Cla004362 (gene) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Cla004362
Type	gene
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	MYB transcription factor (AHRD V1 -* B4FMQ3_MAIZE); contains Interpro domain(s) IPR015495 Myb transcription factor
Location	Chr7 : 5095273 .. 5096094 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTTTGATCGGAATCGCTCTCCCAAATCACAACAATAATTCAAATACTAACACTACTAATAATAATCGAGTTAAGGGATCATGGAGTCCTCAAGAGGATGCTACCTTAATCAAATTGGTTGAACAACACGGTCCTAGAAACTGGTCTTTGATCAGTACTGGAATTCCTGGCCGTTCCGGCAAGTCCTGCCGTTTGCGGTGGTGTAATCAGCTCAGTCCGGCGGATCGTCCATTTACACCGGCGGAGGACGCTGTGATTGTTCAAGCACACGCTGTTCACGGTAACAAATGGTCCACCATTGCTCGCTTATTGCCTGGCCGGACTGACAATGCGATTAAGAATCATTGGAATTCGACGCTCAGGCGCCGTCGTGATGCCGATTTGTCGTCTGATTCGACGGCGTTTTTGAAGCGGCCGAGTTACGAAGTTTCTAGATCAGCGTCGGATGATGATGATAATGATGATGATGATTCGGTAGCCTCGTTGAAACGGAAGTGCTTTGAACGGGACGGCGGAGGAGGACCGGAGACGTCGCTGAGACTGTCGCTGCCGGGAGAGGTCGTGGTGCCGACGGCGGTGGATATGAAAGTGAAAGAGGAGGTGACTGTGGAGAGCGAAAAGAACGACGGACGGCAACGCGTGACGGCGGCAGCGGATGAGAAAAGGAATCGGAAAAGGGAGGTGGATGAGACTTGTTTGGCAACGATAATGCAGAGGATGATAGCCCAGGAAGTTAGAAATTACATAGACAGTTTGCGGGCCCATGGTGGGCTTGGGATTGGGCCTGGGCTGGATCCTACAGTCCAAGAGACTCCATAG

mRNA sequence

ATGGTTTTGATCGGAATCGCTCTCCCAAATCACAACAATAATTCAAATACTAACACTACTAATAATAATCGAGTTAAGGGATCATGGAGTCCTCAAGAGGATGCTACCTTAATCAAATTGGTTGAACAACACGGTCCTAGAAACTGGTCTTTGATCAGTACTGGAATTCCTGGCCGTTCCGGCAAGTCCTGCCGTTTGCGGTGGTGTAATCAGCTCAGTCCGGCGGATCGTCCATTTACACCGGCGGAGGACGCTGTGATTGTTCAAGCACACGCTGTTCACGGTAACAAATGGTCCACCATTGCTCGCTTATTGCCTGGCCGGACTGACAATGCGATTAAGAATCATTGGAATTCGACGCTCAGGCGCCGTCGTGATGCCGATTTGTCGTCTGATTCGACGGCGTTTTTGAAGCGGCCGAGTTACGAAGTTTCTAGATCAGCGTCGGATGATGATGATAATGATGATGATGATTCGGTAGCCTCGTTGAAACGGAAGTGCTTTGAACGGGACGGCGGAGGAGGACCGGAGACGTCGCTGAGACTGTCGCTGCCGGGAGAGGTCGTGGTGCCGACGGCGGTGGATATGAAAGTGAAAGAGGAGGTGACTGTGGAGAGCGAAAAGAACGACGGACGGCAACGCGTGACGGCGGCAGCGGATGAGAAAAGGAATCGGAAAAGGGAGGTGGATGAGACTTGTTTGGCAACGATAATGCAGAGGATGATAGCCCAGGAAGTTAGAAATTACATAGACAGTTTGCGGGCCCATGGTGGGCTTGGGATTGGGCCTGGGCTGGATCCTACAGTCCAAGAGACTCCATAG

Coding sequence (CDS)

ATGGTTTTGATCGGAATCGCTCTCCCAAATCACAACAATAATTCAAATACTAACACTACTAATAATAATCGAGTTAAGGGATCATGGAGTCCTCAAGAGGATGCTACCTTAATCAAATTGGTTGAACAACACGGTCCTAGAAACTGGTCTTTGATCAGTACTGGAATTCCTGGCCGTTCCGGCAAGTCCTGCCGTTTGCGGTGGTGTAATCAGCTCAGTCCGGCGGATCGTCCATTTACACCGGCGGAGGACGCTGTGATTGTTCAAGCACACGCTGTTCACGGTAACAAATGGTCCACCATTGCTCGCTTATTGCCTGGCCGGACTGACAATGCGATTAAGAATCATTGGAATTCGACGCTCAGGCGCCGTCGTGATGCCGATTTGTCGTCTGATTCGACGGCGTTTTTGAAGCGGCCGAGTTACGAAGTTTCTAGATCAGCGTCGGATGATGATGATAATGATGATGATGATTCGGTAGCCTCGTTGAAACGGAAGTGCTTTGAACGGGACGGCGGAGGAGGACCGGAGACGTCGCTGAGACTGTCGCTGCCGGGAGAGGTCGTGGTGCCGACGGCGGTGGATATGAAAGTGAAAGAGGAGGTGACTGTGGAGAGCGAAAAGAACGACGGACGGCAACGCGTGACGGCGGCAGCGGATGAGAAAAGGAATCGGAAAAGGGAGGTGGATGAGACTTGTTTGGCAACGATAATGCAGAGGATGATAGCCCAGGAAGTTAGAAATTACATAGACAGTTTGCGGGCCCATGGTGGGCTTGGGATTGGGCCTGGGCTGGATCCTACAGTCCAAGAGACTCCATAG

Protein sequence

MVLIGIALPNHNNNSNTNTTNNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPADRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCFERDGGGGPETSLRLSLPGEVVVPTAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNRKREVDETCLATIMQRMIAQEVRNYIDSLRAHGGLGIGPGLDPTVQETP

Homology

[Close]

BLAST of Cla004362 vs. Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 9.1e-38
Identity = 107/285 (37.54%), Postives = 140/285 (49.12%), Query Frame = 1


Query: 23  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPFT 82
           +R+KG WSP+ED  L +LV ++GPRNW++IS  IPGRSGKSCRLRWCNQLSP    RPF+
Sbjct: 3   DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFS 62

Query: 83  PAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR------RDADLSSDST 142
             ED  I +AHA  GNKW+TIARLL GRTDNA+KNHWNSTL+R+      R  D S D  
Sbjct: 63  AEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRKCGGYDHRGYDGSEDHR 122

Query: 143 AFLKRPS---------YEVSRSASDDDDNDDDDSVASLKR----KCFERDG--------- 202
              +  S           +S  +    D  D  ++  L      K   R G         
Sbjct: 123 PVKRSVSAGSPPVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAVVLPLPIE 182

Query: 203 ----GGGPETSLRLSLPGEVVVPTAVDMKVKEEV-TVESEKNDGRQRVT--------AAA 262
                  P TSL LSLPG  V   +        +    S +++    V+          A
Sbjct: 183 TSSSSDDPPTSLSLSLPGADVSEESNRSHESTNINNTTSSRHNHNNTVSFMPFSGGFRGA 242

Query: 263 DEKRNRKREVDETCLATIMQRMIAQEVRNYIDSLRAHGGLGIGPG 265
            E+  +    +      ++Q MI  EVR+Y+  ++ + G G   G
Sbjct: 243 IEEMGKSFPGNGGEFMAVVQEMIKAEVRSYMTEMQRNNGGGFVGG 287

[Close]

BLAST of Cla004362 vs. Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 7.0e-30
Identity = 68/149 (45.64%), Postives = 89/149 (59.73%), Query Frame = 1


Query: 13  NNSNTNTTNNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQL 72
           +  N   ++   VKG W  +EDA L++LV + GP+ WS I+  IPGR GK CR RW N L
Sbjct: 264 SKDNGKPSSPGIVKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPGRIGKQCRERWFNHL 323

Query: 73  SPADRP--FTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADLS 132
           SP  R   +TP ED +I+ AHA  GNKW+ I+++L GR  NAIKNHWNSTL ++    + 
Sbjct: 324 SPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKK----IG 383

Query: 133 SDSTAFLKRPSYEVSRSASDDDDNDDDDS 160
            DS +  K           DDDD+DD+D+
Sbjct: 384 GDSKSLNKE---------KDDDDDDDEDA 399

HSP 2 Score: 29.3 bits (64), Expect = 8.4e+01
Identity = 12/35 (34.29%), Postives = 15/35 (42.86%), Query Frame = 1


Query: 10  NHNNNSNTNTTNNNRVKGSWSPQEDATLIKLVEQH 45
           N+NNN+N N  NNN      +P   A+    +  H
Sbjct: 834 NNNNNNNNNNNNNNNNNNIPTPNMSASTTGTINHH 868

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BLAST of Cla004362 vs. Swiss-Prot
Match: MB3R1_ARATH (Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.9e-28
Identity = 60/147 (40.82%), Postives = 91/147 (61.90%), Query Frame = 1


Query: 21  NNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPA--DRP 80
           N   VKG WS +ED T+I LVE++GP+ WS IS  +PGR GK CR RW N L+P      
Sbjct: 82  NPELVKGPWSKEEDNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHLNPGINKNA 141

Query: 81  FTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADLSS------D 140
           +T  E+  +++AH ++GNKW+ + + LPGR+DN+IKNHWNS+++++ D+  +S       
Sbjct: 142 WTQEEELTLIRAHQIYGNKWAELMKFLPGRSDNSIKNHWNSSVKKKLDSYYASGLLDQCQ 201

Query: 141 STAFLKRPSYEVSRSASDDDDNDDDDS 160
           S+  +   +  ++ S+S    N D+ S
Sbjct: 202 SSPLIALQNKSIASSSSWMHSNGDEGS 228

HSP 2 Score: 65.9 bits (159), Expect = 8.1e-10
Identity = 35/99 (35.35%), Postives = 49/99 (49.49%), Query Frame = 1


Query: 26  KGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPFTPAE 85
           KG W+P+ED  L K VE+   +NW  I+     R+   C  RW   L+P     P++  E
Sbjct: 35  KGQWTPEEDEVLCKAVERFQGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEE 94

Query: 86  DAVIVQAHAVHG-NKWSTIARLLPGRTDNAIKNHWNSTL 122
           D  I+     +G  KWSTI++ LPGR     +  W++ L
Sbjct: 95  DNTIIDLVEKYGPKKWSTISQHLPGRIGKQCRERWHNHL 133

[Close]

BLAST of Cla004362 vs. Swiss-Prot
Match: MYBA_DICDI (Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=3 SV=2)

HSP 1 Score: 126.7 bits (317), Expect = 3.8e-28
Identity = 62/134 (46.27%), Postives = 85/134 (63.43%), Query Frame = 1


Query: 23  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPFT 82
           N VKG+W+  ED  +I+LV+ +GP+ WS I+  + GR GK CR RW N L+P      ++
Sbjct: 198 NLVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHNHLNPNIKKEAWS 257

Query: 83  PAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADLSSDSTAFLKRP 142
             ED +I   HA+HGNKW+ IA+ LPGRTDNAIKNHWNS+++R       S++   LK  
Sbjct: 258 DEEDQIIRDQHAIHGNKWAEIAKFLPGRTDNAIKNHWNSSMKR------VSNNNVHLKSH 317

Query: 143 SYEVSRSASDDDDN 155
           + E S S+ D+ D+
Sbjct: 318 AIEHSLSSQDNQDS 325

HSP 2 Score: 71.2 bits (173), Expect = 1.9e-11
Identity = 44/145 (30.34%), Postives = 64/145 (44.14%), Query Frame = 1


Query: 10  NHNNNSNTNTTNN-------NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGK 69
           N NNN N+N +NN        + KG W+ +ED  LIK V  H  +NW  I+   P R+  
Sbjct: 126 NINNNGNSNISNNNTPKVEKKKTKGKWTSEEDQILIKAVNLHNQKNWKKIAEHFPDRTDV 185

Query: 70  SCRLRWCNQLSP--ADRPFTPAEDAVIVQAHAVHG-NKWSTIARLLPGRTDNAIKNHWNS 129
            C  R+   L P      +T  ED  +++    +G  KWS IA  L GR     +  W++
Sbjct: 186 QCHHRYQKVLHPNLVKGAWTKDEDDKVIELVKTYGPKKWSDIALHLKGRMGKQCRERWHN 245

Query: 130 TLRRRRDADLSSDSTAFLKRPSYEV 145
            L      +  SD    + R  + +
Sbjct: 246 HLNPNIKKEAWSDEEDQIIRDQHAI 270

[Close]

BLAST of Cla004362 vs. Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 8.6e-28
Identity = 57/106 (53.77%), Postives = 76/106 (71.70%), Query Frame = 1


Query: 21  NNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPADRP-- 80
           N   +KG W+ +ED  +I+LV+++GP+ WSLI+  + GR GK CR RW N L+P  +   
Sbjct: 82  NPELIKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSS 141

Query: 81  FTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRR 125
           +T AED VI +AH   GN+W+ IA+LLPGRTDN+IKNHWNST+RR+
Sbjct: 142 WTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187

[Close]

BLAST of Cla004362 vs. TrEMBL
Match: A0A0A0KQJ2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 7.6e-132
Identity = 245/284 (86.27%), Postives = 257/284 (90.49%), Query Frame = 1


Query: 1   MVLIGIALPNHNNNSNTNTTNNN--RVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60
           MVLIGIALPNHNNN+N+N  NNN  RVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPA--DRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSP    RPFTPAEDA+I+QAHAVHGNKWSTIAR LPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCFERD--GGG 180
           WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDS ASLKR CF+R+  GGG
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCFDRNSVGGG 180

Query: 181 GPETSLRLSLPGEVVVPTAVDMKVKEEVTVESEKNDGRQRVTAAA-DEKRNRKREVDETC 240
            PETSLRLSLPGEVVV   +D+KVKEEVTVESEKNDGR+RV AAA +EK NRK+EVDE+C
Sbjct: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC 240

Query: 241 LATIMQRMIAQEVRNYIDSLRAHGGLGI----GPGLDPTVQETP 274
           LATIMQRMIAQEVRNYIDSLRA GGLGI    GPGLDP  QETP
Sbjct: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP 284

[Close]

BLAST of Cla004362 vs. TrEMBL
Match: V4T705_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 6.1e-73
Identity = 153/271 (56.46%), Postives = 193/271 (71.22%), Query Frame = 1


Query: 11  HNNNSNTNTTNNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCN 70
           +NN++N+N+ NN+R+KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGRSGKSCRLRWCN
Sbjct: 12  NNNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCN 71

Query: 71  QLSPA--DRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDAD 130
           QLSP    RPFTPAED++I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+
Sbjct: 72  QLSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAE 131

Query: 131 LSSDS----TAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCF----ERD------GGG 190
           LSS S    +  +KRP +E + S+++ D +        +KR+C     E D      G  
Sbjct: 132 LSSASSESNSVMMKRPGFENNISSAESDSDS-----GGIKRQCLRVSQEHDSYNVEAGIV 191

Query: 191 GPETSLRLSLPGE-VVVPTAVDMKVKEEVTVESEK-----NDGRQRVTAAADEKRNRKRE 250
           GPET L LS PGE VV+  +   KV++E  ++  K      DG +      +++     E
Sbjct: 192 GPETLLTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDRCTVDME 251

Query: 251 VDETCLATIMQRMIAQEVRNYIDSLRAHGGL 260
           ++E+CL TIM+RMIA+EVRN  D LRA  GL
Sbjct: 252 MEESCLFTIMRRMIAEEVRNQFDGLRAQAGL 277

[Close]

BLAST of Cla004362 vs. TrEMBL
Match: A0A067LKB3_JATCU (MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 1.2e-71
Identity = 154/260 (59.23%), Postives = 181/260 (69.62%), Query Frame = 1


Query: 23  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPFT 82
           +R+KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP    RPF+
Sbjct: 10  DRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHRPFS 69

Query: 83  PAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADL---SSDSTAFL 142
           PAEDA+IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+L   SS++ + +
Sbjct: 70  PAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSEANSVM 129

Query: 143 KRPSYEVSRSASDDDDNDDDDSVASLKRKCF-------ERDGGGG---PETSLRLSLPGE 202
           KRP  +VS          +  S + +KR+C          DG  G   PETSL LS PG+
Sbjct: 130 KRPCLDVS---------TESGSESGVKRQCLGAPPEDSSFDGEAGIVEPETSLTLSPPGD 189

Query: 203 VVVPTAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNR-KREVDETCLATIMQRMIAQEV 262
             V T V  KVKE      E++  RQ V    +E+      +++ETCL TIMQRMIA EV
Sbjct: 190 GFVRTEVGEKVKEVAVKGGEQDVDRQMVGEEEEEEEETCGLQIEETCLLTIMQRMIATEV 249

Query: 263 RNYIDSLRAHGGLGIGPGLD 267
           R+YID LR+  G   GP  D
Sbjct: 250 RSYIDRLRSKNGFA-GPNAD 259

[Close]

BLAST of Cla004362 vs. TrEMBL
Match: F6HCB3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01360 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 9.7e-71
Identity = 151/262 (57.63%), Postives = 181/262 (69.08%), Query Frame = 1


Query: 17  TNTTNNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP-- 76
           T TT  +R+KGSWSPQEDA+L+KLVE+HGPRNWSLIS GIPGRSGKSCRLRWCNQLSP  
Sbjct: 2   TLTTGGDRIKGSWSPQEDASLVKLVEEHGPRNWSLISAGIPGRSGKSCRLRWCNQLSPEV 61

Query: 77  ADRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADL---SS 136
             RPF+PAEDAVIVQAHAVHGNKW+TIAR+LPGRTDNAIKNHWNSTLRRRR  +L   SS
Sbjct: 62  QHRPFSPAEDAVIVQAHAVHGNKWATIARILPGRTDNAIKNHWNSTLRRRRVGELSSASS 121

Query: 137 DSTAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCFERDGGGGPETSLRLSLPGEVVVP 196
           +S + +KRPS++ + S+  D         AS +    +R     PETSL LS PG+ VV 
Sbjct: 122 ESNSAMKRPSFDATVSSESDSGLKRQLVGASPEHNSCDR-VKAEPETSLTLSPPGDSVVT 181

Query: 197 TAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNRKREVDETCLATIMQRMIAQEVRNYID 256
             V  +V+       +  D   R+T    E+     E+ +TCL  I+QRMIA+EVRNY  
Sbjct: 182 LPVGDRVE-------DARDEGARITRKEGER--CAVEMADTCLVKIIQRMIAEEVRNYFI 241

Query: 257 SLRAHGGLGIGPGLDPTVQETP 274
           +LRA  GL + P LDP  Q  P
Sbjct: 242 ALRAEDGLRVRPELDPAAQNNP 253

[Close]

BLAST of Cla004362 vs. TrEMBL
Match: B9HHT0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07100g PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 2.7e-68
Identity = 144/255 (56.47%), Postives = 173/255 (67.84%), Query Frame = 1


Query: 22  NNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPF 81
           ++R+KGSWSPQEDATLIKLVEQHGPRNWS+ISTGIPGRSGKSCRLRWCNQLSP    RPF
Sbjct: 8   DHRIKGSWSPQEDATLIKLVEQHGPRNWSMISTGIPGRSGKSCRLRWCNQLSPEVQHRPF 67

Query: 82  TPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRD--ADLSSDSTAFL 141
           TPAEDA IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R   +  SS+S +  
Sbjct: 68  TPAEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSSASSESNSVF 127

Query: 142 KRPSYEVSRSASDDDDNDDDDSVASLKRKCFERDGG----------GGPETSLRLSLPGE 201
           KR + EVS  +  + D+         KR+C     G           GPETSL LS PG+
Sbjct: 128 KRSTLEVSVVSESESDSGS-------KRQCLHASPGHNSVNGDVGVDGPETSLTLSPPGD 187

Query: 202 VVVPTAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNRKREVDETCLATIMQRMIAQEVR 261
             V  AV  K+KE V V   + D  + +   A EK     E+DE C+  ++Q++I +EVR
Sbjct: 188 GFVSMAVAEKLKEGVAVNGREKDLGESIMKDA-EKIRCTEEMDEDCVRALIQKIIQEEVR 247

Query: 262 NYIDSLRAHGGLGIG 263
            Y D L+   G+ IG
Sbjct: 248 IYFDRLKTRNGVTIG 254

[Close]

BLAST of Cla004362 vs. NCBI nr
Match: gi|449460939|ref|XP_004148201.1| (PREDICTED: transcription factor MYB44-like [Cucumis sativus])

HSP 1 Score: 478.0 bits (1229), Expect = 1.1e-131
Identity = 245/284 (86.27%), Postives = 257/284 (90.49%), Query Frame = 1


Query: 1   MVLIGIALPNHNNNSNTNTTNNN--RVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60
           MVLIGIALPNHNNN+N+N  NNN  RVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG
Sbjct: 1   MVLIGIALPNHNNNTNSNNNNNNHNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPG 60

Query: 61  RSGKSCRLRWCNQLSPA--DRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNH 120
           RSGKSCRLRWCNQLSP    RPFTPAEDA+I+QAHAVHGNKWSTIAR LPGRTDNAIKNH
Sbjct: 61  RSGKSCRLRWCNQLSPTVQHRPFTPAEDALILQAHAVHGNKWSTIARSLPGRTDNAIKNH 120

Query: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCFERD--GGG 180
           WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDS ASLKR CF+R+  GGG
Sbjct: 121 WNSTLRRRRDADLSSDSTAFLKRPSYEVSRSASDDDDNDDDDSEASLKRTCFDRNSVGGG 180

Query: 181 GPETSLRLSLPGEVVVPTAVDMKVKEEVTVESEKNDGRQRVTAAA-DEKRNRKREVDETC 240
            PETSLRLSLPGEVVV   +D+KVKEEVTVESEKNDGR+RV AAA +EK NRK+EVDE+C
Sbjct: 181 EPETSLRLSLPGEVVVAAEMDVKVKEEVTVESEKNDGRRRVVAAAEEEKGNRKKEVDESC 240

Query: 241 LATIMQRMIAQEVRNYIDSLRAHGGLGI----GPGLDPTVQETP 274
           LATIMQRMIAQEVRNYIDSLRA GGLGI    GPGLDP  QETP
Sbjct: 241 LATIMQRMIAQEVRNYIDSLRARGGLGIGPGVGPGLDPAAQETP 284

[Close]

BLAST of Cla004362 vs. NCBI nr
Match: gi|567886500|ref|XP_006435772.1| (hypothetical protein CICLE_v10032317mg [Citrus clementina])

HSP 1 Score: 282.3 bits (721), Expect = 8.8e-73
Identity = 153/271 (56.46%), Postives = 193/271 (71.22%), Query Frame = 1


Query: 11  HNNNSNTNTTNNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCN 70
           +NN++N+N+ NN+R+KGSWSPQEDATLIKLVEQHGPRNWS+IS+GIPGRSGKSCRLRWCN
Sbjct: 12  NNNSTNSNSNNNDRIKGSWSPQEDATLIKLVEQHGPRNWSMISSGIPGRSGKSCRLRWCN 71

Query: 71  QLSPA--DRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDAD 130
           QLSP    RPFTPAED++I+QAHAVHGNKW+TIAR LPGRTDNAIKNHWNSTLRR+R A+
Sbjct: 72  QLSPTVQHRPFTPAEDSIIIQAHAVHGNKWATIARSLPGRTDNAIKNHWNSTLRRKRMAE 131

Query: 131 LSSDS----TAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCF----ERD------GGG 190
           LSS S    +  +KRP +E + S+++ D +        +KR+C     E D      G  
Sbjct: 132 LSSASSESNSVMMKRPGFENNISSAESDSDS-----GGIKRQCLRVSQEHDSYNVEAGIV 191

Query: 191 GPETSLRLSLPGE-VVVPTAVDMKVKEEVTVESEK-----NDGRQRVTAAADEKRNRKRE 250
           GPET L LS PGE VV+  +   KV++E  ++  K      DG +      +++     E
Sbjct: 192 GPETLLTLSPPGESVVLGGSGGEKVEDEEKLKINKECDGDGDGGKIEKEKGEDRCTVDME 251

Query: 251 VDETCLATIMQRMIAQEVRNYIDSLRAHGGL 260
           ++E+CL TIM+RMIA+EVRN  D LRA  GL
Sbjct: 252 MEESCLFTIMRRMIAEEVRNQFDGLRAQAGL 277

[Close]

BLAST of Cla004362 vs. NCBI nr
Match: gi|802547651|ref|XP_012090668.1| (PREDICTED: transcriptional activator Myb-like [Jatropha curcas])

HSP 1 Score: 278.1 bits (710), Expect = 1.7e-71
Identity = 154/260 (59.23%), Postives = 181/260 (69.62%), Query Frame = 1


Query: 23  NRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPFT 82
           +R+KGSWSPQEDA LIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP    RPF+
Sbjct: 10  DRIKGSWSPQEDANLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSPEVQHRPFS 69

Query: 83  PAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADL---SSDSTAFL 142
           PAEDA+IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R A+L   SS++ + +
Sbjct: 70  PAEDAIIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRAAELSSASSEANSVM 129

Query: 143 KRPSYEVSRSASDDDDNDDDDSVASLKRKCF-------ERDGGGG---PETSLRLSLPGE 202
           KRP  +VS          +  S + +KR+C          DG  G   PETSL LS PG+
Sbjct: 130 KRPCLDVS---------TESGSESGVKRQCLGAPPEDSSFDGEAGIVEPETSLTLSPPGD 189

Query: 203 VVVPTAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNR-KREVDETCLATIMQRMIAQEV 262
             V T V  KVKE      E++  RQ V    +E+      +++ETCL TIMQRMIA EV
Sbjct: 190 GFVRTEVGEKVKEVAVKGGEQDVDRQMVGEEEEEEEETCGLQIEETCLLTIMQRMIATEV 249

Query: 263 RNYIDSLRAHGGLGIGPGLD 267
           R+YID LR+  G   GP  D
Sbjct: 250 RSYIDRLRSKNGFA-GPNAD 259

[Close]

BLAST of Cla004362 vs. NCBI nr
Match: gi|225448491|ref|XP_002272706.1| (PREDICTED: myb-related protein B [Vitis vinifera])

HSP 1 Score: 275.0 bits (702), Expect = 1.4e-70
Identity = 151/262 (57.63%), Postives = 181/262 (69.08%), Query Frame = 1


Query: 17  TNTTNNNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP-- 76
           T TT  +R+KGSWSPQEDA+L+KLVE+HGPRNWSLIS GIPGRSGKSCRLRWCNQLSP  
Sbjct: 2   TLTTGGDRIKGSWSPQEDASLVKLVEEHGPRNWSLISAGIPGRSGKSCRLRWCNQLSPEV 61

Query: 77  ADRPFTPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRDADL---SS 136
             RPF+PAEDAVIVQAHAVHGNKW+TIAR+LPGRTDNAIKNHWNSTLRRRR  +L   SS
Sbjct: 62  QHRPFSPAEDAVIVQAHAVHGNKWATIARILPGRTDNAIKNHWNSTLRRRRVGELSSASS 121

Query: 137 DSTAFLKRPSYEVSRSASDDDDNDDDDSVASLKRKCFERDGGGGPETSLRLSLPGEVVVP 196
           +S + +KRPS++ + S+  D         AS +    +R     PETSL LS PG+ VV 
Sbjct: 122 ESNSAMKRPSFDATVSSESDSGLKRQLVGASPEHNSCDR-VKAEPETSLTLSPPGDSVVT 181

Query: 197 TAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNRKREVDETCLATIMQRMIAQEVRNYID 256
             V  +V+       +  D   R+T    E+     E+ +TCL  I+QRMIA+EVRNY  
Sbjct: 182 LPVGDRVE-------DARDEGARITRKEGER--CAVEMADTCLVKIIQRMIAEEVRNYFI 241

Query: 257 SLRAHGGLGIGPGLDPTVQETP 274
           +LRA  GL + P LDP  Q  P
Sbjct: 242 ALRAEDGLRVRPELDPAAQNNP 253

[Close]

BLAST of Cla004362 vs. NCBI nr
Match: gi|224098716|ref|XP_002311241.1| (hypothetical protein POPTR_0008s07100g [Populus trichocarpa])

HSP 1 Score: 266.9 bits (681), Expect = 3.8e-68
Identity = 144/255 (56.47%), Postives = 173/255 (67.84%), Query Frame = 1


Query: 22  NNRVKGSWSPQEDATLIKLVEQHGPRNWSLISTGIPGRSGKSCRLRWCNQLSP--ADRPF 81
           ++R+KGSWSPQEDATLIKLVEQHGPRNWS+ISTGIPGRSGKSCRLRWCNQLSP    RPF
Sbjct: 8   DHRIKGSWSPQEDATLIKLVEQHGPRNWSMISTGIPGRSGKSCRLRWCNQLSPEVQHRPF 67

Query: 82  TPAEDAVIVQAHAVHGNKWSTIARLLPGRTDNAIKNHWNSTLRRRRD--ADLSSDSTAFL 141
           TPAEDA IVQAHA+HGNKW+TIARLLPGRTDNAIKNHWNSTLRR+R   +  SS+S +  
Sbjct: 68  TPAEDAKIVQAHAIHGNKWATIARLLPGRTDNAIKNHWNSTLRRKRGSVSSASSESNSVF 127

Query: 142 KRPSYEVSRSASDDDDNDDDDSVASLKRKCFERDGG----------GGPETSLRLSLPGE 201
           KR + EVS  +  + D+         KR+C     G           GPETSL LS PG+
Sbjct: 128 KRSTLEVSVVSESESDSGS-------KRQCLHASPGHNSVNGDVGVDGPETSLTLSPPGD 187

Query: 202 VVVPTAVDMKVKEEVTVESEKNDGRQRVTAAADEKRNRKREVDETCLATIMQRMIAQEVR 261
             V  AV  K+KE V V   + D  + +   A EK     E+DE C+  ++Q++I +EVR
Sbjct: 188 GFVSMAVAEKLKEGVAVNGREKDLGESIMKDA-EKIRCTEEMDEDCVRALIQKIIQEEVR 247

Query: 262 NYIDSLRAHGGLGIG 263
            Y D L+   G+ IG
Sbjct: 248 IYFDRLKTRNGVTIG 254

The following BLAST results are available for this feature:

BLAST of Cla004362 vs. Swiss-Prot


Match Name	E-value	Identity	Description
MYB44_ARATH	9.1e-38	37.54	Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1	[more]
MYBQ_DICDI	7.0e-30	45.64	Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1	[more]
MB3R1_ARATH	2.9e-28	40.82	Myb-related protein 3R-1 OS=Arabidopsis thaliana GN=MYB3R-1 PE=2 SV=1	[more]
MYBA_DICDI	3.8e-28	46.27	Myb-like protein A OS=Dictyostelium discoideum GN=mybA PE=3 SV=2	[more]
MYBA_CHICK	8.6e-28	53.77	Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1	[more]

BLAST of Cla004362 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KQJ2_CUCSA	7.6e-132	86.27	Uncharacterized protein OS=Cucumis sativus GN=Csa_5G209490 PE=4 SV=1	[more]
V4T705_9ROSI	6.1e-73	56.46	Uncharacterized protein OS=Citrus clementina GN=CICLE_v10032317mg PE=4 SV=1	[more]
A0A067LKB3_JATCU	1.2e-71	59.23	MYB family protein OS=Jatropha curcas GN=JCGZ_01234 PE=4 SV=1	[more]
F6HCB3_VITVI	9.7e-71	57.63	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_13s0067g01360 PE=4 SV=...	[more]
B9HHT0_POPTR	2.7e-68	56.47	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0008s07100g PE=4 SV=1	[more]

BLAST of Cla004362 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449460939\|ref\|XP_004148201.1\|	1.1e-131	86.27	PREDICTED: transcription factor MYB44-like [Cucumis sativus]	[more]
gi\|567886500\|ref\|XP_006435772.1\|	8.8e-73	56.46	hypothetical protein CICLE_v10032317mg [Citrus clementina]	[more]
gi\|802547651\|ref\|XP_012090668.1\|	1.7e-71	59.23	PREDICTED: transcriptional activator Myb-like [Jatropha curcas]	[more]
gi\|225448491\|ref\|XP_002272706.1\|	1.4e-70	57.63	PREDICTED: myb-related protein B [Vitis vinifera]	[more]
gi\|224098716\|ref\|XP_002311241.1\|	3.8e-68	56.47	hypothetical protein POPTR_0008s07100g [Populus trichocarpa]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001005	SANT/Myb
IPR009057	Homeobox-like_sf
IPR017930	Myb_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0030154	cell differentiation
biological_process	GO:0006357	regulation of transcription from RNA polymerase II promoter
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0000785	chromatin
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003682	chromatin binding
molecular_function	GO:0000981	RNA polymerase II transcription factor activity, sequence-specific DNA binding
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0001135	transcription factor activity, RNA polymerase II transcription factor recruiting
molecular_function	GO:0044212	transcription regulatory region DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Cla004362	Cla004362.1	mRNA

InterPro

Analysis Name: InterPro Annotations of watermelon (97103)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001005	SANT/Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 78..120 score: 9.5E-14coord: 26..71 score: 1.8
IPR001005	SANT/Myb domain	SMART	SM00717	sant	coord: 75..123 score: 2.6E-13coord: 25..74 score: 5.6
IPR009057	Homeodomain-like	GENE3D	G3DSA:1.10.10.60		coord: 78..122 score: 7.2E-21coord: 25..74 score: 7.4
IPR009057	Homeodomain-like	unknown	SSF46689	Homeodomain-like	coord: 23..117 score: 1.24
IPR017930	Myb domain	PROFILE	PS51294	HTH_MYB	coord: 77..125 score: 20.393coord: 21..76 score: 26
None	No IPR available	PANTHER	PTHR10641	MYB-LIKE DNA-BINDING PROTEIN MYB	coord: 1..124 score: 6.4E-78coord: 164..171 score: 6.4
None	No IPR available	PANTHER	PTHR10641:SF553	SUBFAMILY NOT NAMED	coord: 164..171 score: 6.4E-78coord: 1..124 score: 6.4

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Cla004362	Cla97C07G132800	Watermelon (97103) v2	wmwmbB167
Cla004362	Csa5G209490	Cucumber (Chinese Long) v2	cuwmB387
Cla004362	ClCG07G004340	Watermelon (Charleston Gray)	wcgwmB365
Cla004362	CSPI05G10810	Wild cucumber (PI 183967)	cpiwmB395
Cla004362	Cucsa.368410	Cucumber (Gy14) v1	cgywmB669
Cla004362	CmaCh04G001450	Cucurbita maxima (Rimu)	cmawmB691
Cla004362	CmoCh04G001420	Cucurbita moschata (Rifu)	cmowmB685
Cla004362	Lsi04G010910	Bottle gourd (USVL1VR-Ls)	lsiwmB306
Cla004362	CsGy5G008140	Cucumber (Gy14) v2	cgybwmB359
Cla004362	MELO3C034442.2	Melon (DHL92) v3.6.1	medwmB058
Cla004362	Carg18378	Silver-seed gourd	carwmB0086
Cla004362	CsaV3_5G010280	Cucumber (Chinese Long) v3	cucwmB410
Cla004362	Bhi07G000492	Wax gourd	wgowmB548

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Cla004362	Melon (DHL92) v3.6.1	medwmB093
Cla004362	Silver-seed gourd	carwmB0324
Cla004362	Silver-seed gourd	carwmB0667
Cla004362	Cucumber (Chinese Long) v3	cucwmB515
Cla004362	Watermelon (97103) v2	wmwmbB157
Cla004362	Wax gourd	wgowmB370
Cla004362	Watermelon (97103) v1	wmwmB110
Cla004362	Cucumber (Gy14) v1	cgywmB242
Cla004362	Cucurbita maxima (Rimu)	cmawmB519
Cla004362	Cucurbita maxima (Rimu)	cmawmB561
Cla004362	Cucurbita maxima (Rimu)	cmawmB690
Cla004362	Cucurbita moschata (Rifu)	cmowmB509
Cla004362	Cucurbita moschata (Rifu)	cmowmB554
Cla004362	Cucurbita moschata (Rifu)	cmowmB684
Cla004362	Melon (DHL92) v3.5.1	mewmB057
Cla004362	Watermelon (Charleston Gray)	wcgwmB189
Cla004362	Cucumber (Chinese Long) v2	cuwmB490
Cla004362	Cucurbita pepo (Zucchini)	cpewmB417
Cla004362	Cucurbita pepo (Zucchini)	cpewmB418
Cla004362	Cucurbita pepo (Zucchini)	cpewmB696
Cla004362	Bottle gourd (USVL1VR-Ls)	lsiwmB057