ClCG01G006870 (gene) Watermelon (Charleston Gray)

Overview
NameClCG01G006870
Typegene
OrganismCitrullus lanatus (Watermelon (Charleston Gray))
Descriptionx-ray induced transcript 1 LENGTH=300
LocationCG_Chr01 : 7989357 .. 7993515 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCCTTTTTCTTTTTTTCTCTCTTTTGAAAAAATTTATATAAACCCATTTTTGAAAAAACCCAAATGGGAGATTTCAGTTTAAAAATTTTAGTAATTACAAAATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTAATTTGTTCAATTCCTCACCGTTGAGTTTTGCAGTTATGGACGGCGGCGGCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCGACGGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCACCATCTTCTTCAATTTGAATTCCCACAAAGCTGTTGGAATGCCCTCGAGAGTTTCGATTGGAACAACCAAATTGACGATATTAATAATGATGATTATTATTATTATCATAATTATGACGCGATTTCTACAGGTGGGGTTTTTGTTTCTTTTTTCTTTTGTTTAAAAAGAAAATGAATGGAATTGTCGTCATTATTATATTAATTGAGTCAGCTTTTTATGGAAAGGAAAAAACAAATGTAGGGTTGAAATTAAATGGAGTGAAACTGAATTTTTGGGTTTGGTTTTAATTGGATTTTTGTTGAATTAAGCAGATGAGGGAATAAGCACTTCGCCGAAAAGCAGAACGAGTGAGGAAACGAGTATGGAAGTTATGTGTGGTGGAGAGAGGATGAAAACGCAAGAAGTGGAGACGTTTTCAACTCCAAATTATTACTATGAACATCATCCCAATTCTTCTTCTTCATCATCTTCGAAATTACACAAAGTTGAGGCTGAGTTTTTGGCTGATAAGGAATGCATTCTCTCCATGTCCCGCAACCTGCCTATTTCAACAGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGAAAGAAAGAAAGATATGGGCAATTGTGTATAAGTAATTATAAACAAGATGAAGATTTTTGTGGGGCATTATATTATAATATATGGGCCTCTCTAGATAATGATTTTCTAATAATTTTCATGGGTTACTTTTTTAAAATTTTACAAGTTACGTTTCAAAAATTGAACTCAAAGCCAAAGAAGATCAAAGGGGGAATATTACCTAGTTTATTGTAGTTTTTCAAAAAGCTATAAACAAAAGTTAAATTTTTAAATTTGTTTCTTTAATTTAAGTTCAACTATAAATTTAATTTGTATCTATAAATTTAATCTTTCAATTTTCTATTTTCAATTTTTGTAAAATTTAGGAATCAACTACGTACTTACAAAAGTTTCATTAAATACTATATATATATGATTTTTTTTTTTGGTGTAGCTGGCTCCAACCATCTATTAGACAATCTCTACAACATCAATTTATTTGTTTTTTTTAAAAAAATTATTTTATTGTGCGTATAAAGAAAAGGAAGCATATCATTAAGTGCACCTAAATATTGTTCTATATTTACATATGTAGTATAAAAATTTTGAATTAATCAAGAATTCATATTTAAAACTTATTAAAAATCTAACTAAAATAGATACAAATCTCAAAATTGATGACGGAACATATACTTTCAATGAGAAAATTATATATATAAAGAAAAAGGTAAAATATATATAAAAAAGATTGGCCTCCTTTCATAAAGAAATTATATTGATCTAAACTTTATTATTATTGTTTCTTTAATTGATCAGGAGATGGTGGAATTGAAACAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAGAAGATCTTAATGCCTCCAACCCGGCCGGTCCGACACCCGGTCGGGGATTTTGCATGTAGACCGTGCGTGTCGGCGGATGGACTGGGCCTATCGGGCAAAGCCGTGGTGGCATTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAATAATAAAGACCAAAATGTTAACCCCAAATATTTATTACTACTTCAAAGTCTTTTAAGTTGTTCCAACTTTATCAATTGGCTTTGCCTCTTTGAATTGTACAGAGGGGAGAGAGAAAGAAGGAGAGAAGAGAGAGAGGAAAATGTATATGTAATATAATGATTGGGAGAAGGGAGAAAGAGAGAGAGGTAAATGAATTTGTACTTGTATCATAGTTTTCAATTAAGACAGCCCTCCA

mRNA sequence

GCCTTTTTCTTTTTTTCTCTCTTTTGAAAAAATTTATATAAACCCATTTTTGAAAAAACCCAAATGGGAGATTTCAGTTTAAAAATTTTAGTAATTACAAAATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTAATTTGTTCAATTCCTCACCGTTGAGTTTTGCAGTTATGGACGGCGGCGGCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCGACGGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCACCATCTTCTTCAATTTGAATTCCCACAAAGCTGTTGGAATGCCCTCGAGAGTTTCGATTGGAACAACCAAATTGACGATATTAATAATGATGATTATTATTATTATCATAATTATGACGCGATTTCTACAGATGAGGGAATAAGCACTTCGCCGAAAAGCAGAACGAGTGAGGAAACGAGTATGGAAGTTATGTGTGGTGGAGAGAGGATGAAAACGCAAGAAGTGGAGACGTTTTCAACTCCAAATTATTACTATGAACATCATCCCAATTCTTCTTCTTCATCATCTTCGAAATTACACAAAGTTGAGGCTGAGTTTTTGGCTGATAAGGAATGCATTCTCTCCATGTCCCGCAACCTGCCTATTTCAACAGGAGATGGTGGAATTGAAACAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAGAAGATCTTAATGCCTCCAACCCGGCCGGTCCGACACCCGGTCGGGGATTTTGCATGTAGACCGTGCGTGTCGGCGGATGGACTGGGCCTATCGGGCAAAGCCGTGGTGGCATTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAATAATAAAGACCAAAATGTTAACCCCAAATATTTATTACTACTTCAAAGTCTTTTAAGTTGTTCCAACTTTATCAATTGGCTTTGCCTCTTTGAATTGTACAGAGGGGAGAGAGAAAGAAGGAGAGAAGAGAGAGAGGAAAATGTATATGTAATATAATGATTGGGAGAAGGGAGAAAGAGAGAGAGGTAAATGAATTTGTACTTGTATCATAGTTTTCAATTAAGACAGCCCTCCA

Coding sequence (CDS)

ATGAGTAGTGGTAGTGAACTTCAGTCTCTATCTAATTTGTTCAATTCCTCACCGTTGAGTTTTGCAGTTATGGACGGCGGCGGCGCCGTCATAGACCCATCTTTCTCGCCGGCGATTTCGACGGGTTATTTGGAAGATGCGTTGGTTGAGTATAGTTCAAAACGACGCCGCTTGGATCACCATCTTCTTCAATTTGAATTCCCACAAAGCTGTTGGAATGCCCTCGAGAGTTTCGATTGGAACAACCAAATTGACGATATTAATAATGATGATTATTATTATTATCATAATTATGACGCGATTTCTACAGATGAGGGAATAAGCACTTCGCCGAAAAGCAGAACGAGTGAGGAAACGAGTATGGAAGTTATGTGTGGTGGAGAGAGGATGAAAACGCAAGAAGTGGAGACGTTTTCAACTCCAAATTATTACTATGAACATCATCCCAATTCTTCTTCTTCATCATCTTCGAAATTACACAAAGTTGAGGCTGAGTTTTTGGCTGATAAGGAATGCATTCTCTCCATGTCCCGCAACCTGCCTATTTCAACAGGAGATGGTGGAATTGAAACAAAGAAGACAAAGAAGAGGAAGGTGGTGTATCCATTTGCATTAGTGAAGCCAGGAGGTGTAGAAGGTGATATGACCTTAAACGACATAAACCAGAAGATCTTAATGCCTCCAACCCGGCCGGTCCGACACCCGGTCGGGGATTTTGCATGTAGACCGTGCGTGTCGGCGGATGGACTGGGCCTATCGGGCAAAGCCGTGGTGGCATTGACCAAAATTCATACTCAAGGAAGGAGAGGCACCATCACCATTATTAGAACCAAGGGTTAA

Protein sequence

MSSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG
Homology
[Close]
BLAST of ClCG01G006870 vs. Swiss-Prot
Match: XRI1_ARATH (Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2)

HSP 1 Score: 75.9 bits (185), Expect = 8.0e-13
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = 1 

Query: 199 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 258
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAVIQTS-AFSGKPVV 285

Query: 259 ALTKIHTQGRRGTITIIRTKG 280
             TKI T+G +G+ITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

[Close]
BLAST of ClCG01G006870 vs. TrEMBL
Match: A0A0A0KMV0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099490 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 3.1e-112
Identity = 225/291 (77.32%), Postives = 238/291 (81.79%), Query Frame = 1 

Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLD-- 61
           SSGSEL SL  L NSSPL FA+M+G  AVIDP FSPAISTGYLEDALVEY+SKRRRLD  
Sbjct: 4   SSGSELHSLPFL-NSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDH 63

Query: 62  --HHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS- 121
             HH   F+FPQ+ ++      WNNQIDDINND YYYY+NY AISTDEGIS+SPKSR S 
Sbjct: 64  DQHHFFHFQFPQTSYDY-----WNNQIDDINND-YYYYYNYHAISTDEGISSSPKSRLSN 123

Query: 122 EETSMEVMCGGERMKTQEVETFSTPNYYYEH--------HPNSSSSSSSKLHKVEAEFLA 181
           EETSME M     MKTQ+VET+STPNYYYEH        HPNSSSSSSSK HK EA    
Sbjct: 124 EETSMEDM-----MKTQDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSHKFEA---- 183

Query: 182 DKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP 241
           D++ I SMS NLPISTGDG IE KK KKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP
Sbjct: 184 DQKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP 243

Query: 242 TRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           TRPVRHPVGDFACRPCVSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 244 TRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]
BLAST of ClCG01G006870 vs. TrEMBL
Match: B9HVQ1_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s11090g PE=4 SV=2)

HSP 1 Score: 197.6 bits (501), Expect = 2.0e-47
Identity = 139/293 (47.44%), Postives = 175/293 (59.73%), Query Frame = 1 

Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYS--SKRRRL- 61
           S G +LQ+L  L     L+   MD   +    S     STGYLEDAL+E++  SKRRRL 
Sbjct: 14  SLGWDLQNLGVLNADMTLA---MDRRTSPFFSSLESDFSTGYLEDALLEFNERSKRRRLL 73

Query: 62  ------DHHLLQFE----FPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAI--STDEG 121
                 DH   Q+E     P+S WN     DW     ++ ++++    +   I  ++DE 
Sbjct: 74  LFSTEHDHAHDQYEKSNDLPESNWNEENFDDW-----ELMSENFSCLSHITGIRGTSDEP 133

Query: 122 ISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEF 181
           ++TS  S TSEE ++        +KT E E  S P    E    SSSSS   L    + F
Sbjct: 134 MTTS-MSNTSEEANVI-----SEIKTPE-EGISAP----ETLDYSSSSSYKDLAGTNSIF 193

Query: 182 LADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILM 241
             D         N+P S+ D G + K+    +VVYPFALVKPGG+EGDMT+NDIN++ILM
Sbjct: 194 EKD---------NIPHSSDDDGEKRKRRLGTRVVYPFALVKPGGLEGDMTINDINERILM 253

Query: 242 PPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           PPTRPVRHPVGDFAC+PCVSADG GLSGKAVVALT++HTQG RGTITIIRTKG
Sbjct: 254 PPTRPVRHPVGDFACKPCVSADGPGLSGKAVVALTRVHTQG-RGTITIIRTKG 277

[Close]
BLAST of ClCG01G006870 vs. TrEMBL
Match: A0A061EA44_THECC (Uncharacterized protein OS=Theobroma cacao GN=TCM_011176 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 5.9e-47
Identity = 142/292 (48.63%), Postives = 167/292 (57.19%), Query Frame = 1 

Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYS--SKRRRL- 61
           S G +LQ+L  L     L   VMDG  A   P      S+GYLEDAL+E+S  SKRRRL 
Sbjct: 18  SLGWDLQNLGVLNADMSL---VMDGT-APFFPHLDSDFSSGYLEDALLEFSERSKRRRLL 77

Query: 62  ---DHH-------LLQFEFPQSC-WNALESFDWNNQIDDINNDDYYYYHNYDAISTDEGI 121
              DH        L +  +  SC W   E+F   +QI  IN              +DE +
Sbjct: 78  LCGDHDQTNDLNDLAKSYWNSSCNWGLSENFSCMSQITSING------------VSDEPV 137

Query: 122 STSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFL 181
           STS    +SEE ++        +KT E     +P           SSSSS    V+ +  
Sbjct: 138 STSV---SSEEANIVT-----EIKTPEEAISGSPEAL-------DSSSSSYKGSVKTKSF 197

Query: 182 ADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMP 241
            +K+   S     PIS+       KK    +VVYPFALVKPGG+EGDMTLNDIN++ILMP
Sbjct: 198 FNKDTQFSTD---PISSSGSNDRKKKRVITRVVYPFALVKPGGIEGDMTLNDINERILMP 257

Query: 242 PTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           PTRPVRHPVGDFACRPCVSADG GLSGKAVVALTKIHTQG RGTITIIRTKG
Sbjct: 258 PTRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQG-RGTITIIRTKG 274

[Close]
BLAST of ClCG01G006870 vs. TrEMBL
Match: A0A068UA46_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020465001 PE=4 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 7.7e-47
Identity = 127/252 (50.40%), Postives = 151/252 (59.92%), Query Frame = 1 

Query: 40  STGYLEDALVEYSSKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYY--YYHN 99
           STGYL+DAL E+SSKRRRL+           C    +S + +N   +  +  Y   YY+N
Sbjct: 55  STGYLQDALFEFSSKRRRLEF----------CNTDDQSEELDNSTRNSWSSTYSLDYYNN 114

Query: 100 YDAIS----TDEGISTSPKSRTSEETSMEVMCGGERMKTQE-----VETFSTPNYYYEHH 159
           YD +S      + IS  P S  SEE S+        MKT E      ETF T        
Sbjct: 115 YDYLSQIMTNSDSISGEPMSIISEEASLF-----SEMKTTEEAISNCETFDT-------- 174

Query: 160 PNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTK-KRKVVYPFALVK 219
                 SSS+   V  +  + KE + S+    P   G GG E +K +   KVVYPFALVK
Sbjct: 175 ------SSSQKDSVNIQSTSGKETLRSIDSIFPSGGGGGGGEKRKKRILSKVVYPFALVK 234

Query: 220 PGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQG 279
           PGG+EGD+TLNDIN++ILMPPTRPVRHPVGDFACRP  S DG GLSGKAVVALT+IHTQG
Sbjct: 235 PGGLEGDVTLNDINERILMPPTRPVRHPVGDFACRPLTSPDGPGLSGKAVVALTRIHTQG 276

[Close]
BLAST of ClCG01G006870 vs. TrEMBL
Match: B9HJL7_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14050g PE=4 SV=2)

HSP 1 Score: 194.1 bits (492), Expect = 2.2e-46
Identity = 133/276 (48.19%), Postives = 162/276 (58.70%), Query Frame = 1 

Query: 17  SPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYS--SKRRRLDHHLLQFEFPQSCWNA 76
           S L + +   G    D S     STGYLEDAL+E++  SKRRRL       +      N 
Sbjct: 13  SSLGWDLQSLGVLRADMSLESDFSTGYLEDALLEFNEPSKRRRLLLFATDHDDQSEKSNH 72

Query: 77  LESFDWNNQIDDINNDDYYYY-HNYDAIS--------TDEGISTSPKSRTSEETSM--EV 136
           L   +WN +    N DD+     N+  +S        +DE +STS  S TS+E ++  E+
Sbjct: 73  LPESNWNEE----NFDDWELMSENFSCMSHITGFRGPSDELVSTSV-SNTSDEANVISEI 132

Query: 137 MCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPIS 196
              GE++   E   +S            SSSS   L    + F  +KE       N P S
Sbjct: 133 TTPGEKISAPETLDYS------------SSSSYKDLAATNSIF--EKE-------NSPHS 192

Query: 197 TGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRP 256
           T D   + +K    +VVYPFALVKPGGVEGDMT+NDIN++ILMPPTRPVRHPVGDFACRP
Sbjct: 193 TDDHENKRRKRVATRVVYPFALVKPGGVEGDMTINDINERILMPPTRPVRHPVGDFACRP 252

Query: 257 CVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           CVSADG GLSGKAVVALT+IHTQG RGTITIIRTKG
Sbjct: 253 CVSADGPGLSGKAVVALTRIHTQG-RGTITIIRTKG 261

[Close]
BLAST of ClCG01G006870 vs. TAIR10
Match: AT2G01990.1 (AT2G01990.1 unknown protein)

HSP 1 Score: 152.1 bits (383), Expect = 4.9e-37
Identity = 110/243 (45.27%), Postives = 130/243 (53.50%), Query Frame = 1 

Query: 39  ISTGYLEDALVEYS--SKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYH 98
           +STGYLEDAL+E    SKRRRL      FE P   +N           DD + +D+  + 
Sbjct: 19  VSTGYLEDALIESGERSKRRRL-----LFEDPSKSFN-----------DDDSQNDWGLHE 78

Query: 99  NYDAISTDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSS 158
           +Y  +++      +P   T E  S    C          ET S  N Y    P++S S  
Sbjct: 79  SYSCLNSQ---FVTPHVNTGERISGVSYCQ---------ETIS--NVY--ESPDTSVSY- 138

Query: 159 SKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMT 218
                       DK  +   S   P S+  G     K    K+VYPF LVKPGG E D+T
Sbjct: 139 ------------DKIYVREKSPTEPSSSNCGN--KNKRLITKLVYPFGLVKPGGRENDVT 198

Query: 219 LNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIR 278
           LNDIN++ILM P+RP+RHPVGDFA RPCVS  G GLSGKAVVALTKI TQG RGTITIIR
Sbjct: 199 LNDINERILMAPSRPIRHPVGDFASRPCVSGRGPGLSGKAVVALTKIQTQG-RGTITIIR 213

Query: 279 TKG 280
           TKG
Sbjct: 259 TKG 213

[Close]
BLAST of ClCG01G006870 vs. TAIR10
Match: AT1G14630.1 (AT1G14630.1 unknown protein)

HSP 1 Score: 138.7 bits (348), Expect = 5.6e-33
Identity = 79/140 (56.43%), Postives = 94/140 (67.14%), Query Frame = 1 

Query: 140 TPNYYYEHHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKV 199
           T + + +  PNSS +  S+          +K  I S +   P S+     +    +K++V
Sbjct: 100 TSSQFADESPNSSINICSE----------EKSSISSRNSFEPSSSTSK--KNDYDEKKRV 159

Query: 200 VYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVA 259
           VYPF +VKPGG E D+TLNDIN++ILMP  RPVRHPVGDFACRPCVSADG GLSGKAVVA
Sbjct: 160 VYPFGVVKPGGREEDITLNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVA 219

Query: 260 LTKIHTQGRRGTITIIRTKG 280
            TKI T G RGTITIIRTKG
Sbjct: 220 FTKIQTLG-RGTITIIRTKG 226


HSP 2 Score: 123.2 bits (308), Expect = 2.5e-28
Identity = 95/243 (39.09%), Postives = 123/243 (50.62%), Query Frame = 1 

Query: 39  ISTGYLEDALVEYS--SKRRRLDHHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYH 98
           +STGYLEDAL+E+S  SKRRRL                  SF   N  +D  ++D  +  
Sbjct: 50  VSTGYLEDALIEFSGRSKRRRL------------------SF---NGAEDKPDNDLDHSQ 109

Query: 99  NYDAISTDEGISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSS 158
           N+  +S +   ++S  +  S  +S+ +        ++E  + S+ N +    P+SS+S  
Sbjct: 110 NHWGLSENYSCTSSQFADESPNSSINIC-------SEEKSSISSRNSF---EPSSSTSKK 169

Query: 159 SKLHKVEAEFLADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMT 218
           +       ++   K  +       P     GG E                       D+T
Sbjct: 170 N-------DYDEKKRVVYPFGVVKP-----GGREE----------------------DIT 226

Query: 219 LNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIR 278
           LNDIN++ILMP  RPVRHPVGDFACRPCVSADG GLSGKAVVA TKI T G RGTITIIR
Sbjct: 230 LNDINKRILMPSARPVRHPVGDFACRPCVSADGPGLSGKAVVAFTKIQTLG-RGTITIIR 226

Query: 279 TKG 280
           TKG
Sbjct: 290 TKG 226

[Close]
BLAST of ClCG01G006870 vs. TAIR10
Match: AT5G48720.2 (AT5G48720.2 x-ray induced transcript 1)

HSP 1 Score: 75.9 bits (185), Expect = 4.5e-14
Identity = 41/81 (50.62%), Postives = 48/81 (59.26%), Query Frame = 1 

Query: 199 VVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVV 258
           ++YPFA +KP GV G MTL DINQKI  PP +P  H        P V       SGK VV
Sbjct: 226 IIYPFAFIKPCGVHGGMTLKDINQKIRNPPAKPKAH-----IEEPAVIQTS-AFSGKPVV 285

Query: 259 ALTKIHTQGRRGTITIIRTKG 280
             TKI T+G +G+ITI+RT+G
Sbjct: 286 GKTKIRTEGGKGSITIMRTRG 300

[Close]
BLAST of ClCG01G006870 vs. NCBI nr
Match: gi|449467410|ref|XP_004151416.1| (PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus])

HSP 1 Score: 412.9 bits (1060), Expect = 4.4e-112
Identity = 225/291 (77.32%), Postives = 238/291 (81.79%), Query Frame = 1 

Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYSSKRRRLD-- 61
           SSGSEL SL  L NSSPL FA+M+G  AVIDP FSPAISTGYLEDALVEY+SKRRRLD  
Sbjct: 4   SSGSELHSLPFL-NSSPLGFAIMEGAAAVIDPCFSPAISTGYLEDALVEYTSKRRRLDDH 63

Query: 62  --HHLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS- 121
             HH   F+FPQ+ ++      WNNQIDDINND YYYY+NY AISTDEGIS+SPKSR S 
Sbjct: 64  DQHHFFHFQFPQTSYDY-----WNNQIDDINND-YYYYYNYHAISTDEGISSSPKSRLSN 123

Query: 122 EETSMEVMCGGERMKTQEVETFSTPNYYYEH--------HPNSSSSSSSKLHKVEAEFLA 181
           EETSME M     MKTQ+VET+STPNYYYEH        HPNSSSSSSSK HK EA    
Sbjct: 124 EETSMEDM-----MKTQDVETYSTPNYYYEHPHPHHHHHHPNSSSSSSSKSHKFEA---- 183

Query: 182 DKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP 241
           D++ I SMS NLPISTGDG IE KK KKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP
Sbjct: 184 DQKSIFSMSTNLPISTGDGEIEPKKAKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPP 243

Query: 242 TRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           TRPVRHPVGDFACRPCVSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 244 TRPVRHPVGDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 278

[Close]
BLAST of ClCG01G006870 vs. NCBI nr
Match: gi|659072704|ref|XP_008466833.1| (PREDICTED: LOW QUALITY PROTEIN: protein roadkill-like [Cucumis melo])

HSP 1 Score: 385.6 bits (989), Expect = 7.5e-104
Identity = 216/283 (76.33%), Postives = 230/283 (81.27%), Query Frame = 1 

Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGA-VIDPSFSPAISTGYLEDALVEYSSKRRRLDH 61
           SSGSEL SLS L NSSPL FA+M+GGGA VIDP FSPAISTGYLEDAL+EY+SKRRRLDH
Sbjct: 4   SSGSELHSLSFL-NSSPLGFAIMEGGGAAVIDPCFSPAISTGYLEDALLEYTSKRRRLDH 63

Query: 62  HLLQFEFPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAISTDEGISTSPKSRTS-EET 121
               F F  +   AL        +  I N   YYY+NYDAISTDEGIS+SPKSR S EET
Sbjct: 64  DQHHF-FNLNSHKALTIIGTTKLMIXIMN---YYYYNYDAISTDEGISSSPKSRLSNEET 123

Query: 122 SMEVMCGGERMKTQEVETFSTPNYYYEHH---PNSSSSSSSKLHKVEAEFLADKECILSM 181
           SME +     MKTQ+VET+STPNYYYEHH   PNSSSSSSSK HK EA    D++ I SM
Sbjct: 124 SMEAI-----MKTQDVETYSTPNYYYEHHHHHPNSSSSSSSKSHKFEA----DQKSIFSM 183

Query: 182 SRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPV 241
           S NLPISTGDG IETKK KKRKVVYPFALVKPGGVEGD+TLNDINQKILMPPTRPVRHPV
Sbjct: 184 STNLPISTGDGEIETKKAKKRKVVYPFALVKPGGVEGDVTLNDINQKILMPPTRPVRHPV 243

Query: 242 GDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           GDFACRPCVSADG GLSGKAVVALTKIHTQGRRGTITIIRTKG
Sbjct: 244 GDFACRPCVSADGPGLSGKAVVALTKIHTQGRRGTITIIRTKG 272

[Close]
BLAST of ClCG01G006870 vs. NCBI nr
Match: gi|658010598|ref|XP_008340542.1| (PREDICTED: protein XRI1 [Malus domestica])

HSP 1 Score: 202.2 bits (513), Expect = 1.2e-48
Identity = 134/260 (51.54%), Postives = 163/260 (62.69%), Query Frame = 1 

Query: 40  STGYLEDALVEYS--SKRRRLDHH-------------LLQFEFPQSCWNALESFDWNNQI 99
           STGYLEDALVE+S  SKRRRL  +             LL   +  S W   E+FD  +Q+
Sbjct: 64  STGYLEDALVEFSERSKRRRLLAYTDGDNELKDSSTALLAKGYWNSDWEVSENFDCMSQL 123

Query: 100 DDINNDDYYYYHNYDAISTDEGISTSPKSR-TSEETSMEVMCGGERMKTQEVETFSTPNY 159
              ++           +  D    T+P SR  SEE + +++  G ++ T E  T S P  
Sbjct: 124 TTSSSGP-------SVLLGDPVSITTPMSRLVSEEITNDIV--GTKINTPEEPTMSAP-- 183

Query: 160 YYEHHPNSSSSSSSKLHKVEAEFL-ADKECILSMSRNLPISTGDGGIETKKTKKR---KV 219
             E   +SSSSSS       +++L A KE  L+   N+ +    GG + KK KKR   +V
Sbjct: 184 --EAFDSSSSSSSKDAANTNSDYLPAPKETFLT---NIAVPAVGGGGDEKKKKKRVITRV 243

Query: 220 VYPFALVKPGGVEGDMTLNDINQKILMPPTRPVRHPVGDFACRPCVSADGLGLSGKAVVA 279
           VYPFALVKPGGVEGD+TLNDIN++ILMPPTRPVRHPVGDFACRPCVSADG GLSGKAVVA
Sbjct: 244 VYPFALVKPGGVEGDVTLNDINERILMPPTRPVRHPVGDFACRPCVSADGPGLSGKAVVA 303

[Close]
BLAST of ClCG01G006870 vs. NCBI nr
Match: gi|502141740|ref|XP_004504615.1| (PREDICTED: protein XRI1 [Cicer arietinum])

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 140/286 (48.95%), Postives = 171/286 (59.79%), Query Frame = 1 

Query: 13  LFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEY--SSKRRRL--DHHLLQFEFP 72
           + NS  +S  +MDG G           STGYLEDALVE+  SSKRRRL   ++    E  
Sbjct: 29  ILNSDNMSL-IMDGSGGSFSNHEESDFSTGYLEDALVEFGESSKRRRLLQPYNDTDDEQS 88

Query: 73  QSCWNALESFD---WN-NQIDDINNDDYYYYHNYDAIS--TDEGISTSPKSRTSEETSME 132
           +S   +++ FD   WN N I     ++++     + I   +DE IST  +SR SE+ S+ 
Sbjct: 89  KSTTTSIDDFDKSFWNFNPIWHQPVENFFCMDQIERICGFSDEHISTL-RSRISEQPSIV 148

Query: 133 VMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEFLADKECILSMSRNLPI 192
           +    E  KT E ET S         PNSSSSS  +L    ++   D           P 
Sbjct: 149 L----EDTKTTE-ETISA-----SESPNSSSSSYKELLPFTSKISRDTP---------PG 208

Query: 193 STGDGGIETKK---------TKKRKVVYPFALVKPGGVEGDMTLNDINQKILMPPTRPVR 252
           S+ D  +  KK         T K +VVYPFALVKPGG EGD+TLNDIN++ILMPPT+PVR
Sbjct: 209 SSSDEMMRKKKVLRTATAIATTKTRVVYPFALVKPGGEEGDVTLNDINERILMPPTKPVR 268

Query: 253 HPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           HPVGDFACRPCVSA G GLSGKAVVALT+IHTQGRRGTITIIRTKG
Sbjct: 269 HPVGDFACRPCVSAQGPGLSGKAVVALTRIHTQGRRGTITIIRTKG 293

[Close]
BLAST of ClCG01G006870 vs. NCBI nr
Match: gi|566190224|ref|XP_002314751.2| (hypothetical protein POPTR_0010s11090g [Populus trichocarpa])

HSP 1 Score: 197.6 bits (501), Expect = 2.9e-47
Identity = 139/293 (47.44%), Postives = 175/293 (59.73%), Query Frame = 1 

Query: 2   SSGSELQSLSNLFNSSPLSFAVMDGGGAVIDPSFSPAISTGYLEDALVEYS--SKRRRL- 61
           S G +LQ+L  L     L+   MD   +    S     STGYLEDAL+E++  SKRRRL 
Sbjct: 14  SLGWDLQNLGVLNADMTLA---MDRRTSPFFSSLESDFSTGYLEDALLEFNERSKRRRLL 73

Query: 62  ------DHHLLQFE----FPQSCWNALESFDWNNQIDDINNDDYYYYHNYDAI--STDEG 121
                 DH   Q+E     P+S WN     DW     ++ ++++    +   I  ++DE 
Sbjct: 74  LFSTEHDHAHDQYEKSNDLPESNWNEENFDDW-----ELMSENFSCLSHITGIRGTSDEP 133

Query: 122 ISTSPKSRTSEETSMEVMCGGERMKTQEVETFSTPNYYYEHHPNSSSSSSSKLHKVEAEF 181
           ++TS  S TSEE ++        +KT E E  S P    E    SSSSS   L    + F
Sbjct: 134 MTTS-MSNTSEEANVI-----SEIKTPE-EGISAP----ETLDYSSSSSYKDLAGTNSIF 193

Query: 182 LADKECILSMSRNLPISTGDGGIETKKTKKRKVVYPFALVKPGGVEGDMTLNDINQKILM 241
             D         N+P S+ D G + K+    +VVYPFALVKPGG+EGDMT+NDIN++ILM
Sbjct: 194 EKD---------NIPHSSDDDGEKRKRRLGTRVVYPFALVKPGGLEGDMTINDINERILM 253

Query: 242 PPTRPVRHPVGDFACRPCVSADGLGLSGKAVVALTKIHTQGRRGTITIIRTKG 280
           PPTRPVRHPVGDFAC+PCVSADG GLSGKAVVALT++HTQG RGTITIIRTKG
Sbjct: 254 PPTRPVRHPVGDFACKPCVSADGPGLSGKAVVALTRVHTQG-RGTITIIRTKG 277

The following BLAST results are available for this feature:
BLAST of ClCG01G006870 vs. Swiss-Prot
Match NameE-valueIdentityDescription
XRI1_ARATH8.0e-1350.62Protein XRI1 OS=Arabidopsis thaliana GN=XRI1 PE=1 SV=2[more]
BLAST of ClCG01G006870 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KMV0_CUCSA3.1e-11277.32Uncharacterized protein OS=Cucumis sativus GN=Csa_5G099490 PE=4 SV=1[more]
B9HVQ1_POPTR2.0e-4747.44Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s11090g PE=4 SV=2[more]
A0A061EA44_THECC5.9e-4748.63Uncharacterized protein OS=Theobroma cacao GN=TCM_011176 PE=4 SV=1[more]
A0A068UA46_COFCA7.7e-4750.40Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00020465001 PE=4 SV=1[more]
B9HJL7_POPTR2.2e-4648.19Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s14050g PE=4 SV=2[more]
BLAST of ClCG01G006870 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G01990.14.9e-3745.27 unknown protein[more]
AT1G14630.15.6e-3356.43 unknown protein[more]
AT5G48720.24.5e-1450.62 x-ray induced transcript 1[more]
BLAST of ClCG01G006870 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449467410|ref|XP_004151416.1|4.4e-11277.32PREDICTED: uncharacterized protein LOC101215634 [Cucumis sativus][more]
gi|659072704|ref|XP_008466833.1|7.5e-10476.33PREDICTED: LOW QUALITY PROTEIN: protein roadkill-like [Cucumis melo][more]
gi|658010598|ref|XP_008340542.1|1.2e-4851.54PREDICTED: protein XRI1 [Malus domestica][more]
gi|502141740|ref|XP_004504615.1|3.4e-4848.95PREDICTED: protein XRI1 [Cicer arietinum][more]
gi|566190224|ref|XP_002314751.2|2.9e-4747.44hypothetical protein POPTR_0010s11090g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0006522 alanine metabolic process
biological_process GO:0006531 aspartate metabolic process
biological_process GO:0019482 beta-alanine metabolic process
biological_process GO:0006536 glutamate metabolic process
biological_process GO:0019530 taurine metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0004351 glutamate decarboxylase activity
molecular_function GO:0030170 pyridoxal phosphate binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
ClCG01G006870.1ClCG01G006870.1mRNA


InterPro
Analysis Name: InterPro Annotations of watermelon (Charleston Gray)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33385FAMILY NOT NAMEDcoord: 100..279
score: 1.4
NoneNo IPR availablePANTHERPTHR33385:SF5SUBFAMILY NOT NAMEDcoord: 100..279
score: 1.4