CmoCh04G001420 (gene) Cucurbita moschata (Rifu)

NameCmoCh04G001420
Typegene
OrganismCucurbita moschata (Cucurbita moschata (Rifu))
DescriptionMyb domain protein 73
LocationCmo_Chr04 : 735124 .. 735966 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCTAATCGGAATTCCCCTCGCAAATCGAACCAGCAACAGTAACAGTGTTCGAATTAAAGGATCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTGGAGGAACACGGCCCCAGAAATTGGTCTTTGATCAGTACTGGAATTCCTGGTCGCTCTGGCAAATCCTGCCGTTTGCGCTGGTGTAATCAGCTCAGTCCGGCGGTTCAGCACCGTCCGTTCACGCCGGCGGAGGACTCTCTGATTGTTCAGGCGCACGCCGTCCACGGTAACAAGTGGTCCACGATTGCTCGACTCTTGCCTGGTCGGACCGACAATGCGATTAAGAATCACTGGAACTCGACGCTCAGGCGCCGCCGCGATGCCGATTTTTCTTCCGATTCCACGGCGTTTATGAAGCGGCCGAGTTGTGAAGTTTCGAGATCGGCGTCGGATGATGATGATGATTCGGAAGGATCGTTCAAACGGAGGTGCTTTGGAATGGCTGTGGAGCGGAACGGCGGCGGAGAAGGAGAAGGAGAAGGACCGGAGACGTCGCTGAGGCTGTCATTGCCGGGGGAGGTGGTGGTGCCGGCGGCGTGTGTCAAGGTGAAAGAGGAGGTGACAGTGGATAGCGAGGAGAACGATGGACGGCGTCATGTGACGGTGGCGGCGACGGCGGAGGAGAAAGGGAACCGGAAAAGGGAAATGGACGAGAGTTGTATGGCAACGATAATGCAGAGGATGATTGCTCGGGAGGTCCGAAATTACATAGACAGTTTACGGGCCCATGGTGGGCTTTCAATTGGGCCTAATATTGGGCCTGGGCTGGATTCAGGAGTCCAAGATACTGAGTAA

mRNA sequence

ATGGTTCTAATCGGAATTCCCCTCGCAAATCGAACCAGCAACAGTAACAGTGTTCGAATTAAAGGATCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTGGAGGAACACGGCCCCAGAAATTGGTCTTTGATCAGTACTGGAATTCCTGGTCGCTCTGGCAAATCCTGCCGTTTGCGCTGGTGTAATCAGCTCAGTCCGGCGGTTCAGCACCGTCCGTTCACGCCGGCGGAGGACTCTCTGATTGTTCAGGCGCACGCCGTCCACGGTAACAAGTGGTCCACGATTGCTCGACTCTTGCCTGGTCGGACCGACAATGCGATTAAGAATCACTGGAACTCGACGCTCAGGCGCCGCCGCGATGCCGATTTTTCTTCCGATTCCACGGCGTTTATGAAGCGGCCGAGTTGTGAAGTTTCGAGATCGGCGTCGGATGATGATGATGATTCGGAAGGATCGTTCAAACGGAGGTGCTTTGGAATGGCTGTGGAGCGGAACGGCGGCGGAGAAGGAGAAGGAGAAGGACCGGAGACGTCGCTGAGGCTGTCATTGCCGGGGGAGGTGGTGGTGCCGGCGGCGTGTGTCAAGGTGAAAGAGGAGGTGACAGTGGATAGCGAGGAGAACGATGGACGGCGTCATGTGACGGTGGCGGCGACGGCGGAGGAGAAAGGGAACCGGAAAAGGGAAATGGACGAGAGTTGTATGGCAACGATAATGCAGAGGATGATTGCTCGGGAGGTCCGAAATTACATAGACAGTTTACGGGCCCATGGTGGGCTTTCAATTGGGCCTAATATTGGGCCTGGGCTGGATTCAGGAGTCCAAGATACTGAGTAA

Coding sequence (CDS)

ATGGTTCTAATCGGAATTCCCCTCGCAAATCGAACCAGCAACAGTAACAGTGTTCGAATTAAAGGATCGTGGAGTCCTCAAGAGGACGCTACCTTAATCAAATTGGTGGAGGAACACGGCCCCAGAAATTGGTCTTTGATCAGTACTGGAATTCCTGGTCGCTCTGGCAAATCCTGCCGTTTGCGCTGGTGTAATCAGCTCAGTCCGGCGGTTCAGCACCGTCCGTTCACGCCGGCGGAGGACTCTCTGATTGTTCAGGCGCACGCCGTCCACGGTAACAAGTGGTCCACGATTGCTCGACTCTTGCCTGGTCGGACCGACAATGCGATTAAGAATCACTGGAACTCGACGCTCAGGCGCCGCCGCGATGCCGATTTTTCTTCCGATTCCACGGCGTTTATGAAGCGGCCGAGTTGTGAAGTTTCGAGATCGGCGTCGGATGATGATGATGATTCGGAAGGATCGTTCAAACGGAGGTGCTTTGGAATGGCTGTGGAGCGGAACGGCGGCGGAGAAGGAGAAGGAGAAGGACCGGAGACGTCGCTGAGGCTGTCATTGCCGGGGGAGGTGGTGGTGCCGGCGGCGTGTGTCAAGGTGAAAGAGGAGGTGACAGTGGATAGCGAGGAGAACGATGGACGGCGTCATGTGACGGTGGCGGCGACGGCGGAGGAGAAAGGGAACCGGAAAAGGGAAATGGACGAGAGTTGTATGGCAACGATAATGCAGAGGATGATTGCTCGGGAGGTCCGAAATTACATAGACAGTTTACGGGCCCATGGTGGGCTTTCAATTGGGCCTAATATTGGGCCTGGGCTGGATTCAGGAGTCCAAGATACTGAGTAA
BLAST of CmoCh04G001420 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 9.1e-41
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 1

Query: 19  RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTP 78
           RIKG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF+ 
Sbjct: 4   RIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSA 63

Query: 79  AEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
            ED  I +AHA  GNKW+TIARLL GRTDNA+KNHWNSTL+R+
Sbjct: 64  EEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

BLAST of CmoCh04G001420 vs. Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 4.2e-30
Identity = 64/134 (47.76%), Postives = 84/134 (62.69%), Query Frame = 1

Query: 20  IKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTPA 79
           +KG W  +EDA L++LV + GP+ WS I+  IPGR GK CR RW N LSP V+   +TP 
Sbjct: 276 VKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPGRIGKQCRERWFNHLSPEVRKTNWTPE 335

Query: 80  EDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDSTAFMKRPSC 139
           ED +I+ AHA  GNKW+ I+++L GR  NAIKNHWNSTL ++   D  S           
Sbjct: 336 EDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKIGGDSKS----------- 395

Query: 140 EVSRSASDDDDDSE 154
            +++   DDDDD E
Sbjct: 396 -LNKEKDDDDDDDE 397

BLAST of CmoCh04G001420 vs. Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.2e-30
Identity = 53/113 (46.90%), Postives = 82/113 (72.57%), Query Frame = 1

Query: 16  NSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   +KG WS +ED T+I LVE++GP+ WS IS  +PGR GK CR RW N L+P +    
Sbjct: 82  NPELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHLNPGINKNA 141

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSS 129
           +T  E+  +++AH ++GNKW+ + + LPGR+DN+IKNHWNS+++++ D+ ++S
Sbjct: 142 WTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYAS 194

BLAST of CmoCh04G001420 vs. Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.2e-30
Identity = 58/106 (54.72%), Postives = 79/106 (74.53%), Query Frame = 1

Query: 16  NSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   IKG W+ +ED  +I+LV+++GP+ WSLI+  + GR GK CR RW N L+P V+   
Sbjct: 82  NPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSS 141

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +T AED +I +AH   GN+W+ IA+LLPGRTDN+IKNHWNST+RR+
Sbjct: 142 WTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187

BLAST of CmoCh04G001420 vs. Swiss-Prot
Match: MYB_CHICK (Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 9.4e-30
Identity = 58/106 (54.72%), Postives = 78/106 (73.58%), Query Frame = 1

Query: 16  NSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRP 75
           N   IKG W+ +ED  +I+LV+++GP+ WS+I+  + GR GK CR RW N L+P V+   
Sbjct: 87  NPELIKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTS 146

Query: 76  FTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
           +T  ED +I QAH   GN+W+ IA+LLPGRTDNAIKNHWNST+RR+
Sbjct: 147 WTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192

BLAST of CmoCh04G001420 vs. TrEMBL
Match: A0A0A0KQJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 1.2e-116
Identity = 228/291 (78.35%), Postives = 244/291 (83.85%), Query Frame = 1

Query: 1   MVLIGIPLANRTSNSNSV-------RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPG 60
           MVLIGI L N  +N+NS        R+KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSP VQHRPFTPAED+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADFSSDSTAFMKRPSCEVSRSASD----DDDDSEGSFKRRCFGMAVERNG 180
           WNSTLRRRRDAD SSDSTAF+KRPS EVSRSASD    DDDDSE S KR CF    +RN 
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCF----DRNS 180

Query: 181 GGEGEGEGPETSLRLSLPGEVVVPAAC-VKVKEEVTVDSEENDGRRHVTVAATAEEKGNR 240
            G GE   PETSLRLSLPGEVVV A   VKVKEEVTV+SE+NDGRR V VAA  EEKGNR
Sbjct: 181 VGGGE---PETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRV-VAAAEEEKGNR 240

Query: 241 KREMDESCMATIMQRMIAREVRNYIDSLRAHGGLSIGPNIGPGLDSGVQDT 280
           K+E+DESC+ATIMQRMIA+EVRNYIDSLRA GGL IGP +GPGLD   Q+T
Sbjct: 241 KKEVDESCLATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQET 283

BLAST of CmoCh04G001420 vs. TrEMBL
Match: V4T705_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 5.7e-74
Identity = 159/266 (59.77%), Postives = 190/266 (71.43%), Query Frame = 1

Query: 10  NRTSNSNSV---RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQ 69
           N ++NSNS    RIKGSWSPQEDATLIKLVE+HGPRNWS+IS+GIPGRSGKSCRLRWCNQ
Sbjct: 13  NNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQ 72

Query: 70  LSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF 129
           LSP VQHRPFTPAEDS+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+ 
Sbjct: 73  LSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAEL 132

Query: 130 SSDS----TAFMKRPSCEVSRSASDDDDDSEGSFKRRCFGMAVERNGGGEGEG-EGPETS 189
           SS S    +  MKRP  E + S+++ D DS G  KR+C  ++ E +      G  GPET 
Sbjct: 133 SSASSESNSVMMKRPGFENNISSAESDSDS-GGIKRQCLRVSQEHDSYNVEAGIVGPETL 192

Query: 190 LRLSLPGEVVVPAAC----VKVKEEVTVDSE-ENDGRRHVTVAATAEEKGNRKREMDESC 249
           L LS PGE VV        V+ +E++ ++ E + DG          E++     EM+ESC
Sbjct: 193 LTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDRCTVDMEMEESC 252

Query: 250 MATIMQRMIAREVRNYIDSLRAHGGL 263
           + TIM+RMIA EVRN  D LRA  GL
Sbjct: 253 LFTIMRRMIAEEVRNQFDGLRAQAGL 277

BLAST of CmoCh04G001420 vs. TrEMBL
Match: A0A067LKB3_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1)

HSP 1 Score: 283.5 bits (724), Expect = 2.8e-73
Identity = 154/259 (59.46%), Postives = 183/259 (70.66%), Query Frame = 1

Query: 13  SNSNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQ 72
           S   + RIKGSWSPQEDA LIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQ
Sbjct: 5   SGCGADRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQ 64

Query: 73  HRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF---SSD 132
           HRPF+PAED++IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+    SS+
Sbjct: 65  HRPFSPAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSE 124

Query: 133 STAFMKRPSCEVSRSASDDDDDSEGSFKRRCFGMAVERNG-GGEGEGEGPETSLRLSLPG 192
           + + MKRP  +VS      +  SE   KR+C G   E +   GE     PETSL LS PG
Sbjct: 125 ANSVMKRPCLDVS-----TESGSESGVKRQCLGAPPEDSSFDGEAGIVEPETSLTLSPPG 184

Query: 193 EVVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIARE 252
           +  V     +  +EV V   E D  R +      EE+     +++E+C+ TIMQRMIA E
Sbjct: 185 DGFVRTEVGEKVKEVAVKGGEQDVDRQMVGEEEEEEEETCGLQIEETCLLTIMQRMIATE 244

Query: 253 VRNYIDSLRAHGGLSIGPN 268
           VR+YID LR+  G + GPN
Sbjct: 245 VRSYIDRLRSKNGFA-GPN 257

BLAST of CmoCh04G001420 vs. TrEMBL
Match: B9SQP6_RICCO (R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0838620 PE=4 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 1.5e-71
Identity = 155/255 (60.78%), Postives = 181/255 (70.98%), Query Frame = 1

Query: 15  SNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHR 74
           S+S RIKGSWSPQEDA LIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHR
Sbjct: 10  SSSERIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHR 69

Query: 75  PFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF---SSDST 134
           PFTP ED++IVQAHAVHGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+F   SS+S 
Sbjct: 70  PFTPDEDAVIVQAHAVHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRIAEFSSASSESN 129

Query: 135 AFMKRPSCE-VSRSASDDDDDSEGSFKRRCFG----MAVERNGGGEGEGEGPETSLRLSL 194
           + +KR S +  S S S+   DS  + KR+C G           GG+ +   PET L LS 
Sbjct: 130 SAIKRLSLDGDSESDSESGSDSAAAAKRQCLGGSGCTEDSSFNGGDAKVVEPETLLTLSP 189

Query: 195 PGEVVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIA 254
           PG+  V AA   + E+   + EE      V V     + G   RE +ESC+ TIM++MIA
Sbjct: 190 PGDGFVTAAAA-IGEKTEEEEEE------VEVVKGGGDNGRLVREEEESCLLTIMRKMIA 249

Query: 255 REVRNYIDSLRAHGG 262
            EVRNY+D LRA  G
Sbjct: 250 VEVRNYVDRLRAQDG 257

BLAST of CmoCh04G001420 vs. TrEMBL
Match: B9HHT0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07100g PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 2.9e-70
Identity = 149/256 (58.20%), Postives = 179/256 (69.92%), Query Frame = 1

Query: 14  NSNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQH 73
           N    RIKGSWSPQEDATLIKLVE+HGPRNWS+ISTGIPGRSGKSCRLRWCNQLSP VQH
Sbjct: 5   NGGDHRIKGSWSPQEDATLIKLVEQHGPRNWSMISTGIPGRSGKSCRLRWCNQLSPEVQH 64

Query: 74  RPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRD--ADFSSDST 133
           RPFTPAED+ IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R   +  SS+S 
Sbjct: 65  RPFTPAEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSSASSESN 124

Query: 134 AFMKRPSCEVSRSASDDDDDSEGSFKRRCFGMAVERNG-GGEGEGEGPETSLRLSLPGE- 193
           +  KR + EVS  +   + +S+   KR+C   +   N   G+   +GPETSL LS PG+ 
Sbjct: 125 SVFKRSTLEVSVVS---ESESDSGSKRQCLHASPGHNSVNGDVGVDGPETSLTLSPPGDG 184

Query: 194 VVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIAREV 253
            V  A   K+KE V V+  E D    +   A   EK     EMDE C+  ++Q++I  EV
Sbjct: 185 FVSMAVAEKLKEGVAVNGREKDLGESIMKDA---EKIRCTEEMDEDCVRALIQKIIQEEV 244

Query: 254 RNYIDSLRAHGGLSIG 266
           R Y D L+   G++IG
Sbjct: 245 RIYFDRLKTRNGVTIG 254

BLAST of CmoCh04G001420 vs. TAIR10
Match: AT2G23290.1 (AT2G23290.1 myb domain protein 70)

HSP 1 Score: 171.0 bits (432), Expect = 1.0e-42
Identity = 118/275 (42.91%), Postives = 143/275 (52.00%), Query Frame = 1

Query: 19  RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTP 78
           RIKG WSP+ED  L  LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP V+HR FT 
Sbjct: 11  RIKGPWSPEEDDLLQSLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVEHRGFTA 70

Query: 79  AEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDSTAFMKRPS 138
            ED  I+ AHA  GNKW+TIARLL GRTDNAIKNHWNSTL+R+     S       +  S
Sbjct: 71  EEDDTIILAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK----CSGGGGGGEEGQS 130

Query: 139 CEVSRSASDDDD-DSEGSFKRRCFG-------MAVERNGGGEGE-GEGPETSLRLSLPGE 198
           C+   +   D +   E   KRR  G        A+   G    E  +   + L +S    
Sbjct: 131 CDFGGNGGYDGNLTDEKPLKRRASGGGGVVVVTALSPTGSDVSEQSQSSGSVLPVSSSCH 190

Query: 199 VVVPAACV--KVKEEVTVDSEEND-------GRRHVTVAATAEEKGNRKREMDE------ 258
           V  P A     V E  + + EE D           V  + T  E    KRE +E      
Sbjct: 191 VFKPTARAGGVVIESSSPEEEEKDPMTCLRLSLPWVNESTTPPELFPVKREEEEEKEREI 250

Query: 259 ----SCMATIMQRMIAREVRNYIDSLRAHGGLSIG 266
                   T++Q MI  EVR+Y+  L+   G   G
Sbjct: 251 SGLGGDFMTVVQEMIKTEVRSYMADLQLGNGGGAG 281

BLAST of CmoCh04G001420 vs. TAIR10
Match: AT3G55730.1 (AT3G55730.1 myb domain protein 109)

HSP 1 Score: 169.9 bits (429), Expect = 2.3e-42
Identity = 73/103 (70.87%), Postives = 87/103 (84.47%), Query Frame = 1

Query: 19  RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTP 78
           ++KG WS +EDA L KLV + GPRNWSLI+ GIPGRSGKSCRLRWCNQL P ++ +PF+ 
Sbjct: 54  KVKGPWSTEEDAVLTKLVRKLGPRNWSLIARGIPGRSGKSCRLRWCNQLDPCLKRKPFSD 113

Query: 79  AEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
            ED +I+ AHAVHGNKW+ IA+LL GRTDNAIKNHWNSTLRR+
Sbjct: 114 EEDRMIISAHAVHGNKWAVIAKLLTGRTDNAIKNHWNSTLRRK 156

BLAST of CmoCh04G001420 vs. TAIR10
Match: AT4G37260.1 (AT4G37260.1 myb domain protein 73)

HSP 1 Score: 169.1 bits (427), Expect = 3.9e-42
Identity = 103/238 (43.28%), Postives = 133/238 (55.88%), Query Frame = 1

Query: 13  SNSNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQ 72
           +  N  RIKG WSP+ED  L +LV++HGPRNWSLIS  IPGRSGKSCRLRWCNQLSP V+
Sbjct: 5   TRKNMERIKGPWSPEEDDLLQRLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPEVE 64

Query: 73  HRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADFSSDSTA 132
           HR F+  ED  I++AHA  GNKW+TI+RLL GRTDNAIKNHWNSTL+R+           
Sbjct: 65  HRAFSQEEDETIIRAHARFGNKWATISRLLNGRTDNAIKNHWNSTLKRK----------C 124

Query: 133 FMKRPSCEVSRSASDDDD-DSEGSFKRRCFGMAVERNGGG--------EGEGEGPETSLR 192
            ++  SC+   +   D +   E   KR   G      GGG         G   G + S +
Sbjct: 125 SVEGQSCDFGGNGGYDGNLGEEQPLKRTASG------GGGVSTGLYMSPGSPSGSDVSEQ 184

Query: 193 LSLPGEVVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIM 242
            S    V  P     V+ EVT  S   D   +++++    ++  R  E  +    T+M
Sbjct: 185 SSGGAHVFKPT----VRSEVTASSSGEDPPTYLSLSLPWTDETVRVNEPVQLNQNTVM 222

BLAST of CmoCh04G001420 vs. TAIR10
Match: AT5G67300.1 (AT5G67300.1 myb domain protein r1)

HSP 1 Score: 168.7 bits (426), Expect = 5.1e-42
Identity = 74/103 (71.84%), Postives = 87/103 (84.47%), Query Frame = 1

Query: 19  RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTP 78
           RIKG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP V+HRPF+ 
Sbjct: 4   RIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSA 63

Query: 79  AEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
            ED  I +AHA  GNKW+TIARLL GRTDNA+KNHWNSTL+R+
Sbjct: 64  EEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

BLAST of CmoCh04G001420 vs. TAIR10
Match: AT3G50060.1 (AT3G50060.1 myb domain protein 77)

HSP 1 Score: 168.3 bits (425), Expect = 6.7e-42
Identity = 74/103 (71.84%), Postives = 86/103 (83.50%), Query Frame = 1

Query: 19  RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHRPFTP 78
           R+KG WS +ED  L ++VE++GPRNWS IS  IPGRSGKSCRLRWCNQLSP V+HRPF+P
Sbjct: 4   RVKGPWSQEEDEQLRRMVEKYGPRNWSAISKSIPGRSGKSCRLRWCNQLSPEVEHRPFSP 63

Query: 79  AEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 122
            ED  IV A A  GNKW+TIARLL GRTDNA+KNHWNSTL+R+
Sbjct: 64  EEDETIVTARAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK 106

BLAST of CmoCh04G001420 vs. NCBI nr
Match: gi|449460939|ref|XP_004148201.1| (PREDICTED: transcription factor MYB44-like [Cucumis sativus])

HSP 1 Score: 427.6 bits (1098), Expect = 1.7e-116
Identity = 228/291 (78.35%), Postives = 244/291 (83.85%), Query Frame = 1

Query: 1   MVLIGIPLANRTSNSNSV-------RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPG 60
           MVLIGI L N  +N+NS        R+KGSWSPQEDATLIKLVE+HGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSP VQHRPFTPAED+LI+QAHAVHGNKWSTIAR LPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADFSSDSTAFMKRPSCEVSRSASD----DDDDSEGSFKRRCFGMAVERNG 180
           WNSTLRRRRDAD SSDSTAF+KRPS EVSRSASD    DDDDSE S KR CF    +RN 
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCF----DRNS 180

Query: 181 GGEGEGEGPETSLRLSLPGEVVVPAAC-VKVKEEVTVDSEENDGRRHVTVAATAEEKGNR 240
            G GE   PETSLRLSLPGEVVV A   VKVKEEVTV+SE+NDGRR V VAA  EEKGNR
Sbjct: 181 VGGGE---PETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRV-VAAAEEEKGNR 240

Query: 241 KREMDESCMATIMQRMIAREVRNYIDSLRAHGGLSIGPNIGPGLDSGVQDT 280
           K+E+DESC+ATIMQRMIA+EVRNYIDSLRA GGL IGP +GPGLD   Q+T
Sbjct: 241 KKEVDESCLATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQET 283

BLAST of CmoCh04G001420 vs. NCBI nr
Match: gi|567886500|ref|XP_006435772.1| (hypothetical protein CICLE_v10032317mg [Citrus clementina])

HSP 1 Score: 285.8 bits (730), Expect = 8.1e-74
Identity = 159/266 (59.77%), Postives = 190/266 (71.43%), Query Frame = 1

Query: 10  NRTSNSNSV---RIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQ 69
           N ++NSNS    RIKGSWSPQEDATLIKLVE+HGPRNWS+IS+GIPGRSGKSCRLRWCNQ
Sbjct: 13  NNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCNQ 72

Query: 70  LSPAVQHRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF 129
           LSP VQHRPFTPAEDS+I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+ 
Sbjct: 73  LSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAEL 132

Query: 130 SSDS----TAFMKRPSCEVSRSASDDDDDSEGSFKRRCFGMAVERNGGGEGEG-EGPETS 189
           SS S    +  MKRP  E + S+++ D DS G  KR+C  ++ E +      G  GPET 
Sbjct: 133 SSASSESNSVMMKRPGFENNISSAESDSDS-GGIKRQCLRVSQEHDSYNVEAGIVGPETL 192

Query: 190 LRLSLPGEVVVPAAC----VKVKEEVTVDSE-ENDGRRHVTVAATAEEKGNRKREMDESC 249
           L LS PGE VV        V+ +E++ ++ E + DG          E++     EM+ESC
Sbjct: 193 LTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDRCTVDMEMEESC 252

Query: 250 MATIMQRMIAREVRNYIDSLRAHGGL 263
           + TIM+RMIA EVRN  D LRA  GL
Sbjct: 253 LFTIMRRMIAEEVRNQFDGLRAQAGL 277

BLAST of CmoCh04G001420 vs. NCBI nr
Match: gi|802547651|ref|XP_012090668.1| (PREDICTED: transcriptional activator Myb-like [Jatropha curcas])

HSP 1 Score: 283.5 bits (724), Expect = 4.0e-73
Identity = 154/259 (59.46%), Postives = 183/259 (70.66%), Query Frame = 1

Query: 13  SNSNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQ 72
           S   + RIKGSWSPQEDA LIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQ
Sbjct: 5   SGCGADRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQ 64

Query: 73  HRPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF---SSD 132
           HRPF+PAED++IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+    SS+
Sbjct: 65  HRPFSPAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSE 124

Query: 133 STAFMKRPSCEVSRSASDDDDDSEGSFKRRCFGMAVERNG-GGEGEGEGPETSLRLSLPG 192
           + + MKRP  +VS      +  SE   KR+C G   E +   GE     PETSL LS PG
Sbjct: 125 ANSVMKRPCLDVS-----TESGSESGVKRQCLGAPPEDSSFDGEAGIVEPETSLTLSPPG 184

Query: 193 EVVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIARE 252
           +  V     +  +EV V   E D  R +      EE+     +++E+C+ TIMQRMIA E
Sbjct: 185 DGFVRTEVGEKVKEVAVKGGEQDVDRQMVGEEEEEEEETCGLQIEETCLLTIMQRMIATE 244

Query: 253 VRNYIDSLRAHGGLSIGPN 268
           VR+YID LR+  G + GPN
Sbjct: 245 VRSYIDRLRSKNGFA-GPN 257

BLAST of CmoCh04G001420 vs. NCBI nr
Match: gi|255574816|ref|XP_002528315.1| (PREDICTED: myb-related protein 340 [Ricinus communis])

HSP 1 Score: 277.7 bits (709), Expect = 2.2e-71
Identity = 155/255 (60.78%), Postives = 181/255 (70.98%), Query Frame = 1

Query: 15  SNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQHR 74
           S+S RIKGSWSPQEDA LIKLVE+HGPRNWSLISTGIPGRSGKSCRLRWCNQLSP VQHR
Sbjct: 10  SSSERIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHR 69

Query: 75  PFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADF---SSDST 134
           PFTP ED++IVQAHAVHGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+F   SS+S 
Sbjct: 70  PFTPDEDAVIVQAHAVHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRIAEFSSASSESN 129

Query: 135 AFMKRPSCE-VSRSASDDDDDSEGSFKRRCFG----MAVERNGGGEGEGEGPETSLRLSL 194
           + +KR S +  S S S+   DS  + KR+C G           GG+ +   PET L LS 
Sbjct: 130 SAIKRLSLDGDSESDSESGSDSAAAAKRQCLGGSGCTEDSSFNGGDAKVVEPETLLTLSP 189

Query: 195 PGEVVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIA 254
           PG+  V AA   + E+   + EE      V V     + G   RE +ESC+ TIM++MIA
Sbjct: 190 PGDGFVTAAAA-IGEKTEEEEEE------VEVVKGGGDNGRLVREEEESCLLTIMRKMIA 249

Query: 255 REVRNYIDSLRAHGG 262
            EVRNY+D LRA  G
Sbjct: 250 VEVRNYVDRLRAQDG 257

BLAST of CmoCh04G001420 vs. NCBI nr
Match: gi|224098716|ref|XP_002311241.1| (hypothetical protein POPTR_0008s07100g [Populus trichocarpa])

HSP 1 Score: 273.5 bits (698), Expect = 4.2e-70
Identity = 149/256 (58.20%), Postives = 179/256 (69.92%), Query Frame = 1

Query: 14  NSNSVRIKGSWSPQEDATLIKLVEEHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPAVQH 73
           N    RIKGSWSPQEDATLIKLVE+HGPRNWS+ISTGIPGRSGKSCRLRWCNQLSP VQH
Sbjct: 5   NGGDHRIKGSWSPQEDATLIKLVEQHGPRNWSMISTGIPGRSGKSCRLRWCNQLSPEVQH 64

Query: 74  RPFTPAEDSLIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRD--ADFSSDST 133
           RPFTPAED+ IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R   +  SS+S 
Sbjct: 65  RPFTPAEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSSASSESN 124

Query: 134 AFMKRPSCEVSRSASDDDDDSEGSFKRRCFGMAVERNG-GGEGEGEGPETSLRLSLPGE- 193
           +  KR + EVS  +   + +S+   KR+C   +   N   G+   +GPETSL LS PG+ 
Sbjct: 125 SVFKRSTLEVSVVS---ESESDSGSKRQCLHASPGHNSVNGDVGVDGPETSLTLSPPGDG 184

Query: 194 VVVPAACVKVKEEVTVDSEENDGRRHVTVAATAEEKGNRKREMDESCMATIMQRMIAREV 253
            V  A   K+KE V V+  E D    +   A   EK     EMDE C+  ++Q++I  EV
Sbjct: 185 FVSMAVAEKLKEGVAVNGREKDLGESIMKDA---EKIRCTEEMDEDCVRALIQKIIQEEV 244

Query: 254 RNYIDSLRAHGGLSIG 266
           R Y D L+   G++IG
Sbjct: 245 RIYFDRLKTRNGVTIG 254

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
MYB44_ARATH9.1e-4171.84Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1[more]
MYBQ_DICDI4.2e-3047.76Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1[more]
MB3R1_ARATH7.2e-3046.90Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1[more]
MYBA_CHICK7.2e-3054.72Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1[more]
MYB_CHICK9.4e-3054.72Transcriptional activator Myb OS=Gallus gallus GN=MYB PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0KQJ2_CUCSA1.2e-11678.35Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1[more]
V4T705_9ROSI5.7e-7459.77Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1[more]
A0A067LKB3_JATCU2.8e-7359.46MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1[more]
B9SQP6_RICCO1.5e-7160.78R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_0838620 PE=4... [more]
B9HHT0_POPTR2.9e-7058.20Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07100g PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT2G23290.11.0e-4242.91 myb domain protein 70[more]
AT3G55730.12.3e-4270.87 myb domain protein 109[more]
AT4G37260.13.9e-4243.28 myb domain protein 73[more]
AT5G67300.15.1e-4271.84 myb domain protein r1[more]
AT3G50060.16.7e-4271.84 myb domain protein 77[more]
Match NameE-valueIdentityDescription
gi|449460939|ref|XP_004148201.1|1.7e-11678.35PREDICTED: transcription factor MYB44-like [Cucumis sativus][more]
gi|567886500|ref|XP_006435772.1|8.1e-7459.77hypothetical protein CICLE_v10032317mg [Citrus clementina][more]
gi|802547651|ref|XP_012090668.1|4.0e-7359.46PREDICTED: transcriptional activator Myb-like [Jatropha curcas][more]
gi|255574816|ref|XP_002528315.1|2.2e-7160.78PREDICTED: myb-related protein 340 [Ricinus communis][more]
gi|224098716|ref|XP_002311241.1|4.2e-7058.20hypothetical protein POPTR_0008s07100g [Populus trichocarpa][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR009057Homeobox-like_sf
IPR017930Myb_dom
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
biological_process GO:0030154 cell differentiation
biological_process GO:0006357 regulation of transcription from RNA polymerase II promoter
cellular_component GO:0005575 cellular_component
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
molecular_function GO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0001135 transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function GO:0044212 transcription regulatory region DNA binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmoCh04G001420.1CmoCh04G001420.1mRNA


Analysis Name: InterPro Annotations of Cucurbita moschata
Date Performed: 2017-05-19
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainPFAMPF00249Myb_DNA-bindingcoord: 75..117
score: 8.8E-15coord: 21..66
score: 1.6
IPR001005SANT/Myb domainSMARTSM00717santcoord: 72..120
score: 1.2E-14coord: 20..69
score: 2.8
IPR009057Homeodomain-likeGENE3DG3DSA:1.10.10.60coord: 22..74
score: 2.1E-24coord: 75..121
score: 5.3
IPR009057Homeodomain-likeunknownSSF46689Homeodomain-likecoord: 20..114
score: 2.58
IPR017930Myb domainPROFILEPS51294HTH_MYBcoord: 16..71
score: 25.567coord: 72..122
score: 21
NoneNo IPR availablePANTHERPTHR10641MYB-LIKE DNA-BINDING PROTEIN MYBcoord: 1..121
score: 9.2
NoneNo IPR availablePANTHERPTHR10641:SF553SUBFAMILY NOT NAMEDcoord: 1..121
score: 9.2

The following gene(s) are paralogous to this gene:

None