CmoCh04G022520 (gene) Cucurbita moschata (Rifu) | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CmoCh04G022520
Type	gene
Organism	Cucurbita moschata (Cucurbita moschata (Rifu))
Description	Protein XRI1
Location	Cmo_Chr04 : 16866801 .. 16868118 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTCACTAATTACGCCATGAATACTCTCACTGACCTTCACTCACTGCCGTTCTTCAACTCCGCCGTCCACCACCCATCTTCCCCGCCGCCGATTTCCACCGGCTACTTGGAAGATGCCTTCCTGGAATTCACTTCCAAACGACCCCGTTTCGATCACCATCTTCTTCAATTGGAATTCCCTCACACCTACTGGAGTTCCTGTTGCACGTGGGAAGGAGATGCCTTCAATTCCACCAACCAAATCCACCATATCAATCATAATTATGATTATTATTATTATGATACGGTTTCTCCAGGTGGGTTTTTTTTCTTTTTGGCTTTTTTTAATTGTTCATGGTGAAGCTTATTAAATGAACCAACTTTATTTGGAAACAAAAAAACAAACGTACGGTTTGTTGGGGTTGTTTTAATTGAATGAAACTGAATTGGGTTTTTTTCGTTTCGGGTTTTGGCTTGATTGAATGATTCAGATGAAATGTTCGGCGCGTCGCCAAAAAGCAGAATTAGCGATGAAACCAACACAGATCTATCCATGGGAGATATGAAAACGCCAGAAATTGAAGCGTTTTCTACTCCAAATGATTTCTATTATGAACATCAAGCCGATGCTGAGTTTTTGCCTTGCAAGCAGCCAATTTCAACAGGTTTTTTTTTTTTTTTTTTGTTGAGATTTTTCTATGAATTTGAGCTGATATGGGTATTGGGTATGCGTAATTATAATCAAAATACGATCTTGGTGGGGCAATTTGAATAATTTTCCAATAATTTTCCAATAATTTTGATGGGTTTATTTTAAAATTTATTTGGTTTGAATTGATTAGATGGTGGCAGTGTAACGAAGAGGCCCAAAAAGAGGAAAGTGGTGTATCCATTTGAGTTAGTGAAGCCCGGAGGCATCGACGGGGATATAACCTTAAACGACATAAACGAAAACATGTTGATGCCGCCGACACGGCCAGTCCGACACCCAGTTGGGGATTTCGCGTGTCGGCCGTGCGTGTCGGCGGAGGGACCGGGGCTGTCTGGGAAAGCCGTGGTGGCGCTGACCAAAATCCATACTCGAGGAAGGAGAGGGAGCATCACTATTATTAGAACCAGAGGCTAAACCCCCAAATATTGTACAGAGAGGAGAGAGAAAGAGGGAGAGAGGAGAGAGAAAATGTGTATTGTAATATAATATAATACAATGATTGAGGGATGGAAGGAGGTAATGAGTTTAAGGCTGCCTGTAATTGAGTTTTAATGAATGTTTTGGGTGTTTGGTCATTTACTCAAACATCACCACAGAAACGCAGTCTTTTTGGTCTGAATCTAAC

mRNA sequence

AATTTCACTAATTACGCCATGAATACTCTCACTGACCTTCACTCACTGCCGTTCTTCAACTCCGCCGTCCACCACCCATCTTCCCCGCCGCCGATTTCCACCGGCTACTTGGAAGATGCCTTCCTGGAATTCACTTCCAAACGACCCCGTTTCGATCACCATCTTCTTCAATTGGAATTCCCTCACACCTACTGGAGTTCCTGTTGCACGTGGGAAGGAGATGCCTTCAATTCCACCAACCAAATCCACCATATCAATCATAATTATGATTATTATTATTATGATACGGTTTCTCCAGATGAAATGTTCGGCGCGTCGCCAAAAAGCAGAATTAGCGATGAAACCAACACAGATCTATCCATGGGAGATATGAAAACGCCAGAAATTGAAGCGTTTTCTACTCCAAATGATTTCTATTATGAACATCAAGCCGATGCTGAGTTTTTGCCTTGCAAGCAGCCAATTTCAACAGATGGTGGCAGTGTAACGAAGAGGCCCAAAAAGAGGAAAGTGGTGTATCCATTTGAGTTAGTGAAGCCCGGAGGCATCGACGGGGATATAACCTTAAACGACATAAACGAAAACATGTTGATGCCGCCGACACGGCCAGTCCGACACCCAGTTGGGGATTTCGCGTGTCGGCCGTGCGTGTCGGCGGAGGGACCGGGGCTGTCTGGGAAAGCCGTGGTGGCGCTGACCAAAATCCATACTCGAGGAAGGAGAGGGAGCATCACTATTATTAGAACCAGAGGCTAAACCCCCAAATATTGTACAGAGAGGAGAGAGAAAGAGGGAGAGAGGAGAGAGAAAATGTGTATTGTAATATAATATAATACAATGATTGAGGGATGGAAGGAGGTAATGAGTTTAAGGCTGCCTGTAATTGAGTTTTAATGAATGTTTTGGGTGTTTGGTCATTTACTCAAACATCACCACAGAAACGCAGTCTTTTTGGTCTGAATCTAAC

Coding sequence (CDS)

ATGAATACTCTCACTGACCTTCACTCACTGCCGTTCTTCAACTCCGCCGTCCACCACCCATCTTCCCCGCCGCCGATTTCCACCGGCTACTTGGAAGATGCCTTCCTGGAATTCACTTCCAAACGACCCCGTTTCGATCACCATCTTCTTCAATTGGAATTCCCTCACACCTACTGGAGTTCCTGTTGCACGTGGGAAGGAGATGCCTTCAATTCCACCAACCAAATCCACCATATCAATCATAATTATGATTATTATTATTATGATACGGTTTCTCCAGATGAAATGTTCGGCGCGTCGCCAAAAAGCAGAATTAGCGATGAAACCAACACAGATCTATCCATGGGAGATATGAAAACGCCAGAAATTGAAGCGTTTTCTACTCCAAATGATTTCTATTATGAACATCAAGCCGATGCTGAGTTTTTGCCTTGCAAGCAGCCAATTTCAACAGATGGTGGCAGTGTAACGAAGAGGCCCAAAAAGAGGAAAGTGGTGTATCCATTTGAGTTAGTGAAGCCCGGAGGCATCGACGGGGATATAACCTTAAACGACATAAACGAAAACATGTTGATGCCGCCGACACGGCCAGTCCGACACCCAGTTGGGGATTTCGCGTGTCGGCCGTGCGTGTCGGCGGAGGGACCGGGGCTGTCTGGGAAAGCCGTGGTGGCGCTGACCAAAATCCATACTCGAGGAAGGAGAGGGAGCATCACTATTATTAGAACCAGAGGCTAA

Homology

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BLAST of CmoCh04G022520 vs. Swiss-Prot
Match: XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2)

HSP 1 Score: 70.5 bits (171), Expect = 2.9e-11
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1


Query: 156 VTKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEG 215
           V+K P    ++YPF  +KP G+ G +TL DIN+ +  PP +P  H        P V  + 
Sbjct: 219 VSKLPSS--IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQT 278

Query: 216 PGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
              SGK VV  TKI T G +GSITI+RTRG
Sbjct: 279 SAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of CmoCh04G022520 vs. TrEMBL
Match: A0A0A0KMV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 257.3 bits (656), Expect = 1.9e-65
Identity = 152/289 (52.60%), Postives = 183/289 (63.32%), Query Frame = 1


Query: 5   TDLHSLPFFNS------------AVHHPSSPPPISTGYLEDAFLEFTSKRPRFD----HH 64
           ++LHSLPF NS            AV  P   P ISTGYLEDA +E+TSKR R D    HH
Sbjct: 7   SELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHH 66

Query: 65  LLQLEFPHT---YWSSCCTWEGDAFNSTNQIHHINHNYDYYY-YDTVSPDEMFGASPKSR 124
               +FP T   YW+             NQI  IN++Y YYY Y  +S DE   +SPKSR
Sbjct: 67  FFHFQFPQTSYDYWN-------------NQIDDINNDYYYYYNYHAISTDEGISSSPKSR 126

Query: 125 ISDETNTDLSMGD-MKTPEIEAFSTPNDFYYEH-----------------------QADA 184
           +S+E   + SM D MKT ++E +STPN +YYEH                       +AD 
Sbjct: 127 LSNE---ETSMEDMMKTQDVETYSTPN-YYYEHPHPHHHHHHPNSSSSSSSKSHKFEADQ 186

Query: 185 E---FLPCKQPISTDGGSV-TKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTR 244
           +    +    PIST  G +  K+ KKRKVVYPF LVKPGG++GD+TLNDIN+ +LMPPTR
Sbjct: 187 KSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTR 246

Query: 245 PVRHPVGDFACRPCVSAEGPGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
           PVRHPVGDFACRPCVSA+GPGLSGKAVVALTKIHT+GRRG+ITIIRT+G
Sbjct: 247 PVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]

BLAST of CmoCh04G022520 vs. TrEMBL
Match: D7T8D7_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06580 PE=4 SV=1)

HSP 1 Score: 184.9 bits (468), Expect = 1.2e-43
Identity = 122/268 (45.52%), Postives = 156/268 (58.21%), Query Frame = 1


Query: 1   MNTLTDLHSLPFFNSAVHHPSSPPPISTGYLEDAFLEFT--SKRPRF----DHHLLQL-E 60
           M+ + D  + PFF+     PS      TGYL+DA +EF+  SKR R     DH      +
Sbjct: 35  MSLVMDNSTAPFFSCLDSDPS------TGYLQDALVEFSDRSKRRRLLLYTDHETNSPND 94

Query: 61  FPHTYWSSC--CTWE-GDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETN 120
              TYW+    CTW+  + FN  NQI  I           VS + + G++    IS+E  
Sbjct: 95  LMKTYWNMNPNCTWDLSENFNCMNQIASIGG---------VSAEPINGSAMSGMISEEEP 154

Query: 121 TDLSMGDMKTPE-----IEAFSTPNDFYYEHQADAEFLPCKQ--------PISTDGGSVT 180
           T     DMKTPE     +EA  + +  Y E+  + + +  K         P ST G    
Sbjct: 155 T---FADMKTPEETVSALEALDSSSSSYKEYSVNTKSVSEKDTLCSIDPLPPSTGGDHKK 214

Query: 181 KRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPG 240
           K+    +VVYPF +VKPGG+DGD+TLNDINE +LMPPTRPVRHPVGDFA RP VS +GPG
Sbjct: 215 KKKLITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRPFVSPDGPG 274

Query: 241 LSGKAVVALTKIHTRGRRGSITIIRTRG 246
           LSGKAVVALT+IHT+G RG+ITIIRT+G
Sbjct: 275 LSGKAVVALTRIHTQG-RGTITIIRTKG 283

[Close]

BLAST of CmoCh04G022520 vs. TrEMBL
Match: A5B1E5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004738 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 2.7e-43
Identity = 121/265 (45.66%), Postives = 154/265 (58.11%), Query Frame = 1


Query: 4   LTDLHSLPFFNSAVHHPSSPPPISTGYLEDAFLEFT--SKRPRF----DHHLLQL-EFPH 63
           + D  + PFF+     PS      TGYL+DA +EF+  SKR R     DH      +   
Sbjct: 196 IMDNSTAPFFSCLDSDPS------TGYLQDALVEFSDRSKRRRLLLYTDHETNSPNDLMK 255

Query: 64  TYWSSC--CTWE-GDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETNTDL 123
           TYW+    CTW+  + FN  NQI  I           VS + + G++    IS+E  T  
Sbjct: 256 TYWNMNPNCTWDLSENFNCMNQIASIGG---------VSAEPINGSAMSGMISEEEPT-- 315

Query: 124 SMGDMKTPE-----IEAFSTPNDFYYEHQADAEFLPCKQ--------PISTDGGSVTKRP 183
              DMKTPE     +EA  + +  Y E+  + + +  K         P ST G    K+ 
Sbjct: 316 -FADMKTPEETVSALEALDSSSSSYKEYSVNTKSVSEKDTLCSIDPLPPSTGGDHKKKKK 375

Query: 184 KKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSG 243
              +VVYPF +VKPGG+DGD+TLNDINE +LMPPTRPVRHPVGDFA RP VS +GPGLSG
Sbjct: 376 LITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRPFVSPDGPGLSG 435

Query: 244 KAVVALTKIHTRGRRGSITIIRTRG 246
           KAVVALT+IHT+G RG+ITIIRT+G
Sbjct: 436 KAVVALTRIHTQG-RGTITIIRTKG 441

[Close]

BLAST of CmoCh04G022520 vs. TrEMBL
Match: A0A061EA44_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011176 PE=4 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 3.8e-42
Identity = 122/261 (46.74%), Postives = 149/261 (57.09%), Query Frame = 1


Query: 9   SLPFFNSAVHHPSSPPPISTGYLEDAFLEFT--SKRPRF----DHHLLQ--LEFPHTYWS 68
           SL    +A   P      S+GYLEDA LEF+  SKR R     DH       +   +YW+
Sbjct: 34  SLVMDGTAPFFPHLDSDFSSGYLEDALLEFSERSKRRRLLLCGDHDQTNDLNDLAKSYWN 93

Query: 69  SCCTWE-GDAFNSTNQIHHINHNYDYYYYDTVS------------PDEMFGASPKSRISD 128
           S C W   + F+  +QI  IN   D     +VS            P+E    SP++  S 
Sbjct: 94  SSCNWGLSENFSCMSQITSINGVSDEPVSTSVSSEEANIVTEIKTPEEAISGSPEALDSS 153

Query: 129 ETNTDLSMGDMKTPEIEAFSTPNDFYYEHQADAEFLPCKQPISTDGGSVTKRPKKR---K 188
            ++     G +KT                  D +F     PIS+ G +   R KKR   +
Sbjct: 154 SSSYK---GSVKTKSF------------FNKDTQF--STDPISSSGSN--DRKKKRVITR 213

Query: 189 VVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSGKAVV 246
           VVYPF LVKPGGI+GD+TLNDINE +LMPPTRPVRHPVGDFACRPCVSA+GPGLSGKAVV
Sbjct: 214 VVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVV 273

[Close]

BLAST of CmoCh04G022520 vs. TrEMBL
Match: M5Y0J5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024837mg PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 1.5e-41
Identity = 118/256 (46.09%), Postives = 154/256 (60.16%), Query Frame = 1


Query: 20  PSSPPPI------STGYLEDAFLEFT--SKRPR--------FDHHLLQLE-FPHTYWSSC 79
           P   PP+      STGYLEDA LEF+  SKR R         +H          ++W+S 
Sbjct: 126 PCCSPPLVDQSDFSTGYLEDALLEFSEPSKRRRVLLYTDNEINHSATTTSVLEKSHWNS- 185

Query: 80  CTWE-GDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETNTDLSMG---DM 139
             WE  + F+   Q+   +          +  D +   +P SR+ +ETN    +    + 
Sbjct: 186 -HWEFSENFDCMTQLTSSSA------LSVLPGDPVSITTPISRVCEETNRVTKINTAEEA 245

Query: 140 KTPEIEAFSTPNDFYYEHQA---DAEFLPCKQPISTDGGSVT--KRPKK----RKVVYPF 199
             P  EA  + +   Y+  +   ++++LP + P +  GGS +  KR KK    RKVVYPF
Sbjct: 246 PMPAPEAIDSSSSSSYKEDSANTNSDYLPAR-PAAVVGGSSSDEKRRKKKGVIRKVVYPF 305

Query: 200 ELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSGKAVVALTKI 246
            LVKPGG++GDITLNDINE +LMPPTRPVRHPVGDFACRPCVSA+GPGLSGKAVVALT+I
Sbjct: 306 ALVKPGGVEGDITLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRI 365

[Close]

BLAST of CmoCh04G022520 vs. TAIR10
Match: AT1G14630.1 (AT1G14630.1 unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 79/167 (47.31%), Postives = 103/167 (61.68%), Query Frame = 1


Query: 95  EMFGASPKSRIS-----DETNTDLSMGDMKTPEIEAFSTPNDFYYEHQADAEFLPCKQPI 154
           E  G S + R+S     D+ + DL          E +S  +  + +   ++    C +  
Sbjct: 61  EFSGRSKRRRLSFNGAEDKPDNDLDHSQNHWGLSENYSCTSSQFADESPNSSINICSEEK 120

Query: 155 ST--------DGGSVTKR---PKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPV 214
           S+           S +K+    +K++VVYPF +VKPGG + DITLNDIN+ +LMP  RPV
Sbjct: 121 SSISSRNSFEPSSSTSKKNDYDEKKRVVYPFGVVKPGGREEDITLNDINKRILMPSARPV 180

Query: 215 RHPVGDFACRPCVSAEGPGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
           RHPVGDFACRPCVSA+GPGLSGKAVVA TKI T G RG+ITIIRT+G
Sbjct: 181 RHPVGDFACRPCVSADGPGLSGKAVVAFTKIQTLG-RGTITIIRTKG 226

[Close]

BLAST of CmoCh04G022520 vs. TAIR10
Match: AT2G01990.1 (AT2G01990.1 unknown protein)

HSP 1 Score: 136.3 bits (342), Expect = 2.5e-32
Identity = 93/221 (42.08%), Postives = 128/221 (57.92%), Query Frame = 1


Query: 26  ISTGYLEDAFLEFTSKRPRFDHHLLQLEFPHTYWSSCCTWEGDAFNSTNQIHHINHNYDY 85
           +STGYLEDA +E   +  R     L  E P   ++     + D+ N       ++ +Y  
Sbjct: 19  VSTGYLEDALIESGERSKR---RRLLFEDPSKSFN-----DDDSQNDWG----LHESYSC 78

Query: 86  YYYDTVSPDEMFGASPKSRISDETNTDLSMGDM-KTPEIEAFSTPNDFYYEHQADAEFLP 145
                V+P    G     RIS  +    ++ ++ ++P+     + +  Y   ++  E   
Sbjct: 79  LNSQFVTPHVNTG----ERISGVSYCQETISNVYESPDTSV--SYDKIYVREKSPTE--- 138

Query: 146 CKQPISTDGGSVTKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGD 205
              P S++ G+  KR    K+VYPF LVKPGG + D+TLNDINE +LM P+RP+RHPVGD
Sbjct: 139 ---PSSSNCGNKNKR-LITKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGD 198

Query: 206 FACRPCVSAEGPGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
           FA RPCVS  GPGLSGKAVVALTKI T+G RG+ITIIRT+G
Sbjct: 199 FASRPCVSGRGPGLSGKAVVALTKIQTQG-RGTITIIRTKG 213

[Close]

BLAST of CmoCh04G022520 vs. TAIR10
Match: AT5G48720.2 (AT5G48720.2 x-ray induced transcript 1)

HSP 1 Score: 70.5 bits (171), Expect = 1.7e-12
Identity = 40/90 (44.44%), Postives = 52/90 (57.78%), Query Frame = 1


Query: 156 VTKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEG 215
           V+K P    ++YPF  +KP G+ G +TL DIN+ +  PP +P  H        P V  + 
Sbjct: 219 VSKLPSS--IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAV-IQT 278

Query: 216 PGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
              SGK VV  TKI T G +GSITI+RTRG
Sbjct: 279 SAFSGKPVVGKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of CmoCh04G022520 vs. NCBI nr
Match: gi|449467410|ref|XP_004151416.1| (PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus])

HSP 1 Score: 257.3 bits (656), Expect = 2.7e-65
Identity = 152/289 (52.60%), Postives = 183/289 (63.32%), Query Frame = 1


Query: 5   TDLHSLPFFNS------------AVHHPSSPPPISTGYLEDAFLEFTSKRPRFD----HH 64
           ++LHSLPF NS            AV  P   P ISTGYLEDA +E+TSKR R D    HH
Sbjct: 7   SELHSLPFLNSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDHDQHH 66

Query: 65  LLQLEFPHT---YWSSCCTWEGDAFNSTNQIHHINHNYDYYY-YDTVSPDEMFGASPKSR 124
               +FP T   YW+             NQI  IN++Y YYY Y  +S DE   +SPKSR
Sbjct: 67  FFHFQFPQTSYDYWN-------------NQIDDINNDYYYYYNYHAISTDEGISSSPKSR 126

Query: 125 ISDETNTDLSMGD-MKTPEIEAFSTPNDFYYEH-----------------------QADA 184
           +S+E   + SM D MKT ++E +STPN +YYEH                       +AD 
Sbjct: 127 LSNE---ETSMEDMMKTQDVETYSTPN-YYYEHPHPHHHHHHPNSSSSSSSKSHKFEADQ 186

Query: 185 E---FLPCKQPISTDGGSV-TKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTR 244
           +    +    PIST  G +  K+ KKRKVVYPF LVKPGG++GD+TLNDIN+ +LMPPTR
Sbjct: 187 KSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTR 246

Query: 245 PVRHPVGDFACRPCVSAEGPGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
           PVRHPVGDFACRPCVSA+GPGLSGKAVVALTKIHT+GRRG+ITIIRT+G
Sbjct: 247 PVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]

BLAST of CmoCh04G022520 vs. NCBI nr
Match: gi|659072704|ref|XP_008466833.1| (PREDICTED: LOW QUALITY PROTEIN: protein roadkill-like [Cucumis melo])

HSP 1 Score: 245.0 bits (624), Expect = 1.4e-61
Identity = 145/276 (52.54%), Postives = 176/276 (63.77%), Query Frame = 1


Query: 5   TDLHSLPFFNS-------------AVHHPSSPPPISTGYLEDAFLEFTSKRPRFDHHLLQ 64
           ++LHSL F NS             AV  P   P ISTGYLEDA LE+TSKR R DH   Q
Sbjct: 7   SELHSLSFLNSSPLGFAIMEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHD--Q 66

Query: 65  LEFPHTYWSSCCTWEGDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETNT 124
             F +       T  G     T ++     NY YY YD +S DE   +SPKSR+S+E  +
Sbjct: 67  HHFFNLNSHKALTIIG-----TTKLMIXIMNYYYYNYDAISTDEGISSSPKSRLSNEETS 126

Query: 125 DLSMGDMKTPEIEAFSTPNDFYYEH------------------QADAEFL---PCKQPIS 184
             ++  MKT ++E +STPN +YYEH                  +AD + +       PIS
Sbjct: 127 MEAI--MKTQDVETYSTPN-YYYEHHHHHPNSSSSSSSKSHKFEADQKSIFSMSTNLPIS 186

Query: 185 TDGGSV-TKRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRP 244
           T  G + TK+ KKRKVVYPF LVKPGG++GD+TLNDIN+ +LMPPTRPVRHPVGDFACRP
Sbjct: 187 TGDGEIETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPVGDFACRP 246

Query: 245 CVSAEGPGLSGKAVVALTKIHTRGRRGSITIIRTRG 246
           CVSA+GPGLSGKAVVALTKIHT+GRRG+ITIIRT+G
Sbjct: 247 CVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 272

[Close]

BLAST of CmoCh04G022520 vs. NCBI nr
Match: gi|225424520|ref|XP_002281819.1| (PREDICTED: protein XRI1 isoform X1 [Vitis vinifera])

HSP 1 Score: 184.9 bits (468), Expect = 1.7e-43
Identity = 122/268 (45.52%), Postives = 156/268 (58.21%), Query Frame = 1


Query: 1   MNTLTDLHSLPFFNSAVHHPSSPPPISTGYLEDAFLEFT--SKRPRF----DHHLLQL-E 60
           M+ + D  + PFF+     PS      TGYL+DA +EF+  SKR R     DH      +
Sbjct: 35  MSLVMDNSTAPFFSCLDSDPS------TGYLQDALVEFSDRSKRRRLLLYTDHETNSPND 94

Query: 61  FPHTYWSSC--CTWE-GDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETN 120
              TYW+    CTW+  + FN  NQI  I           VS + + G++    IS+E  
Sbjct: 95  LMKTYWNMNPNCTWDLSENFNCMNQIASIGG---------VSAEPINGSAMSGMISEEEP 154

Query: 121 TDLSMGDMKTPE-----IEAFSTPNDFYYEHQADAEFLPCKQ--------PISTDGGSVT 180
           T     DMKTPE     +EA  + +  Y E+  + + +  K         P ST G    
Sbjct: 155 T---FADMKTPEETVSALEALDSSSSSYKEYSVNTKSVSEKDTLCSIDPLPPSTGGDHKK 214

Query: 181 KRPKKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPG 240
           K+    +VVYPF +VKPGG+DGD+TLNDINE +LMPPTRPVRHPVGDFA RP VS +GPG
Sbjct: 215 KKKLITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRPFVSPDGPG 274

Query: 241 LSGKAVVALTKIHTRGRRGSITIIRTRG 246
           LSGKAVVALT+IHT+G RG+ITIIRT+G
Sbjct: 275 LSGKAVVALTRIHTQG-RGTITIIRTKG 283

[Close]

BLAST of CmoCh04G022520 vs. NCBI nr
Match: gi|147787730|emb|CAN60832.1| (hypothetical protein VITISV_004738 [Vitis vinifera])

HSP 1 Score: 183.7 bits (465), Expect = 3.8e-43
Identity = 121/265 (45.66%), Postives = 154/265 (58.11%), Query Frame = 1


Query: 4   LTDLHSLPFFNSAVHHPSSPPPISTGYLEDAFLEFT--SKRPRF----DHHLLQL-EFPH 63
           + D  + PFF+     PS      TGYL+DA +EF+  SKR R     DH      +   
Sbjct: 196 IMDNSTAPFFSCLDSDPS------TGYLQDALVEFSDRSKRRRLLLYTDHETNSPNDLMK 255

Query: 64  TYWSSC--CTWE-GDAFNSTNQIHHINHNYDYYYYDTVSPDEMFGASPKSRISDETNTDL 123
           TYW+    CTW+  + FN  NQI  I           VS + + G++    IS+E  T  
Sbjct: 256 TYWNMNPNCTWDLSENFNCMNQIASIGG---------VSAEPINGSAMSGMISEEEPT-- 315

Query: 124 SMGDMKTPE-----IEAFSTPNDFYYEHQADAEFLPCKQ--------PISTDGGSVTKRP 183
              DMKTPE     +EA  + +  Y E+  + + +  K         P ST G    K+ 
Sbjct: 316 -FADMKTPEETVSALEALDSSSSSYKEYSVNTKSVSEKDTLCSIDPLPPSTGGDHKKKKK 375

Query: 184 KKRKVVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSG 243
              +VVYPF +VKPGG+DGD+TLNDINE +LMPPTRPVRHPVGDFA RP VS +GPGLSG
Sbjct: 376 LITRVVYPFAVVKPGGLDGDMTLNDINERILMPPTRPVRHPVGDFASRPFVSPDGPGLSG 435

Query: 244 KAVVALTKIHTRGRRGSITIIRTRG 246
           KAVVALT+IHT+G RG+ITIIRT+G
Sbjct: 436 KAVVALTRIHTQG-RGTITIIRTKG 441

[Close]

BLAST of CmoCh04G022520 vs. NCBI nr
Match: gi|590697298|ref|XP_007045400.1| (Uncharacterized protein TCM_011176 [Theobroma cacao])

HSP 1 Score: 179.9 bits (455), Expect = 5.5e-42
Identity = 122/261 (46.74%), Postives = 149/261 (57.09%), Query Frame = 1


Query: 9   SLPFFNSAVHHPSSPPPISTGYLEDAFLEFT--SKRPRF----DHHLLQ--LEFPHTYWS 68
           SL    +A   P      S+GYLEDA LEF+  SKR R     DH       +   +YW+
Sbjct: 34  SLVMDGTAPFFPHLDSDFSSGYLEDALLEFSERSKRRRLLLCGDHDQTNDLNDLAKSYWN 93

Query: 69  SCCTWE-GDAFNSTNQIHHINHNYDYYYYDTVS------------PDEMFGASPKSRISD 128
           S C W   + F+  +QI  IN   D     +VS            P+E    SP++  S 
Sbjct: 94  SSCNWGLSENFSCMSQITSINGVSDEPVSTSVSSEEANIVTEIKTPEEAISGSPEALDSS 153

Query: 129 ETNTDLSMGDMKTPEIEAFSTPNDFYYEHQADAEFLPCKQPISTDGGSVTKRPKKR---K 188
            ++     G +KT                  D +F     PIS+ G +   R KKR   +
Sbjct: 154 SSSYK---GSVKTKSF------------FNKDTQF--STDPISSSGSN--DRKKKRVITR 213

Query: 189 VVYPFELVKPGGIDGDITLNDINENMLMPPTRPVRHPVGDFACRPCVSAEGPGLSGKAVV 246
           VVYPF LVKPGGI+GD+TLNDINE +LMPPTRPVRHPVGDFACRPCVSA+GPGLSGKAVV
Sbjct: 214 VVYPFALVKPGGIEGDMTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVV 273

The following BLAST results are available for this feature:

BLAST of CmoCh04G022520 vs. Swiss-Prot


Match Name	E-value	Identity	Description
XRI1_ARATH	2.9e-11	44.44	Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2	[more]

BLAST of CmoCh04G022520 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KMV0_CUCSA	1.9e-65	52.60	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099490 PE=4 SV=1	[more]
D7T8D7_VITVI	1.2e-43	45.52	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_01s0011g06580 PE=4 SV=...	[more]
A5B1E5_VITVI	2.7e-43	45.66	Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_004738 PE=4 SV=1	[more]
A0A061EA44_THECC	3.8e-42	46.74	Uncharacterized protein OS=Theobroma cacao GN=TCM_011176 PE=4 SV=1	[more]
M5Y0J5_PRUPE	1.5e-41	46.09	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa024837mg PE=4 SV=1	[more]

BLAST of CmoCh04G022520 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14630.1	2.5e-32	47.31	unknown protein	[more]
AT2G01990.1	2.5e-32	42.08	unknown protein	[more]
AT5G48720.2	1.7e-12	44.44	x-ray induced transcript 1	[more]

BLAST of CmoCh04G022520 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449467410\|ref\|XP_004151416.1\|	2.7e-65	52.60	PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus]	[more]
gi\|659072704\|ref\|XP_008466833.1\|	1.4e-61	52.54	PREDICTED: LOW QUALITY PROTEIN: protein roadkill-like [Cucumis melo]	[more]
gi\|225424520\|ref\|XP_002281819.1\|	1.7e-43	45.52	PREDICTED: protein XRI1 isoform X1 [Vitis vinifera]	[more]
gi\|147787730\|emb\|CAN60832.1\|	3.8e-43	45.66	hypothetical protein VITISV_004738 [Vitis vinifera]	[more]
gi\|590697298\|ref\|XP_007045400.1\|	5.5e-42	46.74	Uncharacterized protein TCM_011176 [Theobroma cacao]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006522	alanine metabolic process
biological_process	GO:0006531	aspartate metabolic process
biological_process	GO:0019482	beta-alanine metabolic process
biological_process	GO:0006536	glutamate metabolic process
biological_process	GO:0019530	taurine metabolic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0004351	glutamate decarboxylase activity
molecular_function	GO:0030170	pyridoxal phosphate binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmoCh04G022520.1	CmoCh04G022520.1	mRNA

InterPro

Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33385	FAMILY NOT NAMED	coord: 164..245 score: 4.5
None	No IPR available	PANTHER	PTHR33385:SF5	SUBFAMILY NOT NAMED	coord: 164..245 score: 4.5

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CmoCh04G022520	Cucsa.026480	Cucumber (Gy14) v1	cgycmoB1061
CmoCh04G022520	CmaCh15G008750	Cucurbita maxima (Rimu)	cmacmoB309
CmoCh04G022520	CmaCh04G021550	Cucurbita maxima (Rimu)	cmacmoB729
CmoCh04G022520	Cla005829	Watermelon (97103) v1	cmowmB706
CmoCh04G022520	Csa5G099490	Cucumber (Chinese Long) v2	cmocuB719
CmoCh04G022520	MELO3C005226	Melon (DHL92) v3.5.1	cmomeB625
CmoCh04G022520	ClCG01G006870	Watermelon (Charleston Gray)	cmowcgB636
CmoCh04G022520	CSPI05G02030	Wild cucumber (PI 183967)	cmocpiB727
CmoCh04G022520	Lsi09G007290	Bottle gourd (USVL1VR-Ls)	cmolsiB610
CmoCh04G022520	Cp4.1LG13g06420	Cucurbita pepo (Zucchini)	cmocpeB657
CmoCh04G022520	Cp4.1LG01g18730	Cucurbita pepo (Zucchini)	cmocpeB673
CmoCh04G022520	MELO3C005226.2	Melon (DHL92) v3.6.1	cmomedB714
CmoCh04G022520	CsaV3_5G017270	Cucumber (Chinese Long) v3	cmocucB0850
CmoCh04G022520	Cla97C01G007250	Watermelon (97103) v2	cmowmbB676
CmoCh04G022520	Bhi12G000870	Wax gourd	cmowgoB0823
CmoCh04G022520	CsGy5G012140	Cucumber (Gy14) v2	cgybcmoB629
CmoCh04G022520	Carg01332	Silver-seed gourd	carcmoB1121
CmoCh04G022520	Carg17697	Silver-seed gourd	carcmoB0648

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CmoCh04G022520	CmoCh15G009100	Cucurbita moschata (Rifu)	cmocmoB262

The following block(s) are covering this gene:

None