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI
Sbjct: 421 XXXTQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI 480

Query: 481 SVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 540
           S+HP+TN+LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD
Sbjct: 481 SLHPSTNYLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGD 540

Query: 541 GEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           GEGKCWFWDWKTC+VFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 GEGKCWFWDWKTCRVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 592

The following BLAST results are available for this feature:
BLAST of CsaV3_5G031590 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011655627.11.7e-292100.00PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus] >KGN51808.... [more]
XP_004135243.18.7e-292100.00PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus][more]
XP_008446211.11.5e-29199.48PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo] >ADN33838.1 p... [more]
XP_008446212.17.3e-29199.48PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo][more]
XP_022966828.15.3e-28994.49pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima][more]
BLAST of CsaV3_5G031590 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10580.16.3e-23677.19Transducin/WD40 repeat-like superfamily protein[more]
AT5G54520.11.5e-4329.49Transducin/WD40 repeat-like superfamily protein[more]
AT4G32551.29.4e-0639.66LisH dimerisation motif;WD40/YVTN repeat-like-containing domain[more]
AT2G16405.12.3e-0426.96Transducin/WD40 repeat-like superfamily protein[more]
BLAST of CsaV3_5G031590 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O60508|PRP17_HUMAN3.8e-12942.83Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1[more]
sp|Q9DC48|PRP17_MOUSE3.8e-12944.07Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1[more]
sp|O43071|PRP17_SCHPO2.8e-8442.20Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
sp|P40968|PRP17_YEAST6.1e-6334.11Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
sp|E9Q349|WDR25_MOUSE1.1e-3226.52WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1[more]
BLAST of CsaV3_5G031590 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KQ97|A0A0A0KQ97_CUCSA1.2e-292100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601580 PE=4 SV=1[more]
tr|A0A1S3BFC4|A0A1S3BFC4_CUCME9.8e-29299.48pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
tr|E5GBJ7|E5GBJ7_CUCME9.8e-29299.48Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3BE12|A0A1S3BE12_CUCME4.9e-29199.48pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
tr|A0A2P4M3M5|A0A2P4M3M5_QUESU4.1e-26681.25Pre-mrna-processing factor 17 OS=Quercus suber OX=58331 GN=CFP56_08853 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0071013catalytic step 2 spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR032847PRPF17
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G031590.1CsaV3_5G031590.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 228..261
NoneNo IPR availableCDDcd00200WD40coord: 282..581
e-value: 5.48631E-69
score: 226.062
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 306..320
score: 33.9
coord: 435..449
score: 29.36
coord: 349..363
score: 29.88
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 409..448
e-value: 2.6E-6
score: 37.0
coord: 323..362
e-value: 4.4E-10
score: 49.5
coord: 497..538
e-value: 0.14
score: 21.2
coord: 365..406
e-value: 3.6
score: 13.5
coord: 452..491
e-value: 10.0
score: 10.6
coord: 279..319
e-value: 6.9E-9
score: 45.5
coord: 541..581
e-value: 3.5E-6
score: 36.6
IPR001680WD40 repeatPFAMPF00400WD40coord: 324..362
e-value: 4.6E-6
score: 27.2
coord: 544..581
e-value: 0.086
score: 13.7
coord: 503..538
e-value: 0.027
score: 15.2
coord: 410..447
e-value: 0.0012
score: 19.5
coord: 281..319
e-value: 4.4E-6
score: 27.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 330..371
score: 15.421
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 548..581
score: 8.57
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 416..448
score: 12.614
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 286..320
score: 12.881
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 266..581
e-value: 1.1E-95
score: 322.5
IPR032847Pre-mRNA-processing factor 17PANTHERPTHR43979FAMILY NOT NAMEDcoord: 1..581
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 306..320
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 286..581
score: 45.375
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 277..581

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G031590CSPI05G22710Wild cucumber (PI 183967)cpicucB284
CsaV3_5G031590Cucsa.286030Cucumber (Gy14) v1cgycucB441
CsaV3_5G031590CmaCh04G017290Cucurbita maxima (Rimu)cmacucB0886
CsaV3_5G031590CmoCh18G008050Cucurbita moschata (Rifu)cmocucB0484
CsaV3_5G031590CmoCh04G018120Cucurbita moschata (Rifu)cmocucB0875
CsaV3_5G031590Cp4.1LG09g05060Cucurbita pepo (Zucchini)cpecucB0051
CsaV3_5G031590Cp4.1LG01g15330Cucurbita pepo (Zucchini)cpecucB0544
CsaV3_5G031590CsGy5G022230Cucumber (Gy14) v2cgybcucB232
CsaV3_5G031590Carg14344Silver-seed gourdcarcucB0274
CsaV3_5G031590Carg14466Silver-seed gourdcarcucB0762
CsaV3_5G031590Cla010088Watermelon (97103) v1cucwmB428
CsaV3_5G031590MELO3C011999Melon (DHL92) v3.5.1cucmeB381
CsaV3_5G031590ClCG05G025310Watermelon (Charleston Gray)cucwcgB415
CsaV3_5G031590Lsi04G005460Bottle gourd (USVL1VR-Ls)cuclsiB393
CsaV3_5G031590MELO3C011999.2Melon (DHL92) v3.6.1cucmedB375
CsaV3_5G031590Cla97C05G107460Watermelon (97103) v2cucwmbB398
CsaV3_5G031590Bhi07G001379Wax gourdcucwgoB523
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G031590Cucumber (Gy14) v2cgybcucB042
CsaV3_5G031590Cucumber (Gy14) v1cgycucB112
CsaV3_5G031590Cucurbita maxima (Rimu)cmacucB0217
CsaV3_5G031590Cucurbita maxima (Rimu)cmacucB0495
CsaV3_5G031590Cucurbita maxima (Rimu)cmacucB0505
CsaV3_5G031590Cucurbita maxima (Rimu)cmacucB0948
CsaV3_5G031590Cucurbita moschata (Rifu)cmocucB0207
CsaV3_5G031590Cucurbita moschata (Rifu)cmocucB0934
CsaV3_5G031590Cucurbita pepo (Zucchini)cpecucB0048
CsaV3_5G031590Cucurbita pepo (Zucchini)cpecucB0130
CsaV3_5G031590Cucurbita pepo (Zucchini)cpecucB0518
CsaV3_5G031590Cucurbita pepo (Zucchini)cpecucB1029
CsaV3_5G031590Wild cucumber (PI 183967)cpicucB048
CsaV3_5G031590Bottle gourd (USVL1VR-Ls)cuclsiB372
CsaV3_5G031590Melon (DHL92) v3.5.1cucmeB393
CsaV3_5G031590Melon (DHL92) v3.6.1cucmedB388
CsaV3_5G031590Watermelon (Charleston Gray)cucwcgB400
CsaV3_5G031590Wax gourdcucwgoB509
CsaV3_5G031590Cucumber (Chinese Long) v3cuccucB040
CsaV3_5G031590Cucumber (Chinese Long) v3cuccucB132
CsaV3_5G031590Silver-seed gourdcarcucB0536
CsaV3_5G031590Silver-seed gourdcarcucB0659