CsaV3_5G010280 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G010280
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionMyb transcription factor
Locationchr5 : 6167221 .. 6169985 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGAGTAGATTTTATGGATAACTATGGTTTTGTGAAAAATCTTGTTCAAATTTCAATGACTTACCAAAGATTCAAGGGGGGAAAAACATATCAAATTTCCAACTAATTAACACCGGTGGGTCACTTTCTTAATGGCAATAGCAAGTAGTTTGTGGTTAATAACTTTCTTAATGCCAATACCAAGCAGTTTGTGGTTAATAAATTTCTGTTGACATATTCAAAAATTCTAAGAACGAGACTTTTATTGTATAACTTATCCAATTTGATCTTTTAGTTTTAAGTTTATATATTAAGAAATATCGAATAGATCAATAAATACAAAACACAAAATTAAAAGTTTTTTAGATACTATTTTCTTTCATTATTGAATTTAGGGTTGATATTATAAAATATTATTGAATATATATATATATACAAAAGAATAAGAATTTAGGAAAGCGGTTAGGAAGAGTCCAAGAAAGCCACGCATGGTAATTGAACGTTATTCACTACAACAGTGTGCTGTTACGGTGACACCGATAAACTCTGCCTTGGCAGTTCCCTATGTAAACGGATACCCGTTACGTCTTTCCATTACTTTCCCTCATCCAAACCTCTCTCCCCACCTACTCCTTTTTTTCTTTTTCCATTTTCATTTTCATCCCTACAAAATTTTAAAAACTAACATCAACTAAACTTTTAAAAAATAAAAGTCTTACATATTTTTAAAATGGAAAGATCAAGATAAAATAAATCTGTAGCGTTGAGATTAAATTTTAAAGTATTTCAACTTCATTTGAATAGTAAATAAATAAATGGTTAAATTTATAGATTTATATACTATGTCATTGGTCTCTTTCCTTTTTAAGTTATCCAAGTTGAGTTGTTATATATACTTTGATTAATCTTAAATCTAACAATCTCAAACAAGAAAATACATTTTTTTTCACAATTTAGAAAACAGTAAATAAAAATGCAAAAATGAAGCAATTTATAGAGAAAAATTAGAATTGATTATAAAAGATGAGGACTAATATGAAAAAAGTGAGGAGTGTAGGGACGTTAAAGGAAAAGAAAGAAACAAACGCGGTTTTTTGGTGTGTGTATTTGTTAGAAGTGGAAGTAGTGAGAAAGTCGTTATTTGAAGTAGCGGTTTTACGGTTCATGCCCAACAACCCCTGTTTGGAAACGGTTAGAAAAATCTCCCATTTATCTCTCCTCTTTCTTCTTCTTCAATTAAACTTCAAAACCCTAAAAATCCAAATCCAAATTCCGCCATGGTTTTGATCGGAATCGCCCTCCCAAATCACAACAACAATACAAATTCAAACAACAATAATAATAATCATAATCGAGTTAAGGGGTCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTTGAACAGCATGGCCCCAGAAATTGGTCTTTGATCAGCACTGGAATTCCTGGTCGTTCCGGTAAGTCCTGCCGTTTGCGTTGGTGTAATCAGCTCAGTCCCACCGTTCAGCATCGTCCCTTTACTCCAGCGGAGGATGCTTTGATTCTTCAAGCGCACGCTGTTCATGGTAACAAATGGTCCACTATTGCTCGCTCGTTACCTGGCCGAACCGACAATGCGATTAAGAATCATTGGAACTCGACGCTTAGACGCCGTCGTGATGCCGACTTGTCGTCTGATTCCACGGCATTTCTGAAGCGGCCGAGTTATGAAGTTTCTAGGTCGGCGTCGGATGACGATGATAACGATGATGATGACTCGGAAGCTTCTTTGAAGCGTACGTGCTTTGACCGGAACAGCGTTGGAGGAGGAGAACCGGAGACGTCGTTGAGACTGTCGTTGCCGGGAGAGGTGGTGGTAGCGGCGGAGATGGATGTGAAAGTGAAGGAGGAGGTGACGGTGGAGAGCGAAAAGAACGACGGACGGCGACGGGTGGTAGCGGCGGCGGAGGAAGAGAAAGGGAATCGGAAAAAGGAGGTGGATGAGAGTTGTTTGGCGACGATAATGCAGAGGATGATAGCCCAGGAGGTTAGAAATTACATAGATAGTTTACGGGCACGTGGTGGGCTTGGAATTGGGCCTGGAGTTGGGCCCGGGCTGGATCCTGCAGCCCAAGAAACTCCATAGAGTAATTCCTCTTTTTCTTATCCAATCTTTGGTTGTTTGATTTATTGGGATAAGATTAAAACACACGAGAAGAAGAAAGAAGAAAAGGAGAAAAAAAAACTCTTTTTTTTTTCTTTTCAGATTGTAGTGTTTGGATAAAGAGAAAAAACGAGAAGTTGTGGACTAGATGGGCAGTTTAGATTTTAGTTTTTAAAGGGGTTTGGTGTTAAAATATTTTAATCTCCTTTTCTTTTTTACATGGTGAAAAAAAAAATGAAGCAAGGGATTTTAGGGCATAGGAGTTGAATGTGGGGATGTGTTGTTTATTTGTCGGTTTAATTAAGAGGTTTAAGGATTTGGTTGTTTAATTAAGAGGTTTAAGGATTTGGTTGTTTAATTAAGAGGTTTAAGGATTTGGTTGTTTTCATGTTTAATTTAAAGGGTCATTGAGAGTTGAATTGGAAGTACCATTTTGTTGGCTACTTTGGCAATTTTCGTTTCGATGACACACTTTCTTGTGAATAAAAATATGTTATCGAATATGGCTTTGTATTGTTGATTTAGTTGGTTTTTGTTAGTTGAATCAATTGGAGTGTACGTCTGGGTTGTGTGTTTGGCAATTGGCAAAGCATAGGTTGATGATTGATTAAAGTGGCTAAGATACCTCATCCATCC

mRNA sequence

ATGGTTTTGATCGGAATCGCCCTCCCAAATCACAACAACAATACAAATTCAAACAACAATAATAATAATCATAATCGAGTTAAGGGGTCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTTGAACAGCATGGCCCCAGAAATTGGTCTTTGATCAGCACTGGAATTCCTGGTCGTTCCGGTAAGTCCTGCCGTTTGCGTTGGTGTAATCAGCTCAGTCCCACCGTTCAGCATCGTCCCTTTACTCCAGCGGAGGATGCTTTGATTCTTCAAGCGCACGCTGTTCATGGTAACAAATGGTCCACTATTGCTCGCTCGTTACCTGGCCGAACCGACAATGCGATTAAGAATCATTGGAACTCGACGCTTAGACGCCGTCGTGATGCCGACTTGTCGTCTGATTCCACGGCATTTCTGAAGCGGCCGAGTTATGAAGTTTCTAGGTCGGCGTCGGATGACGATGATAACGATGATGATGACTCGGAAGCTTCTTTGAAGCGTACGTGCTTTGACCGGAACAGCGTTGGAGGAGGAGAACCGGAGACGTCGTTGAGACTGTCGTTGCCGGGAGAGGTGGTGGTAGCGGCGGAGATGGATGTGAAAGTGAAGGAGGAGGTGACGGTGGAGAGCGAAAAGAACGACGGACGGCGACGGGTGGTAGCGGCGGCGGAGGAAGAGAAAGGGAATCGGAAAAAGGAGGTGGATGAGAGTTGTTTGGCGACGATAATGCAGAGGATGATAGCCCAGGAGGTTAGAAATTACATAGATAGTTTACGGGCACGTGGTGGGCTTGGAATTGGGCCTGGAGTTGGGCCCGGGCTGGATCCTGCAGCCCAAGAAACTCCATAG

Coding sequence (CDS)

ATGGTTTTGATCGGAATCGCCCTCCCAAATCACAACAACAATACAAATTCAAACAACAATAATAATAATCATAATCGAGTTAAGGGGTCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTTGAACAGCATGGCCCCAGAAATTGGTCTTTGATCAGCACTGGAATTCCTGGTCGTTCCGGTAAGTCCTGCCGTTTGCGTTGGTGTAATCAGCTCAGTCCCACCGTTCAGCATCGTCCCTTTACTCCAGCGGAGGATGCTTTGATTCTTCAAGCGCACGCTGTTCATGGTAACAAATGGTCCACTATTGCTCGCTCGTTACCTGGCCGAACCGACAATGCGATTAAGAATCATTGGAACTCGACGCTTAGACGCCGTCGTGATGCCGACTTGTCGTCTGATTCCACGGCATTTCTGAAGCGGCCGAGTTATGAAGTTTCTAGGTCGGCGTCGGATGACGATGATAACGATGATGATGACTCGGAAGCTTCTTTGAAGCGTACGTGCTTTGACCGGAACAGCGTTGGAGGAGGAGAACCGGAGACGTCGTTGAGACTGTCGTTGCCGGGAGAGGTGGTGGTAGCGGCGGAGATGGATGTGAAAGTGAAGGAGGAGGTGACGGTGGAGAGCGAAAAGAACGACGGACGGCGACGGGTGGTAGCGGCGGCGGAGGAAGAGAAAGGGAATCGGAAAAAGGAGGTGGATGAGAGTTGTTTGGCGACGATAATGCAGAGGATGATAGCCCAGGAGGTTAGAAATTACATAGATAGTTTACGGGCACGTGGTGGGCTTGGAATTGGGCCTGGAGTTGGGCCCGGGCTGGATCCTGCAGCCCAAGAAACTCCATAG

Protein sequence

MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCFDRNSVGGGEPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESCLATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP
Homology
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BLAST of CsaV3_5G010280 vs. NCBI nr
Match: XP_004148201.1 (PREDICTED: transcription factor MYB44-like [Cucumis sativus] >KGN50672.1 hypothetical protein Csa_5G209490 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 1.9e-111
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 

Query: 1   MVLIGIAXXXXXXXXXXXXXXXXXXXXKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60
           MVLIGIAXXXXXXXXXXXXXXXXXXXXKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG
Sbjct: 1   MVLIGIAXXXXXXXXXXXXXXXXXXXXKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGG 180
           WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGG
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGG 180

Query: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESC 240
           EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESC
Sbjct: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESC 240

Query: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIXXXXXXXXXXXAQETP 285
           LATIMQRMIAQEVRNYIDSLRARGGLGIXXXXXXXXXXXAQETP
Sbjct: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIXXXXXXXXXXXAQETP 284

[Close]
BLAST of CsaV3_5G010280 vs. NCBI nr
Match: XP_016901632.1 (PREDICTED: transcription factor MYB44-like [Cucumis melo])

HSP 1 Score: 379.8 bits (974), Expect = 8.2e-102
Identity = 243/257 (94.55%), Postives = 247/257 (96.11%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPFTPAE
Sbjct: 29  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPAE 88

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 147
           DA+I+QAHAVHGNKWSTIAR LPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE
Sbjct: 89  DAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 148

Query: 148 VSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGGEPETSLRLSLPGEVVVAAEMDVKVKEE 207
           VSRSXXXXXXXXXXXXXX LKRTCF+RNSVGGGEPETSLRLSLPGEVVVAAEMDV+VKEE
Sbjct: 149 VSRSXXXXXXXXXXXXXXXLKRTCFNRNSVGGGEPETSLRLSLPGEVVVAAEMDVRVKEE 208

Query: 208 VTVESEXXXXXXXXXXXXXXXXXXXXXXVDESCLATIMQRMIAQEVRNYIDSLRARGGLG 267
           VTVE  XXXXXXXXXXXXXXXXXXXXXX     LATIMQRMIAQEVRNYIDSLRARGGLG
Sbjct: 209 VTVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATIMQRMIAQEVRNYIDSLRARGGLG 268

Query: 268 IXXXXXXXXXXXAQETP 285
           IXXXXXXXXXXXAQETP
Sbjct: 269 IXXXXXXXXXXXAQETP 285

[Close]
BLAST of CsaV3_5G010280 vs. NCBI nr
Match: XP_023526760.1 (transcription factor MYB73-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 333.6 bits (854), Expect = 6.7e-88
Identity = 199/266 (74.81%), Postives = 209/266 (78.57%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPFTPAE
Sbjct: 21  KGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPAE 80

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 147
           D+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNHWNSTLRRRRDAD SSDSTAF+KRPS E
Sbjct: 81  DSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDSTAFMKRPSCE 140

Query: 148 VSRSXXXXXXXXXXXXXXSLKRTCF----DRNSVGGGE-PETSLRLSLPGEVVVAAEMDV 207
           VSRS              S KR CF    +RN  G GE PETSLRLSLPGEVVV A   V
Sbjct: 141 VSRS-----ASDDDDSEGSFKRRCFGMAVERNGGGEGEGPETSLRLSLPGEVVVPAAC-V 200

Query: 208 KVKEEVTVESE-----XXXXXXXXXXXXXXXXXXXXXXVDESCLATIMQRMIAQEVRNYI 267
           KVKEEVTV+SE     XXXXXXXXXXXXXXXX      +DESC+ATIMQRMIA+EVRNYI
Sbjct: 201 KVKEEVTVDSEXXXXXXXXXXXXXXXXXXXXXGNRKREMDESCMATIMQRMIAREVRNYI 260

Query: 268 DSLRARGGLGIXXXXXXXXXXXAQET 284
           DSLRA GGL I            Q+T
Sbjct: 261 DSLRAHGGLSIGPNIGPGLDSGVQDT 280

[Close]
BLAST of CsaV3_5G010280 vs. NCBI nr
Match: XP_022996289.1 (transcription factor MYB44-like [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 6.1e-81
Identity = 172/264 (65.15%), Postives = 183/264 (69.32%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPFTPAE
Sbjct: 21  KGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPAE 80

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 147
           D+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNHWNSTL+RRRDAD SSDSTAF+KRPS E
Sbjct: 81  DSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLKRRRDADFSSDSTAFMKRPSCE 140

Query: 148 VSRSXXXXXXXXXXXXXXSLKRTCF----DRNS---VGGGEPETSLRLSLPGEVVVAAEM 207
           V RS              S KR CF    +RN               LSLPGEVVV A  
Sbjct: 141 VLRS-----ASDDDDSEGSFKRRCFGMAVERNGXXXXXXXXXXXXXXLSLPGEVVVPAAC 200

Query: 208 DVKVKEEVTVES-EXXXXXXXXXXXXXXXXXXXXXXVDESCLATIMQRMIAQEVRNYIDS 267
            VKVKEEVTV+S E                      +DESC+ATIMQRMIA+EVRNYIDS
Sbjct: 201 -VKVKEEVTVDSEENDGRRHVAVAATAEEKGNRKREMDESCMATIMQRMIAREVRNYIDS 260

Query: 268 LRARGGLGIXXXXXXXXXXXAQET 284
           LRA GGL I            Q+T
Sbjct: 261 LRAHGGLSIGPNIGSGLDSGVQDT 278

[Close]
BLAST of CsaV3_5G010280 vs. NCBI nr
Match: XP_022941657.1 (transcription factor MYB44-like [Cucurbita moschata])

HSP 1 Score: 309.3 bits (791), Expect = 1.4e-80
Identity = 180/264 (68.18%), Postives = 189/264 (71.59%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPFTPAE
Sbjct: 21  KGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPAE 80

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 147
           D+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNHWNSTLRRRRDAD SSDSTAF+KRPS E
Sbjct: 81  DSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDSTAFMKRPSCE 140

Query: 148 VSRSXXXXXXXXXXXXXXSLKRTCF-------DRNSVGGGEPETSLRLSLPGEVVVAAEM 207
           VSRS     XXXXXXXXX  KR CF                      LSLPGEVVV A  
Sbjct: 141 VSRS----AXXXXXXXXXXXKRRCFGMAVXXXXXXXXXXXXXXXXXXLSLPGEVVVPAAC 200

Query: 208 DVKVKEEVTVES-EXXXXXXXXXXXXXXXXXXXXXXVDESCLATIMQRMIAQEVRNYIDS 267
            VKVKEEVTV+S E                      +DESC+ATIMQRMIA+EVRNYIDS
Sbjct: 201 -VKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIAREVRNYIDS 260

Query: 268 LRARGGLGIXXXXXXXXXXXAQET 284
           LRA GGL I            Q+T
Sbjct: 261 LRAHGGLSIGPNIGPGLDSGVQDT 279

[Close]
BLAST of CsaV3_5G010280 vs. TAIR10
Match: AT2G23290.1 (myb domain protein 70)

HSP 1 Score: 164.5 bits (415), Expect = 9.8e-41
Identity = 75/101 (74.26%), Postives = 83/101 (82.18%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WSP+ED  L  LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP V+HR FT  E
Sbjct: 13  KGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFTAEE 72

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I+ AHA  GNKW+TIAR L GRTDNAIKNHWNSTL+R+
Sbjct: 73  DDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 113

[Close]
BLAST of CsaV3_5G010280 vs. TAIR10
Match: AT3G55730.1 (myb domain protein 109)

HSP 1 Score: 164.5 bits (415), Expect = 9.8e-41
Identity = 72/101 (71.29%), Postives = 84/101 (83.17%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WS +EDA L KLV + GPRNWSLI+ GIPGRSGKSCRLRWCNQL P ++ +PF+  E
Sbjct: 56  KGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSDEE 115

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D +I+ AHAVHGNKW+ IA+ L GRTDNAIKNHWNSTLRR+
Sbjct: 116 DRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRK 156

[Close]
BLAST of CsaV3_5G010280 vs. TAIR10
Match: AT4G37260.1 (myb domain protein 73)

HSP 1 Score: 164.5 bits (415), Expect = 9.8e-41
Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WSP+ED  L +LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP V+HR F+  E
Sbjct: 13  KGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFSQEE 72

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I++AHA  GNKW+TI+R L GRTDNAIKNHWNSTL+R+
Sbjct: 73  DETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]
BLAST of CsaV3_5G010280 vs. TAIR10
Match: AT5G67300.1 (myb domain protein r1)

HSP 1 Score: 161.8 bits (408), Expect = 6.4e-40
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF+  E
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I +AHA  GNKW+TIAR L GRTDNA+KNHWNSTL+R+
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of CsaV3_5G010280 vs. TAIR10
Match: AT3G50060.1 (myb domain protein 77)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-39
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WS +ED  L ++VE++GPRNWS IS  IPGRSGKSCRLRWCNQLSP V+HRPF+P E
Sbjct: 6   KGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFSPEE 65

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I+ A A  GNKW+TIAR L GRTDNA+KNHWNSTL+R+
Sbjct: 66  DETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of CsaV3_5G010280 vs. Swiss-Prot
Match: sp|O23160|MYB73_ARATH (Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.8e-39
Identity = 73/101 (72.28%), Postives = 85/101 (84.16%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WSP+ED  L +LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP V+HR F+  E
Sbjct: 13  KGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRAFSQEE 72

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I++AHA  GNKW+TI+R L GRTDNAIKNHWNSTL+R+
Sbjct: 73  DETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK 113

[Close]
BLAST of CsaV3_5G010280 vs. Swiss-Prot
Match: sp|Q9FDW1|MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1)

HSP 1 Score: 161.8 bits (408), Expect = 1.1e-38
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF+  E
Sbjct: 6   KGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEE 65

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I +AHA  GNKW+TIAR L GRTDNA+KNHWNSTL+R+
Sbjct: 66  DETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of CsaV3_5G010280 vs. Swiss-Prot
Match: sp|Q9SN12|MYB77_ARATH (Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 2.0e-38
Identity = 71/101 (70.30%), Postives = 83/101 (82.18%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WS +ED  L ++VE++GPRNWS IS  IPGRSGKSCRLRWCNQLSP V+HRPF+P E
Sbjct: 6   KGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFSPEE 65

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I+ A A  GNKW+TIAR L GRTDNA+KNHWNSTL+R+
Sbjct: 66  DETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

[Close]
BLAST of CsaV3_5G010280 vs. Swiss-Prot
Match: sp|O04192|MYB25_ARATH (Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.4e-36
Identity = 67/101 (66.34%), Postives = 81/101 (80.20%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG W P++D  L +LV+  GPRNW+LIS GIPGRSGKSCRLRWCNQL P ++ +PF+  E
Sbjct: 50  KGPWLPEQDEALTRLVKMCGPRNWNLISRGIPGRSGKSCRLRWCNQLDPILKRKPFSDEE 109

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           + +I+ A AV GNKWS IA+ LPGRTDNAIKNHWNS LRR+
Sbjct: 110 EHMIMSAQAVLGNKWSVIAKLLPGRTDNAIKNHWNSNLRRK 150

[Close]
BLAST of CsaV3_5G010280 vs. Swiss-Prot
Match: sp|Q42575|MYB1_ARATH (Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 151.4 bits (381), Expect = 1.5e-35
Identity = 67/101 (66.34%), Postives = 78/101 (77.23%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KG WS +ED  L +LV++ G RNWS I+  IPGRSGKSCRLRWCNQL+P +    FT  E
Sbjct: 55  KGPWSKEEDDVLSELVKRLGARNWSFIARSIPGRSGKSCRLRWCNQLNPNLIRNSFTEVE 114

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRR 129
           D  I+ AHA+HGNKW+ IA+ LPGRTDNAIKNHWNS LRRR
Sbjct: 115 DQAIIAAHAIHGNKWAVIAKLLPGRTDNAIKNHWNSALRRR 155

[Close]
BLAST of CsaV3_5G010280 vs. TrEMBL
Match: tr|A0A0A0KQJ2|A0A0A0KQJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G209490 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.3e-111
Identity = 284/284 (100.00%), Postives = 284/284 (100.00%), Query Frame = 0 

Query: 1   MVLIGIAXXXXXXXXXXXXXXXXXXXXKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60
           MVLIGIAXXXXXXXXXXXXXXXXXXXXKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG
Sbjct: 1   MVLIGIAXXXXXXXXXXXXXXXXXXXXKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGG 180
           WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGG
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGG 180

Query: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESC 240
           EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESC
Sbjct: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESC 240

Query: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIXXXXXXXXXXXAQETP 285
           LATIMQRMIAQEVRNYIDSLRARGGLGIXXXXXXXXXXXAQETP
Sbjct: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIXXXXXXXXXXXAQETP 284

[Close]
BLAST of CsaV3_5G010280 vs. TrEMBL
Match: tr|A0A1S4E069|A0A1S4E069_CUCME (transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC107991324 PE=4 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 5.4e-102
Identity = 243/257 (94.55%), Postives = 247/257 (96.11%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPFTPAE
Sbjct: 29  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPAE 88

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 147
           DA+I+QAHAVHGNKWSTIAR LPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE
Sbjct: 89  DAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYE 148

Query: 148 VSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGGEPETSLRLSLPGEVVVAAEMDVKVKEE 207
           VSRSXXXXXXXXXXXXXX LKRTCF+RNSVGGGEPETSLRLSLPGEVVVAAEMDV+VKEE
Sbjct: 149 VSRSXXXXXXXXXXXXXXXLKRTCFNRNSVGGGEPETSLRLSLPGEVVVAAEMDVRVKEE 208

Query: 208 VTVESEXXXXXXXXXXXXXXXXXXXXXXVDESCLATIMQRMIAQEVRNYIDSLRARGGLG 267
           VTVE  XXXXXXXXXXXXXXXXXXXXXX     LATIMQRMIAQEVRNYIDSLRARGGLG
Sbjct: 209 VTVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATIMQRMIAQEVRNYIDSLRARGGLG 268

Query: 268 IXXXXXXXXXXXAQETP 285
           IXXXXXXXXXXXAQETP
Sbjct: 269 IXXXXXXXXXXXAQETP 285

[Close]
BLAST of CsaV3_5G010280 vs. TrEMBL
Match: tr|A0A067LKB3|A0A067LKB3_JATCU (MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_01234 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 3.5e-69
Identity = 163/241 (67.63%), Postives = 183/241 (75.93%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHRPF+PAE
Sbjct: 13  KGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHRPFSPAE 72

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADL---SSDSTAFLKRP 147
           DA+I+QAHA+HGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+L   SS++ + +KRP
Sbjct: 73  DAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSEANSVMKRP 132

Query: 148 SYEVSRSXXXXXXXXXXXXXXSLKRTCFDRNSVGGGEPETSLRLSLPGEVVVAAEMDVKV 207
             +VS  XXXXXXXXXXXXXX      FD    G  EPETSL LS PG+  V  E+  KV
Sbjct: 133 CLDVSTEXXXXXXXXXXXXXXXXXXXSFD-GEAGIVEPETSLTLSPPGDGFVRTEVGEKV 192

Query: 208 KEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVDESCLATIMQRMIAQEVRNYIDSLRARG 266
           KE      E          XXXXXXX     ++E+CL TIMQRMIA EVR+YID LR++ 
Sbjct: 193 KEVAVKGGEQDVDRQMVGEXXXXXXXTCGLQIEETCLLTIMQRMIATEVRSYIDRLRSKN 252

[Close]
BLAST of CsaV3_5G010280 vs. TrEMBL
Match: tr|V4T705|V4T705_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032317mg PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 163/256 (63.67%), Postives = 185/256 (72.27%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE
Sbjct: 27  KGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 86

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDS----TAFLKR 147
           D++I+QAHAVHGNKW+TIARSLPGRTDNAIKNHWNSTLRR+R A+LSS S    +  +KR
Sbjct: 87  DSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAELSSASSESNSVMMKR 146

Query: 148 PSYEVSRSXXXXXXXXXXXXXXSLKRTCF------DRNSVGGG--EPETSLRLSLPGE-V 207
           P +E + S               +KR C       D  +V  G   PET L LS PGE V
Sbjct: 147 PGFENNIS-----SAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPETLLTLSPPGESV 206

Query: 208 VVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVD----ESCLATIMQRMIA 267
           V+      KV++E  ++   XXXXXXXXXXXXXXX      VD    ESCL TIM+RMIA
Sbjct: 207 VLGGSGGEKVEDEEKLKINKXXXXXXXXXXXXXXXGEDRCTVDMEMEESCLFTIMRRMIA 266

[Close]
BLAST of CsaV3_5G010280 vs. TrEMBL
Match: tr|A0A2H5NLC4|A0A2H5NLC4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_052080 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.6e-66
Identity = 163/256 (63.67%), Postives = 185/256 (72.27%), Query Frame = 0 

Query: 28  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 87
           KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE
Sbjct: 27  KGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQLSPTVQHRPFTPAE 86

Query: 88  DALILQAHAVHGNKWSTIARSLPGRTDNAIKNHWNSTLRRRRDADLSSDS----TAFLKR 147
           D++I+QAHAVHGNKW+TIARSLPGRTDNAIKNHWNSTLRR+R A+LSS S    +  +KR
Sbjct: 87  DSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAELSSASSESNSVMMKR 146

Query: 148 PSYEVSRSXXXXXXXXXXXXXXSLKRTCF------DRNSVGGG--EPETSLRLSLPGE-V 207
           P +E + S               +KR C       D  +V  G   PET L LS PGE V
Sbjct: 147 PGFENNIS-----SAESDSDSGGIKRQCLRVSQEHDSYNVEAGIVGPETLLTLSPPGESV 206

Query: 208 VVAAEMDVKVKEEVTVESEXXXXXXXXXXXXXXXXXXXXXXVD----ESCLATIMQRMIA 267
           V+      KV++E  ++   XXXXXXXXXXXXXXX      VD    ESCL TIM+RMIA
Sbjct: 207 VLGGSGGEKVEDEEKLKINKXXXXXXXXXXXXXXXGEDRCTVDMEMEESCLFTIMRRMIA 266

The following BLAST results are available for this feature:
BLAST of CsaV3_5G010280 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004148201.11.9e-111100.00PREDICTED: transcription factor MYB44-like [Cucumis sativus] >KGN50672.1 hypothe... [more]
XP_016901632.18.2e-10294.55PREDICTED: transcription factor MYB44-like [Cucumis melo][more]
XP_023526760.16.7e-8874.81transcription factor MYB73-like [Cucurbita pepo subsp. pepo][more]
XP_022996289.16.1e-8165.15transcription factor MYB44-like [Cucurbita maxima][more]
XP_022941657.11.4e-8068.18transcription factor MYB44-like [Cucurbita moschata][more]
BLAST of CsaV3_5G010280 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G23290.19.8e-4174.26myb domain protein 70[more]
AT3G55730.19.8e-4171.29myb domain protein 109[more]
AT4G37260.19.8e-4172.28myb domain protein 73[more]
AT5G67300.16.4e-4070.30myb domain protein r1[more]
AT3G50060.11.1e-3970.30myb domain protein 77[more]
BLAST of CsaV3_5G010280 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23160|MYB73_ARATH1.8e-3972.28Transcription factor MYB73 OS=Arabidopsis thaliana OX=3702 GN=MYB73 PE=1 SV=1[more]
sp|Q9FDW1|MYB44_ARATH1.1e-3870.30Transcription factor MYB44 OS=Arabidopsis thaliana OX=3702 GN=MYB44 PE=1 SV=1[more]
sp|Q9SN12|MYB77_ARATH2.0e-3870.30Transcription factor MYB77 OS=Arabidopsis thaliana OX=3702 GN=MYB77 PE=1 SV=1[more]
sp|O04192|MYB25_ARATH2.4e-3666.34Transcription factor MYB25 OS=Arabidopsis thaliana OX=3702 GN=MYB25 PE=2 SV=1[more]
sp|Q42575|MYB1_ARATH1.5e-3566.34Transcription factor MYB1 OS=Arabidopsis thaliana OX=3702 GN=MYB1 PE=2 SV=1[more]
BLAST of CsaV3_5G010280 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KQJ2|A0A0A0KQJ2_CUCSA1.3e-111100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G209490 PE=4 SV=1[more]
tr|A0A1S4E069|A0A1S4E069_CUCME5.4e-10294.55transcription factor MYB44-like OS=Cucumis melo OX=3656 GN=LOC107991324 PE=4 SV=... [more]
tr|A0A067LKB3|A0A067LKB3_JATCU3.5e-6967.63MYB family protein OS=Jatropha curcas OX=180498 GN=JCGZ_01234 PE=4 SV=1[more]
tr|V4T705|V4T705_9ROSI1.6e-6663.67Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10032317mg PE=4 ... [more]
tr|A0A2H5NLC4|A0A2H5NLC4_CITUN1.6e-6663.67Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_052080 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf
IPR017930Myb_dom
IPR001005SANT/Myb
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function GO:0044212 transcription regulatory region DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G010280.1CsaV3_5G010280.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 27..76
e-value: 5.6E-16
score: 69.1
coord: 79..127
e-value: 1.3E-14
score: 64.6
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 28..73
e-value: 1.9E-18
score: 66.3
coord: 82..124
e-value: 1.1E-14
score: 54.2
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 82..125
e-value: 9.96356E-12
score: 57.5854
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 30..72
e-value: 1.61272E-14
score: 64.9042
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 82..143
e-value: 3.6E-20
score: 73.5
NoneNo IPR availableGENE3DG3DSA:1.10.10.60coord: 27..80
e-value: 8.2E-22
score: 78.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 144..186
NoneNo IPR availablePANTHERPTHR10641:SF553SUBFAMILY NOT NAMEDcoord: 21..263
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 21..263
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 23..78
score: 26.674
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 79..129
score: 21.468
IPR009057Homeobox-like domain superfamilySUPERFAMILYSSF46689Homeodomain-likecoord: 25..121

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsaV3_5G010280CSPI05G10810Wild cucumber (PI 183967)cpicucB285
CsaV3_5G010280Cucsa.368410Cucumber (Gy14) v1cgycucB560
CsaV3_5G010280CmaCh04G001450Cucurbita maxima (Rimu)cmacucB0883
CsaV3_5G010280CmoCh04G001420Cucurbita moschata (Rifu)cmocucB0873
CsaV3_5G010280Cp4.1LG01g05420Cucurbita pepo (Zucchini)cpecucB0542
CsaV3_5G010280CsGy5G008140Cucumber (Gy14) v2cgybcucB232
CsaV3_5G010280Carg18378Silver-seed gourdcarcucB0105
CsaV3_5G010280Cla004362Watermelon (97103) v1cucwmB410
CsaV3_5G010280ClCG07G004340Watermelon (Charleston Gray)cucwcgB422
CsaV3_5G010280Lsi04G010910Bottle gourd (USVL1VR-Ls)cuclsiB394
CsaV3_5G010280MELO3C034442.2Melon (DHL92) v3.6.1cucmedB377
CsaV3_5G010280Cla97C07G132800Watermelon (97103) v2cucwmbB407
CsaV3_5G010280Bhi07G000492Wax gourdcucwgoB524
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_5G010280Cucumber (Chinese Long) v3cuccucB205
CsaV3_5G010280Silver-seed gourdcarcucB0369
CsaV3_5G010280Silver-seed gourdcarcucB0708
CsaV3_5G010280Cucumber (Gy14) v2cgybcucB294
CsaV3_5G010280Cucumber (Gy14) v1cgycucB208
CsaV3_5G010280Cucurbita maxima (Rimu)cmacucB0884
CsaV3_5G010280Cucurbita maxima (Rimu)cmacucB0664
CsaV3_5G010280Cucurbita maxima (Rimu)cmacucB0739
CsaV3_5G010280Cucurbita moschata (Rifu)cmocucB0649
CsaV3_5G010280Cucurbita moschata (Rifu)cmocucB0728
CsaV3_5G010280Cucurbita moschata (Rifu)cmocucB0872
CsaV3_5G010280Cucurbita pepo (Zucchini)cpecucB0541
CsaV3_5G010280Cucurbita pepo (Zucchini)cpecucB0914
CsaV3_5G010280Wild cucumber (PI 183967)cpicucB360
CsaV3_5G010280Bottle gourd (USVL1VR-Ls)cuclsiB359
CsaV3_5G010280Melon (DHL92) v3.5.1cucmeB383
CsaV3_5G010280Watermelon (Charleston Gray)cucwcgB404
CsaV3_5G010280Watermelon (97103) v1cucwmB456
CsaV3_5G010280Watermelon (97103) v2cucwmbB385
CsaV3_5G010280Wax gourdcucwgoB506