CmoCh04G018120 (gene) Cucurbita moschata (Rifu)

Overview
NameCmoCh04G018120
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionPre-mRNA-processing factor 17
LocationCmo_Chr04 : 9137638 .. 9139431 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGATCTTCTCCAGTCGTACACAGATCAAAATGATGAAGACGGAAGCCCCGAGCAGGTTGCGTCTTCACCAGAAGCTTCTCCGCCTAGGCTCCTCCCCGCCAAAACCTCGGCGCCCAAGGTTGATGATACACTGTTAGCCCTCACGGTGGCCAACGCCAACCAGACCCTCTCAAAGCCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACTTACGACCAACTCTGGGCGCCCATTTACGGCCCATCACATCCCTATGCCAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAGCCATTTGTCTTCGATGAGCAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAAGCTTTGCAGAAGAATGATGCCATCTCTGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAAAATGAGGATGTGGAAGAGGACTTGAATCTGGCTGAAGTAGATAATCCAGCGAGTGATGTGTGGTTGATGAAGAACAGGAAGAGTCCATGGTCTGGGAAGAAGGAAGGTCTGGAAACCGAGCTGACTGAGGAGCAGAAGAAATATGCAGAAGAGTACGCAAAGAAGAAAGGTGAAGAGAAAGGTTCTGAGAAGGGAGAAGTTACCGCGGACAAGAGTACTTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCGAAGGATGCCAAGGCCACAAATGATCATTGCTATATACCGAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTGATTCTTTCAGCTGGTATGGATACCAAGGTAAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCAGTTCGAGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAGTGGGATATGAACACGGGACAGATTACGCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACATCAAGCGATGACAAGTCGCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCACTCCATGCCCTCCATTTCTGTACACCCCAATACGAATTGGCTCGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACCAGGGAGAGATTTCAGCTGAACAAGAAAAAGAGATTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCACCAGATGGACGTTTTGTTATGTCAGGTGATGGTGAGGGAAAATGCTGGTTTTGGGACTGGAAATCCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACGTGCGGCTGGGATGGACTGATAAAGTATTGGTTAGTAAATCTCTTTACCTTGGTGTTTTACTTTTTGAAAGTTCTCAACTTTTAA

mRNA sequence

ATGGATCTTCTCCAGTCGTACACAGATCAAAATGATGAAGACGGAAGCCCCGAGCAGGTTGCGTCTTCACCAGAAGCTTCTCCGCCTAGGCTCCTCCCCGCCAAAACCTCGGCGCCCAAGGTTGATGATACACTGTTAGCCCTCACGGTGGCCAACGCCAACCAGACCCTCTCAAAGCCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACTTACGACCAACTCTGGGCGCCCATTTACGGCCCATCACATCCCTATGCCAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAGCCATTTGTCTTCGATGAGCAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAAGCTTTGCAGAAGAATGATGCCATCTCTGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAAAATGAGGATGTGGAAGAGGACTTGAATCTGGCTGAAGTAGATAATCCAGCGAGTGATGTGTGGTTGATGAAGAACAGGAAGAGTCCATGGTCTGGGAAGAAGGAAGGTCTGGAAACCGAGCTGACTGAGGAGCAGAAGAAATATGCAGAAGAGTACGCAAAGAAGAAAGGTGAAGAGAAAGGTTCTGAGAAGGGAGAAGTTACCGCGGACAAGAGTACTTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCGAAGGATGCCAAGGCCACAAATGATCATTGCTATATACCGAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTGATTCTTTCAGCTGGTATGGATACCAAGGTAAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCAGTTCGAGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAGTGGGATATGAACACGGGACAGATTACGCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACATCAAGCGATGACAAGTCGCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCACTCCATGCCCTCCATTTCTGTACACCCCAATACGAATTGGCTCGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACCAGGGAGAGATTTCAGCTGAACAAGAAAAAGAGATTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCACCAGATGGACGTTTTGTTATGTCAGGTGATGGTGAGGGAAAATGCTGGTTTTGGGACTGGAAATCCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACGTGCGGCTGGGATGGACTGATAAAGTATTGGTTAGTAAATCTCTTTACCTTGGTGTTTTACTTTTTGAAAGTTCTCAACTTTTAA

Coding sequence (CDS)

ATGGATCTTCTCCAGTCGTACACAGATCAAAATGATGAAGACGGAAGCCCCGAGCAGGTTGCGTCTTCACCAGAAGCTTCTCCGCCTAGGCTCCTCCCCGCCAAAACCTCGGCGCCCAAGGTTGATGATACACTGTTAGCCCTCACGGTGGCCAACGCCAACCAGACCCTCTCAAAGCCGATAGACCCAACTCAACATCTCGTTGCCTTCAACCCCACTTACGACCAACTCTGGGCGCCCATTTACGGCCCATCACATCCCTATGCCAAGGATGGCATTGCACAGGGCATGCGAAACCACAAGCTAGGCTTCGTGGAGGATGCGTCCATTGAGCCATTTGTCTTCGATGAGCAGTACAACACTTTCCATAAGTATGGATATGCTGCTGACCCATCAGCTTCTGCTGGAAACAATTACATTGGGGACATGGAAGCTTTGCAGAAGAATGATGCCATCTCTGTGTATAACATTCCACAGCATGAGCAAAAGAAGCGGAAGATTGAGAAAAAGAAAGAAATGAGTGAAAATGAGGATGTGGAAGAGGACTTGAATCTGGCTGAAGTAGATAATCCAGCGAGTGATGTGTGGTTGATGAAGAACAGGAAGAGTCCATGGTCTGGGAAGAAGGAAGGTCTGGAAACCGAGCTGACTGAGGAGCAGAAGAAATATGCAGAAGAGTACGCAAAGAAGAAAGGTGAAGAGAAAGGTTCTGAGAAGGGAGAAGTTACCGCGGACAAGAGTACTTTTCATGGTAAAGAGGAAAGGGACTATCAGGGTAGATCTTGGATTGCACCCCCGAAGGATGCCAAGGCCACAAATGATCATTGCTATATACCGAAAAGATTGGTGCATACATGGAGCGGGCACACAAAGGGTGTATCTGCTATTAGATTCTTCCCTAAACATGGCCATTTGATTCTTTCAGCTGGTATGGATACCAAGGTAAAGATATGGGATGTGTTCAATTCTGGTAAATGTATGAGAACCTACATGGGTCACTCTCAAGCAGTTCGAGATATTTCATTTTGTAATGATGGGTCTAAGTTTTTGACTGCTGGATATGATAAAAAGATTAAGTATTGGGATACAGAAACAGGGCAAGTGATATCAACCTTCTCCACCGGGAAAATTCCTTATGTAGTTAAGCTTAATCCTGATGATGATAAGCAGAATATTTTGCTGGCAGGGATGAGTGATAAGAAAATCGTTCAGTGGGATATGAACACGGGACAGATTACGCAAGAGTACGATCAACATTTAGGAGCGGTGAATACCATTACATTTGTAGACAATAATAGGAGGTTTGTCACATCAAGCGATGACAAGTCGCTCCGTGTTTGGGAATTTGGAATTCCTGTTGTTATTAAGTATATTAGTGAGCCTCATATGCACTCCATGCCCTCCATTTCTGTACACCCCAATACGAATTGGCTCGCAGCACAGAGTTTAGACAATCAAATTCTTATTTATAGCACCAGGGAGAGATTTCAGCTGAACAAGAAAAAGAGATTTGCTGGGCACATTGTGGCAGGATATGCTTGTCAGGTTAATTTTTCACCAGATGGACGTTTTGTTATGTCAGGTGATGGTGAGGGAAAATGCTGGTTTTGGGACTGGAAATCCTGCAAGGTATTCAGAACTCTCAAGTGTCACGAAGGTGTATGCATTGGGTGTGAGTGGCATCCATTGGAGCAAAGTAAAGTAGCAACGTGCGGCTGGGATGGACTGATAAAGTATTGGTTAGTAAATCTCTTTACCTTGGTGTTTTACTTTTTGAAAGTTCTCAACTTTTAA
Homology
[Close]
BLAST of CmoCh04G018120 vs. Swiss-Prot
Match: PRP17_MOUSE (Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=2 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 5.4e-152
Identity = 270/533 (50.66%), Postives = 357/533 (66.98%), Query Frame = 1 

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           +DP    V +NPTY+ ++AP +GP +P+    +A   RN   G+ E A I  F+F++Q  
Sbjct: 72  LDPAVKEVQYNPTYETMFAPEFGPENPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRR 131

Query: 121 TFHKYGYAADPSAS---AGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENE 180
           TF  YGYA DPS         YIG +E  +KN  ++V+     E  ++K EK+K+  EN+
Sbjct: 132 TFATYGYALDPSLDNHQVSAKYIGSVEEAEKNQGLTVF-----ETGQKKTEKRKKFKEND 191

Query: 181 DVEEDLNLAEVDNPASDVWLMKNRKSPWSG--KKEGLETELTEEQKKYAEEYAK--KKGE 240
               D  L                  PW+    ++ +     EEQK+  E  AK  KKG+
Sbjct: 192 ASNIDGFLG-----------------PWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGK 251

Query: 241 EKGSEKGEVTADKSTFHGKEERDYQGRSWIAPPKD------AKATNDHCYIPKRLVHTWS 300
           ++  + GE   +K+  H KE  DYQGRS++  P+D      +    + CY+PK+ +H WS
Sbjct: 252 QEEEKPGE---EKTILHVKEMYDYQGRSYLHIPQDVGVNLRSSVPPEKCYLPKKQIHVWS 311

Query: 301 GHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGS 360
           GHTKGVSA+R FP  GHL+LS  MD K+K+W+V+   +C+RT++GHS+AVRDI F   G+
Sbjct: 312 GHTKGVSAVRLFPLSGHLLLSCSMDCKIKLWEVYGDRRCLRTFIGHSKAVRDICFNTAGT 371

Query: 361 KFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDM 420
           +FL+A YD+ +K WDTETGQ IS F+  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+
Sbjct: 372 QFLSAAYDRYLKLWDTETGQCISRFTNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDI 431

Query: 421 NTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMP 480
            +G+I QEYD+HLGAVNTI FVD NRRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP
Sbjct: 432 RSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMP 491

Query: 481 SISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMS 540
           ++++ PN  WLA QS+DNQILI+  + RF+LNKKK F GH+VAGYACQV+FSPD  +V+S
Sbjct: 492 AVTLSPNGKWLACQSMDNQILIFGAQNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVIS 551

Query: 541 GDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           GDG GK   WDWK+ K++   K H+ VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 552 GDGNGKLNIWDWKTTKLYSRFKAHDKVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]
BLAST of CmoCh04G018120 vs. Swiss-Prot
Match: PRP17_HUMAN (Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 1.2e-151
Identity = 278/568 (48.94%), Postives = 367/568 (64.61%), Query Frame = 1 

Query: 26  ASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPS 85
           +S P L  A  SAP+V            +      +DP    V +NPTY+ ++AP +GP 
Sbjct: 45  SSKPSLAVAVDSAPEV--------AVKEDLETGVHLDPAVKEVQYNPTYETMFAPEFGPE 104

Query: 86  HPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTFHKYGYAADPSAS---AGNNYIGD 145
           +P+    +A   RN   G+ E A I  F+F++Q  TF  YGYA DPS         YIG 
Sbjct: 105 NPFRTQQMA-APRNMLSGYAEPAHINDFMFEQQRRTFATYGYALDPSLDNHQVSAKYIGS 164

Query: 146 MEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEEDLNLAEVDNPASDVWLMKNRK 205
           +E  +KN  ++V+     E  ++K EK+K+  EN+    D  L                 
Sbjct: 165 VEEAEKNQGLTVF-----ETGQKKTEKRKKFKENDASNIDGFLG---------------- 224

Query: 206 SPWSG--KKEGLETELTEEQKKYAEEYAK--KKGEEKGSEKGEVTADKSTFHGKEERDYQ 265
            PW+    ++ +     EEQK+  E  AK  KKG+++  + GE   +K+  H KE  DYQ
Sbjct: 225 -PWAKYVDEKDVAKPSEEEQKELDEITAKRQKKGKQEEEKPGE---EKTILHVKEMYDYQ 284

Query: 266 GRSWIAPPKDAKAT------NDHCYIPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMD 325
           GRS++  P+D           + CY+PK+ +H WSGHTKGVSA+R FP  GHL+LS  MD
Sbjct: 285 GRSYLHIPQDVGVNLRSTMPPEKCYLPKKQIHVWSGHTKGVSAVRLFPLSGHLLLSCSMD 344

Query: 326 TKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTF 385
            K+K+W+V+   +C+RT++GHS+AVRDI F   G++FL+A YD+ +K WDTETGQ IS F
Sbjct: 345 CKIKLWEVYGERRCLRTFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQCISRF 404

Query: 386 STGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNN 445
           +  K+PY VK NPD+DKQN+ +AGMSDKKIVQWD+ +G+I QEYD+HLGAVNTI FVD N
Sbjct: 405 TNRKVPYCVKFNPDEDKQNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDEN 464

Query: 446 RRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYST 505
           RRFV++SDDKSLRVWE+ IPV  KYI+EP MHSMP++++ PN  WLA QS+DNQILI+  
Sbjct: 465 RRFVSTSDDKSLRVWEWDIPVDFKYIAEPSMHSMPAVTLSPNGKWLACQSMDNQILIFGA 524

Query: 506 RERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHE 565
           + RF+LNKKK F GH+VAGYACQV+FSPD  +V+SGDG GK   WDWK+ K++   K H+
Sbjct: 525 QNRFRLNKKKIFKGHMVAGYACQVDFSPDMSYVISGDGNGKLNIWDWKTTKLYSRFKAHD 578

Query: 566 GVCIGCEWHPLEQSKVATCGWDGLIKYW 581
            VCIG  WHP E SKV TCGWDGLIK W
Sbjct: 585 KVCIGAVWHPHETSKVITCGWDGLIKLW 578

[Close]
BLAST of CmoCh04G018120 vs. Swiss-Prot
Match: PRP17_SCHPO (Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=prp17 PE=1 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.7e-100
Identity = 218/595 (36.64%), Postives = 316/595 (53.11%), Query Frame = 1 

Query: 3   LLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKPID 62
           L+ +Y+  ++E    ++ + SP   P  LL  +  AP V D        N    L     
Sbjct: 2   LVANYSSDSEE----QENSQSPNIQP--LLHTENLAPAVVD--------NVKDDLIVSKG 61

Query: 63  PTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYNTF 122
                +A N   +++  P  GP++P+        ++N   G+ E   +  FVF+++Y   
Sbjct: 62  GNSRELARNVPVNEMVQPALGPANPFVTKE-QDSIKNSITGYAEREYVPNFVFNQEYY-- 121

Query: 123 HKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEED 182
                 A+  A  G     D EA    D             KRK +K KE  E+     D
Sbjct: 122 ------ANTHAIYGKRNFDDNEATTSTDL------------KRKSQKIKERREDPG---D 181

Query: 183 LNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTE--EQKKYAEEYAKKKGEEKGSEKG 242
            ++ E D      W     +   S   E  E E  E  + K   +  +   G+ +  ++ 
Sbjct: 182 PSILEGDGAYKGPWAGYGSEQS-SSPLEYSEYEEVESLDVKSEKDTESNNLGQNELLKEQ 241

Query: 243 EVTADKSTFHGKEER--------DYQGRSWIAPPKDA------KATNDHCYIPKRLVHTW 302
             T +  T   KEE         DYQ RS++  P D       +     CYIPK+ + TW
Sbjct: 242 LATPEVETHRSKEETILHKDRLFDYQNRSYMHVPNDVGINLSEEPGEQTCYIPKKHIFTW 301

Query: 303 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 362
            GHTKG+S +RFFP  GHL+LS  MD ++KIW+V++    +RT+ GH++ +RD+SF  DG
Sbjct: 302 KGHTKGISCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDG 361

Query: 363 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 422
             FL+  +DK IK WDTE G+ ++ F++ ++   VK   D DK N  LAG +DK+I+Q+D
Sbjct: 362 RSFLSTSFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFD 421

Query: 423 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 482
           + +  I Q YD HLG +N+ITF++N +RFVT+SDD S+R WE+G PV IK++++  MHSM
Sbjct: 422 IRSPDIVQAYDHHLGGINSITFLENGKRFVTTSDDSSMRFWEYGTPVPIKFVADIAMHSM 481

Query: 483 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVM 542
           P +++ PN   +A QSLDN I +YS  E+++ NKKK F G+  +GY+ +V FSPDGRFV 
Sbjct: 482 PRVALRPNGKSIACQSLDNCIYVYSAYEKYRQNKKKVFKGYSCSGYSLEVGFSPDGRFVF 541

Query: 543 SGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCG-WDGLIKYW 581
           SGD  G   FWDWK+CK+   L  H G      +HP E SKVAT    DG IKYW
Sbjct: 542 SGDSSGNACFWDWKTCKLMAKLPAHSGPVQSMAFHPQETSKVATSSIVDGSIKYW 557

[Close]
BLAST of CmoCh04G018120 vs. Swiss-Prot
Match: PRP17_YEAST (Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC40 PE=1 SV=2)

HSP 1 Score: 268.9 bits (686), Expect = 1.4e-70
Identity = 143/458 (31.22%), Postives = 246/458 (53.71%), Query Frame = 1 

Query: 130 DPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVEEDLNLAEVD 189
           D S+ +  N+       +K +  +++    +E     I K+K      +++      + D
Sbjct: 8   DTSSDSDLNFDEGKSVHEKKNG-NLHEDTSYEPSSNNIHKRKSHFTKSELKRRRKTRKGD 67

Query: 190 NPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKGEVTADKSTF 249
            P    W        WS   +   ++ +E QK+  + +     E+    +     + S F
Sbjct: 68  GP----W------GSWSSSDDET-SQASETQKEDQDIFVHALAEDNLDSEQIEVEEVSHF 127

Query: 250 HGKEERDYQGRSWIAPPKDA------KATNDHCYIPKRLVHTWSGHTKGVSAIRFFPKHG 309
           +GK E+DYQGR ++ PP D       +  +  CY+PK+++  + GH +G +A++F PK G
Sbjct: 128 YGKSEKDYQGRGYLYPPNDVDVDLREERISFRCYLPKKVIRNYPGHPEGTTALKFLPKTG 187

Query: 310 HLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKYWDT 369
           HLILS G D  +KIWD ++  +C+R + GH++ ++ + F  D   FL++ +D+ +K WDT
Sbjct: 188 HLILSGGNDHTIKIWDFYHDYECLRDFQGHNKPIKALRFTEDCQSFLSSSFDRSVKIWDT 247

Query: 370 ETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ---ITQEYDQHL 429
           ETG+V +       P  V+  P +  +   + G+S+ KI+ +D    +   + Q YD HL
Sbjct: 248 ETGKVKTRLHLNSTPADVESRPTNPHE--FIVGLSNSKILHYDDRVSENQGLVQTYDHHL 307

Query: 430 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 489
            ++  + +  +  +F++SS+DK++R+WE  I V IK IS+   HSMP ++VHP+ N+  A
Sbjct: 308 SSILALKYFPDGSKFISSSEDKTVRIWENQINVPIKQISDTAQHSMPFLNVHPSQNYFCA 367

Query: 490 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 549
           QS+DN+I  +S + +++ + KK F GH  AGY   + FS DGR++ SGD + + + WDW 
Sbjct: 368 QSMDNRIYSFSLKPKYKRHPKKIFKGHSSAGYGISLAFSGDGRYICSGDSKSRLFTWDWN 427

Query: 550 SCKVFRTLKCHEGVCI-GCEWHPLEQSKVATCGWDGLI 578
           + ++   +K      I   +WHP E SKV   G  G I
Sbjct: 428 TSRLLNNIKIPGNKPITQVDWHPQETSKVICSGAAGKI 451

[Close]
BLAST of CmoCh04G018120 vs. Swiss-Prot
Match: WDR25_MOUSE (WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 8.4e-44
Identity = 94/313 (30.03%), Postives = 165/313 (52.72%), Query Frame = 1 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKH--GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQ 337
           +PK+++    GH   V++I++ P     H++LSA MD   K+W+  +SG C++TY  HS+
Sbjct: 225 VPKKVLFHLRGHRGPVNSIQWCPVFCKSHMLLSASMDKTFKVWNAVDSGHCLQTYSVHSE 284

Query: 338 AVRDISFCNDGSKFLTAGYDKKIKYWDTETG-QVISTFSTGKIPYVVKLNPDDDKQNILL 397
           AVR   +   G + L+ G+D  +   D ETG QV S  S  ++   +K +P D   N+ L
Sbjct: 285 AVRAARWSPCGRRILSGGFDFALHLTDLETGTQVFSGQSDFRVT-TLKFHPKD--HNVFL 344

Query: 398 AGMSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVW 457
            G    +I  WDM TG++ + Y   +     I F+     F++S+D       D+++  W
Sbjct: 345 CGGFSSEIKAWDMRTGKVVKGYKATIQQTLDILFLQEGSEFLSSTDASTRDSADRTIIAW 404

Query: 458 EFGIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGH 517
           +F     I        ++ PS+++HP      AQ+  N + ++S+   +++++++R+ GH
Sbjct: 405 DFRTAAKISNQIFHERYTCPSLALHPREPVFLAQTNGNYLALFSSVWPYRMSRRRRYEGH 464

Query: 518 IVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSK 577
            V GYA     SP G  +++G  +G+   + +++     TL+ H   C+G  +HP+  S 
Sbjct: 465 KVEGYAVGCECSPCGDLLVTGSADGRVLMFSFRTASRACTLQGHTQACLGTTYHPVLPSV 524

Query: 578 VATCGWDGLIKYW 581
           + TC W G IK W
Sbjct: 525 LGTCSWGGDIKIW 534

[Close]
BLAST of CmoCh04G018120 vs. TrEMBL
Match: E5GBJ7_CUCME (Pre-mRNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 565/580 (97.41%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDLLQSYTDQND+DGSP+Q+ SSPEASPPRL+P+KTSAPKVDDT+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh04G018120 vs. TrEMBL
Match: A0A0A0KQ97_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601580 PE=4 SV=1)

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 564/580 (97.24%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDLLQSYTDQND+DGSP+Q+ SSPEASPPRLLP+KTSAPKVDDT+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh04G018120 vs. TrEMBL
Match: A0A067JRQ5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17735 PE=4 SV=1)

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 518/585 (88.55%), Postives = 551/585 (94.19%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVA--SSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLS 60
           MDLL+ Y D +DE G  ++    SSP++SPPRLLPAK++APKVDDT+LALTVA AN+TLS
Sbjct: 1   MDLLRGYKD-DDELGEHDRQNPNSSPDSSPPRLLPAKSTAPKVDDTMLALTVAQANKTLS 60

Query: 61  KPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQ 120
           KPIDP  H VAFNPTYDQLWAPIYGP+HP+AKDGIAQGMRNHKLGFVEDA+I+ FVFDEQ
Sbjct: 61  KPIDPVNHAVAFNPTYDQLWAPIYGPAHPFAKDGIAQGMRNHKLGFVEDAAIDSFVFDEQ 120

Query: 121 YNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE--N 180
           YNTFHKYGYAADPSAS GNNYIGD++AL+KND ISVYNIPQHEQK+RK EKKKE  E  +
Sbjct: 121 YNTFHKYGYAADPSASEGNNYIGDLDALKKNDGISVYNIPQHEQKRRKFEKKKETEEGED 180

Query: 181 EDVEEDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEE-K 240
           EDV   ++ AE++NPA+D WLMKNRKSPW+GKKEGL+TELTEEQKKYAEEYAKKK E+  
Sbjct: 181 EDVGPVVDKAEIENPATDAWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEYAKKKEEKGA 240

Query: 241 GSEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA 300
           G+++GEV ADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA
Sbjct: 241 GADRGEVVADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA 300

Query: 301 IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYD 360
           IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAGYD
Sbjct: 301 IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYD 360

Query: 361 KKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQE 420
           K IKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQE
Sbjct: 361 KNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQE 420

Query: 421 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNT 480
           YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI+VHPNT
Sbjct: 421 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIAVHPNT 480

Query: 481 NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 540
           NW AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW
Sbjct: 481 NWFAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 540

Query: 541 FWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           FWDWKSCKVFRTLKCHEGVCIGCEWHP EQSKVATCGWDGLIKYW
Sbjct: 541 FWDWKSCKVFRTLKCHEGVCIGCEWHPFEQSKVATCGWDGLIKYW 584

[Close]
BLAST of CmoCh04G018120 vs. TrEMBL
Match: A0A061GY62_THECC (Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_039496 PE=4 SV=1)

HSP 1 Score: 1073.9 bits (2776), Expect = 6.5e-311
Identity = 517/587 (88.07%), Postives = 548/587 (93.36%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVA-SSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSK 60
           MDLLQ+Y D +D D    Q + SSP++SPPRL+P+K++APKVDDT+LALT A  +Q  SK
Sbjct: 44  MDLLQTYADNSDSDDQNRQPSTSSPDSSPPRLIPSKSAAPKVDDTMLALTAAKTHQAHSK 103

Query: 61  PIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQY 120
           PIDPTQH+VAFNPTYDQLWAPIYGP+HPYAKDGIAQGMRNHKLGFVEDASIE FVFDEQY
Sbjct: 104 PIDPTQHVVAFNPTYDQLWAPIYGPAHPYAKDGIAQGMRNHKLGFVEDASIESFVFDEQY 163

Query: 121 NTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDV 180
           NTFHKYGYAADPS   GNNYIGD++ALQKNDAISVYNIPQHEQKKRKIEK+KEM   ED 
Sbjct: 164 NTFHKYGYAADPS---GNNYIGDLDALQKNDAISVYNIPQHEQKKRKIEKRKEMEVEEDE 223

Query: 181 ----EEDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEK 240
               E +++  E+DNPASDVWLMKN+ SPW+GKKEG++TELTEEQKKYAEEYAKKK EEK
Sbjct: 224 VVGGEGEVDPTEIDNPASDVWLMKNKTSPWAGKKEGVQTELTEEQKKYAEEYAKKK-EEK 283

Query: 241 G--SEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 300
           G   EKGE   DK+TFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV
Sbjct: 284 GHPGEKGEHVVDKTTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGV 343

Query: 301 SAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAG 360
           SAIRFFPK+GHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAG
Sbjct: 344 SAIRFFPKYGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAG 403

Query: 361 YDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQIT 420
           YDK IKYWDTETGQVISTFSTGKIPYVVKLNPD+DKQNILLAGMSDKKIVQWD+NTGQIT
Sbjct: 404 YDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDEDKQNILLAGMSDKKIVQWDINTGQIT 463

Query: 421 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHP 480
           QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS+HP
Sbjct: 464 QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISLHP 523

Query: 481 NTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 540
           NTNWLAAQSLDNQILIYSTR RFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK
Sbjct: 524 NTNWLAAQSLDNQILIYSTRARFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGK 583

Query: 541 CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 584 CWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 626

[Close]
BLAST of CmoCh04G018120 vs. TrEMBL
Match: M5Y4Q2_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003242mg PE=4 SV=1)

HSP 1 Score: 1072.8 bits (2773), Expect = 1.3e-310
Identity = 506/589 (85.91%), Postives = 551/589 (93.55%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDED-GSPEQ-------VASSPEASPPRLLPAKTSAPKVDDTLLALTVAN 60
           MDLL++Y+DQNDE+   PEQ         SSP+ASPPRLLPAK++AP VDDT+LALTVA+
Sbjct: 1   MDLLRAYSDQNDEELNEPEQQNLNPSSTTSSPDASPPRLLPAKSAAPNVDDTMLALTVAD 60

Query: 61  ANQTLSKPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEP 120
             ++LS+PIDPTQH+V FNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEP
Sbjct: 61  GQRSLSRPIDPTQHIVGFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEP 120

Query: 121 FVFDEQYNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKE 180
           FVFDEQYNTFHKYGYAADPSASAG NY+GD EALQKNDA+SVYNIPQHEQKKRKIEK+KE
Sbjct: 121 FVFDEQYNTFHKYGYAADPSASAGYNYVGDFEALQKNDAVSVYNIPQHEQKKRKIEKRKE 180

Query: 181 MSENEDVEEDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKG 240
           + E+E V++D++  EV NPASDVWLMKN+KSPW+GKK+G  TELTEEQKKYAEEYAKKKG
Sbjct: 181 LEEDEGVDDDMDPEEVQNPASDVWLMKNKKSPWAGKKDGPPTELTEEQKKYAEEYAKKKG 240

Query: 241 EEKGS-EKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTK 300
           EE+G  +KGEV  +K+TFHGKEERDYQGRSWIAPP+DAKA+NDHCYIPKRLVHTWSGHTK
Sbjct: 241 EERGGGDKGEVVVEKTTFHGKEERDYQGRSWIAPPRDAKASNDHCYIPKRLVHTWSGHTK 300

Query: 301 GVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLT 360
           GVSAIRFFP +GHLILSAGMDTKVKIWDVFN+GKCMRTYMGHS+AVRDI F NDGSKFLT
Sbjct: 301 GVSAIRFFPNYGHLILSAGMDTKVKIWDVFNTGKCMRTYMGHSKAVRDICFNNDGSKFLT 360

Query: 361 AGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQ 420
           A YDK IKYWDTETGQVISTFSTGK+PYVVKLNPD+DKQN+LLAGMSDKKIVQWDMN G+
Sbjct: 361 ASYDKNIKYWDTETGQVISTFSTGKVPYVVKLNPDEDKQNVLLAGMSDKKIVQWDMNEGK 420

Query: 421 ITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISV 480
           I QEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIS+
Sbjct: 421 INQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISL 480

Query: 481 HPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGE 540
           HPN+NWLAAQS+DNQILIYSTRE+FQLNKKKRFAGH+VAGYACQVNFSPDGRFVMSGDGE
Sbjct: 481 HPNSNWLAAQSMDNQILIYSTREKFQLNKKKRFAGHVVAGYACQVNFSPDGRFVMSGDGE 540

Query: 541 GKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           G+CWFWDWK+CKVFRTLKCHEGVCIG  WHPLEQSKVATCGWDGLIKYW
Sbjct: 541 GRCWFWDWKTCKVFRTLKCHEGVCIGAAWHPLEQSKVATCGWDGLIKYW 589

[Close]
BLAST of CmoCh04G018120 vs. TAIR10
Match: AT1G10580.1 (AT1G10580.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 995.7 bits (2573), Expect = 1.2e-290
Identity = 479/582 (82.30%), Postives = 524/582 (90.03%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDL+QSY +++      E VASSPE+SPPR+L AK+SAP+VDDT LALTVAN NQ+ SKP
Sbjct: 1   MDLIQSYEEED------EAVASSPESSPPRMLKAKSSAPEVDDTALALTVANVNQSKSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQH+V +NPT+DQLWAP++GP+HPYAKDGIAQGMRNHKLG VEDASI  F F+EQY+
Sbjct: 61  IDPTQHVVFYNPTHDQLWAPMFGPAHPYAKDGIAQGMRNHKLGSVEDASIGSFGFEEQYH 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHK GYAADPS   G NY+GD+EA +KND +SV+NIPQ EQK+RKIE+ KE  E E+ +
Sbjct: 121 TFHKCGYAADPS---GMNYVGDVEAFKKNDGLSVFNIPQSEQKRRKIERSKEEREGEEKK 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGE--EKGSE 240
           E++   E +NP ++ WL KNRKSPWS KKE ++ ELTEEQKKYAE++AKKK E  ++G  
Sbjct: 181 EEIE-PEAENPETEAWLRKNRKSPWSRKKEVVQGELTEEQKKYAEDHAKKKEEKGQQGET 240

Query: 241 KGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRF 300
           KGE  ADKSTFHGKEE+DYQGRSWI  PKDAKA NDHCYIPKRLVHTWSGHTKGVSAIRF
Sbjct: 241 KGEHYADKSTFHGKEEKDYQGRSWIEAPKDAKANNDHCYIPKRLVHTWSGHTKGVSAIRF 300

Query: 301 FPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKI 360
           FPK GHL+LSAGMD KVKIWDV+NSGKCMRTYMGH++AVRDI F NDGSKFLTAGYDK I
Sbjct: 301 FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNI 360

Query: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQ 420
           KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD+NTG++TQEYDQ
Sbjct: 361 KYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINTGEVTQEYDQ 420

Query: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWL 480
           HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPN NWL
Sbjct: 421 HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWL 480

Query: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540
           AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD
Sbjct: 481 AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWD 540

Query: 541 WKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           WKSCKVFRTLKCH GVCIG EWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 WKSCKVFRTLKCHNGVCIGAEWHPLEQSKVATCGWDGLIKYW 572

[Close]
BLAST of CmoCh04G018120 vs. TAIR10
Match: AT5G54520.1 (AT5G54520.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 207.6 bits (527), Expect = 2.1e-53
Identity = 103/308 (33.44%), Postives = 167/308 (54.22%), Query Frame = 1 

Query: 278 IPKRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVF-NSGKCMRTYMGHSQA 337
           +P R+  + +GHTK V+AI +   H HL+ SAG+D  V +W+V+ N  K +R ++ H+  
Sbjct: 148 MPSRMSISLTGHTKAVTAIDWSTSHVHLLASAGLDGAVYVWNVWSNDKKKVRAFLHHNAP 207

Query: 338 VRDISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAG 397
           V+D+ +   G   L+ GYD   + +D E G    +F   ++  VVK +PD+   N+ L+G
Sbjct: 208 VKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEVVGVVKFHPDNC--NVFLSG 267

Query: 398 MSDKKIVQWDMNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSD-------DKSLRVWEF 457
            S   +  WD+   +   EY + LG +  + F+   ++F++SSD       + ++ VW+ 
Sbjct: 268 GSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAGGKQFISSSDVSGRNISENAVIVWDI 327

Query: 458 GIPVVIKYISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIV 517
              V +        ++ P I  HP      AQS  N   I+ST   F+LNK KRF GH V
Sbjct: 328 SREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHGNYTAIFSTNPPFKLNKYKRFEGHWV 387

Query: 518 AGYACQVNFSPDGRFVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVA 577
           AG+  + NFSPDG  + SG  +G  + +D+KS  + + LK +E  C+   +HP+  + VA
Sbjct: 388 AGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTALIKKLKAYEQPCVNVSYHPVLPNVVA 447

[Close]
BLAST of CmoCh04G018120 vs. TAIR10
Match: AT2G43770.1 (AT2G43770.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 117.5 bits (293), Expect = 2.9e-26
Identity = 75/291 (25.77%), Postives = 127/291 (43.64%), Query Frame = 1 

Query: 287 SGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDG 346
           SGH   V  ++F P  G LI S   D ++ +W V    K      GH  A+ D+ + +DG
Sbjct: 50  SGHPSAVYTMKFNPA-GTLIASGSHDREIFLWRVHGDCKNFMVLKGHKNAILDLHWTSDG 109

Query: 347 SKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWD 406
           S+ ++A  DK ++ WD ETG+ I   +     +V    P      ++++G  D     WD
Sbjct: 110 SQIVSASPDKTVRAWDVETGKQIKKMAEHS-SFVNSCCPTRRGPPLIISGSDDGTAKLWD 169

Query: 407 MNTGQITQEYDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSM 466
           M      Q +      +  ++F D   +  T   D  ++VW+         + E H  ++
Sbjct: 170 MRQRGAIQTFPDKY-QITAVSFSDAADKIFTGGVDNDVKVWDLRKGEATMTL-EGHQDTI 229

Query: 467 PSISVHPNTNWLAAQSLDNQILIYSTRERFQLNK-KKRFAG--HIVAGYACQVNFSPDGR 526
             +S+ P+ ++L    +DN++ ++  R     N+  K F G  H       + ++SPDG 
Sbjct: 230 TGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGT 289

Query: 527 FVMSGDGEGKCWFWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWD 575
            V +G  +     WD  S +    L  H G    C +HP E   + +C  D
Sbjct: 290 KVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI-IGSCSSD 335

[Close]
BLAST of CmoCh04G018120 vs. TAIR10
Match: AT3G49660.1 (AT3G49660.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 115.9 bits (289), Expect = 8.4e-26
Identity = 61/218 (27.98%), Postives = 115/218 (52.75%), Query Frame = 1 

Query: 282 LVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDIS 341
           L+ T  GHT     + F P+  ++I+S   D  V+IWDV  +GKC++    HS  V  + 
Sbjct: 105 LIKTLIGHTNYAFCVNFNPQ-SNMIVSGSFDETVRIWDV-TTGKCLKVLPAHSDPVTAVD 164

Query: 342 FCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYV--VKLNPDDDKQNILLAGMSD 401
           F  DGS  +++ YD   + WD+ TG  + T    + P V  V+ +P+      +L G  D
Sbjct: 165 FNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSPNG---KFILVGTLD 224

Query: 402 KKIVQWDMNTGQITQEYDQHLGA---VNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIK 461
             +  W++++ +  + Y  H+ A   +++   V N +R V+ S+D  + +WE     +++
Sbjct: 225 NTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKKLLQ 284

Query: 462 YISEPHMHSMPSISVHPNTNWLAAQSLDNQILIYSTRE 495
            + E H  ++ +++ HP  N +A+ SLD  + I++ ++
Sbjct: 285 KL-EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316

[Close]
BLAST of CmoCh04G018120 vs. TAIR10
Match: AT5G08390.1 (AT5G08390.1 Transducin/WD40 repeat-like superfamily protein)

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-14
Identity = 41/127 (32.28%), Postives = 66/127 (51.97%), Query Frame = 1 

Query: 280 KRLVHTWSGHTKGVSAIRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRD 339
           K  +HT+ GHT+GV+ +RF P  G  I+S G D  VK+WD+  +GK +  +  H   ++ 
Sbjct: 133 KGCIHTYKGHTRGVNVLRFTPD-GRWIVSGGEDNVVKVWDL-TAGKLLHEFKSHEGKIQS 192

Query: 340 ISFCNDGSKFLTAGYDKKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSD 399
           + F        T   DK +K+WD ET ++I +  T +   V  L  + D +++L      
Sbjct: 193 LDFHPHEFLLATGSADKTVKFWDLETFELIGSGGT-ETTGVRCLTFNPDGKSVLCGLQES 252

Query: 400 KKIVQWD 407
            KI  W+
Sbjct: 253 LKIFSWE 256

[Close]
BLAST of CmoCh04G018120 vs. NCBI nr
Match: gi|659090806|ref|XP_008446212.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo])

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 565/580 (97.41%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDLLQSYTDQND+DGSP+Q+ SSPEASPPRL+P+KTSAPKVDDT+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh04G018120 vs. NCBI nr
Match: gi|659090804|ref|XP_008446211.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo])

HSP 1 Score: 1186.4 bits (3068), Expect = 0.0e+00
Identity = 565/580 (97.41%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDLLQSYTDQND+DGSP+Q+ SSPEASPPRL+P+KTSAPKVDDT+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLIPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh04G018120 vs. NCBI nr
Match: gi|449434919|ref|XP_004135243.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus])

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 564/580 (97.24%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDLLQSYTDQND+DGSP+Q+ SSPEASPPRLLP+KTSAPKVDDT+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh04G018120 vs. NCBI nr
Match: gi|778705063|ref|XP_011655627.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus])

HSP 1 Score: 1184.9 bits (3064), Expect = 0.0e+00
Identity = 564/580 (97.24%), Postives = 577/580 (99.48%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVASSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLSKP 60
           MDLLQSYTDQND+DGSP+Q+ SSPEASPPRLLP+KTSAPKVDDT+LALTVANANQTLSKP
Sbjct: 1   MDLLQSYTDQNDDDGSPKQLTSSPEASPPRLLPSKTSAPKVDDTMLALTVANANQTLSKP 60

Query: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQYN 120
           IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVE+ASIEPFVFDEQYN
Sbjct: 61  IDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVENASIEPFVFDEQYN 120

Query: 121 TFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSENEDVE 180
           TFHKYGYAADPSASAGNNYIGDMEAL+KNDAISVYNIPQHEQKKRKIEKKKEMSENED+E
Sbjct: 121 TFHKYGYAADPSASAGNNYIGDMEALEKNDAISVYNIPQHEQKKRKIEKKKEMSENEDME 180

Query: 181 EDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEEKGSEKG 240
           E++N AEVDNPASDVWLMKNRKSPWSGKKEGL+TELTEEQKKYAEEYAKKKGEEKG EKG
Sbjct: 181 EEVNPAEVDNPASDVWLMKNRKSPWSGKKEGLQTELTEEQKKYAEEYAKKKGEEKGGEKG 240

Query: 241 EVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300
           EVT+DKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP
Sbjct: 241 EVTSDKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSAIRFFP 300

Query: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360
           KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY
Sbjct: 301 KHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYDKKIKY 360

Query: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420
           WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL
Sbjct: 361 WDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQEYDQHL 420

Query: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480
           GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA
Sbjct: 421 GAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNTNWLAA 480

Query: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540
           QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK
Sbjct: 481 QSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCWFWDWK 540

Query: 541 SCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           +CKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW
Sbjct: 541 TCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 580

[Close]
BLAST of CmoCh04G018120 vs. NCBI nr
Match: gi|802719134|ref|XP_012085365.1| (PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Jatropha curcas])

HSP 1 Score: 1080.9 bits (2794), Expect = 0.0e+00
Identity = 518/585 (88.55%), Postives = 551/585 (94.19%), Query Frame = 1 

Query: 1   MDLLQSYTDQNDEDGSPEQVA--SSPEASPPRLLPAKTSAPKVDDTLLALTVANANQTLS 60
           MDLL+ Y D +DE G  ++    SSP++SPPRLLPAK++APKVDDT+LALTVA AN+TLS
Sbjct: 1   MDLLRGYKD-DDELGEHDRQNPNSSPDSSPPRLLPAKSTAPKVDDTMLALTVAQANKTLS 60

Query: 61  KPIDPTQHLVAFNPTYDQLWAPIYGPSHPYAKDGIAQGMRNHKLGFVEDASIEPFVFDEQ 120
           KPIDP  H VAFNPTYDQLWAPIYGP+HP+AKDGIAQGMRNHKLGFVEDA+I+ FVFDEQ
Sbjct: 61  KPIDPVNHAVAFNPTYDQLWAPIYGPAHPFAKDGIAQGMRNHKLGFVEDAAIDSFVFDEQ 120

Query: 121 YNTFHKYGYAADPSASAGNNYIGDMEALQKNDAISVYNIPQHEQKKRKIEKKKEMSE--N 180
           YNTFHKYGYAADPSAS GNNYIGD++AL+KND ISVYNIPQHEQK+RK EKKKE  E  +
Sbjct: 121 YNTFHKYGYAADPSASEGNNYIGDLDALKKNDGISVYNIPQHEQKRRKFEKKKETEEGED 180

Query: 181 EDVEEDLNLAEVDNPASDVWLMKNRKSPWSGKKEGLETELTEEQKKYAEEYAKKKGEE-K 240
           EDV   ++ AE++NPA+D WLMKNRKSPW+GKKEGL+TELTEEQKKYAEEYAKKK E+  
Sbjct: 181 EDVGPVVDKAEIENPATDAWLMKNRKSPWAGKKEGLQTELTEEQKKYAEEYAKKKEEKGA 240

Query: 241 GSEKGEVTADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA 300
           G+++GEV ADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA
Sbjct: 241 GADRGEVVADKSTFHGKEERDYQGRSWIAPPKDAKATNDHCYIPKRLVHTWSGHTKGVSA 300

Query: 301 IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSQAVRDISFCNDGSKFLTAGYD 360
           IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHS+AVRDISFCNDG+KFLTAGYD
Sbjct: 301 IRFFPKHGHLILSAGMDTKVKIWDVFNSGKCMRTYMGHSKAVRDISFCNDGTKFLTAGYD 360

Query: 361 KKIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQE 420
           K IKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQE
Sbjct: 361 KNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDMNTGQITQE 420

Query: 421 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNT 480
           YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSI+VHPNT
Sbjct: 421 YDQHLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYISEPHMHSMPSIAVHPNT 480

Query: 481 NWLAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 540
           NW AAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW
Sbjct: 481 NWFAAQSLDNQILIYSTRERFQLNKKKRFAGHIVAGYACQVNFSPDGRFVMSGDGEGKCW 540

Query: 541 FWDWKSCKVFRTLKCHEGVCIGCEWHPLEQSKVATCGWDGLIKYW 581
           FWDWKSCKVFRTLKCHEGVCIGCEWHP EQSKVATCGWDGLIKYW
Sbjct: 541 FWDWKSCKVFRTLKCHEGVCIGCEWHPFEQSKVATCGWDGLIKYW 584

The following BLAST results are available for this feature:
BLAST of CmoCh04G018120 vs. Swiss-Prot
Match NameE-valueIdentityDescription
PRP17_MOUSE5.4e-15250.66Pre-mRNA-processing factor 17 OS=Mus musculus GN=Cdc40 PE=2 SV=1[more]
PRP17_HUMAN1.2e-15148.94Pre-mRNA-processing factor 17 OS=Homo sapiens GN=CDC40 PE=1 SV=1[more]
PRP17_SCHPO1.7e-10036.64Pre-mRNA-processing factor 17 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24... [more]
PRP17_YEAST1.4e-7031.22Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / ... [more]
WDR25_MOUSE8.4e-4430.03WD repeat-containing protein 25 OS=Mus musculus GN=Wdr25 PE=2 SV=1[more]
BLAST of CmoCh04G018120 vs. TrEMBL
Match NameE-valueIdentityDescription
E5GBJ7_CUCME0.0e+0097.41Pre-mRNA splicing factor OS=Cucumis melo subsp. melo PE=4 SV=1[more]
A0A0A0KQ97_CUCSA0.0e+0097.24Uncharacterized protein OS=Cucumis sativus GN=Csa_5G601580 PE=4 SV=1[more]
A0A067JRQ5_JATCU0.0e+0088.55Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17735 PE=4 SV=1[more]
A0A061GY62_THECC6.5e-31188.07Transducin/WD40 repeat-like superfamily protein OS=Theobroma cacao GN=TCM_039496... [more]
M5Y4Q2_PRUPE1.3e-31085.91Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003242mg PE=4 SV=1[more]
BLAST of CmoCh04G018120 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G10580.11.2e-29082.30 Transducin/WD40 repeat-like superfamily protein[more]
AT5G54520.12.1e-5333.44 Transducin/WD40 repeat-like superfamily protein[more]
AT2G43770.12.9e-2625.77 Transducin/WD40 repeat-like superfamily protein[more]
AT3G49660.18.4e-2627.98 Transducin/WD40 repeat-like superfamily protein[more]
AT5G08390.11.1e-1432.28 Transducin/WD40 repeat-like superfamily protein[more]
BLAST of CmoCh04G018120 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659090806|ref|XP_008446212.1|0.0e+0097.41PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis melo][more]
gi|659090804|ref|XP_008446211.1|0.0e+0097.41PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis melo][more]
gi|449434919|ref|XP_004135243.1|0.0e+0097.24PREDICTED: pre-mRNA-processing factor 17 isoform X2 [Cucumis sativus][more]
gi|778705063|ref|XP_011655627.1|0.0e+0097.24PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Cucumis sativus][more]
gi|802719134|ref|XP_012085365.1|0.0e+0088.55PREDICTED: pre-mRNA-processing factor 17 isoform X1 [Jatropha curcas][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR020472G-protein_beta_WD-40_rep
Vocabulary: Biological Process
TermDefinition
GO:0000398mRNA splicing, via spliceosome
Vocabulary: Cellular Component
TermDefinition
GO:0071013catalytic step 2 spliceosome
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000398 mRNA splicing, via spliceosome
biological_process GO:0015976 carbon utilization
biological_process GO:0006730 one-carbon metabolic process
cellular_component GO:0071013 catalytic step 2 spliceosome
molecular_function GO:0005515 protein binding
molecular_function GO:0004089 carbonate dehydratase activity
molecular_function GO:0008270 zinc ion binding
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G018120.1CmoCh04G018120.1mRNA


InterPro
Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatPFAMPF00400WD40coord: 281..319
score: 5.7E-6coord: 324..362
score: 6.7E-6coord: 410..447
score: 0.0011coord: 503..538
score: 0
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 279..319
score: 6.9E-9coord: 452..491
score: 10.0coord: 409..448
score: 2.6E-6coord: 541..581
score: 0.001coord: 497..538
score: 0.14coord: 365..406
score: 3.6coord: 323..362
score: 4.4
IPR001680WD40 repeatPROFILEPS50082WD_REPEATS_2coord: 286..320
score: 12.881coord: 330..371
score: 15.421coord: 416..448
score: 12
IPR015943WD40/YVTN repeat-like-containing domainGENE3DG3DSA:2.130.10.10coord: 278..580
score: 9.2E-74coord: 149..177
score: 9.2
IPR017986WD40-repeat-containing domainPROFILEPS50294WD_REPEATS_REGIONcoord: 286..590
score: 42
IPR017986WD40-repeat-containing domainunknownSSF50978WD40 repeat-likecoord: 277..580
score: 1.56
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 306..320
scor
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 349..363
score: 5.3E-5coord: 306..320
score: 5.3E-5coord: 435..449
score: 5.
NoneNo IPR availableunknownCoilCoilcoord: 209..229
score: -coord: 157..189
scor
NoneNo IPR availablePANTHERPTHR22847WD40 REPEAT PROTEINcoord: 54..580
score: 3.8E

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CmoCh04G018120Cucsa.286030Cucumber (Gy14) v1cgycmoB0794
CmoCh04G018120CmaCh18G008000Cucurbita maxima (Rimu)cmacmoB422
CmoCh04G018120CmaCh04G017290Cucurbita maxima (Rimu)cmacmoB728
CmoCh04G018120Cla010088Watermelon (97103) v1cmowmB694
CmoCh04G018120Csa5G601580Cucumber (Chinese Long) v2cmocuB739
CmoCh04G018120MELO3C011999Melon (DHL92) v3.5.1cmomeB632
CmoCh04G018120ClCG05G025310Watermelon (Charleston Gray)cmowcgB655
CmoCh04G018120CSPI05G22710Wild cucumber (PI 183967)cmocpiB748
CmoCh04G018120Lsi04G005460Bottle gourd (USVL1VR-Ls)cmolsiB661
CmoCh04G018120Cp4.1LG09g05060Cucurbita pepo (Zucchini)cmocpeB646
CmoCh04G018120Cp4.1LG01g15330Cucurbita pepo (Zucchini)cmocpeB673
CmoCh04G018120MELO3C011999.2Melon (DHL92) v3.6.1cmomedB721
CmoCh04G018120CsaV3_5G031590Cucumber (Chinese Long) v3cmocucB0875
CmoCh04G018120Cla97C05G107460Watermelon (97103) v2cmowmbB730
CmoCh04G018120Bhi07G001379Wax gourdcmowgoB0890
CmoCh04G018120CsGy5G022230Cucumber (Gy14) v2cgybcmoB653
CmoCh04G018120Carg14466Silver-seed gourdcarcmoB0985
CmoCh04G018120Carg14344Silver-seed gourdcarcmoB0343
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
CmoCh04G018120CmoCh18G008050Cucurbita moschata (Rifu)cmocmoB341
The following block(s) are covering this gene:
GeneOrganismBlock
CmoCh04G018120Silver-seed gourdcarcmoB0685
CmoCh04G018120Cucurbita moschata (Rifu)cmocmoB472
CmoCh04G018120Cucurbita maxima (Rimu)cmacmoB189
CmoCh04G018120Cucurbita maxima (Rimu)cmacmoB785
CmoCh04G018120Cucurbita pepo (Zucchini)cmocpeB656