CsaV3_5G017270 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G017270
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	LOW QUALITY PROTEIN: uncharacterized protein LOC103504140
Location	chr5 : 13862919 .. 13865325 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAGAAAAAAGAAACCCATTTTCCGAATCCCAATACTCTTTTTTTTTCCCCTTCTTTCTTGCCGTTGACTGACCGCTTCTAAAATCATCAAACTCTCTCTCTTTCTCTTTCTCTGTCTCTGCCTTTTTCTTTTTTGAAAAAACAAAAATTTAATATATAAACCCATTTTTGAAAACGGGAGATACAGTTTGTTTTTCAAAATTATCGAAAATGAGTTGCAGCAGTGGTAGTGAACTTCATTCTCTACCTTTTCTCAATTCCTCACCCTTGGGTTTTGCAATTATGGAGGGCGCCGCCGCCGTCATTGATCCGTGTTTCTCACCCGCGATTTCCACCGGTTATTTAGAAGATGCGTTGGTTGAATACACTTCAAAACGACGGCGTTTGGATGATCATGATCAACATCATTTTTTTCATTTTCAATTCCCACAAACCTCTTATGATTATTGGAACAACCAAATTGATGATATTAATAATGATTATTATTATTATTATAATTACCACGCCATTTCTACAGGTGGGTTTTTTCTTACGCCATTATATTATTCCTCATTAAGCTTGTTTTACAATTTGCAAATGTTTGAGTTGGAATTAAATTGAATGAAACAGAATTTGGGGTTCTAAATTTTTGTTCAATTAGCAGATGAGGGAATAAGCAGTTCGCCCAAAAGCAGATTGAGTAATGAGGAAACGAGTATGGAGGATATGATGAAAACGCAAGATGTGGAGACCTATTCGACTCCAAATTATTATTATGAACATCCCCATCCTCATCACCATCACCATCATCCAAATTCTTCTTCTTCATCTTCTTCTAAATCACACAAATTTGAGGCTGATCAAAAATCCATTTTCTCCATGTCCACCAACCTCCCTATTTCAACAGGTTTTTTTTCCTTTTTCTCTTACTTTATTTTCTTTCTTTATATATATATATATATATATTTATTAAAAGAAAGCTATGGGCAATTGTGTGTATAAGTAATTATAAACATAAAAGACGATTTTTGTGGGGCACATATATATATATATATGGGCCTCTCTAAGAAAATGATTTTCTAATAATTTTCATTGTTCATTTTTCAAATTTACTAGCCTTAAAATAACAATACTAAAAAGCAAAGAAGAGAAAGGAATTATCTTTTCTTTTTTTTTTTTTTGTAGAATTTAAAAACTATATACAAATGTCAAAAAAATTATAATTTTTAAATTTATTCCTTCTTAAATTAAAACTTTAGTCATTTAACTTATTTTGTATTTATTTGTTTTTCTAAAAGTTTAAATTTATAAATTTATAAATTTAATCTCTCTAACCTTTTAATTTCTTTTGACGTGATATATATTATAATTAGACACAAAATTAAGATAAATTAATTCTAAGATTTTAAAATTTATCAAGAACTAATTATATTTAGAAATTTTGTTAAACTTGTTTGGAAGCTGATCTCATGTACAAAAAAAAAAAAAAAATACAAGCAAAGACTAAACTTAAATTTTAATGTTTTAATTATTTTAAAGACAAAAACTACTTAAAATATTTATTATTATTTTACGCATATTTGTGATTTATCATCGTCTCTATGGTCGTTTATCAAATTTAAATAATTTGGTTAATTTCATTATATTTAAAAACTAATACTTTTGAAAATTTAAAAAATGAAAAATTATATATTGGTGAAAAGGTAAAAGATGTAAACACTTGGCTTCTTTTTATAAAGAGTTTATATGGATGTAACTGTTGAGATATTAATTTTGATATGTATTCTTTTAAACAATCTCAGGTGATGGTGAAATTGAGCCAAAGAAGGCAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAAAAGATTTTAATGCCTCCAACACGCCCGGTTCGACACCCGGTCGGGGATTTTGCATGTCGACCATGCGTGTCTGCTGATGGACCGGGCCTATCGGGCAAAGCTGTGGTCGCATTGACCAAAATTCATACCCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGCTAATACTGATAGTTAACCCTAAATATGTATTACTATTTCAAATTAGTCTTTTAGATTGTTCTAAAACTTTTATCAATTGGCTTTGGCCTCCTTGAATTGTACAGAGGGAGAGAGGGGAAAATGGATGTAATATAATTAGCATCGGGAGACGAAGGGGAAAAAAGAGGTCAATCACTTTGTACTTGTATCATAGTTTTCTATTAAAGAAAACCTAAGTAATTACTAAAGTTTCATTTACTAATTATTTGATCTTTTATTTTTCATTTTTAAAAATTAAACCTGCTAAGTTCTCTTCTATATATTTAGTATTTAGATTTGGATGACAAAAGAGAATTTAG

mRNA sequence

ATGAGTTGCAGCAGTGGTAGTGAACTTCATTCTCTACCTTTTCTCAATTCCTCACCCTTGGGTTTTGCAATTATGGAGGGCGCCGCCGCCGTCATTGATCCGTGTTTCTCACCCGCGATTTCCACCGGTTATTTAGAAGATGCGTTGGTTGAATACACTTCAAAACGACGGCGTTTGGATGATCATGATCAACATCATTTTTTTCATTTTCAATTCCCACAAACCTCTTATGATTATTGGAACAACCAAATTGATGATATTAATAATGATTATTATTATTATTATAATTACCACGCCATTTCTACAGATGAGGGAATAAGCAGTTCGCCCAAAAGCAGATTGAGTAATGAGGAAACGAGTATGGAGGATATGATGAAAACGCAAGATGTGGAGACCTATTCGACTCCAAATTATTATTATGAACATCCCCATCCTCATCACCATCACCATCATCCAAATTCTTCTTCTTCATCTTCTTCTAAATCACACAAATTTGAGGCTGATCAAAAATCCATTTTCTCCATGTCCACCAACCTCCCTATTTCAACAGGTGATGGTGAAATTGAGCCAAAGAAGGCAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAAAAGATTTTAATGCCTCCAACACGCCCGGTTCGACACCCGGTCGGGGATTTTGCATGTCGACCATGCGTGTCTGCTGATGGACCGGGCCTATCGGGCAAAGCTGTGGTCGCATTGACCAAAATTCATACCCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGCTAA

Coding sequence (CDS)

ATGAGTTGCAGCAGTGGTAGTGAACTTCATTCTCTACCTTTTCTCAATTCCTCACCCTTGGGTTTTGCAATTATGGAGGGCGCCGCCGCCGTCATTGATCCGTGTTTCTCACCCGCGATTTCCACCGGTTATTTAGAAGATGCGTTGGTTGAATACACTTCAAAACGACGGCGTTTGGATGATCATGATCAACATCATTTTTTTCATTTTCAATTCCCACAAACCTCTTATGATTATTGGAACAACCAAATTGATGATATTAATAATGATTATTATTATTATTATAATTACCACGCCATTTCTACAGATGAGGGAATAAGCAGTTCGCCCAAAAGCAGATTGAGTAATGAGGAAACGAGTATGGAGGATATGATGAAAACGCAAGATGTGGAGACCTATTCGACTCCAAATTATTATTATGAACATCCCCATCCTCATCACCATCACCATCATCCAAATTCTTCTTCTTCATCTTCTTCTAAATCACACAAATTTGAGGCTGATCAAAAATCCATTTTCTCCATGTCCACCAACCTCCCTATTTCAACAGGTGATGGTGAAATTGAGCCAAAGAAGGCAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAAAAGATTTTAATGCCTCCAACACGCCCGGTTCGACACCCGGTCGGGGATTTTGCATGTCGACCATGCGTGTCTGCTGATGGACCGGGCCTATCGGGCAAAGCTGTGGTCGCATTGACCAAAATTCATACCCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGCTAA

Protein sequence

MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHHFFHFQFPQTSYDYWNNQIDDINNDYYYYYNYHAISTDEGISSSPKSRLSNEETSMEDMMKTQDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSHKFEADQKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG

Homology

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BLAST of CsaV3_5G017270 vs. NCBI nr
Match: XP_004151416.1 (PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hypothetical protein Csa_5G099490 [Cucumis sativus])

HSP 1 Score: 466.8 bits (1200), Expect = 5.0e-128
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD 60
           MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD
Sbjct: 1   MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD 60

Query: 61  DHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKSRLSNEETS 120
           DHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKSRLSNEETS
Sbjct: 61  DHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKSRLSNEETS 120

Query: 121 MEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLP 180
           MEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLP
Sbjct: 121 MEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLP 180

Query: 181 ISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFAC 240
           ISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFAC
Sbjct: 181 ISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFAC 240

Query: 241 RPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           RPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 241 RPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

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BLAST of CsaV3_5G017270 vs. NCBI nr
Match: XP_008466833.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 [Cucumis melo])

HSP 1 Score: 332.4 bits (851), Expect = 1.5e-87
Identity = 204/252 (80.95%), Postives = 211/252 (83.73%), Query Frame = 0


Query: 27  GAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHHFFHFQFPQTSYDYWNNQIDD 86
           G AAVIDPCFSPAISTGYLEDAL+EYTSKRRRL DHDQHHFF+    +        ++  
Sbjct: 4   GGAAVIDPCFSPAISTGYLEDALLEYTSKRRRL-DHDQHHFFNLNSHKALTIIGTTKL-M 63

Query: 87  XXXXXXXXXXXHAISTDEGISSSPKSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXX 146
            X          AISTDEGISSSPKSRLSNEETSME +MKTQDVETYSTPN     XXXX
Sbjct: 64  IXIMIYYYYNYDAISTDEGISSSPKSRLSNEETSMEAIMKTQDVETYSTPN-----XXXX 123

Query: 147 XXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVK 206
           XXXXXXXXXXXXXXXX       KSIFSMSTNLPISTGDGEIE KKAKKRKVVYPFALVK
Sbjct: 124 XXXXXXXXXXXXXXXXHKFEADQKSIFSMSTNLPISTGDGEIETKKAKKRKVVYPFALVK 183

Query: 207 PGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG 266
           PGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG
Sbjct: 184 PGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG 243

Query: 267 RRGTITIIRTKG 279
           RRGTITIIRTKG
Sbjct: 244 RRGTITIIRTKG 248

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BLAST of CsaV3_5G017270 vs. NCBI nr
Match: XP_022146436.1 (uncharacterized protein LOC111015652 [Momordica charantia])

HSP 1 Score: 277.7 bits (709), Expect = 4.3e-71
Identity = 168/291 (57.73%), Postives = 191/291 (65.64%), Query Frame = 0


Query: 7   SELHSLPFLNSSPLGFAIMEGA----AAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDH 66
           S+LHSL    SSPL FA+M+ A    A  +DPCFSP +STGYLEDALVE+TSKRRRL  +
Sbjct: 3   SDLHSL----SSPLAFAVMDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLN 62

Query: 67  DQHH----FFHFQFPQ---TSYDYWNNQID------DXXXXXXXXXXXHAISTDEGISSS 126
           D  H       FQFPQ   +SY  W    D      D            A+S DE IS+S
Sbjct: 63  DHIHNNNLVDQFQFPQSYWSSYCTWGADADNASDTFDWTNQIYDFNNYDAVSADELISTS 122

Query: 127 PKSRLSNEETSMEDM--MKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186
           PKSR+S EET+  D+  MKT +VE +STPNY                             
Sbjct: 123 PKSRIS-EETNYTDVSAMKTPEVEAFSTPNY----NNYCYEHPNSSSSSSKHQFHAEFLA 182

Query: 187 XXKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP 246
             ++I S+S  LP+S+G G  E K  KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPP
Sbjct: 183 DKQTILSLSRKLPLSSGGGS-ETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPP 242

Query: 247 TRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           TRPVRHPVGDFACRPCVSADGPGLSGKAVVALT+IHTQGRRG+ITIIRTKG
Sbjct: 243 TRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQGRRGSITIIRTKG 283

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BLAST of CsaV3_5G017270 vs. NCBI nr
Match: XP_022992584.1 (uncharacterized protein LOC111488886 [Cucurbita maxima])

HSP 1 Score: 238.0 bits (606), Expect = 3.8e-59
Identity = 148/291 (50.86%), Postives = 168/291 (57.73%), Query Frame = 0


Query: 4   SSGSELHSLPFLNSSPLGFAIME--GAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDD 63
           S GSELHSL   NSSPLG A+M+   AAA +D  F PAISTGYLEDALV+Y SKRRRL  
Sbjct: 2   SGGSELHSLSLFNSSPLGIAVMDAAAAAAALDSSFMPAISTGYLEDALVDYNSKRRRLG- 61

Query: 64  HDQHHFFHFQFPQ--------------TSYDYWNNQIDDXXXXXXXXXXXHAISTDEGIS 123
              HH   F+FPQ               S+D+ NN+IDD               T+EGIS
Sbjct: 62  ---HHLLEFEFPQRYWSSFCTWGGDALESFDWNNNKIDDMNNF-----------TEEGIS 121

Query: 124 SSPKSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           +SPKSR+              D+E +STPN                              
Sbjct: 122 TSPKSRV---------FKTPPDMEPFSTPN------------------------------ 181

Query: 184 XXKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP 243
                         S G G     + KKRKVVYPFALVKPGGVEGD+TLNDIN+K+LMPP
Sbjct: 182 -------------SSAGSG----SERKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPP 221

Query: 244 TRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           TR VRHPVGDFACRP V+A+G GLSGKAVV LTKIHTQGRRG+ITIIRTKG
Sbjct: 242 TRAVRHPVGDFACRPYVTAEGRGLSGKAVVTLTKIHTQGRRGSITIIRTKG 221

[Close]

BLAST of CsaV3_5G017270 vs. NCBI nr
Match: XP_022939391.1 (protein XRI1-like [Cucurbita moschata])

HSP 1 Score: 229.6 bits (584), Expect = 1.3e-56
Identity = 141/289 (48.79%), Postives = 163/289 (56.40%), Query Frame = 0


Query: 4   SSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHD 63
           S GSELHSL   +SSPLGFA+M+   A +D  F PAISTGYLEDALV+Y  KRRRL    
Sbjct: 2   SGGSELHSLSLFDSSPLGFAVMDATTAALDSSFMPAISTGYLEDALVDYNPKRRRLG--- 61

Query: 64  QHHFFHFQFPQ--------------TSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSS 123
            HH   F+FPQ               S+D+ NNQIDD               T+EGIS+S
Sbjct: 62  -HHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNF-----------TEEGISTS 121

Query: 124 PKSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           PK+R+         +    ++E +STPN                                
Sbjct: 122 PKNRV---------LKTPPEIEPFSTPN-------------------------------- 181

Query: 184 KSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTR 243
                       S G G           VVYPFALVKPGGVEGD+TLNDIN+K+LMPPTR
Sbjct: 182 -----------SSAGSG-XXXXXXXXXXVVYPFALVKPGGVEGDITLNDINKKMLMPPTR 222

Query: 244 PVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
            VRHPVGDFACRP V+A+G GLSGKAVVALTKIHTQGRRG+ITIIRTKG
Sbjct: 242 AVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 222

[Close]

BLAST of CsaV3_5G017270 vs. TAIR10
Match: AT1G14630.1 (unknown protein)

HSP 1 Score: 143.3 bits (360), Expect = 2.3e-34
Identity = 69/85 (81.18%), Postives = 76/85 (89.41%), Query Frame = 0


Query: 194 KKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSG 253
           +K++VVYPF +VKPGG E D+TLNDIN++ILMP  RPVRHPVGDFACRPCVSADGPGLSG
Sbjct: 143 EKKRVVYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSG 202

Query: 254 KAVVALTKIHTQGRRGTITIIRTKG 279
           KAVVA TKI T G RGTITIIRTKG
Sbjct: 203 KAVVAFTKIQTLG-RGTITIIRTKG 226

[Close]

BLAST of CsaV3_5G017270 vs. TAIR10
Match: AT2G01990.1 (unknown protein)

HSP 1 Score: 138.7 bits (348), Expect = 5.6e-33
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 0


Query: 197 KVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAV 256
           K+VYPF LVKPGG E D+TLNDIN++ILM P+RP+RHPVGDFA RPCVS  GPGLSGKAV
Sbjct: 133 KLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAV 192

Query: 257 VALTKIHTQGRRGTITIIRTKG 279
           VALTKI TQG RGTITIIRTKG
Sbjct: 193 VALTKIQTQG-RGTITIIRTKG 213

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BLAST of CsaV3_5G017270 vs. TAIR10
Match: AT5G48720.2 (x-ray induced transcript 1)

HSP 1 Score: 77.4 bits (189), Expect = 1.5e-14
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 198 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVV 257
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVV 285

Query: 258 ALTKIHTQGRRGTITIIRTKG 279
             TKI T+G +G+ITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of CsaV3_5G017270 vs. Swiss-Prot
Match: sp|Q6NLW5|XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 2.8e-13
Identity = 41/81 (50.62%), Postives = 50/81 (61.73%), Query Frame = 0


Query: 198 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVV 257
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQTSAFSGKPVV 285

Query: 258 ALTKIHTQGRRGTITIIRTKG 279
             TKI T+G +G+ITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

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BLAST of CsaV3_5G017270 vs. TrEMBL
Match: tr|A0A0A0KMV0|A0A0A0KMV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 466.8 bits (1200), Expect = 3.3e-128
Identity = 278/278 (100.00%), Postives = 278/278 (100.00%), Query Frame = 0


Query: 1   MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD 60
           MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD
Sbjct: 1   MSCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD 60

Query: 61  DHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKSRLSNEETS 120
           DHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKSRLSNEETS
Sbjct: 61  DHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKSRLSNEETS 120

Query: 121 MEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLP 180
           MEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLP
Sbjct: 121 MEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLP 180

Query: 181 ISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFAC 240
           ISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFAC
Sbjct: 181 ISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFAC 240

Query: 241 RPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           RPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 241 RPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]

BLAST of CsaV3_5G017270 vs. TrEMBL
Match: tr|A0A1S3CSB7|A0A1S3CSB7_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=3656 GN=LOC103504140 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 9.7e-88
Identity = 204/252 (80.95%), Postives = 211/252 (83.73%), Query Frame = 0


Query: 27  GAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHHFFHFQFPQTSYDYWNNQIDD 86
           G AAVIDPCFSPAISTGYLEDAL+EYTSKRRRL DHDQHHFF+    +        ++  
Sbjct: 4   GGAAVIDPCFSPAISTGYLEDALLEYTSKRRRL-DHDQHHFFNLNSHKALTIIGTTKL-M 63

Query: 87  XXXXXXXXXXXHAISTDEGISSSPKSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXX 146
            X          AISTDEGISSSPKSRLSNEETSME +MKTQDVETYSTPN     XXXX
Sbjct: 64  IXIMIYYYYNYDAISTDEGISSSPKSRLSNEETSMEAIMKTQDVETYSTPN-----XXXX 123

Query: 147 XXXXXXXXXXXXXXXXXXXXXXXKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVK 206
           XXXXXXXXXXXXXXXX       KSIFSMSTNLPISTGDGEIE KKAKKRKVVYPFALVK
Sbjct: 124 XXXXXXXXXXXXXXXXHKFEADQKSIFSMSTNLPISTGDGEIETKKAKKRKVVYPFALVK 183

Query: 207 PGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG 266
           PGGVEGD+TLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG
Sbjct: 184 PGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG 243

Query: 267 RRGTITIIRTKG 279
           RRGTITIIRTKG
Sbjct: 244 RRGTITIIRTKG 248

[Close]

BLAST of CsaV3_5G017270 vs. TrEMBL
Match: tr|A0A2C9U6H6|A0A2C9U6H6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G091300 PE=4 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 9.8e-48
Identity = 135/288 (46.88%), Postives = 161/288 (55.90%), Query Frame = 0


Query: 8   ELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPA---ISTGYLEDALVEYT--SKRRRL--- 67
           +L +L  LN+  +   +M+G    + P FS      STGYLEDAL+E++  SKRRRL   
Sbjct: 20  DLQNLGLLNADTMSL-VMDG----VSPFFSSLESDFSTGYLEDALLEFSERSKRRRLLLY 79

Query: 68  -DDH----DQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSP---- 127
            DDH    D HHF        +  YWN    +           H  S+  G+S  P    
Sbjct: 80  TDDHTKISDDHHF--------AKSYWNENC-EWEMSENLSCMRHLTSSIHGVSEEPISTS 139

Query: 128 KSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 187
            S +S EE ++   MKT + E  +TP                                 K
Sbjct: 140 LSNMSEEEANVITEMKTPEEEIAATPE-----------------ILDSSSSSFKNSAKRK 199

Query: 188 SIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRP 247
           SIF    N  +    GE + KK    +VVYPFALVKPGGVEGDMT+NDIN++ILMPPTRP
Sbjct: 200 SIFE---NDNLQDHSGEDKRKKRMITRVVYPFALVKPGGVEGDMTINDINERILMPPTRP 259

Query: 248 VRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           VRHPVGDFACRPCVSADGPGLSGKAVVALT+IHTQG RGTITIIRTKG
Sbjct: 260 VRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQG-RGTITIIRTKG 272

[Close]

BLAST of CsaV3_5G017270 vs. TrEMBL
Match: tr|A0A2C9U6L6|A0A2C9U6L6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G091300 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.7e-47
Identity = 135/287 (47.04%), Postives = 162/287 (56.45%), Query Frame = 0


Query: 8   ELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPA---ISTGYLEDALVEYT--SKRRRL--- 67
           +L +L  LN+  +   +M+G    + P FS      STGYLEDAL+E++  SKRRRL   
Sbjct: 20  DLQNLGLLNADTMSL-VMDG----VSPFFSSLESDFSTGYLEDALLEFSERSKRRRLLLY 79

Query: 68  -DDH----DQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGIS---SSPK 127
            DDH    D HHF        +  YWN    +           H  S+  G+S   S+  
Sbjct: 80  TDDHTKISDDHHF--------AKSYWNENC-EWEMSENLSCMRHLTSSIHGVSEPISTSL 139

Query: 128 SRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKS 187
           S +S EE ++   MKT + E  +TP                                 KS
Sbjct: 140 SNMSEEEANVITEMKTPEEEIAATPE-----------------ILDSSSSSFKNSAKRKS 199

Query: 188 IFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPV 247
           IF    N  +    GE + KK    +VVYPFALVKPGGVEGDMT+NDIN++ILMPPTRPV
Sbjct: 200 IFE---NDNLQDHSGEDKRKKRMITRVVYPFALVKPGGVEGDMTINDINERILMPPTRPV 259

Query: 248 RHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           RHPVGDFACRPCVSADGPGLSGKAVVALT+IHTQG RGTITIIRTKG
Sbjct: 260 RHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQG-RGTITIIRTKG 271

[Close]

BLAST of CsaV3_5G017270 vs. TrEMBL
Match: tr|A0A061EA44|A0A061EA44_THECC (Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011176 PE=4 SV=1)

HSP 1 Score: 190.7 bits (483), Expect = 4.6e-45
Identity = 130/286 (45.45%), Postives = 159/286 (55.59%), Query Frame = 0


Query: 2   SCSSGSELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYT--SKRRRL 61
           S S G +L +L  LN+      +M+G A    P      S+GYLEDAL+E++  SKRRRL
Sbjct: 16  SPSLGWDLQNLGVLNADM--SLVMDGTAPFF-PHLDSDFSSGYLEDALLEFSERSKRRRL 75

Query: 62  ---DDHDQHHFFHFQFPQTSYDYWNNQIDDXXXXXXXXXXXHAISTDEGISSSPKS-RLS 121
               DHDQ +         +  YWN+  +              I++  G+S  P S  +S
Sbjct: 76  LLCGDHDQTN----DLNDLAKSYWNSSCN--WGLSENFSCMSQITSINGVSDEPVSTSVS 135

Query: 122 NEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSIFSM 181
           +EE ++   +KT +     +P                                 KS F+ 
Sbjct: 136 SEEANIVTEIKTPEEAISGSPE-----------------ALDSSSSSYKGSVKTKSFFNK 195

Query: 182 STNL---PISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVR 241
            T     PIS+       KK    +VVYPFALVKPGG+EGDMTLNDIN++ILMPPTRPVR
Sbjct: 196 DTQFSTDPISSSGSNDRKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMPPTRPVR 255

Query: 242 HPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 279
           HPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG RGTITIIRTKG
Sbjct: 256 HPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG-RGTITIIRTKG 274

The following BLAST results are available for this feature:

BLAST of CsaV3_5G017270 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004151416.1	5.0e-128	100.00	PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hy...	[more]
XP_008466833.2	1.5e-87	80.95	PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 [Cucumis me...	[more]
XP_022146436.1	4.3e-71	57.73	uncharacterized protein LOC111015652 [Momordica charantia]	[more]
XP_022992584.1	3.8e-59	50.86	uncharacterized protein LOC111488886 [Cucurbita maxima]	[more]
XP_022939391.1	1.3e-56	48.79	protein XRI1-like [Cucurbita moschata]	[more]

BLAST of CsaV3_5G017270 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14630.1	2.3e-34	81.18	unknown protein	[more]
AT2G01990.1	5.6e-33	81.71	unknown protein	[more]
AT5G48720.2	1.5e-14	50.62	x-ray induced transcript 1	[more]

BLAST of CsaV3_5G017270 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NLW5\|XRI1_ARATH	2.8e-13	50.62	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of CsaV3_5G017270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMV0\|A0A0A0KMV0_CUCSA	3.3e-128	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1	[more]
tr\|A0A1S3CSB7\|A0A1S3CSB7_CUCME	9.7e-88	80.95	LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=365...	[more]
tr\|A0A2C9U6H6\|A0A2C9U6H6_MANES	9.8e-48	46.88	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G091300 PE=4 SV=...	[more]
tr\|A0A2C9U6L6\|A0A2C9U6L6_MANES	1.7e-47	47.04	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_17G091300 PE=4 SV=...	[more]
tr\|A0A061EA44\|A0A061EA44_THECC	4.6e-45	45.45	Uncharacterized protein OS=Theobroma cacao OX=3641 GN=TCM_011176 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0019530	taurine metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G017270.1	CsaV3_5G017270.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..167
None	No IPR available	PANTHER	PTHR33385	FAMILY NOT NAMED	coord: 4..278
None	No IPR available	PANTHER	PTHR33385:SF12	SUBFAMILY NOT NAMED	coord: 4..278

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G017270	CSPI05G02030	Wild cucumber (PI 183967)	cpicucB287
CsaV3_5G017270	Cucsa.026480	Cucumber (Gy14) v1	cgycucB583
CsaV3_5G017270	CmaCh15G008750	Cucurbita maxima (Rimu)	cmacucB0356
CsaV3_5G017270	CmaCh04G021550	Cucurbita maxima (Rimu)	cmacucB0864
CsaV3_5G017270	CmoCh15G009100	Cucurbita moschata (Rifu)	cmocucB0351
CsaV3_5G017270	CmoCh04G022520	Cucurbita moschata (Rifu)	cmocucB0850
CsaV3_5G017270	Cp4.1LG13g06420	Cucurbita pepo (Zucchini)	cpecucB0213
CsaV3_5G017270	Cp4.1LG01g18730	Cucurbita pepo (Zucchini)	cpecucB0522
CsaV3_5G017270	CsGy5G012140	Cucumber (Gy14) v2	cgybcucB232
CsaV3_5G017270	Carg17697	Silver-seed gourd	carcucB0515
CsaV3_5G017270	Carg01332	Silver-seed gourd	carcucB0866
CsaV3_5G017270	Cla005829	Watermelon (97103) v1	cucwmB434
CsaV3_5G017270	MELO3C005226	Melon (DHL92) v3.5.1	cucmeB361
CsaV3_5G017270	ClCG01G006870	Watermelon (Charleston Gray)	cucwcgB386
CsaV3_5G017270	Lsi09G007290	Bottle gourd (USVL1VR-Ls)	cuclsiB346
CsaV3_5G017270	MELO3C005226.2	Melon (DHL92) v3.6.1	cucmedB353
CsaV3_5G017270	Cla97C01G007250	Watermelon (97103) v2	cucwmbB352
CsaV3_5G017270	Bhi12G000870	Wax gourd	cucwgoB450

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None