Carg14466 (gene) Silver-seed gourd

Overview
NameCarg14466
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPre-mRNA-processing factor 17
LocationCucurbita_argyrosperma_scaffold_041 : 524792 .. 528481 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCGCCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTTGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTAGGCTTTGTTGAGGATGCGTCCATTGAGCCGTTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTACGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGACAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTCGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAAGTAAATCCCTTTATTCTTATAAATGTTTAATGGAGGTTATGCTAATTCATCTTTCATCCTTCAGTATGTCATATTTCTTTTCAAGGGCTCTGCAGTATGATGGTCAAATGTTCATTAAATTTCGATTTCTCTGCTGCCTTTGGTGTTTTTTTTTAATTGAGATCTTCCTATTGGCCTAGCTTTTTAGCATTTGAAATGCAACTTTATCACCCGGTGGCCTCGTTATCCACACCTCTGGTAGGATGAATGGAGGACCGACCCGGGTTTTCATGAGGCACCAAAACAACTGACTTCAATATTTGAAGTCATTTTTCTGTTGTTTTGGGAACTAGCTTTAGTTGTCAAAGGACTTGATAGGAACTAAACTTTGGAGTTTGGGTATTATTTTCTGCTAGTGAATCCATTGTTTCACAGTTATTGTGGAATATCCATATTTTGGTAAAGATTTTCATGCCTTCTGTAATTGTCACGGCTAGGACCAAATGGTTTTTGCCTGTGGTAGCAACTGAAGTTTTGATTTGATAGAAAAGCCTAAGTAGTTTTATCAAAATTTTTTTGTTTTAATGCTCAACTGATTTGTATTTGTTATTCTACACCTCCTGCCTTTGTCATGTGATTCTTAGATTTTGTTATGCTGCTAAATTTTTAGATTCCTCGATGATAAAATTTGTTCTACCATTCATATTCTTGAACTTGTAACGTCCGGTAAGTATGGATCGTTTGAATGGTTTTCTTCCTCAAGTGAAGTAGCCATTAGTCATTCCTGTTCTTCTCCTACAATAAAATTTGTTCTACTATTCACCTCATCCGACTCTAGCTTTCAGCAAGTATGAATCATTCTGGATGATTTTCTTATTCATGAAAAAAAGGTAGCCGGTTTGCAACGGTTCAAGCCCACCCGCTAGCAGATGTTGTCCTCTTTGAGTTTTCCCTTTTGCCTTCAAAGTTTTTAAGATGCATATGCTAGGGAGAGGTTTCTACACCCTTATAAAGGGTGTTCCGTTCTCCTCCCGACCGACGTGGGATCTCATGGCTATTACTATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGCGTATGCTAGGAGGAGGTTTCAACACCCTTATAAAGGGTGTTTCGTTCTCCTCCCCAACCGACGTGGGATCTCATGGTTATTACCATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACGCGTATGCTAGGAAGAGGTTTCCACACCCTTATAAAGAGTGTTTCGTTCTCCTCCCCAACCAACATGGGATCTCATAGTTATTACCATTTTTCGAGCTTCCCTTCAAGGTTTTTAAAACACGTAATGCTAGGAAGAGGTTTTCACACCCTTATAAAGTGTGCTCCGTACTCCTCCCCAACCGATGTGGGATCTCATGACCCTTACTATTTTTCATATACTTGTCATATCACCTTGTAATTCATCTTTCTTTTACTGTTTGATTGGCACATGATTGAATGAGACATTGGGAATAGTTCATCATTGGCTTTTGCTAGTTTTTTGTTCCTATAGAAGATTAATATCCATATTTGTGGAATGCAGGGACTAGATTAGAGCTTTTGACATATTAGCGCTGTGATTGACTGAGAAAGCTATGCGCCTGAGACGTTTGGCCTCTGAAGTGTACACTTTACCTTGAATTTTGTGTTGCATCATCTTAGTTTTAGTTATCATCCCAAGTTCATTGTACTCTTAGTTTCTTACATTTTTGTATACTGAATTAATACAAAATTTTACTTCTTTCACTCCTTTATGTTGCCTGCTTTTGCGTAGAACTGAACAATTCTCATGTATACTTGCATACAGGCACAATAAGGTCATTAAGTTATTGATTGTGGAACAAATGAGTTTTTAGTCCCTAAGAAGTTGATGTCTACTACTACTTGGTACTTGATGTTTCATAAGAGATGCTCTAGGTTTGCAAAAGACTTCTAA

mRNA sequence

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCGCCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTTGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTAGGCTTTGTTGAGGATGCGTCCATTGAGCCGTTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTACGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGACAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTCGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAATTCCTCGATGATAAAATTTGTTCTACCATTCATATTCTTGAACTTGTAACGTCCGTCCCTAAGAAGTTGATGTCTACTACTACTTGGTACTTGATGTTTCATAAGAGATGCTCTAGGTTTGCAAAAGACTTCTAA

Coding sequence (CDS)

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGACGGAAGCCCTAAACAGCTTACATCTTCGCCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTTGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTAGGCTTTGTTGAGGATGCGTCCATTGAGCCGTTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAATACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACGAATGATCATTGTTATATACCAAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCAGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTACGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGACAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTCGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAATTCCTCGATGATAAAATTTGTTCTACCATTCATATTCTTGAACTTGTAACGTCCGTCCCTAAGAAGTTGATGTCTACTACTACTTGGTACTTGATGTTTCATAAGAGATGCTCTAGGTTTGCAAAAGACTTCTAA

Protein sequence

MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKPIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLDDKICSTIHILELVTSVPKKLMSTTTWYLMFHKRCSRFAKDF
Homology
[Close]
BLAST of Carg14466 vs. NCBI nr
Match: XP_023541872.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1059.3 bits (2738), Expect = 5.1e-306
Identity = 579/581 (99.66%), Postives = 580/581 (99.83%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Carg14466 vs. NCBI nr
Match: XP_022966828.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 1058.1 bits (2735), Expect = 1.1e-305
Identity = 578/581 (99.48%), Postives = 580/581 (99.83%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           M+LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Carg14466 vs. NCBI nr
Match: XP_023541873.1 (pre-mRNA-processing factor 17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1057.7 bits (2734), Expect = 1.5e-305
Identity = 578/579 (99.83%), Postives = 579/579 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKF 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]
BLAST of Carg14466 vs. NCBI nr
Match: XP_022966830.1 (pre-mRNA-processing factor 17-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 1056.6 bits (2731), Expect = 3.3e-305
Identity = 577/579 (99.65%), Postives = 579/579 (100.00%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           M+LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MDLNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKF 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]
BLAST of Carg14466 vs. NCBI nr
Match: XP_022945494.1 (pre-mRNA-processing factor 17-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 1056.2 bits (2730), Expect = 4.3e-305
Identity = 578/581 (99.48%), Postives = 579/581 (99.66%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANA RTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAYRTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE
Sbjct: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
           MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Carg14466 vs. TAIR10
Match: AT1G10580.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 802.4 bits (2071), Expect = 2.0e-232
Identity = 425/583 (72.90%), Postives = 461/583 (79.07%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDL+QSY ++++       + SSPE+SPPR+L +K+SAP+VDDT LALTVAN N++ SKP
Sbjct: 1   MDLIQSYEEEDE------AVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP+ GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHK GYAADPS   G N++GD+EA +KND +SV+NIPQ EQK+RKIE            
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIE-XXXXXXXXXXX 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
                                      KKE +Q E        XXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXKKEVVQGELTEEQKKYXXXXXXXXXXXXXXXXX 240

Query: 241 XXT--ADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           XX   ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 XXXXYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXX 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F ND    XXXXX    
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFXXXXXDKNI 360

Query: 361 XXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQ 420
                ETGQVISTFSTGKIPYVVKLNPDDDKQNILLA                   EYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           WK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYWD 573

[Close]
BLAST of Carg14466 vs. TAIR10
Match: AT5G54520.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 173.3 bits (438), Expect = 4.6e-43
Identity = 92/312 (29.49%), Postives = 152/312 (48.72%), Query Frame = 0 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDXXXXXXXXXXXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAX 397
           V+D+ +                     E G    +F   ++  VVK +PD+   N+ L+ 
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDN--CNVFLSG 267

Query: 398 XXXXXXXXXXXXXXXXXXEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEY 457
                             EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

Query: 578 TCGWDGLIKFLD 582
            C W+G +   +
Sbjct: 448 ACSWNGQVSVFE 457

[Close]
BLAST of Carg14466 vs. TAIR10
Match: AT4G32551.2 (LisH dimerisation motif;WD40/YVTN repeat-like-containing domain)

HSP 1 Score: 49.3 bits (116), Expect = 1.0e-05
Identity = 23/58 (39.66%), Postives = 31/58 (53.45%), Query Frame = 0 

Query: 285 TWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISF 343
           T   HT  ++ IRF P    L  S+  D  V++WD  N G  +RT+MGHS  V  + F
Sbjct: 726 TLEEHTAMITDIRFSPSQLRLATSS-FDKTVRVWDADNKGYSLRTFMGHSSMVTSLDF 782

[Close]
BLAST of Carg14466 vs. TAIR10
Match: AT2G16405.1 (Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 44.3 bits (103), Expect = 3.2e-04
Identity = 31/115 (26.96%), Postives = 55/115 (47.83%), Query Frame = 0 

Query: 419 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHP-NTNW 478
           H   V    F  NN+   +SS DK++RVWE    V I+ I    +     I  HP N N+
Sbjct: 215 HSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRGVCIRVIY--GISPQYCIRFHPVNNNF 274

Query: 479 LAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEG 533
           L+A + + ++ +++     ++ KK  F   + +     ++    G+ +  GDG+G
Sbjct: 275 LSAGNANKELTVFNF-STGRIIKKLLFEDEVTS-----MDHDHTGQIIFCGDGQG 321

[Close]
BLAST of Carg14466 vs. Swiss-Prot
Match: sp|O60508|PRP17_HUMAN (Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.5e-128
Identity = 249/581 (42.86%), Postives = 327/581 (56.28%), Query Frame = 0 

Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSA---SAG 139
           P  GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESE----------DVEMELNPA 199
             +IG +E  +KN  ++V+   Q + +KRK  K+ + S  +          D +    P+
Sbjct: 160 AKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNIDGFLGPWAKYVDEKDVAKPS 219

Query: 200 EVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXXXXTADK 259
           E +    D    K +K    GK+E                                  +K
Sbjct: 220 EEEQKELDEITAKRQK---KGKQE----------------------------EEKPGEEK 279

Query: 260 STFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 319
           +  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WSGHTKGVSA+R FP
Sbjct: 280 TILHVKEMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFP 339

Query: 320 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 379
             GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F                  
Sbjct: 340 LSGHLLLSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKL 399

Query: 380 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 439
              ETGQ IS F+  K+PY VK NPD+DKQN+ +A                   EYD+HL
Sbjct: 400 WDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHL 459

Query: 440 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 499
           GAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA 
Sbjct: 460 GAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLAC 519

Query: 500 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 559
           QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWK
Sbjct: 520 QSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWK 579

Query: 560 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           T K++   K H+ VCIG  WHP E SKV TCGWDGLIK  D
Sbjct: 580 TTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of Carg14466 vs. Swiss-Prot
Match: sp|Q9DC48|PRP17_MOUSE (Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 461.5 bits (1186), Expect = 1.5e-128
Identity = 238/540 (44.07%), Postives = 312/540 (57.78%), Query Frame = 0 

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP  GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSA---SAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESE 180
           TF  YGYA DPS         +IG +E  +KN  ++V+   Q + +KRK  K+ + S  +
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVFETGQKKTEKRKKFKENDASNID 191

Query: 181 ----------DVEMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXX 240
                     D +    P+E +    D    K +K    GK+E                 
Sbjct: 192 GFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQK---KGKQE----------------- 251

Query: 241 XXXXXXXXXXXXXXXTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKR 300
                            +K+  H KE  DYQGRS++  P+D      +    + CY+PK+
Sbjct: 252 -----------EEKPGEEKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKK 311

Query: 301 LVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDIS 360
            +H WSGHTKGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI 
Sbjct: 312 QIHVWSGHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDIC 371

Query: 361 FCNDXXXXXXXXXXXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXX 420
           F                     ETGQ IS F+  K+PY VK NPD+DKQN+ +A      
Sbjct: 372 FNTAGTQFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKK 431

Query: 421 XXXXXXXXXXXXXEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEP 480
                        EYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP
Sbjct: 432 IVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEP 491

Query: 481 HMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPD 540
            MHSMP++++ PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD
Sbjct: 492 SMHSMPAVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPD 551

Query: 541 GRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
             +V+SGDG GK   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK  D
Sbjct: 552 MSYVISGDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLWD 579

[Close]
BLAST of Carg14466 vs. Swiss-Prot
Match: sp|O43071|PRP17_SCHPO (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=prp17 PE=1 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.1e-83
Identity = 201/609 (33.00%), Postives = 287/609 (47.13%), Query Frame = 0 

Query: 14  DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTM---LALTVANANRTLSKPIDPTQHLVAF 73
           D   ++ + SP   P  LL ++  AP V D +   L ++    +R L++           
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVDNVKDDLIVSKGGNSRELAR----------- 68

Query: 74  NPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAAD 133
           N   +++  P LGP++P+        ++N   G+ E   +  FVF+++        Y A+
Sbjct: 69  NVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQE--------YYAN 128

Query: 134 PSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE--------------- 193
             A  G     D EA    D             KRK +K KE  E               
Sbjct: 129 THAIYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPGDPSILEGDGAYK 188

Query: 194 -------SEDVEMELNPAEVDNPAS-DVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXX 253
                  SE     L  +E +   S DV   K+ +S   G+ E L+ +            
Sbjct: 189 GPWAGYGSEQSSSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKEQ------------ 248

Query: 254 XXXXXXXXXXXXXXXTADKSTFHGKEER--------DYQGRSWIAPPKDA------KATN 313
                          T +  T   KEE         DYQ RS++  P D       +   
Sbjct: 249 -------------LATPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGE 308

Query: 314 DHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGH 373
             CYIPK+ + TW GHTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH
Sbjct: 309 QTCYIPKKHIFTWKGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGH 368

Query: 374 SQAVRDISFCNDXXXXXXXXXXXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNIL 433
           ++ +RD+SF  D                  E G+ ++ F++ ++   VK   D DK N  
Sbjct: 369 ARPIRDLSFSQDGRSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEF 428

Query: 434 LAXXXXXXXXXXXXXXXXXXXEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPV 493
           LA                    YD HLG +N+ITF++N +RFVT+SDD S+R WEYG PV
Sbjct: 429 LAGTADKRILQFDIRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPV 488

Query: 494 VIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYA 553
            IK++++  MHSMP +++ PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+
Sbjct: 489 PIKFVADIAMHSMPRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYS 548

Query: 554 CQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG- 582
            +V FSPDGRFV SGD  G   FWDWKTCK+   L  H G      +HP E SKVAT   
Sbjct: 549 LEVGFSPDGRFVFSGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSI 558

[Close]
BLAST of Carg14466 vs. Swiss-Prot
Match: sp|P40968|PRP17_YEAST (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=CDC40 PE=1 SV=2)

HSP 1 Score: 243.4 bits (620), Expect = 6.5e-63
Identity = 117/343 (34.11%), Postives = 185/343 (53.94%), Query Frame = 0 

Query: 247 STFHGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 306
           S F+GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F P
Sbjct: 113 SHFYGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLP 172

Query: 307 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 366
           K GHLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D               
Sbjct: 173 KTGHLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKI 232

Query: 367 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNIL-LAXXXXXXXXXXXXXXXXXXXEYDQH 426
              ETG+V +       P  V+  P +  + I+ L+                    YD H
Sbjct: 233 WDTETGKVKTRLHLNSTPADVESRPTNPHEFIVGLSNSKILHYDDRVSENQGLVQTYDHH 292

Query: 427 LGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLA 486
           L ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  
Sbjct: 293 LSSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFC 352

Query: 487 AQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDW 546
           AQS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW
Sbjct: 353 AQSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDW 412

Query: 547 KTCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLIKFLD 582
            T ++   +K      I   +WHP E SKV   G  G I   D
Sbjct: 413 NTSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKIYVCD 455

[Close]
BLAST of Carg14466 vs. Swiss-Prot
Match: sp|E9Q349|WDR25_MOUSE (WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 6.6e-31
Identity = 81/311 (26.05%), Postives = 144/311 (46.30%), Query Frame = 0 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPK--HGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDXXXXXXXXXXXXXXXXXXETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +                     ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AXXXXXXXXXXXXXXXXXXXEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
                                Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           ++     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIK 579
           + TC W G IK
Sbjct: 525 LGTCSWGGDIK 532

[Close]
BLAST of Carg14466 vs. TrEMBL
Match: tr|A0A1S3BFC4|A0A1S3BFC4_CUCME (pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 992.3 bits (2564), Expect = 5.0e-286
Identity = 548/581 (94.32%), Postives = 554/581 (95.35%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKI             
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
                       SDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Carg14466 vs. TrEMBL
Match: tr|E5GBJ7|E5GBJ7_CUCME (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 992.3 bits (2564), Expect = 5.0e-286
Identity = 548/581 (94.32%), Postives = 554/581 (95.35%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKI             
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
                       SDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Carg14466 vs. TrEMBL
Match: tr|A0A1S3BE12|A0A1S3BE12_CUCME (pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012 PE=4 SV=1)

HSP 1 Score: 990.7 bits (2560), Expect = 1.5e-285
Identity = 547/579 (94.47%), Postives = 553/579 (95.51%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKI             
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
                       SDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKF 580
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKY 579

[Close]
BLAST of Carg14466 vs. TrEMBL
Match: tr|A0A0A0KQ97|A0A0A0KQ97_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 990.7 bits (2560), Expect = 1.5e-285
Identity = 547/581 (94.15%), Postives = 554/581 (95.35%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKI             
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIXXXXXXXXXXXXX 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240
                       SDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXSDVWLMKNRKSPWSGKKEGLQTEXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           XXT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 XXTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXXXXXXXX 360

Query: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420
           XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL
Sbjct: 361 XXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXXEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 581

[Close]
BLAST of Carg14466 vs. TrEMBL
Match: tr|A0A061GY62|A0A061GY62_THECC (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_039496 PE=4 SV=1)

HSP 1 Score: 944.1 bits (2439), Expect = 1.6e-271
Identity = 473/587 (80.58%), Postives = 503/587 (85.69%), Query Frame = 0 

Query: 1   MDLLQSYTDQNDDDGSPKQ-LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSK 60
           MDLLQ+Y D +D D   +Q  TSSP++SPPRL+PSK++APKVDDTMLALT A  ++  SK
Sbjct: 44  MDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTAAKTHQAHSK 103

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDPTQH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDASIE FVFDEQY
Sbjct: 104 PIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIESFVFDEQY 163

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQKNDAISVYNIPQHEQKKRKIEK+KEM   ED 
Sbjct: 164 NTFHKYGYAADPS---GNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEMEVEEDE 223

Query: 181 ----EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTE-XXXXXXXXXXXXXXXXXXX 240
               E E++P E+DNPASDVWLMKN+ SPW+GKKEG+QTE                    
Sbjct: 224 VVGGEGEVDPTEIDNPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAKKKEEKG 283

Query: 241 XXXXXXXXTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVS 300
                     DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVS
Sbjct: 284 HPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVS 343

Query: 301 AIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDXXXXXXXXX 360
           AIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCND         
Sbjct: 344 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGY 403

Query: 361 XXXXXXXXXETGQVISTFSTGKIPYVVKLNPDDDKQNILLAXXXXXXXXXXXXXXXXXXX 420
                    ETGQVISTFSTGKIPYVVKLNPD+DKQNILLA   XXXXXXXXXXXXXX  
Sbjct: 404 DKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSXXXXXXXXXXXXXXTQ 463

Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPN 480
           EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HPN
Sbjct: 464 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHPN 523

Query: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 540
           TNWLAAQSLDNQILIYSTR RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
Sbjct: 524 TNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 583

Query: 541 WFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKFLD 582
           WFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIK+ D
Sbjct: 584 WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYWD 627

The following BLAST results are available for this feature:
BLAST of Carg14466 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023541872.15.1e-30699.66pre-mRNA-processing factor 17-like isoform X1 [Cucurbita pepo subsp. pepo][more]
XP_022966828.11.1e-30599.48pre-mRNA-processing factor 17-like isoform X1 [Cucurbita maxima][more]
XP_023541873.11.5e-30599.83pre-mRNA-processing factor 17-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022966830.13.3e-30599.65pre-mRNA-processing factor 17-like isoform X2 [Cucurbita maxima][more]
XP_022945494.14.3e-30599.48pre-mRNA-processing factor 17-like isoform X1 [Cucurbita moschata][more]
BLAST of Carg14466 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10580.12.0e-23272.90Transducin/WD40 repeat-like superfamily protein[more]
AT5G54520.14.6e-4329.49Transducin/WD40 repeat-like superfamily protein[more]
AT4G32551.21.0e-0539.66LisH dimerisation motif;WD40/YVTN repeat-like-containing domain[more]
AT2G16405.13.2e-0426.96Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Carg14466 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O60508|PRP17_HUMAN1.5e-12842.86Pre-mRNA-processing factor 17 OS=Homo sapiens OX=9606 GN=CDC40 PE=1 SV=1[more]
sp|Q9DC48|PRP17_MOUSE1.5e-12844.07Pre-mRNA-processing factor 17 OS=Mus musculus OX=10090 GN=Cdc40 PE=2 SV=1[more]
sp|O43071|PRP17_SCHPO1.1e-8333.00Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
sp|P40968|PRP17_YEAST6.5e-6334.11Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
sp|E9Q349|WDR25_MOUSE6.6e-3126.05WD repeat-containing protein 25 OS=Mus musculus OX=10090 GN=Wdr25 PE=2 SV=1[more]
BLAST of Carg14466 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BFC4|A0A1S3BFC4_CUCME5.0e-28694.32pre-mRNA-processing factor 17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
tr|E5GBJ7|E5GBJ7_CUCME5.0e-28694.32Pre-mRNA splicing factor OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1[more]
tr|A0A1S3BE12|A0A1S3BE12_CUCME1.5e-28594.47pre-mRNA-processing factor 17 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489012... [more]
tr|A0A0A0KQ97|A0A0A0KQ97_CUCSA1.5e-28594.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G601580 PE=4 SV=1[more]
tr|A0A061GY62|A0A061GY62_THECC1.6e-27180.58Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao OX=3641 GN=TC... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Cellular Component
TermDefinition
GO:0071013catalytic step 2 spliceosome
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR032847PRPF17
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0005515 protein binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg14466-RACarg14466-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 157..177
NoneNo IPR availableCOILSCoilCoilcoord: 209..229
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 229..257
NoneNo IPR availableCDDcd00200WD40coord: 282..579
e-value: 1.44722E-65
score: 217.588
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 306..320
score: 33.9
coord: 435..449
score: 29.46
coord: 349..363
score: 29.88
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 409..448
e-value: 2.6E-6
score: 37.0
coord: 497..538
e-value: 0.14
score: 21.2
coord: 323..362
e-value: 4.4E-10
score: 49.5
coord: 541..581
e-value: 3.5E-4
score: 29.9
coord: 365..406
e-value: 3.6
score: 13.5
coord: 452..491
e-value: 10.0
score: 10.6
coord: 279..319
e-value: 6.9E-9
score: 45.5
IPR001680WD40 repeatPFAMPF00400WD40coord: 281..319
e-value: 4.8E-6
score: 27.1
coord: 503..538
e-value: 0.03
score: 15.1
coord: 324..362
e-value: 5.0E-6
score: 27.1
coord: 410..447
e-value: 0.0013
score: 19.4
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 330..371
score: 15.421
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 416..448
score: 12.614
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 286..320
score: 12.881
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3DG3DSA:2.130.10.10coord: 266..581
e-value: 1.2E-95
score: 322.3
IPR032847Pre-mRNA-processing factor 17PANTHERPTHR43979FAMILY NOT NAMEDcoord: 1..581
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 306..320
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 286..590
score: 40.313
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILYSSF50978WD40 repeat-likecoord: 277..579

Synteny