Carg01332 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg01332
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	XRI1-like protein
Location	Cucurbita_argyrosperma_scaffold_004 : 268715 .. 269691 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTGGTGGTAGTGAACTTCACTCTCTATCTCTTTTCGATTCCTCGCCCTTGGGTTTTGCAGTTATGGATGCCGCCACCGCCGCCGCCGCCGCCCTGGACTCATCTTTCATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGATTACAATTCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGAGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGTGGGTTTTTCTTTTTTTCTTTTTTTAAATAATTCAATTTATAATTAAACAATTGAATTGGAACTGAATTGGGGTTTTGGTGTTCATTGGTTTAAAGCAGAGGAAGGAATAAGCACTTCGCCCAAAAACAGAGTCCTCAAAACGCCGCCGGAAATCGAACCGTTTTCCACTCCAAATTCCTCCGCAGGTCTTTTACCTTTTTTCTTTCCAACTTCCTCTCAAAAAATTTTTACAAACTCTCCACAAACGATGTGGTATCTCACAATTTACCTTTTCGGGACCCAGCGTCCTCGCGGGCACTCGTGGGATGTTACAAGAACGGTTAAAGAATTTGAAAGTTATTGGTTGTTTTGACTTAATTTGGGGGTATTGTTGAAATTGAGCAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGTTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCGTACGTAACGGCGGAGGGACGGGGTCTGTCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAA

mRNA sequence

ATGAGTGGTGGTAGTGAACTTCACTCTCTATCTCTTTTCGATTCCTCGCCCTTGGGTTTTGCAGTTATGGATGCCGCCACCGCCGCCGCCGCCGCCCTGGACTCATCTTTCATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGATTACAATTCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGAGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGTTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCGTACGTAACGGCGGAGGGACGGGGTCTGTCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAA

Coding sequence (CDS)

ATGAGTGGTGGTAGTGAACTTCACTCTCTATCTCTTTTCGATTCCTCGCCCTTGGGTTTTGCAGTTATGGATGCCGCCACCGCCGCCGCCGCCGCCCTGGACTCATCTTTCATGCCGGCGATTTCCACCGGATATTTGGAAGATGCGTTGGTTGATTACAATTCCAAACGACGGCGTTTGGGTCATCATCTTGTTGAATTCGAATTCCCACAGAGGTACTGGAGTTCATTTTGCACATGGGGTGGAGATGCCCTTGAGAGTTTCGATTGGAACAACAACCAAATTGATGATATGAATAATTTTACAGGGAGTGGAAGTGAAAGGAAGAAGAGGAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGAGTAGAAGGGGATATAACCTTAAACGACATAAACAAGAAGATGTTAATGCCTCCGACACGGGCGGTCCGACACCCGGTGGGGGATTTTGCGTGCCGGCCGTACGTAACGGCGGAGGGACGGGGTCTGTCCGGCAAAGCGGTGGTGGCGTTGACGAAAATCCATACTCAAGGAAGGAGAGGGAGCATCACCATTATCAGAACAAAGGGTTAA

Protein sequence

MSGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRLGHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG

Homology

[Close]

BLAST of Carg01332 vs. NCBI nr
Match: XP_022992584.1 (uncharacterized protein LOC111488886 [Cucurbita maxima])

HSP 1 Score: 356.7 bits (914), Expect = 5.1e-95
Identity = 187/225 (83.11%), Postives = 190/225 (84.44%), Query Frame = 0


Query: 1   MSGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLF+SSPLG AVMDAA AAAAALDSSFMPAISTGYLEDALVDYNSKRRRL
Sbjct: 1   MSGGSELHSLSLFNSSPLGIAVMDAA-AAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFT------------------ 120
           GHHL+EFEFPQRYWSSFCTWGGDALESFDWNNN+IDDMNNFT                  
Sbjct: 61  GHHLLEFEFPQRYWSSFCTWGGDALESFDWNNNKIDDMNNFTEEGISTSPKSRVFKTPPD 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSGSE   RKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 MEPFSTPNSSAGSGSE---RKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           PVGDFACRPYVTAEGRGLSGKAVV LTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVTLTKIHTQGRRGSITIIRTKG 221

[Close]

BLAST of Carg01332 vs. NCBI nr
Match: XP_023551058.1 (uncharacterized protein LOC111809001 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 347.8 bits (891), Expect = 2.4e-92
Identity = 179/225 (79.56%), Postives = 182/225 (80.89%), Query Frame = 0


Query: 1   MSGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLF+SSPLG AVMDAA  AAAALDSSFMPAISTGYLEDALVDYNSKRRRL
Sbjct: 1   MSGGSELHSLSLFNSSPLGIAVMDAAATAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTGSGSERKKRKK------- 120
           GHHLVEFEFPQRYWSSFCTWGGDAL SFDWNNNQIDDMNNFT  G     + +       
Sbjct: 61  GHHLVEFEFPQRYWSSFCTWGGDALASFDWNNNQIDDMNNFTEEGLSTSPKNRVLKTPPE 120

Query: 121 ----------------------RKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                                   VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 MEPFSTPNSSAGSXXXXXXXXXXXVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 225

[Close]

BLAST of Carg01332 vs. NCBI nr
Match: XP_022939391.1 (protein XRI1-like [Cucurbita moschata])

HSP 1 Score: 347.1 bits (889), Expect = 4.0e-92
Identity = 181/225 (80.44%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 1   MSGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRL 60
           MSGGSELHSLSLFDSSPLGFAVMDA T   AALDSSFMPAISTGYLEDALVDYN KRRRL
Sbjct: 1   MSGGSELHSLSLFDSSPLGFAVMDATT---AALDSSFMPAISTGYLEDALVDYNPKRRRL 60

Query: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFT------------------ 120
           GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFT                  
Sbjct: 61  GHHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDDMNNFTEEGISTSPKNRVLKTPPE 120

Query: 121 -----------GSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180
                      GSG          VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH
Sbjct: 121 IEPFSTPNSSAGSGXXXXXXXXXXVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRH 180

Query: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG
Sbjct: 181 PVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 222

[Close]

BLAST of Carg01332 vs. NCBI nr
Match: XP_022146436.1 (uncharacterized protein LOC111015652 [Momordica charantia])

HSP 1 Score: 238.0 bits (606), Expect = 2.6e-59
Identity = 147/286 (51.40%), Postives = 166/286 (58.04%), Query Frame = 0


Query: 5   SELHSLSLFDSSPLGFAVMDAATAA-AAALDSSFMPAISTGYLEDALVDYNSKRRRL--- 64
           S+LHSL    SSPL FAVMDAATAA A A+D  F P +STGYLEDALV++ SKRRRL   
Sbjct: 3   SDLHSL----SSPLAFAVMDAATAAVAVAVDPCFSPELSTGYLEDALVEFTSKRRRLLLN 62

Query: 65  ----GHHLV-EFEFPQRYWSSFCTWGGD---ALESFDWNNNQIDDMNNF----------- 124
                ++LV +F+FPQ YWSS+CTWG D   A ++FDW  NQI D NN+           
Sbjct: 63  DHIHNNNLVDQFQFPQSYWSSYCTWGADADNASDTFDW-TNQIYDFNNYDAVSADELIST 122

Query: 125 ------------------------------------------------------------ 184
                                                                       
Sbjct: 123 SPKSRISEETNYTDVSAMKTPEVEAFSTPNYNNYCYEHPNSSSSSSKHQFHAEFLADKQT 182

Query: 185 -----------TGSGSERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVR 197
                      +G GSE K  KKRKVVYPFALVKPGGVEGDITLNDIN+K+LMPPTR VR
Sbjct: 183 ILSLSRKLPLSSGGGSETKNLKKRKVVYPFALVKPGGVEGDITLNDINQKILMPPTRPVR 242

[Close]

BLAST of Carg01332 vs. NCBI nr
Match: XP_004151416.1 (PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hypothetical protein Csa_5G099490 [Cucumis sativus])

HSP 1 Score: 211.5 bits (537), Expect = 2.7e-51
Identity = 138/292 (47.26%), Postives = 154/292 (52.74%), Query Frame = 0


Query: 2   SGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRLG 61
           S GSELHSL   +SSPLGFA+M+    AAA +D  F PAISTGYLEDALV+Y SKRRRL 
Sbjct: 4   SSGSELHSLPFLNSSPLGFAIME---GAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD 63

Query: 62  ----HHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDD-------------------- 121
               HH   F+FPQ               S+D+ NNQIDD                    
Sbjct: 64  DHDQHHFFHFQFPQ--------------TSYDYWNNQIDDXXXXXXXXXXXHAISTDEGI 123

Query: 122 -------MNN-------------------------------------------------- 181
                  ++N                                                  
Sbjct: 124 SSSPKSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 182 ---------------FTGSGS-ERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMP 197
                           TG G  E KK KKRKVVYPFALVKPGGVEGD+TLNDIN+K+LMP
Sbjct: 184 XXXKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 243

[Close]

BLAST of Carg01332 vs. TAIR10
Match: AT1G14630.1 (unknown protein)

HSP 1 Score: 154.1 bits (388), Expect = 9.1e-38
Identity = 95/178 (53.37%), Postives = 116/178 (65.17%), Query Frame = 0


Query: 41  ISTGYLEDALVDYN--SKRRRLGHHLVE------FEFPQRYW----SSFCTWGGDALESF 100
           +STGYLEDAL++++  SKRRRL  +  E       +  Q +W    +  CT    A ES 
Sbjct: 50  VSTGYLEDALIEFSGRSKRRRLSFNGAEDKPDNDLDHSQNHWGLSENYSCTSSQFADESP 109

Query: 101 DWNNN-------QIDDMNNFTGSGSERKKR---KKRKVVYPFALVKPGGVEGDITLNDIN 160
           + + N        I   N+F  S S  KK    +K++VVYPF +VKPGG E DITLNDIN
Sbjct: 110 NSSINICSEEKSSISSRNSFEPSSSTSKKNDYDEKKRVVYPFGVVKPGGREEDITLNDIN 169

Query: 161 KKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           K++LMP  R VRHPVGDFACRP V+A+G GLSGKAVVA TKI T G RG+ITIIRTKG
Sbjct: 170 KRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVAFTKIQTLG-RGTITIIRTKG 226

[Close]

BLAST of Carg01332 vs. TAIR10
Match: AT2G01990.1 (unknown protein)

HSP 1 Score: 130.6 bits (327), Expect = 1.1e-30
Identity = 92/203 (45.32%), Postives = 111/203 (54.68%), Query Frame = 0


Query: 41  ISTGYLEDALVD--YNSKRRRLGHHLVEFEFPQRYWS---SFCTWGGDALESFDWNNNQI 100
           +STGYLEDAL++    SKRRRL      FE P + ++   S   WG    ES+   N+Q 
Sbjct: 19  VSTGYLEDALIESGERSKRRRL-----LFEDPSKSFNDDDSQNDWG--LHESYSCLNSQF 78

Query: 101 DDMNNFTG---SG---------------------------------------SERKKRKK 160
              +  TG   SG                                         + KR  
Sbjct: 79  VTPHVNTGERISGVSYCQETISNVYESPDTSVSYDKIYVREKSPTEPSSSNCGNKNKRLI 138

Query: 161 RKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKA 197
            K+VYPF LVKPGG E D+TLNDIN+++LM P+R +RHPVGDFA RP V+  G GLSGKA
Sbjct: 139 TKLVYPFGLVKPGGRENDVTLNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKA 198

[Close]

BLAST of Carg01332 vs. TAIR10
Match: AT5G48720.2 (x-ray induced transcript 1)

HSP 1 Score: 71.6 bits (174), Expect = 5.9e-13
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 116 VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVV 175
           ++YPFA +KP GV G +TL DIN+K+  PP +   H             +    SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH------IEEPAVIQTSAFSGKPVV 285

Query: 176 ALTKIHTQGRRGSITIIRTKG 197
             TKI T+G +GSITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of Carg01332 vs. Swiss-Prot
Match: sp|Q6NLW5|XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2)

HSP 1 Score: 71.6 bits (174), Expect = 1.1e-11
Identity = 36/81 (44.44%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 116 VVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKAVV 175
           ++YPFA +KP GV G +TL DIN+K+  PP +   H             +    SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH------IEEPAVIQTSAFSGKPVV 285

Query: 176 ALTKIHTQGRRGSITIIRTKG 197
             TKI T+G +GSITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

[Close]

BLAST of Carg01332 vs. TrEMBL
Match: tr|A0A0A0KMV0|A0A0A0KMV0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 138/292 (47.26%), Postives = 154/292 (52.74%), Query Frame = 0


Query: 2   SGGSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYNSKRRRLG 61
           S GSELHSL   +SSPLGFA+M+    AAA +D  F PAISTGYLEDALV+Y SKRRRL 
Sbjct: 4   SSGSELHSLPFLNSSPLGFAIME---GAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLD 63

Query: 62  ----HHLVEFEFPQRYWSSFCTWGGDALESFDWNNNQIDD-------------------- 121
               HH   F+FPQ               S+D+ NNQIDD                    
Sbjct: 64  DHDQHHFFHFQFPQ--------------TSYDYWNNQIDDXXXXXXXXXXXHAISTDEGI 123

Query: 122 -------MNN-------------------------------------------------- 181
                  ++N                                                  
Sbjct: 124 SSSPKSRLSNEETSMEDMMKTQDVETYSTPNYYXXXXXXXXXXXXXXXXXXXXXXXXXXX 183

Query: 182 ---------------FTGSGS-ERKKRKKRKVVYPFALVKPGGVEGDITLNDINKKMLMP 197
                           TG G  E KK KKRKVVYPFALVKPGGVEGD+TLNDIN+K+LMP
Sbjct: 184 XXXKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 243

[Close]

BLAST of Carg01332 vs. TrEMBL
Match: tr|A0A1S3CSB7|A0A1S3CSB7_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=3656 GN=LOC103504140 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40
Identity = 112/243 (46.09%), Postives = 127/243 (52.26%), Query Frame = 0


Query: 30  AAALDSSFMPAISTGYLEDALVDYNSKRRRLGHHLVEF-------------------EFP 89
           AA +D  F PAISTGYLEDAL++Y SKRRRL H    F                      
Sbjct: 6   AAVIDPCFSPAISTGYLEDALLEYTSKRRRLDHDQHHFFNLNSHKALTIIGTTKLMIXIM 65

Query: 90  QRYWSSFCTWGGD----------------------------------------------- 149
             Y+ ++     D                                               
Sbjct: 66  IYYYYNYDAISTDEGISSSPKSRLSNEETSMEAIMKTQDVETYSTPNXXXXXXXXXXXXX 125

Query: 150 -----ALESFDWNNNQIDDMNN----FTGSGS-ERKKRKKRKVVYPFALVKPGGVEGDIT 197
                    F+ +   I  M+      TG G  E KK KKRKVVYPFALVKPGGVEGD+T
Sbjct: 126 XXXXXXXHKFEADQKSIFSMSTNLPISTGDGEIETKKAKKRKVVYPFALVKPGGVEGDVT 185

[Close]

BLAST of Carg01332 vs. TrEMBL
Match: tr|A0A2K1ZH12|A0A2K1ZH12_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G140900v3 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-39
Identity = 105/210 (50.00%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 4   GSELHSLSLFDS------SPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYN--S 63
           G ELHS++ + S      S LG+   D  +      D S     STGYLEDAL+++N  S
Sbjct: 16  GFELHSMAYYKSIGGAGLSSLGW---DLQSLGVLRADMSLESDFSTGYLEDALLEFNEPS 75

Query: 64  KRRRLGHHLVEFEFPQRYWSSF--CTWGGDALESFDWNNNQIDDMNNFTG----SGSERK 123
           KRRRL     + +      +      W  +  + ++  +     M++ TG    S     
Sbjct: 76  KRRRLLLFATDHDDQSEKSNHLPESNWNEENFDDWELMSENFSCMSHITGFRGPSDDHEN 135

Query: 124 KRKKR---KVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEG 183
           KR+KR   +VVYPFALVKPGGVEGD+T+NDIN+++LMPPTR VRHPVGDFACRP V+A+G
Sbjct: 136 KRRKRVATRVVYPFALVKPGGVEGDMTINDINERILMPPTRPVRHPVGDFACRPCVSADG 195

Query: 184 RGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
            GLSGKAVVALT+IHTQG RG+ITIIRTKG
Sbjct: 196 PGLSGKAVVALTRIHTQG-RGTITIIRTKG 221

[Close]

BLAST of Carg01332 vs. TrEMBL
Match: tr|A0A2K1ZH21|A0A2K1ZH21_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G140900v3 PE=4 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 2.9e-38
Identity = 95/173 (54.91%), Postives = 119/173 (68.79%), Query Frame = 0


Query: 35  SSFMPAISTGYLEDALVDYN--SKRRRLGHHLVEFEFPQRYWSSF--CTWGGDALESFDW 94
           SS     STGYLEDAL+++N  SKRRRL     + +      +      W  +  + ++ 
Sbjct: 10  SSLESDFSTGYLEDALLEFNEPSKRRRLLLFATDHDDQSEKSNHLPESNWNEENFDDWEL 69

Query: 95  NNNQIDDMNNFTG----SGSERKKRKKR---KVVYPFALVKPGGVEGDITLNDINKKMLM 154
            +     M++ TG    S     KR+KR   +VVYPFALVKPGGVEGD+T+NDIN+++LM
Sbjct: 70  MSENFSCMSHITGFRGPSDDHENKRRKRVATRVVYPFALVKPGGVEGDMTINDINERILM 129

Query: 155 PPTRAVRHPVGDFACRPYVTAEGRGLSGKAVVALTKIHTQGRRGSITIIRTKG 197
           PPTR VRHPVGDFACRP V+A+G GLSGKAVVALT+IHTQG RG+ITIIRTKG
Sbjct: 130 PPTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTRIHTQG-RGTITIIRTKG 181

[Close]

BLAST of Carg01332 vs. TrEMBL
Match: tr|A0A2P4LRL9|A0A2P4LRL9_QUESU (Isoform 2 of protein xri1 OS=Quercus suber OX=58331 GN=CFP56_27502 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 8.4e-38
Identity = 108/263 (41.06%), Postives = 141/263 (53.61%), Query Frame = 0


Query: 4   GSELHSLSLFDSSPLGFAVMDAATAAAAALDSSFMPAISTGYLEDALVDYN--SKRRRL- 63
           G + H+L + ++  +   +  +A   +A L+S +    STGYLEDALV+++  SKRRRL 
Sbjct: 19  GWDFHNLGVLNADTMSLVMDGSAPFYSAPLESDY----STGYLEDALVEFSEMSKRRRLL 78

Query: 64  ------GHHLVEFEFPQRYWSSFCTWG----------------------GDALESFDWNN 123
                   H    +  + YW++ CTWG                        ++       
Sbjct: 79  LYTDDQTEHDGPEDLAKSYWNTNCTWGMSENVYSLSQINTMNGLSDGPMSTSMSGISEEA 138

Query: 124 NQIDD-------------------------------------MNNFTGSGSERKKRKK-- 183
           N I D                                     MN  +G G ++KKR++  
Sbjct: 139 NMITDVETPEEGPEATDSSSSSYKDLINTKSNNGENLFSISPMNPGSGDGEKKKKRERVI 198

Query: 184 RKVVYPFALVKPGGVEGDITLNDINKKMLMPPTRAVRHPVGDFACRPYVTAEGRGLSGKA 197
            +VVYPFALVKPGGVEGD+TLNDIN+++LMPPTR VRHPVGDFACRP V+  G GLSGKA
Sbjct: 199 TRVVYPFALVKPGGVEGDVTLNDINERILMPPTRPVRHPVGDFACRPCVSPHGPGLSGKA 258

The following BLAST results are available for this feature:

BLAST of Carg01332 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022992584.1	5.1e-95	83.11	uncharacterized protein LOC111488886 [Cucurbita maxima]	[more]
XP_023551058.1	2.4e-92	79.56	uncharacterized protein LOC111809001 [Cucurbita pepo subsp. pepo]	[more]
XP_022939391.1	4.0e-92	80.44	protein XRI1-like [Cucurbita moschata]	[more]
XP_022146436.1	2.6e-59	51.40	uncharacterized protein LOC111015652 [Momordica charantia]	[more]
XP_004151416.1	2.7e-51	47.26	PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus] >KGN49747.1 hy...	[more]

BLAST of Carg01332 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G14630.1	9.1e-38	53.37	unknown protein	[more]
AT2G01990.1	1.1e-30	45.32	unknown protein	[more]
AT5G48720.2	5.9e-13	44.44	x-ray induced transcript 1	[more]

BLAST of Carg01332 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NLW5\|XRI1_ARATH	1.1e-11	44.44	Protein XRI1 OS=Arabidopsis thaliana OX=3702 GN=XRI1 PE=1 SV=2	[more]

BLAST of Carg01332 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KMV0\|A0A0A0KMV0_CUCSA	1.8e-51	47.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G099490 PE=4 SV=1	[more]
tr\|A0A1S3CSB7\|A0A1S3CSB7_CUCME	1.8e-40	46.09	LOW QUALITY PROTEIN: uncharacterized protein LOC103504140 OS=Cucumis melo OX=365...	[more]
tr\|A0A2K1ZH12\|A0A2K1ZH12_POPTR	1.5e-39	50.00	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G140900v3 PE=...	[more]
tr\|A0A2K1ZH21\|A0A2K1ZH21_POPTR	2.9e-38	54.91	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_008G140900v3 PE=...	[more]
tr\|A0A2P4LRL9\|A0A2P4LRL9_QUESU	8.4e-38	41.06	Isoform 2 of protein xri1 OS=Quercus suber OX=58331 GN=CFP56_27502 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg01332-RA	Carg01332-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33385:SF12	SUBFAMILY NOT NAMED	coord: 99..196
None	No IPR available	PANTHER	PTHR33385	FAMILY NOT NAMED	coord: 99..196

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg01332	Cla005829	Watermelon (97103) v1	carwmB0830
Carg01332	Csa5G099490	Cucumber (Chinese Long) v2	carcuB0842
Carg01332	MELO3C005226	Melon (DHL92) v3.5.1	carmeB0821
Carg01332	ClCG01G006870	Watermelon (Charleston Gray)	carwcgB0800
Carg01332	CSPI05G02030	Wild cucumber (PI 183967)	carcpiB0862
Carg01332	Cucsa.026480	Cucumber (Gy14) v1	carcgyB0959
Carg01332	CmaCh04G021550	Cucurbita maxima (Rimu)	carcmaB1150
Carg01332	CmaCh15G008750	Cucurbita maxima (Rimu)	carcmaB1148
Carg01332	CmoCh04G022520	Cucurbita moschata (Rifu)	carcmoB1121
Carg01332	Lsi09G007290	Bottle gourd (USVL1VR-Ls)	carlsiB754
Carg01332	Cp4.1LG13g06420	Cucurbita pepo (Zucchini)	carcpeB1157
Carg01332	Cp4.1LG01g18730	Cucurbita pepo (Zucchini)	carcpeB1158
Carg01332	CsGy5G012140	Cucumber (Gy14) v2	carcgybB0817
Carg01332	MELO3C005226.2	Melon (DHL92) v3.6.1	carmedB0832
Carg01332	CsaV3_5G017270	Cucumber (Chinese Long) v3	carcucB0866
Carg01332	Cla97C01G007250	Watermelon (97103) v2	carwmbB0858
Carg01332	Bhi12G000870	Wax gourd	carwgoB0963

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg01332	Carg17697	Silver-seed gourd	carcarB469

The following block(s) are covering this gene:


Gene	Organism	Block
Carg01332	Cucurbita moschata (Rifu)	carcmoB1118
Carg01332	Melon (DHL92) v3.5.1	carmeB0820
Carg01332	Melon (DHL92) v3.6.1	carmedB0831