Cp4.1LG09g05060 (gene) Cucurbita pepo (Zucchini)

Overview
NameCp4.1LG09g05060
Typegene
OrganismCucurbita pepo (Cucurbita pepo (Zucchini))
DescriptionPre-mRNA-processing factor 17
LocationCp4.1LG09 : 3338145 .. 3339887 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGATGGAAGCCCTAAACAGCTTACATCTTCACCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTCGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTTGGCTTTGTTGAGGATGCGTCCATTGAGCCATTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAGTACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACAAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCGGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTTGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAA

mRNA sequence

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGATGGAAGCCCTAAACAGCTTACATCTTCACCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTCGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTTGGCTTTGTTGAGGATGCGTCCATTGAGCCATTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAGTACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACAAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCGGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTTGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAA

Coding sequence (CDS)

ATGGATCTTCTCCAGTCGTACACAGATCAAAACGACGATGATGGAAGCCCTAAACAGCTTACATCTTCACCGGAAGCCTCTCCGCCGCGGCTCCTCCCCTCCAAAACCTCGGCGCCCAAGGTTGATGATACAATGTTGGCTCTTACGGTGGCCAACGCCAACAGGACATTATCTAAGCCGATAGACCCAACTCAACATCTAGTTGCCTTCAACCCTACCTACGACCAGCTCTGGGCGCCCATTCTCGGGCCATCTCATCCCTATGCCAAGGATGGCATTGCACAGGGCATGAGAAACCATAAGCTTGGCTTTGTTGAGGATGCGTCCATTGAGCCATTTGTATTTGATGAGCAGTACAACACTTTCCACAAATATGGATATGCTGCTGACCCTTCAGCTTCTGCTGGAAACAATTTCATTGGGGATATGGAGGCTTTGCAGAAGAATGATGCCATATCCGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAGAAGAAAGAAATGAGTGAGAGTGAGGATGTGGAAATGGAGTTGAACCCGGCTGAAGTTGATAACCCGGCGAGTGATGTGTGGTTGATGAAGAATAGGAAGAGCCCTTGGTCTGGGAAGAAGGAAGGTCTGCAAACTGAGCTAACTGAGGAGCAGAAGAAGTACGCAGAAGAGTATGCAAAGAAGAAAGGTGAAGAGAAAGGTGGTGAGAAGGGAGAAGTTACAGCAGATAAGAGTACTTTTCATGGTAAAGAGGAGAGGGACTATCAGGGTAGATCTTGGATTGCACCACCGAAGGACGCCAAGGCCACAAATGATCATTGTTATATACCGAAAAGATTGGTGCATACATGGAGTGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGTCATTTGATTCTTTCAGCGGGTATGGATACCAAGGTGAAGATATGGGATGTGTTCAATTCTGGGAAATGTATGAGAACCTACATGGGTCACTCTCAGGCAGTTCGGGATATTTCGTTTTGTAACGATGGGTCCAAGTTCTTGACTGCTGGGTATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTCAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAGATCGTTCAGTGGGATATGAACACAGGGCAGATTACTCAAGAGTACGATCAACATTTAGGAGCAGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACGTCAAGTGACGACAAGTCGCTCCGTGTTTGGGAATATGGGATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCATTCCATGCCCTCCATATCGGTACACCCCAATACGAATTGGCTTGCAGCACAGAGTTTAGACAATCAAATTCTTATCTATAGCACTAGGGAGAGATTTCAGCTAAACAAGAAGAAGAGGTTTGCTGGCCACATTGTGGCAGGATACGCTTGTCAGGTCAATTTTTCACCAGATGGACGCTTTGTTATGTCTGGTGATGGTGAGGGTAAATGCTGGTTTTGGGACTGGAAAACCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGAGTATGCATTGGCTGTGAGTGGCATCCATTAGAACAGAGTAAAGTAGCAACGTGTGGCTGGGATGGACTGATAAAGTATTGGTAA

Protein sequence

MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKPIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Homology
[Close]
BLAST of Cp4.1LG09g05060 vs. Swiss-Prot
Match: PRP17_HUMAN (Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 5.3e-152
Identity = 281/574 (48.95%), Postives = 371/574 (64.63%), Query Frame = 1 

Query: 20  LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKPIDPTQHLVAFNPTYDQLWA 79
           LT SP +S P L  +  SAP+V            +      +DP    V +NPTY+ ++A
Sbjct: 40  LTKSP-SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFA 99

Query: 80  PILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSAS---AG 139
           P  GP +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS       
Sbjct: 100 PEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVS 159

Query: 140 NNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVDNPASDVW 199
             +IG +E  +KN  ++V+     E  ++K EK+K+  E              N AS++ 
Sbjct: 160 AKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKE--------------NDASNI- 219

Query: 200 LMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGEEKGGEKGEVTADKSTFHGK 259
                  PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H K
Sbjct: 220 --DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVK 279

Query: 260 EERDYQGRSWIAPPKDAKAT------NDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLI 319
           E  DYQGRS++  P+D           + CY+PK+ +H WSGHTKGVSA+R FP  GHL+
Sbjct: 280 EMYDYQGRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLL 339

Query: 320 LSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETG 379
           LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETG
Sbjct: 340 LSCSMDCKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETG 399

Query: 380 QVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTI 439
           Q IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI
Sbjct: 400 QCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTI 459

Query: 440 TFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQ 499
            FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQ
Sbjct: 460 VFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQ 519

Query: 500 ILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFR 559
           ILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWKT K++ 
Sbjct: 520 ILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYS 578

Query: 560 TLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
             K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 580 RFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]
BLAST of Cp4.1LG09g05060 vs. Swiss-Prot
Match: PRP17_MOUSE (Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 538.9 bits (1387), Expect = 6.9e-152
Identity = 270/533 (50.66%), Postives = 357/533 (66.98%), Query Frame = 1 

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP  GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSAS---AGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESE 180
           TF  YGYA DPS         +IG +E  +KN  ++V+     E  ++K EK+K+  E  
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKE-- 191

Query: 181 DVEMELNPAEVDNPASDVWLMKNRKSPWSG--KKEGLQTELTEEQKKYAEEYAK--KKGE 240
                       N AS++        PW+    ++ +     EEQK+  E  AK  KKG+
Sbjct: 192 ------------NDASNI---DGFLGPWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK 251

Query: 241 EKGGEKGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWS 300
           ++  + GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WS
Sbjct: 252 QEEEKPGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWS 311

Query: 301 GHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGS 360
           GHTKGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G+
Sbjct: 312 GHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGT 371

Query: 361 KFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 420
           +FL+A YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+
Sbjct: 372 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 431

Query: 421 NTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMP 480
            +G+I QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP
Sbjct: 432 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP 491

Query: 481 SISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 540
           ++++ PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+S
Sbjct: 492 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVIS 551

Query: 541 GDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           GDG GK   WDWKT K++   K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 552 GDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]
BLAST of Cp4.1LG09g05060 vs. Swiss-Prot
Match: PRP17_SCHPO (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prp17 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-100
Identity = 214/591 (36.21%), Postives = 314/591 (53.13%), Query Frame = 1 

Query: 14  DGSPKQLTSSPEASPPRLLPSKTSAPKVDDTM---LALTVANANRTLSKPIDPTQHLVAF 73
           D   ++ + SP   P  LL ++  AP V D +   L ++    +R L++           
Sbjct: 9   DSEEQENSQSPNIQP--LLHTENLAPAVVDNVKDDLIVSKGGNSRELAR----------- 68

Query: 74  NPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY--NTFHKYGYA 133
           N   +++  P LGP++P+        ++N   G+ E   +  FVF+++Y  NT   YG  
Sbjct: 69  NVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQEYYANTHAIYGKR 128

Query: 134 A--DPSASAGNNFIGDMEALQKN----------DAISVYNIPQHEQKKRKIEKKKEMSES 193
              D  A+   +     + +++           +    Y  P       +     E SE 
Sbjct: 129 NFDDNEATTSTDLKRKSQKIKERREDPGDPSILEGDGAYKGPWAGYGSEQSSSPLEYSEY 188

Query: 194 EDVEMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKG 253
           E+VE     +E D  ++++                 Q EL +EQ    E    +  EE  
Sbjct: 189 EEVESLDVKSEKDTESNNLG----------------QNELLKEQLATPEVETHRSKEE-- 248

Query: 254 GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHT 313
                     +  H     DYQ RS++  P D       +     CYIPK+ + TW GHT
Sbjct: 249 ----------TILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTWKGHT 308

Query: 314 KGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFL 373
           KG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG  FL
Sbjct: 309 KGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRSFL 368

Query: 374 TAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTG 433
           +  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D+ + 
Sbjct: 369 STSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDIRSP 428

Query: 434 QITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSIS 493
            I Q YD HLG +N+ITF++N +RFVT+SDD S+R WEYG PV IK++++  MHSMP ++
Sbjct: 429 DIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSMPRVA 488

Query: 494 VHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDG 553
           + PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV SGD 
Sbjct: 489 LRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVFSGDS 548

Query: 554 EGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYW 581
            G   FWDWKTCK+   L  H G      +HP E SKVAT    DG IKYW
Sbjct: 549 SGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYW 557

[Close]
BLAST of Cp4.1LG09g05060 vs. Swiss-Prot
Match: PRP17_YEAST (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC40 PE=1 SV=2)

HSP 1 Score: 273.5 bits (698), Expect = 5.4e-72
Identity = 145/458 (31.66%), Postives = 246/458 (53.71%), Query Frame = 1 

Query: 130 DPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVEMELNPAEVD 189
           D S+ +  NF       +K +  +++    +E     I K+K      +++      + D
Sbjct: 8   DTSSDSDLNFDEGKSVHEKKNG-NLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGD 67

Query: 190 NPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKGEVTADKSTF 249
            P    W        WS   +   ++ +E QK+  + +     E+    +     + S F
Sbjct: 68  GP----W------GSWSSSDDET-SQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHF 127

Query: 250 HGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHG 309
           +GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK G
Sbjct: 128 YGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTG 187

Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDT 369
           HLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++ +D+ +K WDT
Sbjct: 188 HLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDT 247

Query: 370 ETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHL 429
           ETG+V +       P  V+  P +  +   + G+S+ KI+ +D    +   + Q YD HL
Sbjct: 248 ETGKVKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHL 307

Query: 430 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 489
            ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  A
Sbjct: 308 SSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCA 367

Query: 490 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 549
           QS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW 
Sbjct: 368 QSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWN 427

Query: 550 TCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLI 578
           T ++   +K      I   +WHP E SKV   G  G I
Sbjct: 428 TSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKI 451

[Close]
BLAST of Cp4.1LG09g05060 vs. Swiss-Prot
Match: WDR25_MOUSE (WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.8e-44
Identity = 94/313 (30.03%), Postives = 165/313 (52.72%), Query Frame = 1 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKH--GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EYGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           ++     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + ++T     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]
BLAST of Cp4.1LG09g05060 vs. TrEMBL
Match: E5GBJ7_CUCME (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 570/580 (98.28%), Postives = 578/580 (99.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cp4.1LG09g05060 vs. TrEMBL
Match: A0A0A0KQ97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 569/580 (98.10%), Postives = 578/580 (99.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cp4.1LG09g05060 vs. TrEMBL
Match: A0A061GY62_THECC (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_039496 PE=4 SV=1)

HSP 1 Score: 1080.5 bits (2793), Expect = 0.0e+00
Identity = 519/587 (88.42%), Postives = 550/587 (93.70%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQ-LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSK 60
           MDLLQ+Y D +D D   +Q  TSSP++SPPRL+PSK++APKVDDTMLALT A  ++  SK
Sbjct: 44  MDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTAAKTHQAHSK 103

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDPTQH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDASIE FVFDEQY
Sbjct: 104 PIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIESFVFDEQY 163

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQKNDAISVYNIPQHEQKKRKIEK+KEM   ED 
Sbjct: 164 NTFHKYGYAADPS---GNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEMEVEEDE 223

Query: 181 ----EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEK 240
               E E++P E+DNPASDVWLMKN+ SPW+GKKEG+QTELTEEQKKYAEEYAKKK EEK
Sbjct: 224 VVGGEGEVDPTEIDNPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAKKK-EEK 283

Query: 241 G--GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 300
           G  GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV
Sbjct: 284 GHPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 343

Query: 301 SAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAG 360
           SAIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAG
Sbjct: 344 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAG 403

Query: 361 YDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQIT 420
           YDK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQIT
Sbjct: 404 YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQIT 463

Query: 421 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHP 480
           QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HP
Sbjct: 464 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 523

Query: 481 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 540
           NTNWLAAQSLDNQILIYSTR RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK
Sbjct: 524 NTNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 583

Query: 541 CWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           CWFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 584 CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 626

[Close]
BLAST of Cp4.1LG09g05060 vs. TrEMBL
Match: A0A067JRQ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17735 PE=4 SV=1)

HSP 1 Score: 1077.8 bits (2786), Expect = 0.0e+00
Identity = 512/584 (87.67%), Postives = 547/584 (93.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQL-TSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSK 60
           MDLL+ Y D ++     +Q   SSP++SPPRLLP+K++APKVDDTMLALTVA AN+TLSK
Sbjct: 1   MDLLRGYKDDDELGEHDRQNPNSSPDSSPPRLLPAKSTAPKVDDTMLALTVAQANKTLSK 60

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDP  H VAFNPTYDQLWAPI GP+HP+AKDGIAQGMRNHKLGFVEDA+I+ FVFDEQY
Sbjct: 61  PIDPVNHAVAFNPTYDQLWAPIYGPAHPFAKDGIAQGMRNHKLGFVEDAAIDSFVFDEQY 120

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPSAS GNN+IGD++AL+KND ISVYNIPQHEQK+RK EKKKE  E ED 
Sbjct: 121 NTFHKYGYAADPSASEGNNYIGDLDALKKNDGISVYNIPQHEQKRRKFEKKKETEEGEDE 180

Query: 181 EME--LNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEE-KG 240
           ++   ++ AE++NPA+D WLMKNRKSPW+GKKEGLQTELTEEQKKYAEEYAKKK E+  G
Sbjct: 181 DVGPVVDKAEIENPATDAWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEYAKKKEEKGAG 240

Query: 241 GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAI 300
            ++GEV ADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAI
Sbjct: 241 ADRGEVVADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAI 300

Query: 301 RFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDK 360
           RFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAGYDK
Sbjct: 301 RFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYDK 360

Query: 361 KIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEY 420
            IKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEY
Sbjct: 361 NIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEY 420

Query: 421 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTN 480
           DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSI+VHPNTN
Sbjct: 421 DQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIAVHPNTN 480

Query: 481 WLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 540
           W AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF
Sbjct: 481 WFAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWF 540

Query: 541 WDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           WDWK+CKVFRTLKCHEGVCIGCEWHP EQSKVATCGWDGLIKYW
Sbjct: 541 WDWKSCKVFRTLKCHEGVCIGCEWHPFEQSKVATCGWDGLIKYW 584

[Close]
BLAST of Cp4.1LG09g05060 vs. TrEMBL
Match: A0A0D2QSZ1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G197400 PE=4 SV=1)

HSP 1 Score: 1076.6 bits (2783), Expect = 0.0e+00
Identity = 514/586 (87.71%), Postives = 556/586 (94.88%), Query Frame = 1 

Query: 1   MDLLQSYTDQND-DDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSK 60
           MDLLQ+Y D++D +D S +  TSSP++SPPRL+PSK++APKVDDTMLALTVA A+++ SK
Sbjct: 69  MDLLQTYADKSDGEDQSHQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTVAKAHQSHSK 128

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDP+QH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDA+IE FVFDEQY
Sbjct: 129 PIDPSQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDAAIESFVFDEQY 188

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQ+NDAISVYNIPQHEQKKRKIEK K++   ++V
Sbjct: 189 NTFHKYGYAADPS---GNNYIGDLDALQENDAISVYNIPQHEQKKRKIEKMKDVEMEDEV 248

Query: 181 ---EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKG 240
              E E++P E+DNPASDVWLMKN+KSPW+GK+EG+QTELTEEQKKYAEEYAKKK EEKG
Sbjct: 249 VGGEHEVDPTEIDNPASDVWLMKNKKSPWAGKREGVQTELTEEQKKYAEEYAKKK-EEKG 308

Query: 241 --GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVS 300
             GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRL+HTWSGHTKGVS
Sbjct: 309 HSGEKGEHLVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLIHTWSGHTKGVS 368

Query: 301 AIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGY 360
           AIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDGSKFLTAGY
Sbjct: 369 AIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGY 428

Query: 361 DKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQ 420
           DK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQ TQ
Sbjct: 429 DKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQTTQ 488

Query: 421 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPN 480
           EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMP+IS+HPN
Sbjct: 489 EYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPAISLHPN 548

Query: 481 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 540
           TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC
Sbjct: 549 TNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKC 608

Query: 541 WFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           WFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 609 WFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 650

[Close]
BLAST of Cp4.1LG09g05060 vs. TAIR10
Match: AT1G10580.1 (AT1G10580.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 988.4 bits (2554), Expect = 1.9e-288
Identity = 473/582 (81.27%), Postives = 522/582 (89.69%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDL+QSY ++++       + SSPE+SPPR+L +K+SAP+VDDT LALTVAN N++ SKP
Sbjct: 1   MDLIQSYEEEDE------AVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP+ GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHK GYAADPS   G N++GD+EA +KND +SV+NIPQ EQK+RKIE+ KE  E E+ +
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGE--EKGGE 240
            E+ P E +NP ++ WL KNRKSPWS KKE +Q ELTEEQKKYAE++AKKK E  ++G  
Sbjct: 181 EEIEP-EAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGET 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTAGYDK I
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NTG++TQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           WK+CKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 572

[Close]
BLAST of Cp4.1LG09g05060 vs. TAIR10
Match: AT5G54520.1 (AT5G54520.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 206.5 bits (524), Expect = 4.6e-53
Identity = 102/308 (33.12%), Postives = 167/308 (54.22%), Query Frame = 1 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 397
           V+D+ +   G   L+ GYD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNC--NVFLSG 267

Query: 398 MSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEY 457
            S   +  WD+   +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+K+  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

[Close]
BLAST of Cp4.1LG09g05060 vs. TAIR10
Match: AT2G43770.1 (AT2G43770.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 8.1e-26
Identity = 74/291 (25.43%), Postives = 127/291 (43.64%), Query Frame = 1 

Query: 287 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 346
           SGH   V  ++F P  G LI S   D ++ +W V    K      GH  A+ D+ + +DG
Sbjct: 50  SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 109

Query: 347 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 406
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 110 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 169

Query: 407 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSM 466
           M      Q +      +  ++F D   +  T   D  ++VW+         + E H  ++
Sbjct: 170 MRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTI 229

Query: 467 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 526
             +S+ P+ ++L    +DN++ ++  R     N+  K F G  H       + ++SPDG 
Sbjct: 230 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 289

Query: 527 FVMSGDGEGKCWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 575
            V +G  +     WD  + +    L  H G    C +HP E   + +C  D
Sbjct: 290 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335

[Close]
BLAST of Cp4.1LG09g05060 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 115.2 bits (287), Expect = 1.4e-25
Identity = 61/218 (27.98%), Postives = 115/218 (52.75%), Query Frame = 1 

Query: 282 LVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDIS 341
           L+ T  GHT     + F P+  ++I+S   D  V+IWDV  +GKC++    HS  V  + 
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDV-TTGKCLKVLPAHSDPVTAVD 164

Query: 342 FCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 401
           F  DGS  +++ YD   + WD+ TG  + T    + P V  V+ +P+      +L G  D
Sbjct: 165 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG---KFILVGTLD 224

Query: 402 KKIVQWDMNTGQITQEYDQHLGA---VNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIK 461
             +  W++++ +  + Y  H+ A   +++   V N +R V+ S+D  + +WE     +++
Sbjct: 225 NTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ 284

Query: 462 YISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRE 495
            + E H  ++ +++ HP  N +A+ SLD  + I++ ++
Sbjct: 285 KL-EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316

[Close]
BLAST of Cp4.1LG09g05060 vs. TAIR10
Match: AT5G08390.1 (AT5G08390.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-14
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 280 KRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRD 339
           K  +HT+ GHT+GV+ +RF P  G  I+S G D  VK+WD+  +GK +  +  H   ++ 
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQS 192

Query: 340 ISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSD 399
           + F        T   DK +K+WD ET ++I +  T +   V  L  + D +++L      
Sbjct: 193 LDFHPHEFLLATGSADKTVKFWDLETFELIGSGGT-ETTGVRCLTFNPDGKSVLCGLQES 252

Query: 400 KKIVQWD 407
            KI  W+
Sbjct: 253 LKIFSWE 256

[Close]
BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: gi|659090806|ref|XP_008446212.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 570/580 (98.28%), Postives = 578/580 (99.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: gi|659090804|ref|XP_008446211.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo])

HSP 1 Score: 1195.3 bits (3091), Expect = 0.0e+00
Identity = 570/580 (98.28%), Postives = 578/580 (99.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRL+PSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: gi|449434919|ref|XP_004135243.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus])

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 569/580 (98.10%), Postives = 578/580 (99.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: gi|778705063|ref|XP_011655627.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus])

HSP 1 Score: 1193.7 bits (3087), Expect = 0.0e+00
Identity = 569/580 (98.10%), Postives = 578/580 (99.66%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSKP 60
           MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANAN+TLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPI GPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDVE 180
           TFHKYGYAADPSASAGNN+IGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSE+ED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 MELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240
            E+NPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match: gi|590581776|ref|XP_007014440.1| (Transducin/WD40 repeat-like superfamily protein [Theobroma cacao])

HSP 1 Score: 1080.5 bits (2793), Expect = 0.0e+00
Identity = 519/587 (88.42%), Postives = 550/587 (93.70%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDDDGSPKQ-LTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANRTLSK 60
           MDLLQ+Y D +D D   +Q  TSSP++SPPRL+PSK++APKVDDTMLALT A  ++  SK
Sbjct: 44  MDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTAAKTHQAHSK 103

Query: 61  PIDPTQHLVAFNPTYDQLWAPILGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDPTQH+VAFNPTYDQLWAPI GP+HPYAKDGIAQGMRNHKLGFVEDASIE FVFDEQY
Sbjct: 104 PIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIESFVFDEQY 163

Query: 121 NTFHKYGYAADPSASAGNNFIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSESEDV 180
           NTFHKYGYAADPS   GNN+IGD++ALQKNDAISVYNIPQHEQKKRKIEK+KEM   ED 
Sbjct: 164 NTFHKYGYAADPS---GNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEMEVEEDE 223

Query: 181 ----EMELNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEK 240
               E E++P E+DNPASDVWLMKN+ SPW+GKKEG+QTELTEEQKKYAEEYAKKK EEK
Sbjct: 224 VVGGEGEVDPTEIDNPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAKKK-EEK 283

Query: 241 G--GEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 300
           G  GEKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV
Sbjct: 284 GHPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 343

Query: 301 SAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAG 360
           SAIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAG
Sbjct: 344 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAG 403

Query: 361 YDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQIT 420
           YDK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQIT
Sbjct: 404 YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQIT 463

Query: 421 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEYGIPVVIKYISEPHMHSMPSISVHP 480
           QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWE+GIPVVIKYISEPHMHSMPSIS+HP
Sbjct: 464 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 523

Query: 481 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 540
           NTNWLAAQSLDNQILIYSTR RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK
Sbjct: 524 NTNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 583

Query: 541 CWFWDWKTCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           CWFWDWK+CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 584 CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 626

The following BLAST results are available for this feature:
BLAST of Cp4.1LG09g05060 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRP17_HUMAN5.3e-15248.95Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1[more]
PRP17_MOUSE6.9e-15250.66Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=2 SV=1[more]
PRP17_SCHPO1.6e-10036.21Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
PRP17_YEAST5.4e-7231.66Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
WDR25_MOUSE4.8e-4430.03WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1[more]
BLAST of Cp4.1LG09g05060 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBJ7_CUCME0.0e+0098.28Pre-mRNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KQ97_CUCSA0.0e+0098.10Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601580 PE=4 SV=1[more]
A0A061GY62_THECC0.0e+0088.42Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_039496... [more]
A0A067JRQ5_JATCU0.0e+0087.67Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17735 PE=4 SV=1[more]
A0A0D2QSZ1_GOSRA0.0e+0087.71Uncharacterized protein OS=Gossypium raimondii GN=B456_001G197400 PE=4 SV=1[more]
BLAST of Cp4.1LG09g05060 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10580.11.9e-28881.27 Transducin/WD40 repeat-like superfamily protein[more]
AT5G54520.14.6e-5333.12 Transducin/WD40 repeat-like superfamily protein[more]
AT2G43770.18.1e-2625.43 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.11.4e-2527.98 Transducin/WD40 repeat-like superfamily protein[more]
AT5G08390.11.1e-1432.28 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of Cp4.1LG09g05060 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090806|ref|XP_008446212.1|0.0e+0098.28PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo][more]
gi|659090804|ref|XP_008446211.1|0.0e+0098.28PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo][more]
gi|449434919|ref|XP_004135243.1|0.0e+0098.10PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus][more]
gi|778705063|ref|XP_011655627.1|0.0e+0098.10PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus][more]
gi|590581776|ref|XP_007014440.1|0.0e+0088.42Transducin/WD40 repeat-like superfamily protein [Theobroma cacao][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Cellular Component
TermDefinition
GO:0071013catalytic step 2 spliceosome
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: INTERPRO
TermDefinition
IPR020472G-protein_beta_WD-40_rep
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0015976 carbon utilization
biological_process GO:0006730 one-carbon metabolic process
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0005515 protein binding
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Cp4.1LG09g05060.1Cp4.1LG09g05060.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita pepo
Date Performed: 2017-12-02
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 324..362
score: 6.4E-6coord: 281..319
score: 5.5E-6coord: 503..538
score: 0.031coord: 410..447
score: 0
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 279..319
score: 6.9E-9coord: 452..491
score: 10.0coord: 409..448
score: 2.6E-6coord: 497..538
score: 0.14coord: 365..406
score: 3.6coord: 323..362
score: 4.4E-10coord: 541..580
score:
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 416..448
score: 12.614coord: 286..320
score: 12.881coord: 330..371
score: 15
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 150..173
score: 9.4E-74coord: 274..580
score: 9.4
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 286..580
score: 44
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 277..580
score: 9.89
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 306..320
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 306..320
score: 5.6E-5coord: 349..363
score: 5.6E-5coord: 435..449
score: 5.
NoneNo IPR availableunknownCoilCoilcoord: 209..229
score: -coord: 157..177
scor
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 54..580
score: 3.3E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Cp4.1LG09g05060Cucsa.286030Cucumber (Gy14) v1cgycpeB0744
Cp4.1LG09g05060CmaCh18G008000Cucurbita maxima (Rimu)cmacpeB415
Cp4.1LG09g05060CmaCh04G017290Cucurbita maxima (Rimu)cmacpeB694
Cp4.1LG09g05060CmoCh04G018120Cucurbita moschata (Rifu)cmocpeB646
Cp4.1LG09g05060CmoCh18G008050Cucurbita moschata (Rifu)cmocpeB376
Cp4.1LG09g05060Cla010088Watermelon (97103) v1cpewmB028
Cp4.1LG09g05060Csa5G601580Cucumber (Chinese Long) v2cpecuB047
Cp4.1LG09g05060MELO3C011999Melon (DHL92) v3.5.1cpemeB021
Cp4.1LG09g05060ClCG05G025310Watermelon (Charleston Gray)cpewcgB041
Cp4.1LG09g05060CSPI05G22710Wild cucumber (PI 183967)cpecpiB042
Cp4.1LG09g05060Lsi04G005460Bottle gourd (USVL1VR-Ls)cpelsiB030
Cp4.1LG09g05060MELO3C011999.2Melon (DHL92) v3.6.1cpemedB025
Cp4.1LG09g05060MELO3C011851.2Melon (DHL92) v3.6.1cpemedB029
Cp4.1LG09g05060CsaV3_5G031590Cucumber (Chinese Long) v3cpecucB0051
Cp4.1LG09g05060CsaV3_5G030120Cucumber (Chinese Long) v3cpecucB0044
Cp4.1LG09g05060Bhi07G001379Wax gourdcpewgoB0054
Cp4.1LG09g05060CsGy5G022230Cucumber (Gy14) v2cgybcpeB588
Cp4.1LG09g05060Carg14466Silver-seed gourdcarcpeB1017
Cp4.1LG09g05060Carg14344Silver-seed gourdcarcpeB0341
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Cp4.1LG09g05060Cp4.1LG01g15330Cucurbita pepo (Zucchini)cpecpeB033
The following block(s) are covering this gene:
GeneOrganismBlock
Cp4.1LG09g05060Silver-seed gourdcarcpeB0886
Cp4.1LG09g05060Cucurbita maxima (Rimu)cmacpeB167