CmoCh18G008050 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh18G008050
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPre-mRNA-processing factor 17
LocationCmo_Chr18 : 9496254 .. 9500846 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGATTTGAGTTGCAAGATTATTGTTGATTAAGCTCAAATCTAATTTGCCATTTTGTTTGGGGTTAATTTCGATTCGGCTGCTTGATTTGATATGATCCGATCTTGCAAACCCTAGCATGAGGTAATCGAGTATCTTCGTGTTCATTCTCCGTCTCTTCTTCTGATTCATCGTTTATTTAATCTGTTTTTCGGTTAAGTTTCGGCCATTGAATCTCTTCCTTAGCTTCAGAAGCGGGGGGAAGAGGTTTTCTTTGGTTGGGAAGAATTGTGGAACCGTGTGTAATTGGATCTTGACGGAAGAGTAGTCTAGATTTTTGTTGATTCAGTTCCAGGAAGATTCGGGCTGAGCTGTGGAAGGGTGTAAATCAGGGGGTTTTCTGTGTTTCTCTGTTCTCTCTAGCTTTGGGGAATTATACTTATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCGCCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCTACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTTGGGCCATCTCATCCCTATGCGAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTAGGCTTTGTTGAGGATGCGTCCATTGAGCCGTTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCGACTGGGAAAATTCCTTACGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGACAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGACGGACGCTTTGTTATGTCTGGCGACGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAAGTAAATCCCTTTATTCTTATAAATGTTTAATGGAGGTTATGCTAATTCATCCTTCTTTTATCCTTCACTATGTCATATTTCTTTTCAATGGCTCTGCAGTATGATGATCAAATGTTCATTAAATTTGGATTTCTCTACTGCCTTTGGTGTTTTTTTTTTTATTGAGATCTTCCTATTGGCCTAGCTTTTTAGTATTTGAATGCAACTTCTTTACCCGGTGGCCTCGTTATCCACACATCTGGTAGGATGAATGGAGGACCGACCCGGGTTTTCATGAGGCACCAAAACAACTGACTTCAATATTTGAAGTCATTTTTCTGTTGTTTTGGGAACTAGCTTTAGTTGTCAAAGGACTTGATAGGAACTAAACTTTGGAGTTTGGGTATTATTTTCTGCTAGTGAATCCATTGTTTCACAGTTATTGTGGAATATCCATATTTTGGTAAAGATTTTCATGCCTTCTGTAATTGTCACGGCTAGGACCAAATGGTTTTTGCCTGTGGTGGCAACTGAAGTTTTGATTTGATAGAAAAGCCTAAGTAGTTTTATCAAAATCTTTTTGTTTTAATGCTCAACTGATTTGTATTTGTTATTCTACACCTCCTGCCTTCGTCATGTGATTCTTAGATTTTGTTATGCTGCTAAATTTTTAGATTCCTCGATGATAAAATGTGTTATACCATTCATATTCTTGAACTTGTAACGTACGGTAAGTATGGATCGTTTGAATGGTTTTCTTCCTCAAGTGAAGTAGCCATTAGTCATTCCTGTTCTTTTCCTACAATCAAATTTGTTCTACTATTCACCTTATCCGACTCTAGCTTTCAGCAAGTATGAATCATTCTGGATGATTTTCTTATTCATGAAAAAAAGGGAGCCGGTTTGCAACGGTTCAAGCCCACCCGCTAGCATATGTTGTCCTCTTTGAGTTTTCCCTTTTGCCTTCAAAGTTTTTAAGATGCATATGCTAGGGAGAGGTTTCTATACCCTTATAAAGAGTGTTCCGTTCTCCTCCCGACCGACGTGGGATCTCATGGCTATTACTATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGCGTATGCTAGGAGGAGGTTTCCACACCCTTATAAGGGGTGTTTGTTTCATTCTCCTCCCCAACCGACTGGGATCCCATGGCTATTACTATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGCGTATGCTAGGAGGAGGTTTCCACACCCTTATAAAGGGTGTTTGTTTCATTCTCCTCCCCAACCGACTGGGATCCCATGGCTATTACTATTTTTTGAGCTTCCCTTCAAGGTTTTTAAAACGCGTATGCTAGGAGGAGGTTTCCACACCCTTATAAAGGGTGTTTGTTTCATTCTCCTCCCCAACTGACTGGGATCCCATGGCTATTACTATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGCGTATGCTAGGAGGAGGTTTCCACACCCCTTATAAAGGGTGTTCCGTTCTCCTCCCCAACCGACGTGGGATCTCATGGTTATTACCATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGTGTATGCTAGGAAGAGGTTTCCACACCCTTATAAAGAGTGTTTCGTTCTCCTCCCCAACCAACGTGGGATCTCATGGTTATTACCATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGTGTATGCTAGGAAGAGGTTTCCACACCCTTATAAAGAGTGTTTCGTTCTCCTCCCCAACCAACGTGGGATCTCATAGTTATTACCATTTTTCAAGCTTCCCTTCAAGGTTTTTAAAACACATATGCTTGGAAGAGGTTTTCACACCCTTATAAAGTGTGCTCCATTCTCCTCCCCAACCGATGTGGGATCTCAGGACCCTTACTATTTTTCATATACTTGTCATATCATCTTGTAATTCATCTTTCTTTTACTGTTTGATTGGCACATGATTGAATGAGACATTGGGAAATAGTTCATCATTGGGAATAGTTGTGGAATGATCTCTGCTCCGCTTTTGCTAGTTTTTTGTTCCTATAGAAGATTAATATCCATATTTGTGGAATGCAGGGACTAGATTAGAGCTTTTGACATATTAGCGCTGTGATTGACTGAGAAAGCTATGCGCCTGAGACGTTTGGCCTCTGAAGTGTACACTTCACCTTGAATTTTGTGTTGCATCATCTTAGTTTTAGTTATCATCCCAAGTTCATTGTACTCTTAGTTTCTTACATTTTTGTATACTGAATTAATACAAAATTTTACTTCTTTCACTCCTTTATGTTGCCTGCTTTTGCGTAGAACTGAACAATTCTCATGTATACTTGCATACAGGCACAATAAGGTCATTAAGTTATTGATTGTGGAACAAATGAGTGTTTAGTCCCTAAGAAGTTGATGTCTACTACTACTTGGTACTTGATGTTTCA

mRNA sequence

AAGATTTGAGTTGCAAGATTATTGTTGATTAAGCTCAAATCTAATTTGCCATTTTGTTTGGGGTTAATTTCGATTCGGCTGCTTGATTTGATATGATCCGATCTTGCAAACCCTAGCATGAGGTAATCGAGTATCTTCGTGTTCATTCTCCGTCTCTTCTTCTGATTCATCGTTTATTTAATCTGTTTTTCGGTTAAGTTTCGGCCATTGAATCTCTTCCTTAGCTTCAGAAGCGGGGGGAAGAGGTTTTCTTTGGTTGGGAAGAATTGTGGAACCGTGTGTAATTGGATCTTGACGGAAGAGTAGTCTAGATTTTTGTTGATTCAGTTCCAGGAAGATTCGGGCTGAGCTGTGGAAGGGTGTAAATCAGGGGGTTTTCTGTGTTTCTCTGTTCTCTCTAGCTTTGGGGAATTATACTTATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCGCCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCTACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTTGGGCCATCTCATCCCTATGCGAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTAGGCTTTGTTGAGGATGCGTCCATTGAGCCGTTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCGACTGGGAAAATTCCTTACGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGACAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGACGGACGCTTTGTTATGTCTGGCGACGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGGACTAGATTAGAGCTTTTGACATATTAGCGCTGTGATTGACTGAGAAAGCTATGCGCCTGAGACGTTTGGCCTCTGAAGTGTACACTTCACCTTGAATTTTGTGTTGCATCATCTTAGTTTTAGTTATCATCCCAAGTTCATTGTACTCTTAGTTTCTTACATTTTTGTATACTGAATTAATACAAAATTTTACTTCTTTCACTCCTTTATGTTGCCTGCTTTTGCGTAGAACTGAACAATTCTCATGTATACTTGCATACAGGCACAATAAGGTCATTAAGTTATTGATTGTGGAACAAATGAGTGTTTAGTCCCTAAGAAGTTGATGTCTACTACTACTTGGTACTTGATGTTTCA

Coding sequence (CDS)

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCGCCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCTACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTTGGGCCATCTCATCCCTATGCGAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTAGGCTTTGTTGAGGATGCGTCCATTGAGCCGTTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCGACTGGGAAAATTCCTTACGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGACAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGACGGACGCTTTGTTATGTCTGGCGACGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGGACTAG
Homology
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BLAST of CmoCh18G008050 vs. Swiss-Prot
Match: PRP17_MOUSE (Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 541.6 bits (1394), Expect = 1.1e-152
Identity = 271/534 (50.75%), Postives = 358/534 (67.04%), Query Frame = 1 

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP  GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSAS---AGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESE 180
           TF  YGYA DPS         +IG +E  +KN  ++V+     E  ++K EK+K+  E  
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKE-- 191

Query: 181 DVEMELNPAEVDNPASDVWLMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGE 240
                       N AS++        PW+    ++ +     EEQK+  E  AK  KKG+
Sbjct: 192 ------------NDASNI---DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK 251

Query: 241 EKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWS 300
           ++  + GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WS
Sbjct: 252 QEEEKPGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWS 311

Query: 301 GHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGS 360
           GHTKGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G+
Sbjct: 312 GHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGT 371

Query: 361 KFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 420
           +FL+A YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+
Sbjct: 372 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 431

Query: 421 NTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMP 480
            +G+I QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP
Sbjct: 432 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP 491

Query: 481 SISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 540
           ++++ PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+S
Sbjct: 492 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVIS 551

Query: 541 GDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           GDG GK   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 552 GDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of CmoCh18G008050 vs. Swiss-Prot
Match: PRP17_HUMAN (Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1)

HSP 1 Score: 541.2 bits (1393), Expect = 1.4e-152
Identity = 284/575 (49.39%), Postives = 373/575 (64.87%), Query Frame = 1 

Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V        V     T    +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV-------AVKEDLET-GVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSAS---AG 139
           P  GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDNPASDVW 199
             +IG +E  +KN  ++V+     E  ++K EK+K+  E              N AS++ 
Sbjct: 160 AKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKE--------------NDASNI- 219

Query: 200 LMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGEKGEVTADKSTFHGK 259
                  PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H K
Sbjct: 220 --DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVK 279

Query: 260 EERDYQGRSWIAPPKDAKAT------NDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLI 319
           E  DYQGRS++  P+D           + CY+PK+ +H WSGHTKGVSA+R FP  GHL+
Sbjct: 280 EMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLL 339

Query: 320 LSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETG 379
           LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETG
Sbjct: 340 LSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETG 399

Query: 380 QVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTI 439
           Q IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI
Sbjct: 400 QCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTI 459

Query: 440 TFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQ 499
            FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQ
Sbjct: 460 VFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQ 519

Query: 500 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFR 559
           ILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++ 
Sbjct: 520 ILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS 579

Query: 560 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
             K H+ VCIG  WHP E SKV TCGWDGLIK WD
Sbjct: 580 RFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of CmoCh18G008050 vs. Swiss-Prot
Match: PRP17_SCHPO (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prp17 PE=1 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 5.6e-101
Identity = 215/592 (36.32%), Postives = 314/592 (53.04%), Query Frame = 1 

Query: 14  DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTM---LALTVANAYRTLSKPIDPTQHLVAF 73
           D   ++ + SP   P  LL ++  AP V D +   L ++     R L++           
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVDNVKDDLIVSKGGNSRELAR----------- 68

Query: 74  NPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY--NTFHKYGYA 133
           N   +++  P LGP++P+        ++N   G+ E   +  FVF+++Y  NT   YG  
Sbjct: 69  NVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQEYYANTHAIYGKR 128

Query: 134 A--DPSASAGNNFIGDMEALQKN----------DAISVYNIPQHEQKKRKIEKKKEMSES 193
              D  A+   +     + +++           +    Y  P       +     E SE 
Sbjct: 129 NFDDNEATTSTDLKRKSQKIKERREDPGDPSILEGDGAYKGPWAGYGSEQSSSPLEYSEY 188

Query: 194 EDVEMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKG 253
           E+VE     +E D  ++++                 Q EL +EQ    E    +  EE  
Sbjct: 189 EEVESLDVKSEKDTESNNLG----------------QNELLKEQLATPEVETHRSKEE-- 248

Query: 254 GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHT 313
                     +  H     DYQ RS++  P D       +     CYIPK+ + TW GHT
Sbjct: 249 ----------TILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKGHT 308

Query: 314 KGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFL 373
           KG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG  FL
Sbjct: 309 KGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFL 368

Query: 374 TAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTG 433
           +  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D+ + 
Sbjct: 369 STSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSP 428

Query: 434 QITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSIS 493
            I Q YD HLG +N+ITF++N +RFVT+SDD S+R WEYG PV IK++++  MHSMP ++
Sbjct: 429 DIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVA 488

Query: 494 VHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 553
           + PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV SGD 
Sbjct: 489 LRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSGDS 548

Query: 554 EGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYWD 582
            G   FWDWKTCK+   L  H G      +HP E SKVAT    DG IKYWD
Sbjct: 549 SGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYWD 558

[Close]
BLAST of CmoCh18G008050 vs. Swiss-Prot
Match: PRP17_YEAST (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC40 PE=1 SV=2)

HSP 1 Score: 273.9 bits (699), Expect = 4.1e-72
Identity = 146/462 (31.60%), Postives = 247/462 (53.46%), Query Frame = 1 

Query: 130 DPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVD 189
           D S+ +  NF       +K +  +++    +E     I K+K      +++      + D
Sbjct: 8   DTSSDSDLNFDEGKSVHEKKNG-NLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGD 67

Query: 190 NPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTF 249
            P    W        WS   +   ++ +E QK+  + +     E+    +     + S F
Sbjct: 68  GP----W------GSWSSSDDET-SQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHF 127

Query: 250 HGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHG 309
           +GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK G
Sbjct: 128 YGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTG 187

Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDT 369
           HLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++ +D+ +K WDT
Sbjct: 188 HLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDT 247

Query: 370 ETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHL 429
           ETG+V +       P  V+  P +  +   + G+S+ KI+ +D    +   + Q YD HL
Sbjct: 248 ETGKVKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHL 307

Query: 430 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 489
            ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  A
Sbjct: 308 SSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCA 367

Query: 490 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 549
           QS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW 
Sbjct: 368 QSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWN 427

Query: 550 TCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLIKYWD 582
           T ++   +K      I   +WHP E SKV   G  G I   D
Sbjct: 428 TSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKIYVCD 455

[Close]
BLAST of CmoCh18G008050 vs. Swiss-Prot
Match: WDR25_MOUSE (WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.8e-44
Identity = 94/313 (30.03%), Postives = 165/313 (52.72%), Query Frame = 1 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKH--GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           ++     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]
BLAST of CmoCh18G008050 vs. TrEMBL
Match: E5GBJ7_CUCME (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1194.9 bits (3090), Expect = 0.0e+00
Identity = 570/581 (98.11%), Postives = 578/581 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANA +TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CmoCh18G008050 vs. TrEMBL
Match: A0A0A0KQ97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 569/581 (97.93%), Postives = 578/581 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA +TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CmoCh18G008050 vs. TrEMBL
Match: A0A061GY62_THECC (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_039496 PE=4 SV=1)

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 520/588 (88.44%), Postives = 551/588 (93.71%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQ-LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSK 60
           MDLLQ+Y D +D D   +Q  TSSP++SPPRL+PSK++APKVDDTMLALT A  ++  SK
Sbjct: 44  MDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTAAKTHQAHSK 103

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDPTQH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDASIE FVFDEQY
Sbjct: 104 PIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIESFVFDEQY 163

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQKNDAISVYNIPQHEQKKRKIEK+KEM   ED 
Sbjct: 164 NTFHKYGYAADPS---GNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEMEVEEDE 223

Query: 181 ----EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEK 240
               E E++P E+DNPASDVWLMKN+ SPW+GKKEG+QTELTEEQKKYAEEYAKKK EEK
Sbjct: 224 VVGGEGEVDPTEIDNPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAKKK-EEK 283

Query: 241 G--GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 300
           G  GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV
Sbjct: 284 GHPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 343

Query: 301 SAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAG 360
           SAIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAG
Sbjct: 344 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAG 403

Query: 361 YDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQIT 420
           YDK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQIT
Sbjct: 404 YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQIT 463

Query: 421 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHP 480
           QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HP
Sbjct: 464 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 523

Query: 481 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 540
           NTNWLAAQSLDNQILIYSTR RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK
Sbjct: 524 NTNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 583

Query: 541 CWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           CWFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 584 CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 627

[Close]
BLAST of CmoCh18G008050 vs. TrEMBL
Match: A0A0D2M0T1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G197400 PE=4 SV=1)

HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00
Identity = 515/587 (87.73%), Postives = 557/587 (94.89%), Query Frame = 1 

Query: 1   MDLLQSYTDQND-DDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSK 60
           MDLLQ+Y D++D +D S +  TSSP++SPPRL+PSK++APKVDDTMLALTVA A+++ SK
Sbjct: 1   MDLLQTYADKSDGEDQSHQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTVAKAHQSHSK 60

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDP+QH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDA+IE FVFDEQY
Sbjct: 61  PIDPSQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDAAIESFVFDEQY 120

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQ+NDAISVYNIPQHEQKKRKIEK K++   ++V
Sbjct: 121 NTFHKYGYAADPS---GNNYIGDLDALQENDAISVYNIPQHEQKKRKIEKMKDVEMEDEV 180

Query: 181 ---EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKG 240
              E E++P E+DNPASDVWLMKN+KSPW+GK+EG+QTELTEEQKKYAEEYAKKK EEKG
Sbjct: 181 VGGEHEVDPTEIDNPASDVWLMKNKKSPWAGKREGVQTELTEEQKKYAEEYAKKK-EEKG 240

Query: 241 --GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVS 300
             GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRL+HTWSGHTKGVS
Sbjct: 241 HSGEKGEHLVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLIHTWSGHTKGVS 300

Query: 301 AIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGY 360
           AIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDGSKFLTAGY
Sbjct: 301 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGY 360

Query: 361 DKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQ 420
           DK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQ TQ
Sbjct: 361 DKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQTTQ 420

Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPN 480
           EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMP+IS+HPN
Sbjct: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPN 480

Query: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 540
           TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
Sbjct: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 540

Query: 541 WFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           WFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 583

[Close]
BLAST of CmoCh18G008050 vs. TrEMBL
Match: A0A0D2QSZ1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G197400 PE=4 SV=1)

HSP 1 Score: 1079.7 bits (2791), Expect = 0.0e+00
Identity = 515/587 (87.73%), Postives = 557/587 (94.89%), Query Frame = 1 

Query: 1   MDLLQSYTDQND-DDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSK 60
           MDLLQ+Y D++D +D S +  TSSP++SPPRL+PSK++APKVDDTMLALTVA A+++ SK
Sbjct: 69  MDLLQTYADKSDGEDQSHQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTVAKAHQSHSK 128

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDP+QH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDA+IE FVFDEQY
Sbjct: 129 PIDPSQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDAAIESFVFDEQY 188

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQ+NDAISVYNIPQHEQKKRKIEK K++   ++V
Sbjct: 189 NTFHKYGYAADPS---GNNYIGDLDALQENDAISVYNIPQHEQKKRKIEKMKDVEMEDEV 248

Query: 181 ---EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKG 240
              E E++P E+DNPASDVWLMKN+KSPW+GK+EG+QTELTEEQKKYAEEYAKKK EEKG
Sbjct: 249 VGGEHEVDPTEIDNPASDVWLMKNKKSPWAGKREGVQTELTEEQKKYAEEYAKKK-EEKG 308

Query: 241 --GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVS 300
             GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRL+HTWSGHTKGVS
Sbjct: 309 HSGEKGEHLVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLIHTWSGHTKGVS 368

Query: 301 AIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGY 360
           AIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDGSKFLTAGY
Sbjct: 369 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGY 428

Query: 361 DKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQ 420
           DK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQ TQ
Sbjct: 429 DKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQTTQ 488

Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPN 480
           EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMP+IS+HPN
Sbjct: 489 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPN 548

Query: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 540
           TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
Sbjct: 549 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 608

Query: 541 WFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           WFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 609 WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 651

[Close]
BLAST of CmoCh18G008050 vs. TAIR10
Match: AT1G10580.1 (AT1G10580.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 988.0 bits (2553), Expect = 2.4e-288
Identity = 473/583 (81.13%), Postives = 522/583 (89.54%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDL+QSY ++++       + SSPE+SPPR+L +K+SAP+VDDT LALTVAN  ++ SKP
Sbjct: 1   MDLIQSYEEEDE------AVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP+ GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHK GYAADPS   G N++GD+EA +KND +SV+NIPQ EQK+RKIE+ KE  E E+ +
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGE--EKGGE 240
            E+ P E +NP ++ WL KNRKSPWS KKE +Q ELTEEQKKYAE++AKKK E  ++G  
Sbjct: 181 EEIEP-EAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGET 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTAGYDK I
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NTG++TQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           WK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573

[Close]
BLAST of CmoCh18G008050 vs. TAIR10
Match: AT5G54520.1 (AT5G54520.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 207.2 bits (526), Expect = 2.7e-53
Identity = 102/312 (32.69%), Postives = 169/312 (54.17%), Query Frame = 1 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 397
           V+D+ +   G   L+ GYD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 398 MSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEY 457
            S   +  WD+   +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

Query: 578 TCGWDGLIKYWD 582
            C W+G +  ++
Sbjct: 448 ACSWNGQVSVFE 457

[Close]
BLAST of CmoCh18G008050 vs. TAIR10
Match: AT2G43770.1 (AT2G43770.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 8.1e-26
Identity = 74/291 (25.43%), Postives = 127/291 (43.64%), Query Frame = 1 

Query: 287 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 346
           SGH   V  ++F P  G LI S   D ++ +W V    K      GH  A+ D+ + +DG
Sbjct: 50  SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 109

Query: 347 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 406
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 110 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 169

Query: 407 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSM 466
           M      Q +      +  ++F D   +  T   D  ++VW+         + E H  ++
Sbjct: 170 MRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTI 229

Query: 467 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 526
             +S+ P+ ++L    +DN++ ++  R     N+  K F G  H       + ++SPDG 
Sbjct: 230 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 289

Query: 527 FVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 575
            V +G  +     WD  + +    L  H G    C +HP E   + +C  D
Sbjct: 290 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335

[Close]
BLAST of CmoCh18G008050 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-25
Identity = 61/218 (27.98%), Postives = 115/218 (52.75%), Query Frame = 1 

Query: 282 LVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDIS 341
           L+ T  GHT     + F P+  ++I+S   D  V+IWDV  +GKC++    HS  V  + 
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDV-TTGKCLKVLPAHSDPVTAVD 164

Query: 342 FCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 401
           F  DGS  +++ YD   + WD+ TG  + T    + P V  V+ +P+      +L G  D
Sbjct: 165 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG---KFILVGTLD 224

Query: 402 KKIVQWDMNTGQITQEYDQHLGA---VNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIK 461
             +  W++++ +  + Y  H+ A   +++   V N +R V+ S+D  + +WE     +++
Sbjct: 225 NTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ 284

Query: 462 YISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRE 495
            + E H  ++ +++ HP  N +A+ SLD  + I++ ++
Sbjct: 285 KL-EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316

[Close]
BLAST of CmoCh18G008050 vs. TAIR10
Match: AT5G08390.1 (AT5G08390.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-14
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 280 KRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRD 339
           K  +HT+ GHT+GV+ +RF P  G  I+S G D  VK+WD+  +GK +  +  H   ++ 
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQS 192

Query: 340 ISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSD 399
           + F        T   DK +K+WD ET ++I +  T +   V  L  + D +++L      
Sbjct: 193 LDFHPHEFLLATGSADKTVKFWDLETFELIGSGGT-ETTGVRCLTFNPDGKSVLCGLQES 252

Query: 400 KKIVQWD 407
            KI  W+
Sbjct: 253 LKIFSWE 256

[Close]
BLAST of CmoCh18G008050 vs. NCBI nr
Match: gi|659090804|ref|XP_008446211.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo])

HSP 1 Score: 1194.9 bits (3090), Expect = 0.0e+00
Identity = 570/581 (98.11%), Postives = 578/581 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANA +TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CmoCh18G008050 vs. NCBI nr
Match: gi|778705063|ref|XP_011655627.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus])

HSP 1 Score: 1193.3 bits (3086), Expect = 0.0e+00
Identity = 569/581 (97.93%), Postives = 578/581 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA +TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of CmoCh18G008050 vs. NCBI nr
Match: gi|659090806|ref|XP_008446212.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo])

HSP 1 Score: 1192.6 bits (3084), Expect = 0.0e+00
Identity = 569/580 (98.10%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANA +TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh18G008050 vs. NCBI nr
Match: gi|449434919|ref|XP_004135243.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus])

HSP 1 Score: 1191.0 bits (3080), Expect = 0.0e+00
Identity = 568/580 (97.93%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA +TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh18G008050 vs. NCBI nr
Match: gi|590581776|ref|XP_007014440.1| (Transducin/WD40 repeat-like superfamily protein [Theobroma cacao])

HSP 1 Score: 1083.6 bits (2801), Expect = 0.0e+00
Identity = 520/588 (88.44%), Postives = 551/588 (93.71%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQ-LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSK 60
           MDLLQ+Y D +D D   +Q  TSSP++SPPRL+PSK++APKVDDTMLALT A  ++  SK
Sbjct: 44  MDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTAAKTHQAHSK 103

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDPTQH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDASIE FVFDEQY
Sbjct: 104 PIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIESFVFDEQY 163

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQKNDAISVYNIPQHEQKKRKIEK+KEM   ED 
Sbjct: 164 NTFHKYGYAADPS---GNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEMEVEEDE 223

Query: 181 ----EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEK 240
               E E++P E+DNPASDVWLMKN+ SPW+GKKEG+QTELTEEQKKYAEEYAKKK EEK
Sbjct: 224 VVGGEGEVDPTEIDNPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAKKK-EEK 283

Query: 241 G--GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 300
           G  GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV
Sbjct: 284 GHPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 343

Query: 301 SAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAG 360
           SAIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAG
Sbjct: 344 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAG 403

Query: 361 YDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQIT 420
           YDK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQIT
Sbjct: 404 YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQIT 463

Query: 421 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHP 480
           QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HP
Sbjct: 464 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 523

Query: 481 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 540
           NTNWLAAQSLDNQILIYSTR RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK
Sbjct: 524 NTNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 583

Query: 541 CWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 582
           CWFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD
Sbjct: 584 CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 627

The following BLAST results are available for this feature:
BLAST of CmoCh18G008050 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRP17_MOUSE1.1e-15250.75Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=2 SV=1[more]
PRP17_HUMAN1.4e-15249.39Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1[more]
PRP17_SCHPO5.6e-10136.32Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
PRP17_YEAST4.1e-7231.60Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
WDR25_MOUSE4.8e-4430.03WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1[more]
BLAST of CmoCh18G008050 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBJ7_CUCME0.0e+0098.11Pre-mRNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KQ97_CUCSA0.0e+0097.93Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601580 PE=4 SV=1[more]
A0A061GY62_THECC0.0e+0088.44Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_039496... [more]
A0A0D2M0T1_GOSRA0.0e+0087.73Uncharacterized protein OS=Gossypium raimondii GN=B456_001G197400 PE=4 SV=1[more]
A0A0D2QSZ1_GOSRA0.0e+0087.73Uncharacterized protein OS=Gossypium raimondii GN=B456_001G197400 PE=4 SV=1[more]
BLAST of CmoCh18G008050 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10580.12.4e-28881.13 Transducin/WD40 repeat-like superfamily protein[more]
AT5G54520.12.7e-5332.69 Transducin/WD40 repeat-like superfamily protein[more]
AT2G43770.18.1e-2625.43 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.11.4e-2527.98 Transducin/WD40 repeat-like superfamily protein[more]
AT5G08390.11.1e-1432.28 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of CmoCh18G008050 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090804|ref|XP_008446211.1|0.0e+0098.11PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo][more]
gi|778705063|ref|XP_011655627.1|0.0e+0097.93PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus][more]
gi|659090806|ref|XP_008446212.1|0.0e+0098.10PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo][more]
gi|449434919|ref|XP_004135243.1|0.0e+0097.93PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus][more]
gi|590581776|ref|XP_007014440.1|0.0e+0088.44Transducin/WD40 repeat-like superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0071013catalytic step 2 spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0005515 protein binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh18G008050.1CmoCh18G008050.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 324..362
score: 6.5E-6coord: 544..581
score: 0.096coord: 281..319
score: 5.5E-6coord: 410..447
score: 0.001coord: 503..538
score: 0
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 279..319
score: 6.9E-9coord: 452..491
score: 10.0coord: 409..448
score: 2.6E-6coord: 497..538
score: 0.14coord: 365..406
score: 3.6coord: 323..362
score: 4.4E-10coord: 541..581
score: 3.
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 286..320
score: 12.881coord: 330..371
score: 15.421coord: 416..448
score: 12.614coord: 548..581
score:
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 274..581
score: 2.8E-74coord: 150..173
score: 2.8
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 286..581
score: 45
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 277..581
score: 5.29
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 306..320
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 306..320
score: 5.6E-5coord: 349..363
score: 5.6E-5coord: 435..449
score: 5.
NoneNo IPR availableunknownCoilCoilcoord: 157..177
score: -coord: 209..229
scor
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 55..581
score: 1.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh18G008050Cucsa.286030Cucumber (Gy14) v1cgycmoB0790
CmoCh18G008050CmaCh04G017290Cucurbita maxima (Rimu)cmacmoB710
CmoCh18G008050Cla010088Watermelon (97103) v1cmowmB367
CmoCh18G008050Csa5G601580Cucumber (Chinese Long) v2cmocuB402
CmoCh18G008050MELO3C011999Melon (DHL92) v3.5.1cmomeB347
CmoCh18G008050ClCG05G025310Watermelon (Charleston Gray)cmowcgB360
CmoCh18G008050CSPI05G22710Wild cucumber (PI 183967)cmocpiB407
CmoCh18G008050Lsi04G007010Bottle gourd (USVL1VR-Ls)cmolsiB366
CmoCh18G008050Lsi04G005460Bottle gourd (USVL1VR-Ls)cmolsiB368
CmoCh18G008050Cp4.1LG01g15330Cucurbita pepo (Zucchini)cmocpeB396
CmoCh18G008050Cp4.1LG09g05060Cucurbita pepo (Zucchini)cmocpeB376
CmoCh18G008050MELO3C011851.2Melon (DHL92) v3.6.1cmomedB397
CmoCh18G008050MELO3C011999.2Melon (DHL92) v3.6.1cmomedB398
CmoCh18G008050CsaV3_5G030120Cucumber (Chinese Long) v3cmocucB0489
CmoCh18G008050CsaV3_5G031590Cucumber (Chinese Long) v3cmocucB0484
CmoCh18G008050Cla97C05G107460Watermelon (97103) v2cmowmbB406
CmoCh18G008050Bhi07G001379Wax gourdcmowgoB0539
CmoCh18G008050CsGy5G022230Cucumber (Gy14) v2cgybcmoB600
CmoCh18G008050Carg14466Silver-seed gourdcarcmoB0984
CmoCh18G008050Carg14344Silver-seed gourdcarcmoB0341
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh18G008050CmoCh04G018120Cucurbita moschata (Rifu)cmocmoB341
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh18G008050Melon (DHL92) v3.6.1cmomedB407
CmoCh18G008050Silver-seed gourdcarcmoB0857
CmoCh18G008050Cucurbita moschata (Rifu)cmocmoB137
CmoCh18G008050Cucurbita maxima (Rimu)cmacmoB180
CmoCh18G008050Cucurbita maxima (Rimu)cmacmoB406
CmoCh18G008050Wild cucumber (PI 183967)cmocpiB398